Miyakogusa Predicted Gene

Lj0g3v0354109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0354109.1 tr|G7IHK9|G7IHK9_MEDTR Riboflavin biosynthesis
protein ribBA OS=Medicago truncatula GN=MTR_2g096330 ,77.63,0,GTP
CYCLOHYDROLASE II,NULL; GTP CYCLOHYDROLASE II-RELATED,NULL;
GTP_cyclohydro2,GTP cyclohydrolase I,CUFF.24379.1
         (531 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g096330.1 | 3,4-dihydroxy-2-butanone 4-phosphate synthase ...   860   0.0  
Medtr2g009270.1 | 3,4-dihydroxy-2-butanone 4-phosphate synthase ...   592   e-169
Medtr4g094130.1 | 3,4-dihydroxy-2-butanone 4-phosphate synthase ...   582   e-166
Medtr4g094130.2 | 3,4-dihydroxy-2-butanone 4-phosphate synthase ...   561   e-160

>Medtr2g096330.1 | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
           HC | chr2:41150203-41153044 | 20130731
          Length = 507

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/511 (82%), Positives = 452/511 (88%), Gaps = 5/511 (0%)

Query: 1   MDSASFPHPLISQVITSSSFHRSYPNHQSARFSLWNNRLWNSALCATGYSAAGIEDVFDD 60
           MDSASFP PLIS VIT+SS HRS   H SARF LWNN++ N A  A G+S  G EDVFDD
Sbjct: 1   MDSASFPGPLISHVITNSSLHRSCTTHHSARFGLWNNKVRNLAFYAIGFSKVGTEDVFDD 60

Query: 61  S-NLKRNDNGSFFGALAPFETLKAEITPETNDFFVSDAEGDPDCPSEGYSSVEQALNTLR 119
           S +LK N+NGS    L      + EI  ET+DFFVS+AEGDPDCPS+GYSS+E ALN L 
Sbjct: 61  SGDLKENENGSLLKTL----NAEKEIKQETDDFFVSEAEGDPDCPSKGYSSIEHALNALH 116

Query: 120 QGKFVIVVDDENGDIQGNLIMAASLTSTKDVAFMVKHGSGIVSVGMKEEDLQRLNLPLMS 179
           QGKFVIVVDDEN +++GNLI AASL STKDVAFM+KHGSGIVSVGMKEEDLQRLNLPLMS
Sbjct: 117 QGKFVIVVDDENNNVEGNLIKAASLISTKDVAFMIKHGSGIVSVGMKEEDLQRLNLPLMS 176

Query: 180 PETEDEDSSAPTFTITVDAKYGTSTGVSAADRAKTVLALSSPVSTSEDFIKPGHVFPLKY 239
           PETE+EDSSAPTFTITVDAK+GTSTGVSAADRAKT+LALSSP S SED  KPGHVFPLKY
Sbjct: 177 PETEEEDSSAPTFTITVDAKFGTSTGVSAADRAKTILALSSPESKSEDLRKPGHVFPLKY 236

Query: 240 RNGGVLRRAGHTEASVDLVTLAGLSPVSVLTALVDEDGGSMASLPYLRKLAFEYSIPIVS 299
           RNGGVLRRAGHTEASVDLV LAGL P SVLTALVD + G+MASLP L+ LA EY++PIVS
Sbjct: 237 RNGGVLRRAGHTEASVDLVALAGLPPFSVLTALVDVEDGNMASLPNLKNLALEYNLPIVS 296

Query: 300 ITDLIRYRRKREKLVERTSVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKGDIGDGQDVLV 359
           ITDLIRYRRKREKLVERT VS LPTKWGLFQAYCY SKLDGTEH+A+VKG+IGDGQDVLV
Sbjct: 297 ITDLIRYRRKREKLVERTYVSHLPTKWGLFQAYCYSSKLDGTEHVAVVKGNIGDGQDVLV 356

Query: 360 RVHSECLTGDIFGSARCDCGDQLDLAMRLIEEAGRGVVVYLRGHEGRGIGLGHKLKAYNL 419
           RVHSECLTGDIFGSARCDCG QLDLAM LIEEAGRGV+VYLRGHEGRGIGLGHKL+AYNL
Sbjct: 357 RVHSECLTGDIFGSARCDCGQQLDLAMELIEEAGRGVIVYLRGHEGRGIGLGHKLQAYNL 416

Query: 420 QDQGHDTVQANIELGLAVDAREYGIGAQILGDIGVRTMRLMTNNPAKFTGLKGYGLAVLG 479
           QDQG DTVQANI+LGLAVDAREYGIGAQIL DIGVRTMRLMTNNPAKF GLKGYGLAV G
Sbjct: 417 QDQGRDTVQANIDLGLAVDAREYGIGAQILRDIGVRTMRLMTNNPAKFVGLKGYGLAVTG 476

