Miyakogusa Predicted Gene
- Lj0g3v0354459.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0354459.1 Non Characterized Hit- tr|F6HHK2|F6HHK2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.06,0.0000003,Glyco_hydro_28,Glycoside hydrolase, family 28;
Parallel beta-helix repeats,Parallel beta-helix repea,CUFF.24404.1
(239 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g030930.1 | polygalacturonase/glycoside hydrolase family p... 343 9e-95
Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family p... 315 3e-86
Medtr5g063430.1 | polygalacturonase/glycoside hydrolase family p... 245 3e-65
Medtr2g058670.1 | polygalacturonase 11c, putative | HC | chr2:24... 220 1e-57
Medtr2g058840.1 | polygalacturonase 11c, putative | HC | chr2:24... 219 1e-57
Medtr2g058640.1 | polygalacturonase 11c, putative | HC | chr2:24... 211 5e-55
Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-2485865... 202 3e-52
Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-3939047... 194 6e-50
Medtr1g052315.1 | endo polygalacturonase | HC | chr1:21186740-21... 190 8e-49
Medtr5g097860.1 | polygalacturonase | HC | chr5:42842979-4284475... 189 2e-48
Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family p... 189 2e-48
Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 ... 187 5e-48
Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-4452318... 182 2e-46
Medtr2g435640.1 | polygalacturonase | HC | chr2:13796366-1379143... 181 5e-46
Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-4988630... 178 3e-45
Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-3252202... 178 5e-45
Medtr2g049400.1 | pectin lyase superfamily protein | LC | chr2:2... 174 7e-44
Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-3273117... 173 1e-43
Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 ... 171 4e-43
Medtr8g009810.1 | pectin lyase superfamily protein | HC | chr8:2... 171 8e-43
Medtr7g091850.1 | endo polygalacturonase | HC | chr7:36360735-36... 170 1e-42
Medtr8g065030.1 | pectin lyase superfamily protein | HC | chr8:2... 170 1e-42
Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family p... 169 2e-42
Medtr2g029170.1 | endo-polygalacturonase | HC | chr2:10881421-10... 169 3e-42
Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family p... 168 4e-42
Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family ... 166 2e-41
Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family p... 166 2e-41
Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-4695913... 161 4e-40
Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family p... 160 7e-40
Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family p... 155 3e-38
Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family p... 154 6e-38
Medtr4g094715.1 | pectin lyase superfamily protein | HC | chr4:3... 150 7e-37
Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 | ... 150 1e-36
Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 ... 149 2e-36
Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family p... 149 2e-36
Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 ... 149 2e-36
Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family p... 149 2e-36
Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 ... 149 3e-36
Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 ... 148 4e-36
Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 ... 145 3e-35
Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family p... 143 2e-34
Medtr7g091840.1 | endo polygalacturonase | HC | chr7:36349369-36... 142 3e-34
Medtr8g031180.1 | polygalacturonase | LC | chr8:11659557-1165736... 137 1e-32
Medtr2g032710.2 | polygalacturonase plant-like protein | HC | ch... 135 3e-32
Medtr2g032710.1 | polygalacturonase plant-like protein | HC | ch... 135 3e-32
Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 ... 134 6e-32
Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 ... 134 7e-32
Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 ... 133 1e-31
Medtr2g100040.1 | polygalacturonase | LC | chr2:42942787-4294449... 133 1e-31
Medtr8g065010.1 | polygalacturonase plant-like protein | HC | ch... 131 5e-31
Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-1451629... 129 2e-30
Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-1473941... 129 2e-30
Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-1355938... 120 1e-27
Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-4452318... 119 3e-27
Medtr4g119775.1 | polygalacturonase/glycoside hydrolase family p... 117 1e-26
Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 | ... 114 6e-26
Medtr8g010050.1 | pectin lyase superfamily protein | LC | chr8:2... 112 2e-25
Medtr8g077320.1 | pectin lyase superfamily protein | LC | chr8:3... 111 5e-25
Medtr5g034090.2 | polygalacturonase | HC | chr5:14734905-1473875... 100 1e-21
Medtr7g072360.1 | polygalacturonase/glycoside hydrolase family p... 96 3e-20
Medtr7g072370.1 | polygalacturonase/glycoside hydrolase family p... 75 4e-14
Medtr1g100040.1 | pectin lyase superfamily protein | HC | chr1:4... 59 3e-09
Medtr4g124980.1 | pectin lyase superfamily protein | HC | chr4:5... 59 4e-09
Medtr1g100050.1 | pectin lyase superfamily protein | HC | chr1:4... 58 7e-09
Medtr2g042740.1 | pectin lyase superfamily protein | HC | chr2:1... 58 7e-09
Medtr1g099850.1 | pectin lyase superfamily protein | HC | chr1:4... 58 1e-08
Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family p... 57 2e-08
Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family p... 57 2e-08
Medtr1g100060.1 | pectin lyase superfamily protein | HC | chr1:4... 56 3e-08
Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family p... 51 9e-07
Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family p... 51 1e-06
Medtr7g088550.1 | pectin lyase superfamily protein | HC | chr7:3... 51 1e-06
Medtr2g103830.1 | polygalacturonase | LC | chr2:44701852-4470205... 50 2e-06
Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family p... 49 6e-06
Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family p... 48 7e-06
Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family p... 48 8e-06
>Medtr8g030930.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr8:11531499-11533056 | 20130731
Length = 399
Score = 343 bits (880), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 163/239 (68%), Positives = 196/239 (82%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
MKFDFITN VH +HSI+SKQ+HF+LF CENM L L ++AP DSPNTDGIKIG S G+N
Sbjct: 151 MKFDFITNGYVHDMHSIDSKQSHFVLFGCENMLLRGLKITAPKDSPNTDGIKIGMSKGIN 210
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I+SVNIGTGDDCIA++SG + VRI DVFCGPGHGISVGSLG N+GE+D++DIVVKNCTF+
Sbjct: 211 ISSVNIGTGDDCIAMLSGTRNVRISDVFCGPGHGISVGSLGGNEGEEDIDDIVVKNCTFN 270
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
GT NG+RIK+W S L KTL SNF YEDIVM+NV+NPI+IDQ+YC +PPC + VS+VQI
Sbjct: 271 GTSNGVRIKSWESQLKKTLVVSNFTYEDIVMNNVQNPIVIDQDYCSHPPCIKKGVSSVQI 330
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGASY 239
SNV Y NIRGS T++AA+F+CS+NKPCQNI ENI L SG ++N C V GA+Y
Sbjct: 331 SNVAYKNIRGSGNTKVAASFECSQNKPCQNIRMENINLWPSGHSKKLNNVCLFVKGATY 389
>Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:13011474-13013852 | 20130731
Length = 395
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/239 (64%), Positives = 184/239 (76%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
M FDF+TN +H L S NSK HF LFACENM T++ +SAP DSPNTDGIKIG+SNG+
Sbjct: 148 MTFDFVTNGTIHHLRSFNSKGAHFKLFACENMIFTKIRISAPGDSPNTDGIKIGKSNGIT 207
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I S +IGTGDDCIA++SG + V I DVFCGPGHG+S+GSLGKNDGE+DV++I VKNCTFS
Sbjct: 208 IKSASIGTGDDCIAMVSGTRNVWISDVFCGPGHGVSIGSLGKNDGEEDVDNINVKNCTFS 267
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
T NGLRIKTWAS L+K LKAS+ VYEDIVM+NV NPI+IDQEYCP C +V SNVQI
Sbjct: 268 DTTNGLRIKTWASPLTKILKASHIVYEDIVMNNVGNPILIDQEYCPNRGCSNKVPSNVQI 327
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGASY 239
+ V Y NIRGS +E A N KCS +PCQNI ENI L + GK ++N C++ +S+
Sbjct: 328 NTVSYKNIRGSVNSEHAMNLKCSEKEPCQNIIVENIDLWPNDGKRKLNNWCSHAYVSSF 386
>Medtr5g063430.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr5:26299058-26301816 | 20130731
Length = 315
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 141/165 (85%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
MKFD+ITN +H +HS NSKQ+HF L+ C NMTLT+L + AP DSPNTDGIKIG+S G+N
Sbjct: 142 MKFDYITNGYIHHMHSFNSKQSHFGLYRCNNMTLTKLQIKAPGDSPNTDGIKIGKSTGIN 201
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
ITSVNI TG+DCI+++SG K V+IMDV+CGPGHGI++GSLGK + E+D+ DI+VKNCTF+
Sbjct: 202 ITSVNIRTGNDCISMLSGLKNVQIMDVYCGPGHGINIGSLGKYEDEEDLADIIVKNCTFN 261
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYC 165
GT NG+RIK++ S L+KT+ ASNF+YEDIVM+NVE I+IDQ YC
Sbjct: 262 GTSNGVRIKSYESQLNKTVVASNFIYEDIVMENVEYHIVIDQHYC 306
>Medtr2g058670.1 | polygalacturonase 11c, putative | HC |
chr2:24244330-24242502 | 20130731
Length = 419
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 151/232 (65%), Gaps = 3/232 (1%)
Query: 3 FDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNIT 62
F+F+ NS VH + S +SK H M+F C N+T T++AP DSPNTDGI +G+S GV I
