Miyakogusa Predicted Gene

Lj0g3v0352829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0352829.1 Non Characterized Hit- tr|G7JGJ8|G7JGJ8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,33.12,5e-18,coiled-coil,NULL;
seg,NULL,NODE_87623_length_1141_cov_9.510078.path2.1
         (310 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain ...    51   2e-06
Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731          50   2e-06
Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain ...    50   2e-06

>Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain
           protein | LC | chr8:5709180-5705508 | 20130731
          Length = 694

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 3/129 (2%)

Query: 82  RLRLRDLK-KLPTGKKVVIEWNEEGQPVGEAFGLFLNYIYDLASNANKFPVNYDNWSAVP 140
           R R+++LK K   G+K+ IE+   G P GE    F   +   A       ++  +W++VP
Sbjct: 24  RTRMKNLKMKTAHGEKLPIEFQSNGLPSGENAKRFKLQVASFARECTSILIS--DWNSVP 81

Query: 141 STYKDRVWNDIIAVKFQVNDEEHKKWILSNMGEKWEENRSWLYHEYYDPSLDLEENIHWG 200
              KD +W  I A     ND+  KK  +S  GE+W+  +  L   Y     +++++    
Sbjct: 82  DATKDEIWKSITAKWDMPNDKIVKKKTISYAGERWKAFKYSLTSRYLFDGENIDKSPMET 141

Query: 201 PDSIPKDQW 209
            D I +D W
Sbjct: 142 YDFIDEDIW 150


>Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731
          Length = 681

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 3/129 (2%)

Query: 82  RLRLRDLK-KLPTGKKVVIEWNEEGQPVGEAFGLFLNYIYDLASNANKFPVNYDNWSAVP 140
           R R+++LK K   G+K+ IE+   G P GE    F   +   A       ++  +W++VP
Sbjct: 24  RTRMKNLKMKTAHGEKLPIEFQSNGLPSGENAKRFKLQVASFARECTSILIS--DWNSVP 81

Query: 141 STYKDRVWNDIIAVKFQVNDEEHKKWILSNMGEKWEENRSWLYHEYYDPSLDLEENIHWG 200
              KD +W  I A     ND+  KK  +S  GE+W+  +  L   Y     +++++    
Sbjct: 82  DATKDEIWKSITAKWDMPNDKIVKKKTISYAGERWKAFKYSLTSRYLFDGENIDKSPMET 141

Query: 201 PDSIPKDQW 209
            D I +D W
Sbjct: 142 YDFIDEDIW 150


>Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain
           protein | LC | chr2:16185805-16182137 | 20130731
          Length = 694

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 3/129 (2%)

Query: 82  RLRLRDLK-KLPTGKKVVIEWNEEGQPVGEAFGLFLNYIYDLASNANKFPVNYDNWSAVP 140
           R R+++LK K   G+K+ IE+   G P GE    F   +   A       ++  +W++VP
Sbjct: 24  RTRMKNLKMKTAHGEKLPIEFQSNGLPSGENAKRFKLQVASFARECTSILIS--DWNSVP 81

Query: 141 STYKDRVWNDIIAVKFQVNDEEHKKWILSNMGEKWEENRSWLYHEYYDPSLDLEENIHWG 200
              KD +W  I A     ND+  KK  +S  GE+W+  +  L   Y     +++++    
Sbjct: 82  DATKDEIWKSITAKWDMPNDKIVKKKTISYAGERWKAFKYSLTSRYLFDGENIDKSPMET 141

Query: 201 PDSIPKDQW 209
            D I +D W
Sbjct: 142 YDFIDEDIW 150