Miyakogusa Predicted Gene

Lj0g3v0354089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0354089.1 tr|G7KD70|G7KD70_MEDTR Yellow stripe-like protein
2.8 OS=Medicago truncatula GN=MTR_5g091600 PE=4
SV,84.81,9e-31,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
OPT,Oligopeptide transporter OPT superfamily; seg,N,CUFF.24375.1
         (79 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091600.1 | OPT family oligopeptide transporter | HC | chr...   101   2e-22
Medtr3g063490.1 | OPT family oligopeptide transporter | HC | chr...    97   4e-21
Medtr3g063520.1 | OPT family oligopeptide transporter | HC | chr...    96   9e-21
Medtr6g077870.1 | OPT family oligopeptide transporter | HC | chr...    86   6e-18
Medtr6g077870.2 | OPT family oligopeptide transporter | HC | chr...    86   7e-18
Medtr7g028250.1 | OPT family oligopeptide transporter | HC | chr...    75   1e-14
Medtr3g092090.2 | OPT family oligopeptide transporter | HC | chr...    69   1e-12
Medtr3g092090.1 | OPT family oligopeptide transporter | HC | chr...    69   1e-12
Medtr1g007580.1 | OPT family oligopeptide transporter | HC | chr...    62   2e-10
Medtr0312s0020.1 | OPT family oligopeptide transporter | HC | sc...    59   1e-09
Medtr1g007540.1 | OPT family oligopeptide transporter | HC | chr...    59   1e-09
Medtr1g077840.1 | OPT family oligopeptide transporter | HC | chr...    51   2e-07

>Medtr5g091600.1 | OPT family oligopeptide transporter | HC |
           chr5:39940849-39945041 | 20130731
          Length = 682

 Score =  101 bits (252), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/79 (65%), Positives = 56/79 (70%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MSP IAKQ  EA TA D+K  GLGWM+A                RKIMIVDFKLTYPSGT
Sbjct: 130 MSPTIAKQIPEAGTANDVKSLGLGWMIAFLFVVSFLGLFSVVPLRKIMIVDFKLTYPSGT 189

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHT+EGA+LAK
Sbjct: 190 ATAHLINSFHTSEGAKLAK 208


>Medtr3g063490.1 | OPT family oligopeptide transporter | HC |
           chr3:28742126-28738063 | 20130731
          Length = 696

 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 55/79 (69%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           M+P IAKQ  E + + D+KI GLGWM+A                RKIMIVDF LTYPSGT
Sbjct: 144 MTPTIAKQIPEFDGSNDVKILGLGWMIAFLFVVSFLGLFSVLPLRKIMIVDFGLTYPSGT 203

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHT+EGA+LAK
Sbjct: 204 ATAHLINSFHTSEGAKLAK 222


>Medtr3g063520.1 | OPT family oligopeptide transporter | HC |
           chr3:28751377-28748059 | 20130731
          Length = 690

 Score = 95.5 bits (236), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/79 (62%), Positives = 55/79 (69%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MSP IAKQ  E ++A D+K  GLGWM+A                RKIMIVDF LTYPSGT
Sbjct: 138 MSPTIAKQIPEFDSANDVKSLGLGWMIAFLFVVSFLGLFSVLPLRKIMIVDFGLTYPSGT 197

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHT+EGA+LAK
Sbjct: 198 ATAHLINSFHTSEGAKLAK 216


>Medtr6g077870.1 | OPT family oligopeptide transporter | HC |
           chr6:29250716-29244648 | 20130731
          Length = 712

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 3/79 (3%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MS  +A QSS+ +   D K P LGW++A                RKIM++DFKLTYPSGT
Sbjct: 162 MSEHVATQSSDTS---DFKDPKLGWIIAFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGT 218

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHT +GA+LAK
Sbjct: 219 ATAHLINSFHTPQGAKLAK 237


>Medtr6g077870.2 | OPT family oligopeptide transporter | HC |
          chr6:29249296-29244648 | 20130731
          Length = 551

 Score = 85.9 bits (211), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 3/79 (3%)

Query: 1  MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
          MS  +A QSS+ +   D K P LGW++A                RKIM++DFKLTYPSGT
Sbjct: 1  MSEHVATQSSDTS---DFKDPKLGWIIAFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGT 57