Sbjct: 152 FNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFTITAPGDSPNTDGIHMGKSTGVKIL 211
Query: 63 SVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGT 122
+ NIGTGDDC+++ G+K++ + V CGPGHG+S+GSLGK E++VE I +KNCT + T
Sbjct: 212 NTNIGTGDDCVSIGDGSKQITVEGVKCGPGHGLSIGSLGKFTTEENVEGITIKNCTLTAT 271
Query: 123 DNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISN 182
DNG+RIKTW + T+ S+ +EDI M NV+NP+IIDQEYCP+ C + S +++S
Sbjct: 272 DNGVRIKTWPDA-PGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKKNPSKIKLSK 330
Query: 183 VKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNV 234
+ + N++G+S T CS PC + N+ L +G + C NV
Sbjct: 331 ITFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGAP--TTAKCTNV 380
>Medtr2g058840.1 | polygalacturonase 11c, putative | HC |
chr2:24297949-24299598 | 20130731
Length = 417
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 151/232 (65%), Gaps = 3/232 (1%)
Query: 3 FDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNIT 62
F+F+ NS VH + S +SK H M+F C N+T T++AP DSPNTDGI +G+S GV I
Sbjct: 150 FNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFTITAPGDSPNTDGIHMGKSTGVKIL 209
Query: 63 SVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGT 122
+ NIGTGDDC+++ G+K++ + V CGPGHG+S+GSLGK E++VE I +KNCT + T
Sbjct: 210 NTNIGTGDDCVSIGDGSKQITVEGVKCGPGHGLSIGSLGKFTTEENVEGITIKNCTLTAT 269
Query: 123 DNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISN 182
DNG+RIKTW + T+ S+ +EDI M NV+NP+IIDQEYCP+ C + S +++S
Sbjct: 270 DNGVRIKTWPDA-PGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKKNPSKIKLSK 328
Query: 183 VKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNV 234
+ + N++G+S T CS PC + N+ L +G + C NV
Sbjct: 329 ITFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGAP--TTAKCTNV 378
>Medtr2g058640.1 | polygalacturonase 11c, putative | HC |
chr2:24232613-24230991 | 20130731
Length = 407
Score = 211 bits (537), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 148/234 (63%), Gaps = 3/234 (1%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F F+ NS V + S +SK H M+ C N T T++AP+DSPNTDGI +G S V
Sbjct: 150 LGFMFVNNSMVTGVTSKDSKNFHVMVLGCNNFTFDGFTVTAPSDSPNTDGIHMGRSTDVK 209
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + NIGTGDDC++L G++K+ + V CGPGHGISVGSLG+ E +VE + VKNCT +
Sbjct: 210 ILNTNIGTGDDCVSLGDGSRKITVQGVKCGPGHGISVGSLGRYTTEDNVEGVTVKNCTLT 269
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
T NG+RIKTW + T+ S+ +EDI M+NV NPIIIDQEYCP+ C +V S V++
Sbjct: 270 ATQNGVRIKTWPDA-PGTITVSDIHFEDITMNNVTNPIIIDQEYCPWNACNKKVPSKVKL 328
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNV 234
S + + NI+G+S CS PC + N+ + + GK I+ C+NV
Sbjct: 329 SKISFKNIQGTSGAPEGVVLVCSSAVPCDGVELNNVDV-KFNGKPAIAK-CSNV 380
>Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-24858654 |
20130731
Length = 444
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 149/228 (65%), Gaps = 6/228 (2%)
Query: 8 NSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIG 67
N KV L +S+Q H + C N+ ++ L + AP DSPNTDGI + E+ ++I + +IG
Sbjct: 207 NLKVKNLRFKDSQQMHVVFERCFNVFVSNLIVRAPEDSPNTDGIHVAETQNIDIINCDIG 266
Query: 68 TGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLR 127
TGDDCI+++SG+K VR +D+ CGPGHGIS+GSLG ++ E +V ++VV +GT NG+R
Sbjct: 267 TGDDCISIVSGSKNVRAIDITCGPGHGISIGSLGADNSEAEVSNVVVNRAALTGTTNGVR 326
Query: 128 IKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPY-PPCKTQVVSNVQISNVKYT 186
IKTW + A N + +I M NV NP+IIDQ YC PC+ + + VQ+S V Y
Sbjct: 327 IKTWQGG---SGYARNIKFMNIKMQNVTNPVIIDQYYCDQTEPCQERNKA-VQLSQVLYQ 382
Query: 187 NIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNV 234
NIRG+S +EIA F CSR+ PC+ I +++ L GG GG + +C NV
Sbjct: 383 NIRGTSASEIAIKFNCSRSVPCREIYLQDVILEPEGG-GGTTATCENV 429
>Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-39390473 |
20130731
Length = 407
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 145/235 (61%), Gaps = 6/235 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+KFD I N+ V + S+NS Q HF L C N++ T L ++AP +SPNTDG+ I S+ +
Sbjct: 161 LKFDKIKNAIVQDVTSLNSMQFHFHLHGCSNISFTNLHITAPGNSPNTDGMHISSSDFIT 220
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
+T+ I TGDDCI++ + I + CGPGHGISVGSLGK EK V + VKNCTF
Sbjct: 221 VTNSVIATGDDCISVGHSTSNITISGITCGPGHGISVGSLGKRPEEKTVNGVSVKNCTFI 280
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
G+ NG RIKTW + +A N VYED++M +V+NPI+IDQ Y + S +I
Sbjct: 281 GSTNGARIKTWIGTAPA--EAKNIVYEDLIMKDVQNPIVIDQSYGKKE--RVPSTSVWKI 336
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGI--SNSCNN 233
S+ + I+G++++ I + +CS PC+NI ++ LT G + I +NSC N
Sbjct: 337 SDAHFRRIKGTTVSNIPVSLQCSSKNPCENIEVADVELTYVGPQKSIPFANSCIN 391
>Medtr1g052315.1 | endo polygalacturonase | HC |
chr1:21186740-21183250 | 20130731
Length = 449
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 141/225 (62%), Gaps = 6/225 (2%)
Query: 11 VHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGD 70
V L+ N +Q H N+ ++ LT++AP DSPNTDGI + + + I++ IGTGD
Sbjct: 199 VEDLNVKNGQQIHVQFQNSANVRVSGLTVTAPEDSPNTDGIHVTNTQNIQISNSIIGTGD 258
Query: 71 DCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
DCI++++G K ++ D+ CGPGHGIS+GSLG+ ++ V I V S T NG+RIKT
Sbjct: 259 DCISIVNGTKNLKATDITCGPGHGISIGSLGEGGSKEFVSGITVNGAKLSRTTNGVRIKT 318
Query: 131 WASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYC-PYPPCKTQVVSNVQISNVKYTNIR 189
W + ASN +++I M+NV NPIIIDQ YC PC+ Q S VQI NV Y NI+
Sbjct: 319 WQGG---SGSASNIKFQNIQMENVTNPIIIDQNYCDQQSPCQKQ-KSAVQIRNVLYQNIK 374
Query: 190 GSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNV 234
G+S +++A F CS+N PCQ I +NI L GG G SCNNV
Sbjct: 375 GTSASDVAMQFNCSQNFPCQGILLQNIGLELEGG-GEAKASCNNV 418
>Medtr5g097860.1 | polygalacturonase | HC | chr5:42842979-42844751 |
20130731
Length = 343
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 130/191 (68%), Gaps = 2/191 (1%)
Query: 3 FDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGES-NGVNI 61
F+F+ S V + S +SK H + C N T LT++APA S NTDGI IG S + V +
Sbjct: 149 FNFLKLSIVQDIISKDSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRSTDDVKV 208
Query: 62 TSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSG 121
+ NI TGDDCI+L G++++ + +V CGPGHGISVGSLGKN E+ E ++VKNCT S
Sbjct: 209 LNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVKNCTISN 268
Query: 122 TDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQIS 181
TDNG+RIKTW SS T ++ +ED +M NV NP+IIDQEYCP+ C QV S ++IS
Sbjct: 269 TDNGVRIKTWPSS-PGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQCSKQVPSKIKIS 327
Query: 182 NVKYTNIRGSS 192
V + NIRG++
Sbjct: 328 KVIFKNIRGTT 338
>Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38095209-38097944 | 20130731
Length = 396
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 146/228 (64%), Gaps = 18/228 (7%)
Query: 14 LHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCI 73
L+ +NS +NH + +C+N ++ + ++AP SPNTDGI I +S + I + I TGDDCI
Sbjct: 163 LNHMNSPKNHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETGDDCI 222
Query: 74 ALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWAS 133
A+ +G+ + I FCGPGHGISVGSLGK++ VED+ V+NCTF+GT NG RIKT+
Sbjct: 223 AINNGSSVITITGTFCGPGHGISVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIKTFEG 282
Query: 134 SLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRGSSM 193
+ A N YEDI+++ V+NP+IIDQ Y P S V+IS+V Y+NIRG+S+
Sbjct: 283 G---SGYARNITYEDIILNEVKNPVIIDQAYNP------NADSAVEISDVTYSNIRGTSV 333
Query: 194 TEIAANFKCSRNKPCQNITTENIRLTRS-GGKGGI--------SNSCN 232
E A KC N C NI ++I +TR+ GGK G+ S+SCN
Sbjct: 334 GEYAIELKCELNIGCNNIVLDHINITRADGGKAGVVCVGGHGNSSSCN 381
>Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 |
20130731
Length = 400
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 141/236 (59%), Gaps = 9/236 (3%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F N + L INS +NH L AC +++L + AP +SPNTDGI I ES+ +
Sbjct: 159 LHFHACENLILRELTHINSPRNHISLNACHGSHISKLHIIAPNESPNTDGIDIAESSNII 218
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + I TGDDCIA+ G+ + I +FCGPGHGISVGSLG+N + VE+I V+NCTF+
Sbjct: 219 IENSKIETGDDCIAINHGSNSIYINGIFCGPGHGISVGSLGRNGVHESVENIYVRNCTFN 278
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
T NG RIKTW + A +EDI++ +NP+IIDQEY PY V++
Sbjct: 279 RTTNGARIKTW---IGGNGYARKVTFEDIILIEADNPVIIDQEYNPYDSAYA-----VKV 330
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
S+V + NIRG+S+ + A C + C NI E I +T S G+ + SC NVNG
Sbjct: 331 SDVTFRNIRGTSIAKHAIQLHCDEDITCTNIILEGINITSSIGE-EVHASCKNVNG 385
>Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 451
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 143/239 (59%), Gaps = 6/239 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F + KV L +NS++ H +C + +RL + APA SPNTDGI I + GV
Sbjct: 186 LTFHKCKSLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDGIHISATKGVE 245
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I I TGDDCI+++ + +V I ++ CGPGHGIS+GSLGK++ + +++++V
Sbjct: 246 IRDSLIRTGDDCISIVRNSSRVWIRNISCGPGHGISIGSLGKSNVWEKIQNVIVDGAYLY 305
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYC-PYPPCKTQVVSNVQ 179
TDNG+RIKTW + AS +++I+M+NV NPIIIDQ YC PCK Q S VQ
Sbjct: 306 NTDNGVRIKTWQGG---SGFASKITFQNILMENVSNPIIIDQYYCDSRHPCKNQ-TSAVQ 361