Query: 480 RVPVMTPITEENKRYLETKRTKMGHVYGSDI 510
           RVPV+TPIT+ NKRYLETKRTKMGH+YGSDI
Sbjct: 477 RVPVLTPITDANKRYLETKRTKMGHIYGSDI 507


>Medtr2g009270.1 | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
           HC | chr2:1848020-1852661 | 20130731
          Length = 541

 Score =  592 bits (1525), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 287/421 (68%), Positives = 344/421 (81%), Gaps = 2/421 (0%)

Query: 92  FFVSD-AEGDPDCPSEGYSSVEQALNTLRQGKFVIVVDDENGDIQGNLIMAASLTSTKDV 150
           FF +D  + D D P+EG+SS+ +A+  +RQGK V+VVDDE+ + +G+LIMAA L + + +
Sbjct: 104 FFSADYNDYDLDIPAEGFSSIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAAELATPEAM 163

Query: 151 AFMVKHGSGIVSVGMKEEDLQRLNLPLMSPETEDEDSSAPTFTITVDAKYGTSTGVSAAD 210
           AF+VKHG+GIV V M EEDL RL LPLM     + D     FT+TVDAK+GT+TGVSA D
Sbjct: 164 AFIVKHGTGIVCVSMNEEDLDRLELPLMVDSKANADKLRTAFTVTVDAKHGTTTGVSAQD 223

Query: 211 RAKTVLALSSPVSTSEDFIKPGHVFPLKYRNGGVLRRAGHTEASVDLVTLAGLSPVSVLT 270
           RA TVLAL+S  ST  DF +PGH+FPLKYR+GGVL+RAGHTEAS DL  LAGL PV+VL 
Sbjct: 224 RATTVLALASRDSTPADFNRPGHIFPLKYRDGGVLKRAGHTEASADLTILAGLEPVAVLC 283

Query: 271 ALVDEDGGSMASLPYLRKLAFEYSIPIVSITDLIRYRRKREKLVERTSVSRLPTKWGLFQ 330
            +VD+DG SMA LP LR+ A   ++ IVSI DLIRYRRKR++LVER+S +R+PT WG F 
Sbjct: 284 EIVDDDG-SMARLPKLREFAKRENLKIVSIADLIRYRRKRDQLVERSSAARIPTMWGPFT 342

Query: 331 AYCYRSKLDGTEHIAIVKGDIGDGQDVLVRVHSECLTGDIFGSARCDCGDQLDLAMRLIE 390
           +YCY+S LDG EHIA+VKGDIGDG+DVLVRVHSECLTGDIFGSARCDCG+QL LAM  IE
Sbjct: 343 SYCYKSLLDGIEHIAMVKGDIGDGEDVLVRVHSECLTGDIFGSARCDCGNQLALAMEQIE 402

Query: 391 EAGRGVVVYLRGHEGRGIGLGHKLKAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILG 450
            AGRGV+VYLRGHEGRGIGLGHKL+AYNLQD G DTV+AN ELGL VD+REYGIGAQIL 
Sbjct: 403 AAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILR 462

Query: 451 DIGVRTMRLMTNNPAKFTGLKGYGLAVLGRVPVMTPITEENKRYLETKRTKMGHVYGSDI 510
           D+GV++M+LMTNNP K+ GLKGYGL V GR+P++T IT ENKRYLETKRTKMGHVYG ++
Sbjct: 463 DLGVQSMKLMTNNPTKYVGLKGYGLTVSGRIPLLTLITSENKRYLETKRTKMGHVYGMEL 522

Query: 511 Q 511
            
Sbjct: 523 N 523


>Medtr4g094130.1 | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
           HC | chr4:37272852-37266199 | 20130731
          Length = 535

 Score =  582 bits (1499), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 280/428 (65%), Positives = 346/428 (80%), Gaps = 2/428 (0%)

Query: 104 PSEGYSSVEQALNTLRQGKFVIVVDDENGDIQGNLIMAASLTSTKDVAFMVKHGSGIVSV 163
           P++G++S+ +A+  +R GK V+VVDDE+ + +G+LIMAA L + + +AF+VKHG+GIV +
Sbjct: 110 PTKGFASIPEAIEDIRNGKMVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCI 169

Query: 164 GMKEEDLQRLNLPLMSPETEDEDSSAPTFTITVDAKYGTSTGVSAADRAKTVLALSSPVS 223
            MKEEDL+RL LPLM    ++++     FT+TVDAKYGT+TGVSA DRA TVLAL+S  S
Sbjct: 170 SMKEEDLERLELPLMVNSRDNDEKLRTAFTVTVDAKYGTTTGVSAQDRATTVLALASKDS 229

Query: 224 TSEDFIKPGHVFPLKYRNGGVLRRAGHTEASVDLVTLAGLSPVSVLTALVDEDGGSMASL 283
              DF +PGH+FPLKY+ GG+L+RAGHTEASVDL  LAGL PV+VL  +VD+DG SMA L
Sbjct: 230 KPSDFNRPGHIFPLKYKEGGILKRAGHTEASVDLAVLAGLDPVAVLCEVVDDDG-SMARL 288

