Miyakogusa Predicted Gene

Lj0g3v0352849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0352849.1 CUFF.24281.1
         (124 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g058430.1 | E3 ubiquitin-protein ligase PRT1-like protein ...   103   3e-23
Medtr4g022320.2 | E3 ubiquitin-protein ligase PRT1-like protein,...   103   4e-23
Medtr4g022320.1 | E3 ubiquitin-protein ligase PRT1-like protein,...   102   6e-23

>Medtr7g058430.1 | E3 ubiquitin-protein ligase PRT1-like protein |
           HC | chr7:21035981-21029441 | 20130731
          Length = 410

 Score =  103 bits (257), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 44/60 (73%), Positives = 51/60 (85%)

Query: 1   MGVGCDFCGMYPITGDRYRCADCKEKIGFDLCSYCYKTRSKLPGRFNQQHTPEHKFQLVQ 60
            GVGCDFCG+ PI G+RY+C DCKEKIGFDLC  CY +RSKLPGRFNQQHT +H F+LV+
Sbjct: 298 FGVGCDFCGVLPIIGNRYKCNDCKEKIGFDLCGDCYDSRSKLPGRFNQQHTSDHSFKLVE 357


>Medtr4g022320.2 | E3 ubiquitin-protein ligase PRT1-like protein,
           putative | HC | chr4:7388297-7382620 | 20130731
          Length = 330

 Score =  103 bits (256), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 2/76 (2%)

Query: 2   GVGCDFCGMYPITGDRYRCADCKEKIGFDLCSYCYKTRSKLPGRFNQQHTPEHKFQLVQW 61
           GVGCDFCG+YPI GDRY+C DC+E IGFDLC  CY  RSK PGRFNQ+HT +H   LVQ+
Sbjct: 243 GVGCDFCGLYPIIGDRYKCVDCEESIGFDLCGDCYNKRSKRPGRFNQKHTLDHTLMLVQY 302

Query: 62  YGRVREQMNGQETSEL 77
             R      GQ++S+L
Sbjct: 303 --RRMLISRGQDSSDL 316


>Medtr4g022320.1 | E3 ubiquitin-protein ligase PRT1-like protein,
           putative | HC | chr4:7389370-7382599 | 20130731
          Length = 379

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 2/76 (2%)

Query: 2   GVGCDFCGMYPITGDRYRCADCKEKIGFDLCSYCYKTRSKLPGRFNQQHTPEHKFQLVQW 61
           GVGCDFCG+YPI GDRY+C DC+E IGFDLC  CY  RSK PGRFNQ+HT +H   LVQ+
Sbjct: 292 GVGCDFCGLYPIIGDRYKCVDCEESIGFDLCGDCYNKRSKRPGRFNQKHTLDHTLMLVQY 351

Query: 62  YGRVREQMNGQETSEL 77
             R      GQ++S+L
Sbjct: 352 --RRMLISRGQDSSDL 365