Query: 61 ATAHLINSFHTTEGARLAK 79
          ATAHLINSFHT +GA+LAK
Sbjct: 58 ATAHLINSFHTPQGAKLAK 76


>Medtr7g028250.1 | OPT family oligopeptide transporter | HC |
           chr7:9531538-9523159 | 20130731
          Length = 679

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 42/67 (62%)

Query: 12  ANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINSFHT 71
            N A D+K PGLGWM+                 RK+M++D+KLTYPSGTATA LINSFHT
Sbjct: 148 GNRAEDVKNPGLGWMIGFMFVVSFLGLFSLVPLRKVMVLDYKLTYPSGTATAMLINSFHT 207

Query: 72  TEGARLA 78
             GA LA
Sbjct: 208 KTGAELA 214


>Medtr3g092090.2 | OPT family oligopeptide transporter | HC |
           chr3:42037744-42043679 | 20130731
          Length = 664

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/76 (47%), Positives = 42/76 (55%)

Query: 4   EIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATA 63
           E A   +  NT    K P +GWM A                RKIMI+D+KLTYPSGTATA
Sbjct: 136 EQAGIDTPGNTPGSTKEPAIGWMTAFLFVTSFVGLLALVPIRKIMIIDYKLTYPSGTATA 195

Query: 64  HLINSFHTTEGARLAK 79
            LIN FHT +G  +AK
Sbjct: 196 VLINGFHTPKGDVMAK 211


>Medtr3g092090.1 | OPT family oligopeptide transporter | HC |
           chr3:42038377-42042233 | 20130731
          Length = 667

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/76 (47%), Positives = 42/76 (55%)

Query: 4   EIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATA 63
           E A   +  NT    K P +GWM A                RKIMI+D+KLTYPSGTATA
Sbjct: 136 EQAGIDTPGNTPGSTKEPAIGWMTAFLFVTSFVGLLALVPIRKIMIIDYKLTYPSGTATA 195

Query: 64  HLINSFHTTEGARLAK 79
            LIN FHT +G  +AK
Sbjct: 196 VLINGFHTPKGDVMAK 211


>Medtr1g007580.1 | OPT family oligopeptide transporter | HC |
           chr1:442182-437876 | 20130731
          Length = 673

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 5   IAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAH 64
           +   S+  NT  D K PG+GWM                  RK+MI+D KL YPSGTAT  
Sbjct: 142 VGGASTPGNTP-DTKEPGIGWMTGFLFVSYFVGLTALIPFRKMMIIDSKLPYPSGTATGV 200

Query: 65  LINSFHTTEGARLAK 79
           LIN FHT +G  +AK
Sbjct: 201 LINGFHTPKGNVMAK 215


>Medtr0312s0020.1 | OPT family oligopeptide transporter | HC |
           scaffold0312:1691-4889 | 20130731
          Length = 673

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 5   IAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAH 64
           +   S+  NT  D K  G+GWM                  RK+MI+D KL YPSGTAT  
Sbjct: 142 VGGASTPGNTP-DTKETGIGWMTGFLFVTYFVGLTALIPFRKMMIIDSKLPYPSGTATGV 200

Query: 65  LINSFHTTEGARLAK 79
           LIN FHT +G  +AK
Sbjct: 201 LINGFHTPKGNVMAK 215


>Medtr1g007540.1 | OPT family oligopeptide transporter | HC |
           chr1:428859-425661 | 20130731
          Length = 673

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 5   IAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAH 64
           +   S+  NT  D K  G+GWM                  RK+MI+D KL YPSGTAT  
Sbjct: 142 VGGASTPGNTP-DTKETGIGWMTGFLFVTYFVGLTALIPFRKMMIIDSKLPYPSGTATGV 200

Query: 65  LINSFHTTEGARLAK 79
           LIN FHT +G  +AK
Sbjct: 201 LINGFHTPKGNVMAK 215


>Medtr1g077840.1 | OPT family oligopeptide transporter | HC |
           chr1:34785116-34788483 | 20130731
          Length = 680

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 10  SEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINSF 69
           +E N    +K P  GWM                  RK++IVD  L YPSG ATA LIN F
Sbjct: 155 TEGNNPSAVKEPAFGWMSGFLFVVCFVGLFVLIPLRKVLIVDLNLPYPSGFATAVLINGF 214

Query: 70  HTTEGARLAK 79
           HT +  ++AK
Sbjct: 215 HTQDD-KMAK 223