Query: 180 ISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
+ N+ + NI+G+S TE F CS PC+ + ENI L RS G + C +G++
Sbjct: 362 VGNISFINIQGTSATEETIKFACSDASPCEGLYLENIFL-RSYFGGNTRSYCWQAHGSA 419
>Medtr2g435640.1 | polygalacturonase | HC | chr2:13796366-13791435 |
20130731
Length = 423
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 140/232 (60%), Gaps = 4/232 (1%)
Query: 3 FDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNIT 62
F+ +T+ + + S + K H + N+ L + L+APA SPNTDG+ I S V I+
Sbjct: 182 FNQVTDGIIQNIKSKDPKGFHVFVTNSANIRLRLIKLNAPATSPNTDGLHISHSINVKIS 241
Query: 63 SVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGT 122
++ TGDDC+++I G V I + CGPGHGIS+GSLGK E +V I V+ C GT
Sbjct: 242 RSSVETGDDCVSMIQGVSNVTIKRIRCGPGHGISIGSLGKYPDEIEVSGIRVQTCKLVGT 301
Query: 123 DNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISN 182
NGLRIK+W A++ Y DI M+NV+NPIIIDQEY P CK + S V+I N
Sbjct: 302 TNGLRIKSWPDKYPGA--ATDINYSDITMENVKNPIIIDQEYECSPNCKKK-PSLVKIKN 358
Query: 183 VKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNV 234
+ + NIRG++ + IA + KCS+ PC+N+ NI L+ G K ++ C N+
Sbjct: 359 ISFRNIRGTTTSPIAVDLKCSKLFPCKNVGLHNINLSL-GAKKPTASKCANI 409
>Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-49886301 |
20130731
Length = 422
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 136/218 (62%), Gaps = 3/218 (1%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F + N+ + + S+N K H + C N+ L RL L+AP SPNTDGI I S GV
Sbjct: 180 LYFTKVQNAIIMGIKSVNPKGFHVFVTQCSNIRLQRLRLTAPDTSPNTDGIHISTSYGVK 239
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I IGTGDDC+ +I G++++ I + CGPGHGIS+GSLG+ E++V+ + V+N
Sbjct: 240 INRCTIGTGDDCVGMIDGSEQIAINKLKCGPGHGISIGSLGRRADEREVKGVRVQNSELI 299
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
GTDNGLRIK++ + AS + +I M NV+NPIIIDQEY CK + S V+I
Sbjct: 300 GTDNGLRIKSFPERFAG--GASEIFFTNINMTNVKNPIIIDQEYECDDICKKK-PSLVKI 356
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRL 218
+N+ ++NIRG+S T + + +CS+ C +T N+ L
Sbjct: 357 ANIHFSNIRGTSATPMVVDMRCSKMHTCPGVTFNNVDL 394
>Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-32522029 |
20130731
Length = 374
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 142/239 (59%), Gaps = 6/239 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++F N + L S+NS+ H + CEN+ + + + A +SPNTDGI + S+ V
Sbjct: 131 LEFSNSKNIMISGLTSMNSQMFHIVFNGCENVKMQGVNIMAAGNSPNTDGIHVQMSSHVT 190
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + I TGDDCI++ G + I ++ CGPGHGIS+GSLG E V+++ VK TF+
Sbjct: 191 IVNSKIRTGDDCISIGPGTSNLWIENIACGPGHGISIGSLGWKLNEPGVQNVTVKTVTFT 250
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
GT NG+RIK+W + ++ N ++D +M NV+NPI+IDQ YCP S +++
Sbjct: 251 GTQNGVRIKSWGRPSNGFVR--NIFFQDAIMVNVQNPIVIDQNYCPNNKGCPGQASGIKV 308
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISN-SCNNVNGAS 238
S V Y NI G+S T++A F CS PC I ++++LT K ++ SCN+ GA+
Sbjct: 309 SGVTYQNIHGTSATQVAVKFDCSSKYPCSGIKMKDVKLTY---KNQVAEASCNHAGGAA 364
>Medtr2g049400.1 | pectin lyase superfamily protein | LC |
chr2:21772816-21776116 | 20130731
Length = 391
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 140/238 (58%), Gaps = 4/238 (1%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F + N V L S+NSK H + C+N+ + + + AP+ SPNTDGI + S GV
Sbjct: 148 ISFSWSKNVLVSGLTSLNSKAIHIAVDHCKNVVIKDVKIRAPSRSPNTDGINVQFSTGVT 207
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I+ I TGDDCI++ G V I + CGPGHGIS+GSLG + E VE++ V + F+
Sbjct: 208 ISHSTIMTGDDCISINQGTTHVWIDRIACGPGHGISIGSLGSDSNEAGVENVTVTDSVFT 267
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
T NG+RIK+WA + + NF +++M NV PIIIDQ YC C Q S V+I
Sbjct: 268 KTQNGVRIKSWAKPNNGYARDINF--RNLIMQNVYYPIIIDQRYCTKTDCPHQ-NSGVKI 324
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
S+V Y +I+G+S + +A F CS++ PC + ++I L G S+SC N G++
Sbjct: 325 SSVSYQHIKGTSASPVAIKFDCSQSNPCLGLKLQDINLIYLKGS-KTSSSCRNAGGST 381
>Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-32731175 |
20130731
Length = 394
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 139/236 (58%), Gaps = 11/236 (4%)
Query: 8 NSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIG 67
N K+ L INS +NH + C + ++ L + AP DSPNTDGI I S +++ I
Sbjct: 153 NLKLGPLKHINSPRNHISIVGCNDALISNLHIIAPKDSPNTDGIDISTSTNISVQHSIIS 212
Query: 68 TGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLR 127
TGDDCIA+ +G + + I D+ CGPGHGISVGSLGK+ VE+I V N TF T NG R
Sbjct: 213 TGDDCIAINNGTEFIYITDIQCGPGHGISVGSLGKDGDYSTVEEIHVSNITFRETTNGAR 272
Query: 128 IKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQ------VVSNVQIS 181
IKTW + A YEDI++ VENP+IIDQ+Y P KT+ V V++S
Sbjct: 273 IKTWTGG---SGYARKITYEDIIVFKVENPVIIDQQYDALEPLKTKYNVLEGVSKAVKVS 329
Query: 182 NVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGA 237
+V + NIRG++ + A + C+R C NI E+I + GK S SCN+V G+
Sbjct: 330 DVIFRNIRGTTNGKDAIDLNCAR-IGCTNIILEDIDIVDLDGKKA-SASCNSVQGS 383
>Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 |
20130731
Length = 437
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 145/232 (62%), Gaps = 4/232 (1%)
Query: 3 FDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNIT 62
FD N KV ++ N++Q H + C N+ + L ++AP SPNTDGI I S V IT
Sbjct: 196 FDECNNLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAPGHSPNTDGIHITHSQNVFIT 255
Query: 63 SVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGT 122
+ IGTGDDCI+++SG+K VR D+ CGPGHGIS+GSLG + + +V ++ V T GT
Sbjct: 256 NSTIGTGDDCISIVSGSKNVRATDITCGPGHGISIGSLGGGNTQAEVSNVEVNRATLIGT 315
Query: 123 DNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISN 182
NG+RIKTW + A N + +IV+ NV NPIIIDQ+YC + S V++SN
Sbjct: 316 TNGVRIKTWQGG---SGYARNIKFINIVVRNVTNPIIIDQKYCDQKKKCQEQNSAVELSN 372
Query: 183 VKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNV 234
V Y NI+G+S +E+A +CS+ PC+ I +++++T K I+ C+NV
Sbjct: 373 VMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVKITGENIKDTIA-KCDNV 423
>Medtr8g009810.1 | pectin lyase superfamily protein | HC |
chr8:2423952-2426973 | 20130731
Length = 400
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 140/240 (58%), Gaps = 6/240 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++F N ++ + S+NS+ H ++ C N+ + + ++A +SPNTDGI + S+ V
Sbjct: 157 LRFSNSNNIVMNGVTSLNSQMFHIVIDRCNNVKVQGVKVTAAGNSPNTDGIHVQLSSSVT 216
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + NI TGDDCI++ SG + I + CGPGHGIS+GSL K E VE++ VK F
Sbjct: 217 ILNSNIETGDDCISIGSGTTNLWIESIACGPGHGISIGSLAKEFQELGVENVTVKTIKFI 276
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCP-YPPCKTQVVSNVQ 179
GT+NG+RIK+W + A N +++ M NV+NPI+IDQ YCP C Q S V+
Sbjct: 277 GTENGVRIKSWGRPSNGF--ARNIIFQHATMVNVQNPIVIDQNYCPNQKDCPGQ-ASGVK 333
Query: 180 ISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGASY 239
ISN+ Y +I G+S T++A CS PC I+ E++ LT CN+ G +Y
Sbjct: 334 ISNIIYQDIHGTSATKVALKLNCSPTNPCTGISLEDVMLTYENKNA--EALCNHAGGVTY 391
>Medtr7g091850.1 | endo polygalacturonase | HC |
chr7:36360735-36353948 | 20130731
Length = 450
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 5/235 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ FD + V L N++Q H N+ + L +S+P +SPNTDGI I + +
Sbjct: 201 LTFDSCKDLIVEDLTIQNAQQIHVSFQDSTNVKASGLKVSSPGNSPNTDGIHITNTQNIK 260
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I+S IGTGDDCI+++ G+ V D+ CGPGHGIS+GSLG + V ++V S
Sbjct: 261 ISSSIIGTGDDCISIVDGSSNVEATDITCGPGHGISIGSLGAGKSKDFVSGVLVNGAKIS 320
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVV-SNVQ 179
GT NG+RIKTW + ASN +++I MDNV NPIII+Q YC + + S VQ
Sbjct: 321 GTTNGVRIKTWPGG---SGSASNIKFQNIEMDNVTNPIIINQNYCDKKKKPCKKMDSAVQ 377
Query: 180 ISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNV 234
ISNV Y NI G S +++A F CS PC+ I +NI L G+ + CNNV
Sbjct: 378 ISNVLYQNITGKSASDVAVKFDCSEKFPCKEIKMQNILLICEEGEPAKA-LCNNV 431
>Medtr8g065030.1 | pectin lyase superfamily protein | HC |
chr8:27313786-27310073 | 20130731
Length = 461
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 138/239 (57%), Gaps = 5/239 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ D ++ KV L NS+Q HF + C+++ + + +++P DSPNTDGI I ES V
Sbjct: 191 LTIDTSSSIKVKGLTIQNSQQMHFTISRCDSVRILGVKVASPGDSPNTDGIHISESTNVI 250
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
+ IGTGDDCI++++ + +++ +FCGPGHGIS+GSLGK++ V +++
Sbjct: 251 VQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVILDTAFLK 310
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
GT NGLRIKTW + +K F +++ ++NV NPI+IDQ YC P S ++I
Sbjct: 311 GTTNGLRIKTWQGG-AGYVKGVRF--QNVRVENVSNPILIDQFYCDSPTSCQNQSSALEI 367
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGASY 239
S + Y N+ G++ + A F CS PC N+ N+ L + G + C++ G Y
Sbjct: 368 SEIMYQNVSGTTNSAKAIKFDCSDTVPCSNLVLSNVDLEKQDGT--VETYCHSAQGFGY 424
>Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38089185-38091032 | 20130731
Length = 391
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 134/237 (56%), Gaps = 5/237 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++F N K+ L I+S +NH + C ++ L + AP +SPNTDGI I S +
Sbjct: 148 LQFLGCDNLKLGPLRHIDSPKNHISIVDCNGALISHLHIIAPENSPNTDGIDISRSTNII 207
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I I TGDDCIA+ SG+K + I + CGPGHGISVGSLGK+ VE++ V + F+
Sbjct: 208 IEHSTISTGDDCIAINSGSKFINITAINCGPGHGISVGSLGKDGKYATVEEVHVSHSIFT 267