Query: 284 PYLRKLAFEYSIPIVSITDLIRYRRKREKLVERTSVSRLPTKWGLFQAYCYRSKLDGTEH 343
           P LR+ A   ++ I+SI DLIRYRRKR+KLVER   + +PT WG F+A CYRS LDG EH
Sbjct: 289 PKLRQFAERENLKIISIVDLIRYRRKRDKLVERAGAALIPTMWGPFEANCYRSLLDGMEH 348

Query: 344 IAIVKGDIGDGQDVLVRVHSECLTGDIFGSARCDCGDQLDLAMRLIEEAGRGVVVYLRGH 403
           IA+VKGDIGDG DVLVRVHSECLTGDIFGSARCDCG+QL LAM+ IE AGRGV+VYLRGH
Sbjct: 349 IAMVKGDIGDGCDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGH 408

Query: 404 EGRGIGLGHKLKAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILGDIGVRTMRLMTNN 463
           EGRGIGLGHKL+AYNLQD+G DTV+AN ELGL VD+REYGIGAQIL D+GVR+M+LMTNN
Sbjct: 409 EGRGIGLGHKLRAYNLQDEGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNN 468

Query: 464 PAKFTGLKGYGLAVLGRVPVMTPITEENKRYLETKRTKMGHVYGSDIQGSLPGFNNSIVN 523
           PAK+ GLKGYGL++ GR+P+++ IT EN+RYLETKR KMGH+YG +    L G N S V+
Sbjct: 469 PAKYVGLKGYGLSISGRIPLLSLITNENRRYLETKRVKMGHMYGLEFNSKLNG-NASSVD 527

Query: 524 DQDLPENT 531
           D +    T
Sbjct: 528 DSNTAPGT 535


>Medtr4g094130.2 | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
           HC | chr4:37272852-37266199 | 20130731
          Length = 407

 Score =  561 bits (1447), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/409 (66%), Positives = 331/409 (80%), Gaps = 2/409 (0%)

Query: 123 FVIVVDDENGDIQGNLIMAASLTSTKDVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPET 182
            V+VVDDE+ + +G+LIMAA L + + +AF+VKHG+GIV + MKEEDL+RL LPLM    
Sbjct: 1   MVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCISMKEEDLERLELPLMVNSR 60

Query: 183 EDEDSSAPTFTITVDAKYGTSTGVSAADRAKTVLALSSPVSTSEDFIKPGHVFPLKYRNG 242
           ++++     FT+TVDAKYGT+TGVSA DRA TVLAL+S  S   DF +PGH+FPLKY+ G
Sbjct: 61  DNDEKLRTAFTVTVDAKYGTTTGVSAQDRATTVLALASKDSKPSDFNRPGHIFPLKYKEG 120

Query: 243 GVLRRAGHTEASVDLVTLAGLSPVSVLTALVDEDGGSMASLPYLRKLAFEYSIPIVSITD 302
           G+L+RAGHTEASVDL  LAGL PV+VL  +VD+DG SMA LP LR+ A   ++ I+SI D
Sbjct: 121 GILKRAGHTEASVDLAVLAGLDPVAVLCEVVDDDG-SMARLPKLRQFAERENLKIISIVD 179

Query: 303 LIRYRRKREKLVERTSVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKGDIGDGQDVLVRVH 362
           LIRYRRKR+KLVER   + +PT WG F+A CYRS LDG EHIA+VKGDIGDG DVLVRVH
Sbjct: 180 LIRYRRKRDKLVERAGAALIPTMWGPFEANCYRSLLDGMEHIAMVKGDIGDGCDVLVRVH 239

Query: 363 SECLTGDIFGSARCDCGDQLDLAMRLIEEAGRGVVVYLRGHEGRGIGLGHKLKAYNLQDQ 422
           SECLTGDIFGSARCDCG+QL LAM+ IE AGRGV+VYLRGHEGRGIGLGHKL+AYNLQD+
Sbjct: 240 SECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDE 299

Query: 423 GHDTVQANIELGLAVDAREYGIGAQILGDIGVRTMRLMTNNPAKFTGLKGYGLAVLGRVP 482
           G DTV+AN ELGL VD+REYGIGAQIL D+GVR+M+LMTNNPAK+ GLKGYGL++ GR+P
Sbjct: 300 GRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLSISGRIP 359

Query: 483 VMTPITEENKRYLETKRTKMGHVYGSDIQGSLPGFNNSIVNDQDLPENT 531
           +++ IT EN+RYLETKR KMGH+YG +    L G N S V+D +    T
Sbjct: 360 LLSLITNENRRYLETKRVKMGHMYGLEFNSKLNG-NASSVDDSNTAPGT 407