Miyakogusa Predicted Gene

Lj0g3v0354489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0354489.1 Non Characterized Hit- tr|A0YLE4|A0YLE4_LYNSP
Putative uncharacterized protein OS=Lyngbya sp.
(strai,24.92,1e-18,seg,NULL;
Bestrophin,Bestrophin/UPF0187,CUFF.24410.1
         (408 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g031000.1 | bestrophin-like protein | HC | chr8:11557715-1...   443   e-124

>Medtr8g031000.1 | bestrophin-like protein | HC |
           chr8:11557715-11553545 | 20130731
          Length = 334

 Score =  443 bits (1139), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/334 (69%), Positives = 257/334 (76%), Gaps = 2/334 (0%)

Query: 77  MYKNRALYAHSDWRTXXXXXXXXXXXXXXXXXXVILSLXXXXXXXXXXXXXISAYNSAVX 136
           M KNR LY H++W T                  VILSL             I+AYNSAV 
Sbjct: 1   MQKNRTLYNHTNWVTHRSSLRHVRHFFSSFSSRVILSLVPPVLFFTSFAAVIAAYNSAVW 60

Query: 137 XXXXXXXXXXXRASTLPYQLTAPALALLLVFRTEASYSRYVEGKKAWTMVLAGAHDFARQ 196
                      RAS+LPYQLTAPALALLLVFRTEASYSR+VEGKKAWT V+A A DFAR 
Sbjct: 61  FHYLPEFFPVLRASSLPYQLTAPALALLLVFRTEASYSRFVEGKKAWTAVIAAASDFARL 120

Query: 197 VMAFAD--APSDFSLKKALLRYIIAFPLALKCHVLYGSDIRRDLQHLLDVDDLAVIMNSK 254
           VMA  D     DF +KK LL YIIAFP+ LKCHVLYGSD+ RDLQHLL+VDD+A+IM S 
Sbjct: 121 VMATVDVSGKGDFQVKKELLNYIIAFPIVLKCHVLYGSDVERDLQHLLEVDDIALIMKSN 180

Query: 255 HPPRCIIEFISQSIRLLKLEDSRRNVLQSKITCFLEGIGICEQLMGIPIPLSYTRLTSRF 314
           H PRC IEFISQSIRLLKLEDSRR++L+SKITCF EGIG+CEQL+GIPIPLSYTRLTSRF
Sbjct: 181 HRPRCTIEFISQSIRLLKLEDSRRSILESKITCFHEGIGLCEQLLGIPIPLSYTRLTSRF 240

Query: 315 LVLWHLTLPIILWDDCQWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDDLCKKAQND 374
           LVLWHLTLPIILWDDC WIVVPATFISAASLFCIEEVGVLIE+PFPMLAL+DLC+KAQ D
Sbjct: 241 LVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEDPFPMLALNDLCQKAQKD 300

Query: 375 IQEAIAAENSIHVHLVAKQNRHAIKPSPNGKPNS 408
           IQEAIA EN IH HLVAK+N H+ + SPNG P+S
Sbjct: 301 IQEAIATENVIHAHLVAKRNYHSKEHSPNGWPSS 334