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
GT+NG RIKTW + T A YEDI + V NPIIIDQ Y V V++
Sbjct: 268 GTENGARIKTWTAG---TGYARKITYEDITLIKVNNPIIIDQHYDALESVSDSVRKGVKV 324
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGA 237
S+V + RG++ + A C+R C NI ENI + GG+ S SCNNV G+
Sbjct: 325 SDVTFRGFRGTANEKDAIELNCARIG-CTNIVLENINIAGLGGEKP-SASCNNVQGS 379
>Medtr2g029170.1 | endo-polygalacturonase | HC |
chr2:10881421-10882932 | 20130731
Length = 361
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 141/227 (62%), Gaps = 8/227 (3%)
Query: 14 LHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCI 73
L S+NS+ H ++ C N+ + + + AP +SPNTDGI + S+ + I I TGDDCI
Sbjct: 131 LTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIRTGDDCI 190
Query: 74 ALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWAS 133
++ + + I V CGPGHGIS+GSLG E V+++ VK+ TF+ T NG RIK+W
Sbjct: 191 SIGPSTRNLWIEHVECGPGHGISIGSLGWKLNEPGVKNVTVKSTTFTKTQNGFRIKSWGK 250
Query: 134 SLSKTLKASNFVYEDIVMDNVENPIIIDQEYCP-YPPCKTQVVSNVQISNVKYTNIRGSS 192
+ ++ +FV+ ++ +V+NPI+IDQ YCP Y C + S + IS+V Y +I+G+S
Sbjct: 251 PSNGFVRHVHFVHATMI--DVQNPILIDQHYCPLYKGCSNE-ASGIMISDVLYKDIQGTS 307
Query: 193 MTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNS-CNNVNGAS 238
T++A F+CS +PC+ I E+++L+ K + + CN+V G +
Sbjct: 308 ATKVAVRFECSSKQPCRRIKLEDLKLSY---KNQVPKALCNHVAGTA 351
>Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:21549576-21552288 | 20130731
Length = 401
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 140/237 (59%), Gaps = 12/237 (5%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++F + K++ L NS +NH + C+ ++ L + A SPNTDGI I +S+ V
Sbjct: 155 LQFLGCQDLKLNDLTHRNSPRNHISIDTCKGAFISNLHIIAAPTSPNTDGIDISQSSNVF 214
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
IT+ IGTGDDCIA+ SG++ + I VFCGPGHGISVGSLGKN VE + V+NCTF+
Sbjct: 215 ITNSFIGTGDDCIAINSGSRFINITGVFCGPGHGISVGSLGKNGAFSTVEQVYVRNCTFT 274
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
T NG RIKT+ + A N YEDI + VENP+ I+Q Y P S V++
Sbjct: 275 RTSNGARIKTFTGG---SGYARNIKYEDITLVEVENPVYINQNYIPVQD------SAVEV 325
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTR-SGGKGGISNSCNNVNG 236
S+V ++NI G+S + A C N C +I NI + SGG+ + SC+N +G
Sbjct: 326 SDVTFSNIHGTSTGKYAVELLCEPNIGCTDIVLNNINIKPISGGEALV--SCSNAHG 380
>Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family
protein | LC | scaffold0157:20596-15247 | 20130731
Length = 365
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 141/240 (58%), Gaps = 6/240 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ D +N +++ H +NS +NH + +++ + ++ ++AP +SPNTDGI IG S+ V
Sbjct: 115 LHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHSSYVL 174
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I I TGDDCIA+ +G + I V CGPGHGISVGSLG+N + VE + VKNCTF
Sbjct: 175 IQDSTIATGDDCIAMNNGTSNINITGVTCGPGHGISVGSLGENGAYEIVEQVYVKNCTFI 234
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVV--SNV 178
T+NG+RIKTW + A N +E I++ +NPIIIDQ Y K + S V
Sbjct: 235 RTENGMRIKTWPGG---SGYARNISFEQIILTETKNPIIIDQNYRDLVIDKANNMQKSEV 291
Query: 179 QISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
QIS V Y ++ G+S ++ + C++N C +I + + +T GK SC N +G +
Sbjct: 292 QISGVTYRDVIGTSNSKTSIKLNCNKNSGCTDIFMDVVNITSISGK-TTKASCKNAHGEA 350
>Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr4:12499881-12505230 | 20130731
Length = 365
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 141/240 (58%), Gaps = 6/240 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ D +N +++ H +NS +NH + +++ + ++ ++AP +SPNTDGI IG S+ V
Sbjct: 115 LHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHSSYVL 174
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I I TGDDCIA+ +G + I V CGPGHGISVGSLG+N + VE + VKNCTF
Sbjct: 175 IQDSTIATGDDCIAMNNGTSNINITGVTCGPGHGISVGSLGENGAYEIVEQVYVKNCTFI 234
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVV--SNV 178
T+NG+RIKTW + A N +E I++ +NPIIIDQ Y K + S V
Sbjct: 235 RTENGMRIKTWPGG---SGYARNISFEQIILTETKNPIIIDQNYRDLVIDKANNMQKSEV 291
Query: 179 QISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
QIS V Y ++ G+S ++ + C++N C +I + + +T GK SC N +G +
Sbjct: 292 QISGVTYRDVIGTSNSKTSIKLNCNKNSGCTDIFMDVVNITSISGK-TTKASCKNAHGEA 350
>Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-46959130 |
20130731
Length = 376
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 125/225 (55%), Gaps = 23/225 (10%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F + KV L +NS++ H C + ++RL +SAP+ SPNTDGI I + G+
Sbjct: 126 LTFHRCKSLKVRNLTVVNSQKMHIAFTRCMRVVVSRLNVSAPSSSPNTDGIHISATKGIE 185
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I+ ++ TGDDCI+++ + +V I + CGPGHGIS+G+ N
Sbjct: 186 ISHSDVKTGDDCISIVRNSSQVWIRNFSCGPGHGISIGTYLTN----------------- 228
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYC-PYPPCKTQVVSNVQ 179
T NGLRIKTW ASN ++DIVM+NV NPIIIDQ YC PCK Q S VQ
Sbjct: 229 -TKNGLRIKTWQGGHG---LASNITFQDIVMENVSNPIIIDQYYCDSRLPCKNQ-TSAVQ 283
Query: 180 ISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGK 224
+ N+ + NI G+S +E F CS PC+ + ENI L G+
Sbjct: 284 VVNISFINIIGTSASEETIKFACSDTYPCEGLHLENIYLPSYFGE 328
>Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr5:19058555-19056081 | 20130731
Length = 400
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 141/236 (59%), Gaps = 8/236 (3%)
Query: 3 FDFI--TNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
F FI + + L+ INS +NH + +C+N +++ L + AP +SPNTDGI I S+ +
Sbjct: 155 FQFIGCESLTISNLNHINSPRNHISIDSCKNASISNLQIIAPENSPNTDGIDIASSSNII 214
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I +++I TGDDCIA+ SG+ + I V CGPGHGISVGSLGK VE++ VK+CTF+
Sbjct: 215 INNLSIKTGDDCIAINSGSNFINITGVLCGPGHGISVGSLGKGGEYATVEEVHVKDCTFT 274
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
GT NG RIKTW + A YE+I + V+NPIII+Q Y P+ + V V++
Sbjct: 275 GTTNGARIKTWKGG---SGYARKITYENIKLVEVKNPIIINQNYNPHIYDSSSEV--VKV 329
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
S+V + NI G+S+ E C C NI ++I +T G G SC N +G
Sbjct: 330 SDVTFLNIHGTSVNENTVQLNCDPKIGCDNIIIDHINITSVAG-GEPHASCTNAHG 384
>Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:3280656-3277876 | 20130731
Length = 382
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 137/238 (57%), Gaps = 8/238 (3%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++FD +++ L IN H + +++T++ + +++P S NTDGI + + GVN
Sbjct: 140 LQFDKCDGLQINGLTHINGPGAHIAVIDSQDITISHIHINSPKKSHNTDGIDLTRTIGVN 199
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + I +GDDCIA+ G++ V + +V CGPGHGISVGSLG + E+ V+ VKNCTF+
Sbjct: 200 IHDIQIESGDDCIAVKGGSQFVNVSNVTCGPGHGISVGSLGGHGSEEFVQHFSVKNCTFN 259
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
G D+ ++IKTW A + ++EDI+++ P+ IDQ Y P + V+I
Sbjct: 260 GADSAVKIKTWPGGKG---YAKHIIFEDIIINQTNYPVFIDQHYMRTP----EQHQAVKI 312
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
SN+ ++NI G+ + E A C++ C NIT I +T K S C NV+G +
Sbjct: 313 SNITFSNIYGTCIGEDAVVLDCAK-IGCYNITLNQINITSINRKKPASVKCKNVHGTA 369
>Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38659765-38662894 | 20130731
Length = 477
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 134/239 (56%), Gaps = 5/239 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++F +N V L NS Q HF C+++ + + ++APA SPNTDGI I +N V
Sbjct: 216 IRFFMSSNLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVK 275
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + + GDDC+++ SG V I ++ CGPGHGIS+GSLG ++ V +I V++
Sbjct: 276 IYNSVVSNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGNHNSRACVSNITVRDSVIR 335
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
+DNG+RIKTW + S + +I MD V+NPIIIDQ YC C + S V +
Sbjct: 336 VSDNGVRIKTWQGG---SGSVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCSNK-TSAVFV 391
Query: 181 SNVKYTNIRGS-SMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
S++ YT+I+G+ + +F CS + PC N+T +I L S G C N G S
Sbjct: 392 SDIVYTSIKGTYDIRHPPMHFACSDSIPCTNLTLSDIELLPSQGDMLNDPFCWNAYGNS 450
>Medtr4g094715.1 | pectin lyase superfamily protein | HC |
chr4:38832640-38835379 | 20130731
Length = 461
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 128/238 (53%), Gaps = 5/238 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++F +N V+ L NS Q H + C+ + + L++SAP SPNTDGI + S V
Sbjct: 198 IRFFMSSNLYVNGLKIENSPQFHMIFNGCQGVMINMLSISAPKLSPNTDGIHVENSKDVG 257
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + I GDDCI++ G V I V CGP HGIS+GSLG ++ + V ++ V++
Sbjct: 258 IYNSLISNGDDCISIGPGTSNVEIAGVTCGPSHGISIGSLGVHNSQACVSNLTVRDTVIR 317
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
+DNGLRIKTW + SN +E+I M+NV N I+IDQ YC C Q S V +
Sbjct: 318 ESDNGLRIKTWQGGMG---SVSNLKFENIQMENVGNCILIDQYYCLTKECLNQ-TSAVHV 373
Query: 181 SNVKYTNIRGSSMTEIAA-NFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGA 237
++V Y NI+G+ A +F CS C NIT + L G+ C N GA
Sbjct: 374 NDVSYKNIKGTYDVRTAPIHFACSDTVACTNITLSEVELLPFEGELLDDPFCWNAYGA 431
>Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 425
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 5/204 (2%)
Query: 18 NSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCIALIS 77
NS+Q H +C N+ + +T S+P DSPNTDGI + S V I+ + GDDC+++ +
Sbjct: 183 NSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVISGSTLSCGDDCVSIQT 242
Query: 78 GAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSLSK 137
G + + +V CGPGHGIS+GSLGK + + V ++ V++ T T G+RIKTW
Sbjct: 243 GCSNILVHNVNCGPGHGISIGSLGKENTKACVSNVTVRDVTLQNTLTGVRIKTWQGG--- 299
Query: 138 TLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRGSSMTEIA 197
+ N ++ +I + +V+ PI+IDQ YC C+ V S V +S++ YTN+ G+ E
Sbjct: 300 SGSVQNIMFSNIQVSDVKTPIMIDQFYCDGGKCR-NVTSAVAVSSIHYTNVHGTYTKE-P 357
Query: 198 ANFKCSRNKPCQNITTENIRLTRS 221
F CS + PC+ IT + I+L S
Sbjct: 358 IYFACSDSLPCKGITLDTIKLESS 381
>Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 |
20130731
Length = 388
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 126/238 (52%), Gaps = 14/238 (5%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F + V +L NS H + C + + + +PA SPNTDG I S +
Sbjct: 150 LSFHSCNDLSVRKLKITNSPGGHIAINGCYGAKFSNVVIDSPAHSPNTDGFDISASKNIV 209
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I I GDDCIAL G+ + + VFCGPGHGIS+GSLGK++ + VE++ V+NC+F
Sbjct: 210 IEDSTIQAGDDCIALNGGSSYINVTRVFCGPGHGISIGSLGKHNSHEIVEEVYVRNCSFI 269
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSN--V 178
T NG RIKT+ + A ++E I + NV NPIIIDQ Y +QV +N +
Sbjct: 270 DTTNGARIKTFPGG---SGYARKIIFEQIQLKNVYNPIIIDQHY------GSQVATNSAL 320
Query: 179 QISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
Q+++V Y G+ +IA + C C NI + I + S + +S C N +G
Sbjct: 321 QVNDVTYRGFNGTCAGDIAIDLDC---MDCFNIVLDQINIVSSQKRNKVSAICKNFHG 375
>Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:44629212-44625414 | 20130731
Length = 404
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 129/236 (54%), Gaps = 8/236 (3%)
Query: 6 ITNSKVHRLH-----SINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
IT ++ +R SIN ++H L +C+ ++ + L AP +SPNTDGI I S +
Sbjct: 158 ITLNRCYRFQIKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDIQ 217
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
+ + I TGDDCIA+ +G+ ++I + CGPGHGIS+GSLG VED+ VKNCT +
Sbjct: 218 VLNSFIATGDDCIAISAGSSVIKITAITCGPGHGISIGSLGARGDTDIVEDVHVKNCTLT 277
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
T G+RIKT A +E+I NPI IDQ YC + +++
Sbjct: 278 ETLTGVRIKTKQGGGG---FARRITFENIKFVRAHNPIWIDQFYCVNQMVCRNMTKAIKV 334
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
S+V Y I G+S+T+ A N C +N C N+ + + + + K + + C+N +G
Sbjct: 335 SDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRVYVRSAVPKMKVFSFCHNAHG 390
>Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 |
20130731
Length = 390
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 136/238 (57%), Gaps = 8/238 (3%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++FD ++ L IN H + +++T++ + +++P +S NTDGI + + VN
Sbjct: 148 LQFDKCDGLQITGLTHINGPGPHIAVTDSQDITISHIHINSPKESHNTDGIDLTRAIRVN 207
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
+ + I +GDDCIA+ G++ V + V CGPGHGISVGSLG + + VE + +KNCTF+
Sbjct: 208 VHDIPIRSGDDCIAIKGGSQFVNVSQVTCGPGHGISVGSLGGHGSPEFVEHLRIKNCTFN 267
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
G D+ ++IKTW A + ++EDI++ P+ IDQ Y P + V+I
Sbjct: 268 GGDSAVKIKTWPGGKG---YAKDIIFEDIILYQTNYPVYIDQHYMKTP----EQHQAVKI 320
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
SN+K++NI G+ + E A C++ C +IT I++T K S C NV+G +
Sbjct: 321 SNIKFSNIHGTCIDENAIVLDCAK-IGCYDITLNQIKITSINRKKPASVKCKNVHGTA 377
>Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45103855-45101037 | 20130731
Length = 462
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 128/224 (57%), Gaps = 5/224 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++F +N V L NS Q +F AC N+ + + ++AP SPNTDGI + +N V
Sbjct: 201 IRFFMSSNLTVKGLKVKNSPQFNFRFDACNNVHIESIYITAPKISPNTDGIHLEYANDVK 260
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + I GDDC+++ +G+ V I ++ CGP HGIS+GSLG ++ + V +I V++
Sbjct: 261 IYNSVISNGDDCVSIGTGSYDVDIKNITCGPSHGISIGSLGNHNTKACVSNITVRDSIIK 320
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
+DNG+RIKTW + S + +I M +V NPIIIDQ YC C T S V +
Sbjct: 321 MSDNGIRIKTWQGG---SGSVSGVTFNNIHMISVRNPIIIDQYYCLTKDC-TNKTSAVSV 376
Query: 181 SNVKYTNIRGS-SMTEIAANFKCSRNKPCQNITTENIRLTRSGG 223
SN+ YTNI+G+ + +F CS + PC NIT I L S G
Sbjct: 377 SNILYTNIKGTYDIKSPPMHFACSDSVPCTNITLSEIELLPSQG 420
>Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 |
20130731
Length = 388
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 130/236 (55%), Gaps = 9/236 (3%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F + V L +NS ++H + C + T + +++S+PA SPNTDG I SN +
Sbjct: 148 LHFHSCNDLNVRNLRILNSPRSHVSVNMCNHATFSYISISSPATSPNTDGFDISHSNNIL 207
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I NI +GDDCIA+ G+ + V CGPGHGISVGSLG N V D+ V+NCTF
Sbjct: 208 IQDSNIKSGDDCIAVNGGSTFINATRVTCGPGHGISVGSLGGNGANDQVSDVHVRNCTFI 267
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
GT NG RIKT + A +E IV+ NV NPIIIDQ Y + + + V +
Sbjct: 268 GTQNGARIKTVPGG---SGYARKITFEHIVLVNVMNPIIIDQAY-----TLSTLDTAVSV 319
Query: 181 SNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
+V Y G+S ++IA + KCS + + + +N ++ GK S+ C N +G
Sbjct: 320 RDVTYRGFTGTSYSDIAIDLKCSSSGCFKILLDQNNIVSAQPGK-KTSSFCRNAHG 374
>Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 |
20130731
Length = 389
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 133/228 (58%), Gaps = 13/228 (5%)
Query: 11 VHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGD 70
V L +NS ++H + C + T + +++++ A SPNTDG I SN ++I + I +GD
Sbjct: 159 VRNLRILNSPKSHVSVNMCNHSTFSHISINSAAASPNTDGFDISRSNNISIENSKIRSGD 218
Query: 71 DCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
DCIA+ G+ + I V CGPGHGIS+GSLG+N V D+ ++NCTF GT NG RIKT
Sbjct: 219 DCIAVNGGSFFINITRVTCGPGHGISIGSLGRNRLNDKVSDVHIRNCTFIGTTNGARIKT 278
Query: 131 WASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRG 190
+ A +E I++ NV+NPIIIDQ Y P ++V++S+V Y G
Sbjct: 279 VPGG---SGYARQITFEQIILSNVKNPIIIDQGYKISP-----TDTSVKVSSVTYRGFIG 330
Query: 191 SSMTEIAANFKCSRNKPCQNITTE--NIRLTRSGGKGGISNSCNNVNG 236
+S ++IA N CS + C NI + NI T++G K S C N +G
Sbjct: 331 TSASKIAVNLNCS-SPGCFNILLDQNNIVATQAGKK--TSFFCRNAHG 375
>Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 |
20130731
Length = 390
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 127/230 (55%), Gaps = 13/230 (5%)
Query: 11 VHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGD 70
V L NS ++H + C T + +++++P SPNTDG I S + I NI +GD
Sbjct: 160 VSNLSITNSPRSHVAVNMCNGATFSNISINSPGTSPNTDGFDIALSTHIVIHDSNIKSGD 219
Query: 71 DCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
DCIA+ G+ V + CGPGHGISVGSLGK E V +I V+NCTF+ T NG RIKT
Sbjct: 220 DCIAINGGSSFVNATRITCGPGHGISVGSLGKKGSEDKVSNIHVRNCTFNETQNGARIKT 279
Query: 131 WASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRG 190
L A + +E I++ NV NPIIIDQEY + +NV +S+VK+ G
Sbjct: 280 IPGGLG---YAKHITFEQIILVNVNNPIIIDQEY-----SISHKGANVSVSSVKFQGFTG 331
Query: 191 SSMTEIAANFKCSRNKPCQNITTE--NIRLTRSGGKGGISNSCNNVNGAS 238
+S + +A CS + C +I E NI + G K S+ C N +G +
Sbjct: 332 TSASGLAIQLNCSSSG-CYDILLEQNNIVSAQPGKKA--SSFCTNAHGTA 378
>Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr8:2553377-2556933 | 20130731
Length = 389
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 131/228 (57%), Gaps = 13/228 (5%)
Query: 11 VHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGD 70
V L +NS ++H + C + T + +++++ A SPNTDG I S+ V I + I +GD
Sbjct: 159 VRNLRILNSPRSHVAVTMCNHSTFSHISINSAATSPNTDGFDISRSSNVLIENSMIRSGD 218
Query: 71 DCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
DCIAL SG+ + + V CGPGHGIS+G+LG++ V D+ ++NCTF GT NG RIKT
Sbjct: 219 DCIALNSGSFFINVTRVTCGPGHGISIGNLGRSRSNDQVSDVYIRNCTFIGTTNGARIKT 278
Query: 131 WASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRG 190
+ A +E +++ NV NPIIIDQ Y P ++V++S+V Y G
Sbjct: 279 VPGG---SGYARQITFEQVILSNVMNPIIIDQGYKISP-----TDTSVRVSSVTYRGFTG 330
Query: 191 SSMTEIAANFKCSRNKPCQNITTE--NIRLTRSGGKGGISNSCNNVNG 236
+S ++IA N CS + C +I + NI T++G S C N +G
Sbjct: 331 TSASKIAVNLNCS-SSGCFDILLDQNNIVATQAGKM--TSFFCRNAHG 375
>Medtr7g091840.1 | endo polygalacturonase | HC |
chr7:36349369-36347147 | 20130731
Length = 384
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 108/181 (59%), Gaps = 6/181 (3%)
Query: 11 VHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGD 70
V L N++Q H N+T + L +++P DSPNTDGI + + + I+S GD
Sbjct: 202 VENLKIRNAQQIHISFQDSVNVTASGLIVASPEDSPNTDGIHVTNTQNIKISSSIAAAGD 261
Query: 71 DCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
DCI+++ G++ V ++ CGPGHGIS+GSLG + V ++V SGT NG+RIKT
Sbjct: 262 DCISIVDGSRNVEATNITCGPGHGISIGSLGAGKSKDIVSGVMVNGAKISGTTNGVRIKT 321
Query: 131 WASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYP--PCKTQVVSNVQISNVKYTNI 188
W + ASN +++I MDNV NPIIIDQ YC CK Q+ S VQISNV Y +
Sbjct: 322 WPGG---SGIASNITFQNIEMDNVTNPIIIDQNYCDKKKMSCK-QMDSAVQISNVSYLAV 377
Query: 189 R 189
R
Sbjct: 378 R 378
>Medtr8g031180.1 | polygalacturonase | LC | chr8:11659557-11657369 |
20130731
Length = 281
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 11/217 (5%)
Query: 13 RLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDC 72
R NS + H L C + + + +P+ SPNTDG I S V+I I +GDDC
Sbjct: 68 RPRFTNSPKQHITLSDCNGAKFSNIDIQSPSYSPNTDGFDISTSKNVSIEDSTIQSGDDC 127
Query: 73 IALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWA 132
IA+ G+ + + CG GHGIS+GSLG N+ + VE++ V NC+F+ T NG RIKT+
