Miyakogusa Predicted Gene

Lj0g3v0353039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0353039.1 Non Characterized Hit- tr|C5WXL4|C5WXL4_SORBI
Putative uncharacterized protein Sb01g033250
OS=Sorghu,52.27,0.000001,WW_DOMAIN_2,WW/Rsp5/WWP; no description,NULL;
OS03G0396900 PROTEIN,NULL; S-ADENOSYLMETHIONINE-DEPEND,CUFF.24297.1
         (510 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g019290.1 | RNA cap guanine-N2 methyltransferase | HC | ch...   469   e-132

>Medtr1g019290.1 | RNA cap guanine-N2 methyltransferase | HC |
           chr1:5798977-5791136 | 20130731
          Length = 701

 Score =  469 bits (1206), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/344 (67%), Positives = 263/344 (76%), Gaps = 4/344 (1%)

Query: 169 ELESLPTCSEGSGCDRIDGSNYCSEHGEWMVLWDTFYKRRYFYNVTTDSSTWDPPPGMEH 228
           E ESLP   EG  CDR+DGSN C   G+WMVLWDTFY RRYFYNV TD+STWDPPPGMEH
Sbjct: 268 ESESLPMSLEGVACDRVDGSNDCGVFGDWMVLWDTFYGRRYFYNVKTDTSTWDPPPGMEH 327

Query: 229 LAIGGSTESDDNEALKSAEDHGTQNNNEPPDETWIEENASGKPHEGYSAQTGVAAGNFVF 288
           LA GG TE DD+E LKS+E+  TQ++ + P+ET ++EN SG  HE YSA+ GVAAGN V 
Sbjct: 328 LAFGGCTELDDSETLKSSEECETQSSIKQPEETLVDENLSGNQHEEYSAEIGVAAGNLVS 387

Query: 289 EMATNNEDQSIDH-SDENFE-SSCNDGVSCCSVLNALDHIISSNGRYIQEEPEVDHTPME 346
           ++ATN+EDQ + H SDEN E +SCN GVS CSV N LDH++SSN +  Q   EVDHTP E
Sbjct: 388 DIATNSEDQFLHHPSDENLERTSCNGGVSRCSVSNTLDHVVSSNNKCSQATSEVDHTPTE 447

Query: 347 NMVIDISELDTESDPSTSXXXXXXXXXXXXXXXXLYNETEDLHFQNIPEAYSATIGKYWC 406
            MVID  ELD++SDP  S                LY ETEDL FQ +PEAYSATI KYWC
Sbjct: 448 YMVIDTLELDSKSDPFMSKQEKKVKRKHRRKK--LYYETEDLEFQKMPEAYSATIEKYWC 505

Query: 407 QRYILFSRFDDGVKMDEEGWFSVTPEAVARYQSIRCASSTIIDCFAGVGGNAIQFTQRCG 466
           QRYILFSRFDDGVKMDEEGWFSVTPE +A +Q+ RCA  T+IDCF G GGNAIQF QRC 
Sbjct: 506 QRYILFSRFDDGVKMDEEGWFSVTPEIIAHHQASRCAGGTLIDCFTGAGGNAIQFAQRCR 565

Query: 467 HVIAIDIDPLKIDYARHNASIYGVDDQIEFIIGDFFLLAPKLKV 510
           HV+AIDIDPLKIDYARHNA+IY VDDQI+FI GDFF+LAPKLK 
Sbjct: 566 HVVAIDIDPLKIDYARHNAAIYRVDDQIDFIAGDFFVLAPKLKA 609



 Score =  209 bits (531), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 110/179 (61%), Positives = 126/179 (70%), Gaps = 5/179 (2%)

Query: 1   MVIADSDYEGPAIEALGSLFKITQVFLWDDGLQLPLSTQQSKFTQEPHXXXXXXXXXXXX 60
           MVI DSDYEG AI++LGSLF +TQVFLWDDG Q+  S +  +     H            
Sbjct: 1   MVITDSDYEGAAIQSLGSLFNVTQVFLWDDGFQVQPSFEADQ--NNNHDSNPIPDWSQSE 58

Query: 61  XXILPEDLELNKEMNELGLPLSFQTTKQKCGTVKGKRKGARSKQQHPSHDPVAETLYEAN 120
             ILPEDLEL+K+MNELGLPLSFQ   +KCG VKGK+KGARSKQ     +PV ETL E +
Sbjct: 59  IIILPEDLELSKQMNELGLPLSFQAKNEKCGPVKGKKKGARSKQPRTCSNPVDETLKEVS 118

Query: 121 VEEVASLAEFHDKTNSSISCISILGQSESSYCDGAVEVDMTHCASGEGELESLPTCSEG 179
            EEV SLA+FHDKTNSS+SCIS+LGQSESSYCDGA EVDM    SGEG+     TCS G
Sbjct: 119 AEEVISLAKFHDKTNSSVSCISMLGQSESSYCDGAAEVDMAQSVSGEGDNS---TCSTG 174