Sbjct: 128 IAVKEGSSYISATRIACGLGHGISIGSLGINESYQTVEEVYVHNCSFTNTTNGARIKTFP 187
Query: 133 SSLSKTLKASNFVYEDIVMDNVENPIIIDQEY-----CPYPPCKTQVVSNVQISNVKYTN 187
+ A N +E I + NV+NPI+I+Q Y + K + S+VQ++NV Y
Sbjct: 188 GG---SGYARNITFEQIQLSNVKNPIVINQFYRAKKRAKHYDIKVEKESSVQVTNVTYRG 244
Query: 188 IRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGK 224
GS + ++A N C+ C NI + + + S K
Sbjct: 245 FNGSYIGDLAINLNCT---SCFNIVLDQVYILSSQDK 278
>Medtr2g032710.2 | polygalacturonase plant-like protein | HC |
chr2:12319301-12315408 | 20130731
Length = 463
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 121/237 (51%), Gaps = 5/237 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++F +N + L NS Q H C+ + + L++SAP SPNTDGI +G + V
Sbjct: 200 IRFFMSSNLVLRGLKIQNSPQFHVKFDGCQGVLIDELSISAPKLSPNTDGIHLGNTRDVG 259
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + I GDDCI++ G V + V C P HGIS+GSLG ++ V ++ V+N
Sbjct: 260 IYNSLISNGDDCISIGPGCSNVNVDGVTCAPTHGISIGSLGVHNSHACVSNLTVRNSIIK 319
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
+DNGLRIKTW T + +++I M+NV N I IDQ YC C Q S V +
Sbjct: 320 ESDNGLRIKTWQGG---TGSVTGLTFDNIQMENVRNCINIDQFYCLSKECMNQ-TSAVYV 375
Query: 181 SNVKYTNIRGS-SMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
+N+ Y I+G+ + +F CS C NIT I L G+ C N G
Sbjct: 376 NNISYRKIKGTYDVRTPPIHFACSDTVACTNITLSEIELLPYEGELVDDPFCWNAYG 432
>Medtr2g032710.1 | polygalacturonase plant-like protein | HC |
chr2:12322300-12315408 | 20130731
Length = 463
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 121/237 (51%), Gaps = 5/237 (2%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
++F +N + L NS Q H C+ + + L++SAP SPNTDGI +G + V
Sbjct: 200 IRFFMSSNLVLRGLKIQNSPQFHVKFDGCQGVLIDELSISAPKLSPNTDGIHLGNTRDVG 259
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFS 120
I + I GDDCI++ G V + V C P HGIS+GSLG ++ V ++ V+N
Sbjct: 260 IYNSLISNGDDCISIGPGCSNVNVDGVTCAPTHGISIGSLGVHNSHACVSNLTVRNSIIK 319
Query: 121 GTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQI 180
+DNGLRIKTW T + +++I M+NV N I IDQ YC C Q S V +
Sbjct: 320 ESDNGLRIKTWQGG---TGSVTGLTFDNIQMENVRNCINIDQFYCLSKECMNQ-TSAVYV 375
Query: 181 SNVKYTNIRGS-SMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
+N+ Y I+G+ + +F CS C NIT I L G+ C N G
Sbjct: 376 NNISYRKIKGTYDVRTPPIHFACSDTVACTNITLSEIELLPYEGELVDDPFCWNAYG 432
>Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 |
20130731
Length = 292
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 106/192 (55%), Gaps = 7/192 (3%)
Query: 11 VHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGD 70
V L NS +H + C T + +++++PA SPNTDG I S + I + NI +GD
Sbjct: 81 VSNLRITNSPSSHVSINMCNRTTFSHVSINSPATSPNTDGFDISFSTDIRIENSNIKSGD 140
Query: 71 DCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
DCIA+ G+ + + V CGPGHGISVGSLGK V D+ V+NCTF T NG RIKT
Sbjct: 141 DCIAVNGGSNFINVTGVTCGPGHGISVGSLGKKRTNDQVSDVHVRNCTFKETQNGARIKT 200
Query: 131 WASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRG 190
+ A + Y+ I++ NV+N IIIDQ Y P +V +S+V Y G
Sbjct: 201 VPGG---SGYARHITYDQIILVNVKNSIIIDQYYNDIIP----QAGDVSVSDVTYRGFTG 253
Query: 191 SSMTEIAANFKC 202
+S ++A C
Sbjct: 254 TSANDLAIQLNC 265
>Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 |
20130731
Length = 346
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 106/192 (55%), Gaps = 7/192 (3%)
Query: 11 VHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGD 70
V L NS +H + C T + +++++PA SPNTDG I S + I + NI +GD
Sbjct: 158 VSNLRITNSPSSHVSINMCNRTTFSHVSINSPATSPNTDGFDISFSTDIRIENSNIKSGD 217
Query: 71 DCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
DCIA+ G+ + + V CGPGHGISVGSLGK V D+ V+NCTF T NG RIKT
Sbjct: 218 DCIAVNGGSNFINVTGVTCGPGHGISVGSLGKKRTNDQVSDVHVRNCTFKETQNGARIKT 277
Query: 131 WASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRG 190
+ A + Y+ I++ NV+N IIIDQ Y P +V +S+V Y G
Sbjct: 278 VPGG---SGYARHITYDQIILVNVKNSIIIDQYYNDIIP----QAGDVSVSDVTYRGFTG 330
Query: 191 SSMTEIAANFKC 202
+S ++A C
Sbjct: 331 TSANDLAIQLNC 342
>Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 |
20130731
Length = 397
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 128/239 (53%), Gaps = 9/239 (3%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F+ ++ L IN H + +++T++ + +S+ DS NTDGI I S VN
Sbjct: 154 LLFERCDGLQLSGLTHINGPAMHVYVVHSQDVTISHINISSSKDSYNTDGIDISNSIRVN 213
Query: 61 ITSVNIGTGDDCIALISGAKKVRIMDVFCGPG-HGISVGSLGKNDGEKDVEDIVVKNCTF 119
I I +GDDCIA+ G++ + + V CGPG HGISVGSLG E+ + + V+NCTF
Sbjct: 214 IHDSIIQSGDDCIAIKGGSQFINVTQVTCGPGTHGISVGSLGGGGAEEFADRVNVRNCTF 273
Query: 120 SGTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQ 179
+G D+ RIKTW A +++ I+++ + NPI I Q Y K V+
Sbjct: 274 NGADSAARIKTWPGGKG---YAKAIIFDHIIVNQIRNPISIQQHYMRGGEQKDA----VK 326
Query: 180 ISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
+S+V ++NI G+ + A C+ N C NIT E I +T K S CNNV G +
Sbjct: 327 VSDVTFSNIYGTCSGDDAIFLDCA-NIGCDNITLEQINITSVDPKKPNSAICNNVQGKA 384
>Medtr2g100040.1 | polygalacturonase | LC | chr2:42942787-42944494 |
20130731
Length = 365
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 109/215 (50%), Gaps = 47/215 (21%)
Query: 3 FDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNIT 62
F F+ NS + + S +SK H +F C+N+T + +APA SPN DG
Sbjct: 148 FYFLNNSIIKGITSKDSKYFHVNVFGCKNLTFMDFSATAPATSPNRDG------------ 195
Query: 63 SVNIGTGDDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGT 122
+K++ I++V CGPGHGISVGSLGK E+ +E I V+NCT T
Sbjct: 196 ----------------SKQITILNVTCGPGHGISVGSLGKYSNEEPLEYITVRNCTLRNT 239
Query: 123 DNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENP-IIIDQEYCPYPPCKTQVVSNVQIS 181
DNGLRIKTW ++ SN +E+I+MDNV NP IIIDQ+
Sbjct: 240 DNGLRIKTWPTTPITYDLVSNLHFENIIMDNVSNPVIIIDQD------------------ 281
Query: 182 NVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENI 216
V + +I G+S T+ CS PC+ + NI
Sbjct: 282 KVTFKDITGTSATQNGVVLICSSGVPCEEVVLSNI 316
>Medtr8g065010.1 | polygalacturonase plant-like protein | HC |
chr8:27299002-27295111 | 20130731
Length = 521
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 112/201 (55%), Gaps = 5/201 (2%)
Query: 18 NSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCIALIS 77
NS Q H C + + +T+S+P DSPNTDGI + S V I + GDDCI++ +
Sbjct: 277 NSPQCHLKFDNCNGVLVHDVTISSPGDSPNTDGIHLQNSRDVLIYKSTMACGDDCISIQT 336
Query: 78 GAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSLSK 137
G V + +V CGPGHGIS+G LGK++ V +I V++ T NG+RIKTW
Sbjct: 337 GCSNVYVHNVDCGPGHGISIGGLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGG--- 393
Query: 138 TLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRGSSMTEIA 197
+ ++ +I + V+ PIIIDQ YC CK Q + V ++ + Y I+G + T
Sbjct: 394 SGSVQGVLFSNIQVSQVQVPIIIDQFYCDKRNCKNQTAA-VALTGINYEGIKG-TYTVKP 451
Query: 198 ANFKCSRNKPCQNITTENIRL 218
+F CS + PC +++ ++ L
Sbjct: 452 VHFACSDSLPCIDVSLTSVEL 472
>Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-14516292 |
20130731
Length = 470
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 119/230 (51%), Gaps = 6/230 (2%)
Query: 10 KVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTG 69
K+ + NS H + + + +T+S+P +SPNTDGI + + V I NIGTG
Sbjct: 199 KIRDIKIKNSPLCHLKFDNSKGIKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGTG 258
Query: 70 DDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIK 129
DDC+++ +G + + + CGPGHGIS+G LGK+ V DI+V++ + T G RIK
Sbjct: 259 DDCVSIQTGCSNIHVHHIKCGPGHGISLGGLGKDKSVACVSDIIVEDISMKNTLYGARIK 318
Query: 130 TWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIR 189
TW N + I + +V P++IDQ YC CK Q V IS VK+ I
Sbjct: 319 TWQGG---NGMVKNVSFSRIKVYDVMYPVMIDQYYCDKQICKNQ-TGTVIISGVKFDQIS 374
Query: 190 GSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNS-CNNVNGAS 238
GS + + CS + PC ++ +I+L S G+ + C N G S
Sbjct: 375 GSYTLQ-PVHLACSNSIPCTDVDLTDIQLRPSLSYRGMQQAMCWNSYGKS 423
>Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-14739416 |
20130731
Length = 534
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 112/201 (55%), Gaps = 5/201 (2%)
Query: 18 NSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCIALIS 77
NS Q H C + + +++S+P DSPNTDGI + S V I S + GDDCI++ +
Sbjct: 290 NSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQT 349
Query: 78 GAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSLSK 137
G V + +V CGPGHGIS+GSLGK++ V +I V++ + NG+RIKTW
Sbjct: 350 GCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHDSMNGVRIKTWQGG--- 406
Query: 138 TLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRGSSMTEIA 197
+ ++ +I + V+ PI+IDQ YC C T S V ++ + Y I+G + T
Sbjct: 407 SGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRVC-TNHTSAVSLAGINYERIKG-TYTVKP 464
Query: 198 ANFKCSRNKPCQNITTENIRL 218
+F CS + PC +++ + L
Sbjct: 465 VHFACSDSLPCVDVSLTTVEL 485
>Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-13559381 |
20130731
Length = 334
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 11 VHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGD 70
V L N+ H + C T +++ +++P +SPNTDG I S + + I TGD
Sbjct: 170 VRNLRITNTPGAHIAINGCIGATFSQILVNSPGNSPNTDGFDISYSKNITVVDSTIATGD 229
Query: 71 DCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
DCIA+ G+ + V CGPGHGIS+GSLGK + + VE++ V+NC F+G+ NG RIKT
Sbjct: 230 DCIAVNGGSSYIYATRVACGPGHGISIGSLGKGNSFEVVEEVHVRNCNFTGSTNGARIKT 289
Query: 131 WASSLSKTLKASNFVYEDIVMDNVENPIIIDQEY 164
+ + A +E I + +V+N IIIDQ Y
Sbjct: 290 FPGG---SGYARKITFEQIQLKDVKNAIIIDQNY 320
>Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 333
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 85/137 (62%)
Query: 10 KVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTG 69
KV L +NS++ H +C + +RL + APA SPNTDGI I + GV I I TG
Sbjct: 195 KVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDGIHISATKGVEIRDSLIRTG 254
Query: 70 DDCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIK 129
DDCI+++ + +V I ++ CGPGHGIS+GSLGK++ + +++++V TDNG+RIK
Sbjct: 255 DDCISIVRNSSRVWIRNISCGPGHGISIGSLGKSNVWEKIQNVIVDGAYLYNTDNGVRIK 314
Query: 130 TWASSLSKTLKASNFVY 146
TW + T+ S Y
Sbjct: 315 TWQVTFFVTVSFSFSFY 331
>Medtr4g119775.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr4:49616778-49617143 | 20130731
Length = 121
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 75 LISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASS 134
+ISG V I +V CGP G SVGSL +DGE DVE+I ++N T S NGLR KTWAS
Sbjct: 1 MISGTGNVWISNVLCGPCRGFSVGSLVNSDGE-DVENIDMRNYTLSCRSNGLRTKTWASP 59
Query: 135 LSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQV 174
LSKT K SNFVYEDI+M+NV I+IDQEYCP C QV
Sbjct: 60 LSKTCKVSNFVYEDIMMNNVYKLIVIDQEYCPNSACNNQV 99
>Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 402
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 28/204 (13%)
Query: 18 NSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCIALIS 77
NS+Q H +C N+ + +T S+P DSPNTDGI + S V I+ G+ C
Sbjct: 183 NSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVIS----GSTLSC----- 233
Query: 78 GAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSLSK 137
GHGIS+GSLGK + + V ++ V++ T T G+RIKTW
Sbjct: 234 --------------GHGISIGSLGKENTKACVSNVTVRDVTLQNTLTGVRIKTWQGG--- 276
Query: 138 TLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRGSSMTEIA 197
+ N ++ +I + +V+ PI+IDQ YC C+ V S V +S++ YTN+ G+ E
Sbjct: 277 SGSVQNIMFSNIQVSDVKTPIMIDQFYCDGGKCR-NVTSAVAVSSIHYTNVHGTYTKE-P 334
Query: 198 ANFKCSRNKPCQNITTENIRLTRS 221
F CS + PC+ IT + I+L S
Sbjct: 335 IYFACSDSLPCKGITLDTIKLESS 358
>Medtr8g010050.1 | pectin lyase superfamily protein | LC |
chr8:2530574-2534406 | 20130731
Length = 356
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 107/228 (46%), Gaps = 43/228 (18%)
Query: 11 VHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGD 70
V L NS ++H + C T + +++++P SPNTDG I S + I NI +GD
Sbjct: 160 VSNLSITNSPRSHVAVNMCNGATFSNISINSPGTSPNTDGFDIALSTHIVIHDSNIKSGD 219
Query: 71 DCIALISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
DCIA+ G+ V + + CGPGHGISVGSLGKN E V DI V+NCTF+ T NG RIKT
Sbjct: 220 DCIAVNGGSTFVNAIRITCGPGHGISVGSLGKNGTEDKVSDIHVRNCTFNETQNGARIKT 279
Query: 131 WASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRG 190
+NV +S+VK+ G
Sbjct: 280 IPG------------------------------------------ANVSVSSVKFRGFTG 297
Query: 191 SSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
+S + +A CS + C +I E + + + S+ C N +G +
Sbjct: 298 TSASGLAIQLNCSSSG-CYDILLEQNNIVSAQPEKAASSFCTNAHGTA 344
>Medtr8g077320.1 | pectin lyase superfamily protein | LC |
chr8:32921813-32926670 | 20130731
Length = 364
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 1 MKFDFITNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVN 60
+ F + V + NS H + C ++ L + +P+ SPNTDG I S +
Sbjct: 131 LSFYACNDLSVRNVRITNSPGAHGTINGCNRAKISNLDVQSPSHSPNTDGFDISSSKNIL 190
Query: 61 ITSVNIGTGDDCIALISGAKKVRI-----------MDVFCGPGHGISVGSLGKNDGEKDV 109
I I TGDDCIA+ G+ + + + V CGPGHGIS+GSLGK + + V
Sbjct: 191 IEDSTIRTGDDCIAINGGSSYISVSRPTRFDSSTRVRVACGPGHGISIGSLGKGNSYETV 250
Query: 110 EDIVVKNCTFSGTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEY 164
E++ V NC+F+ T NG RIKT+ + A +E I + NV+N IIIDQ Y
Sbjct: 251 EEVNVPNCSFTNTTNGARIKTFPGG---SGYAKKITFEQIQLTNVKNTIIIDQHY 302
>Medtr5g034090.2 | polygalacturonase | HC | chr5:14734905-14738756 |
20130731
Length = 416
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 71/114 (62%)
Query: 18 NSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCIALIS 77
NS Q H C + + +++S+P DSPNTDGI + S V I S + GDDCI++ +
Sbjct: 290 NSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQT 349
Query: 78 GAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTW 131
G V + +V CGPGHGIS+GSLGK++ V +I V++ + NG+RIKTW
Sbjct: 350 GCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHDSMNGVRIKTW 403
>Medtr7g072360.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr7:26882621-26883801 | 20130731
Length = 128
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 22/109 (20%)
Query: 22 NHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCIALISGAKK 81
++ +LF CEN TL R + +P+DSPN DGIK+G G
Sbjct: 42 SYIVLFICENTTLRRRKIISPSDSPNIDGIKMGR----------------------GTTN 79
Query: 82 VRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKT 130
VRI ++FCG GH ISVGSLGK + E+D++DI+V NCTFSGT +RIK+
Sbjct: 80 VRISNIFCGFGHEISVGSLGKYESEQDLDDIIVTNCTFSGTSIDVRIKS 128
>Medtr7g072370.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr7:26884331-26884519 | 20130731
Length = 62
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%)
Query: 75 LISGAKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASS 134
++S VRI +VFCG H ISVGSLGK + E+D++DI+V NCTFSGT +RIK+W S
Sbjct: 1 MLSSTTNVRISNVFCGFCHEISVGSLGKYESEQDLDDIIVTNCTFSGTSIDVRIKSWKSQ 60
Query: 135 L 135
L
Sbjct: 61 L 61
>Medtr1g100040.1 | pectin lyase superfamily protein | HC |
chr1:45076650-45074575 | 20130731
Length = 481
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 17/240 (7%)
Query: 10 KVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTG 69
++ L INS N+ + LT+ AP D PNTDGI V I I +G
Sbjct: 204 QISNLTLINSPSWFVHPVYSSNIIINGLTILAPVDIPNTDGIDPDSCTNVRIEDNYIVSG 263
Query: 70 DDCIALISGAKKVRIMDVFCGPGHGISVGSLG-----------KNDGEKDVEDIVVKNCT 118
DDCIA+ SG + I F P I + L ++ ++D+ V++ T
Sbjct: 264 DDCIAIKSGWDEYGIK--FGKPSQQIIIRRLTCISPKSAMVALGSEMSGGIQDVRVEDVT 321
Query: 119 FSGTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNV 178
T++ +RIKT ++ + + + + +D ++ + Y +P +
Sbjct: 322 AIKTESAVRIKT---AIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHPDNGFDPNALP 378
Query: 179 QISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
+IS + Y ++ ++T IA N P I N + S K + +C +V+G +
Sbjct: 379 KISEINYRDVTAKNVT-IAGKLDGISNDPFTGICVSNATIEMSAHKKKLPWNCTDVSGVT 437
>Medtr4g124980.1 | pectin lyase superfamily protein | HC |
chr4:51842179-51838098 | 20130731
Length = 492
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 27 FACENMTLTRLTLSAPA-DSPNTDGIKIGESNGVNITSVNIGTGDDCIALISGAKK---- 81
+ C+N+T+ +T+ AP ++PNTDGI + I I GDD IA+ SG +
Sbjct: 239 YDCKNLTIKGVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIA 298
Query: 82 ---------VRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWA 132
+R + V GIS+GS + + ++ V+N + G+RIKT
Sbjct: 299 YGRPSMNIMIRNLVVRSMVSAGISIGS----EMSGGISNVTVENLLVWDSRRGVRIKT-- 352
Query: 133 SSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRGSS 192
+ + Y +I +NV I++ +Y +P + I ++ +TN+ G
Sbjct: 353 -APGRGGYVRQITYRNITFENVRVGIVMKTDYNEHPDDGYDPTALPVIRDISFTNVYGHG 411
Query: 193 MTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
+ + S P +N+T ++ + + K I C V+G
Sbjct: 412 V-RVPVRIHGSEEIPVRNVTFRDMSVGLTYKKKHIFQ-CAFVHG 453
>Medtr1g100050.1 | pectin lyase superfamily protein | HC |
chr1:45079785-45077811 | 20130731
Length = 473
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 21/242 (8%)
Query: 10 KVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTG 69
++ L INS N+ + LT+ AP DSPNTDGI V I I +G
Sbjct: 198 QISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSG 257
Query: 70 DDCIALISG-----------AKKVRIMDVFC-GPGHG-ISVGSLGKNDGEKDVEDIVVKN 116
DDCIA+ SG ++++ I + C P +++GS + ++D+ +++
Sbjct: 258 DDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGS----EMSGGIQDVRIED 313
Query: 117 CTFSGTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVS 176
T T++ +RIK S++ + + + + ++ ++ + Y +P +
Sbjct: 314 VTAINTESAIRIK---SAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNA 370
Query: 177 NVQISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
+IS + Y ++ ++T IA + N P I N+ + S K + +C +++G
Sbjct: 371 LPKISGINYRDVTAKNVT-IAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISG 429
Query: 237 AS 238
+
Sbjct: 430 VT 431
>Medtr2g042740.1 | pectin lyase superfamily protein | HC |
chr2:18636698-18641564 | 20130731
Length = 474
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 27 FACENMTLTRLTLSAPA-DSPNTDGIKIGESNGVNITSVNIGTGDDCIALISGAKK---- 81
+ C+N+T+ +T+ AP +PNTDGI + I I GDD IA+ SG +
Sbjct: 221 YDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIA 280
Query: 82 ---------VRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWA 132
+R + V GIS+GS + V ++ ++N + +RIKT
Sbjct: 281 YAKPSKNIIIRNLVVRSNVSAGISIGS----EMSGGVSNVTIENILVWESRRAIRIKT-- 334
Query: 133 SSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRGSS 192
+ + Y +I NV I+I +Y +P + + ++ +TNIRG
Sbjct: 335 -APGRGGYVRQITYRNITFHNVRVGIVIKTDYNEHPDDGYDPTALPILRDISFTNIRGEG 393
Query: 193 MTEIAANFKCSRNKPCQNITTENI 216
+ + S P +N+T ++
Sbjct: 394 V-RVPVRITGSEEIPVRNVTFHDM 416
>Medtr1g099850.1 | pectin lyase superfamily protein | HC |
chr1:45068986-45067030 | 20130731
Length = 475
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 17/240 (7%)
Query: 10 KVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTG 69
++ L INS N+ + RLT+ AP D PNTDGI V I I +G
Sbjct: 203 QISNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVLIEDNYIVSG 262
Query: 70 DDCIALISG-----------AKKVRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKNCT 118
DDCIA+ SG ++K+ + + C V +LG ++ ++DI +++ T
Sbjct: 263 DDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMV-ALG-SEMSGGIQDIRIEDIT 320
Query: 119 FSGTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVSNV 178
T++ +RIKT ++ + + + + ++ ++ + Y + +
Sbjct: 321 AINTESAVRIKT---AVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAENGFDPKALP 377
Query: 179 QISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNGAS 238
+IS + Y +I ++T IA N P I N+ + S K + +C +V+G +
Sbjct: 378 KISGINYRDIIAKNVT-IAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWNCTDVSGVA 436
>Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 25/185 (13%)
Query: 29 CENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCIALISGAKKVRI---- 84
C +T+ +T+ AP DSPNTDGI S+ V I I TGDD IA+ SG + I
Sbjct: 210 CSQVTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGR 269
Query: 85 ------MDVFCGPGH---GISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSL 135
+ G H GI++GS + V D+ ++ F + +RIKT S
Sbjct: 270 PSTNIVIHRLVGKTHTSAGIAIGS----EMSGGVSDVRAEDIHFYDSYTAIRIKT---SP 322
Query: 136 SKTLKASNFVYEDIVMDNVENPIIIDQEYCPYP-----PCKTQVVSNVQISNVKYTNIRG 190
+ N ++ + NV+ I Y +P P V+ + I +V NI
Sbjct: 323 GRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYDPNALPVIEKITIEDVIGENITK 382
Query: 191 SSMTE 195
+ + E
Sbjct: 383 AGLIE 387
>Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 25/185 (13%)
Query: 29 CENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCIALISGAKKVRI---- 84
C +T+ +T+ AP DSPNTDGI S+ V I I TGDD IA+ SG + I
Sbjct: 210 CSQVTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGR 269
Query: 85 ------MDVFCGPGH---GISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSL 135
+ G H GI++GS + V D+ ++ F + +RIKT S
Sbjct: 270 PSTNIVIHRLVGKTHTSAGIAIGS----EMSGGVSDVRAEDIHFYDSYTAIRIKT---SP 322
Query: 136 SKTLKASNFVYEDIVMDNVENPIIIDQEYCPYP-----PCKTQVVSNVQISNVKYTNIRG 190
+ N ++ + NV+ I Y +P P V+ + I +V NI
Sbjct: 323 GRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYDPNALPVIEKITIEDVIGENITK 382
Query: 191 SSMTE 195
+ + E
Sbjct: 383 AGLIE 387
>Medtr1g100060.1 | pectin lyase superfamily protein | HC |
chr1:45084624-45082095 | 20130731
Length = 516
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 21/242 (8%)
Query: 10 KVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTG 69
++ L +NS N+ + LT+ AP D PNTDGI S V I I +G
Sbjct: 241 QISNLTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSG 300
Query: 70 DDCIALISGAKK-------------VRIMDVFCGPGHGISVGSLGKNDGEKDVEDIVVKN 116
DDCIA+ SG + VR + +++GS + ++D+ +++
Sbjct: 301 DDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGS----EMSGGIQDVRIED 356
Query: 117 CTFSGTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCPYPPCKTQVVS 176
T T++ +RIK S++ + + + + ++ ++ + Y +P +
Sbjct: 357 VTAINTESAVRIK---SAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNA 413
Query: 177 NVQISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGISNSCNNVNG 236
+IS + Y ++ ++T IA + N P I N+ + S K + +C +++G
Sbjct: 414 LPKISGINYRDVTAKNVT-IAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISG 472
Query: 237 AS 238
+
Sbjct: 473 VT 474
>Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:11065754-11061041 | 20130731
Length = 479
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 41 APADSPNTDGIKIGESNGVNITSVNIGTGDDCIALISG-----------AKKVRIMDVFC 89
AP SPNTDGI I I +GDDC+A+ SG K++ I + C
Sbjct: 234 APIRSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTC 293
Query: 90 GPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSLSKTLKASNFVYEDI 149
+ ++ +LG ++ ++D+ ++ T T++G+RIKT ++ + + + +
Sbjct: 294 ISPYSATI-ALG-SEMSGGIQDVRAEDITAVHTESGIRIKT---AVGRGGYVKDIYVKKM 348
Query: 150 VMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRGSSMTEIAANFKCSRNKPCQ 209
M ++ I Y + + +I N+ Y ++ +++ +A N + N P
Sbjct: 349 TMHTMKWAFWITGNYGSHADKNYNHSALPEIKNIHYRDMVADNVS-MAGNLEGISNDPFT 407
Query: 210 NITTENIRLTRSGGKGGISNSCNNVNG 236
I N+ +T + +CN++ G
Sbjct: 408 GICISNVTITMAAKAKKQPWTCNDIEG 434
>Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:29762570-29765948 | 20130731
Length = 483
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 41 APADSPNTDGIKIGESNGVNITSVNIGTGDDCIALISG-----------AKKVRIMDVFC 89
AP SPNTDGI I I +GDDC+A+ SG K++ I + C
Sbjct: 234 APISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTC 293
Query: 90 GPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSLSKTLKASNFVYEDI 149
++ +LG ++ ++D+ ++ T T++G+RIKT ++ + + +
Sbjct: 294 ISPFSATI-ALG-SEMSGGIQDVRAEDITAIRTESGVRIKT---AVGRGGYVKDIYVKRF 348
Query: 150 VMDNVENPIIIDQEYCPYPPCKTQVVSNVQISNVKYTNIRGSSMTEIAANFKCSRNKPCQ 209
M ++ + +Y + + +I+N+ Y ++ ++T IAA F+ N P +
Sbjct: 349 TMHTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVT-IAARFQGISNDPFK 407
Query: 210 NITTENIRLTRSGGKGGISNSCNNVNGAS 238
I N+ L + S +C ++ G +
Sbjct: 408 GICIANVTLGMAVKAKKRSWTCTDIEGMT 436
>Medtr7g088550.1 | pectin lyase superfamily protein | HC |
chr7:34506744-34504347 | 20130731
Length = 476
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 17/134 (12%)
Query: 10 KVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTG 69
++ L INS N+ + LT+ AP DSPNTDGI S V I I +G
Sbjct: 198 QISNLTLINSPSWFVHPTYSSNIIIKGLTILAPVDSPNTDGIDPDSSTNVRIEDNYIVSG 257
Query: 70 DDCIALISG-----------AKKVRIMDVFC-GPGHG-ISVGSLGKNDGEKDVEDIVVKN 116
DDCIA+ SG +K++ I + C P I++GS + +E++ V++
Sbjct: 258 DDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGS----EMSGGIENVRVED 313
Query: 117 CTFSGTDNGLRIKT 130
T T++ +RIK+
Sbjct: 314 VTAINTESAVRIKS 327
>Medtr2g103830.1 | polygalacturonase | LC | chr2:44701852-44702052 |
20130731
Length = 66
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 103 NDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSLSKTLKA 141
ND +DVE+I VKNCTF T + +RIKTWAS L K L A
Sbjct: 23 NDDGEDVENINVKNCTFYNTSDCVRIKTWASQLKKMLSA 61
>Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:41331762-41334923 | 20130731
Length = 470
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 33/250 (13%)
Query: 8 NSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIG 67
N ++ L +NS + N+ + +T+ AP +SPNTDGI I I
Sbjct: 190 NIQISNLTLVNSPSWNVHPVYSSNIIVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIV 249
Query: 68 TGDDCIALISG-----------AKKVRIMDVFC-GPGHGISVGSLGKNDGEKDV--EDIV 113
+GDDC+A+ SG K++ I + C P + + G +DV EDIV
Sbjct: 250 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDIV 309
Query: 114 VKNCTFSGTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENPIIIDQEYCP-----YP 168
N +++G+RIKT ++ + + + M ++ + +Y Y
Sbjct: 310 AIN-----SESGVRIKT---AVGRGGYVKDIYVRRMTMKTMKWAFWMTGDYGSHADNNYD 361
Query: 169 PCKTQVVSNVQISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGIS 228
P VV N+ ++ N+ +AA + N P I N+ + + +
Sbjct: 362 PNAIPVVQNINYRDMVAENV------TMAAKLEGISNAPFTGICISNVTIGLAKKAKKLP 415
Query: 229 NSCNNVNGAS 238
+C + G S
Sbjct: 416 WNCTYIAGVS 425
>Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:16895715-16889169 | 20130731
Length = 451
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 93/228 (40%), Gaps = 31/228 (13%)
Query: 29 CENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNIGTGDDCIALISGAKKVRIM--- 85
C N+ + +T+ AP DSPNTDGI S+ V I I TGDD +A+ SG I
Sbjct: 214 CSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDAYGISYGR 273
Query: 86 ---DVFC------GPGHGISVGSLGKNDGEKDVEDIVVKNCTFSGTDNGLRIKTWASSLS 136
D+ P GI+VGS + V++++ ++ G+ IKT ++
Sbjct: 274 PSNDITIRRITGSSPFAGIAVGS----ETSGGVQNVLAEHINLFNMGVGIHIKT---NIG 326
Query: 137 KTLKASNFVYEDIVMDNVENPIIIDQEYCPYP-----PCKTQVVSNVQISNVKYTNIRGS 191
+ N ++ ++N I I + +P P VV + I +V + +
Sbjct: 327 RGGLIKNITVSNVYIENSRQGIKIAGDVGDHPDENFNPNALPVVKGITIKSVWGVKVLQA 386
Query: 192 SMTEIAANFKCSRNKPCQNITTENIRLTRSGGKG-GISNSCNNVNGAS 238
+ RN P I +I L G G C++V G S
Sbjct: 387 GLIH------GLRNSPFTEICFYDINLHGETGSGRSPPWKCSDVFGFS 428
>Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr4:49981535-49985560 | 20130731
Length = 459
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 32/250 (12%)
Query: 7 TNSKVHRLHSINSKQNHFMLFACENMTLTRLTLSAPADSPNTDGIKIGESNGVNITSVNI 66
T+ V L +N+ + C N+ + +++ AP +SP T GI S+ V I I
Sbjct: 185 TDVVVSNLTFLNAPAYNIHPVYCRNVHIHNISIFAPPESPYTVGIVPDSSDHVCIEDCTI 244
Query: 67 GTGDDCIALISGAKK-------------VRIMDVFCGPGHGISVGSLGKNDGEKDVEDIV 113
TG D IAL SG + +R + + G ++ GS D + ++
Sbjct: 245 ATGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQASYGSTLAFGS----DMSGGISNVF 300
Query: 114 VKNCTFSGTDNGLRIKTWASSLSKTLKASNFVYEDIVMDNVENP----IIIDQEYC-PYP 168
V++ + G+ +T++ +DI++ ++E I YC +P
Sbjct: 301 VEHVHLYNSKGGIEF--------RTIRGRGGYMKDIILSDIEMKNIYRAISATGYCGSHP 352
Query: 169 PCKTQVVSNVQISNVKYTNIRGSSMTEIAANFKCSRNKPCQNITTENIRLTRSGGKGGIS 228
K + + + + +I G+++T IA +F + P NI NI L+ + S
Sbjct: 353 DDKFDPNALPLLDHFIFQDIIGTNIT-IAGSFAGLQESPFTNICLSNITLSVNYAS-STS 410
Query: 229 NSCNNVNGAS 238
C+NV+G S
Sbjct: 411 WECSNVSGFS 420