Miyakogusa Predicted Gene

Lj0g3v0352709.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0352709.1 Non Characterized Hit- tr|I1KSY7|I1KSY7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,82.52,0,DUF3550,Protein of unknown function DUF3550/UPF0682;
seg,NULL; UNKNOWN PROTEIN,NULL; FAMILY NOT NAME,CUFF.24282.1
         (350 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g089935.1 | signal transducer, putative | HC | chr8:375709...   577   e-165
Medtr8g009950.1 | signal transducer, putative | HC | chr8:248406...   294   8e-80

>Medtr8g089935.1 | signal transducer, putative | HC |
           chr8:37570969-37576081 | 20130731
          Length = 592

 Score =  577 bits (1486), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 281/345 (81%), Positives = 296/345 (85%), Gaps = 9/345 (2%)

Query: 1   MRTSDSRFLVEAYVFYEAILSRRYFEGSEASAKDLVVRSKELRFYARFLLVSLILNRAEM 60
           MR S++RFLVEAYVFYEAILSRRYFEGSE+  KDL VRSKELRFYARFLLVSLILNR EM
Sbjct: 88  MRASETRFLVEAYVFYEAILSRRYFEGSES--KDLGVRSKELRFYARFLLVSLILNRVEM 145

Query: 61  VNHLRDRFVALVDDCKSNFRETNFKEWKQVVQEIVRFTKVDKGFGLRPLRYCATFDSHKA 120
           V HL DRFVALVDDCKS FR+TNFKEWK VVQEIVRFTK DKGF +RP+RYCATFDSH+A
Sbjct: 146 VKHLMDRFVALVDDCKSTFRDTNFKEWKLVVQEIVRFTKADKGFSIRPMRYCATFDSHQA 205

Query: 121 SFPYVARFHAKRVLKFHDALLTSYHRNEVKFAELTLDIYRMIQCLEWEPSGSFYQKHTAK 180
           S PYVARFHAKRVLKFHDALL SYHRNEVKFAELTLD+YRM+QCLEWEPSGSFYQK   +
Sbjct: 206 SLPYVARFHAKRVLKFHDALLASYHRNEVKFAELTLDVYRMLQCLEWEPSGSFYQKRIVR 265

Query: 181 PHENGDSIDHSATSAIIDMNLAADMTDPTIPPNPRKATLYRPSVTHVIAVMATICEELPP 240
           P ENGD IDHS  S IIDMNLAADM DP IP NP KATLYRPSVTHVIAVMATICEELPP
Sbjct: 266 PKENGDVIDHSGASGIIDMNLAADMIDPNIPSNPTKATLYRPSVTHVIAVMATICEELPP 325

Query: 241 DSVVLVYLSASGKAGLNNVXXXXXXXXXXXXRHKVFSQSSQQMNSGTTESQNNGQREMIC 300
           DSVVLVYLSA GKAG+NN             RHKV SQSS ++NSG +E QNNG+RE  C
Sbjct: 326 DSVVLVYLSAPGKAGVNN------GGSSKYSRHKVLSQSSDELNSGMSEFQNNGKRESSC 379

Query: 301 H-DSCLWFGPKGNSGLNNLYPGDLIPFTRKPLFLIIDSDNSHAFK 344
           H D  LWFGPKGNSG NNLYPGDLIPFTRKPLFLIIDSDNSHAFK
Sbjct: 380 HQDDFLWFGPKGNSGSNNLYPGDLIPFTRKPLFLIIDSDNSHAFK 424


>Medtr8g009950.1 | signal transducer, putative | HC |
           chr8:2484063-2477792 | 20130731
          Length = 571

 Score =  294 bits (753), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 162/346 (46%), Positives = 212/346 (61%), Gaps = 49/346 (14%)

Query: 1   MRTSDSRFLVEAYVFYEAILSRRYFEGSEASAKDLVVRSKELRFYARFLLVSLILNRAEM 60
           M+TSD  +L E+Y+FYEAI +R YF   E    D+ + +K+LRF ARFL V L+LNR EM
Sbjct: 95  MKTSDYNYLSESYIFYEAIFTRDYFR--EGLFSDVNIANKQLRFLARFLTVCLLLNRREM 152

Query: 61  VNHLRDRFVALVDDCKSNFRETNFKEWKQVVQEIVRFTKVDKGF-GLRPLRYCATFDSHK 119
           +  L ++   LVD+CK  F +++FKEWK VV EI RF KVD GF  +RP+RY    DSH 
Sbjct: 153 LQQLVNQLKVLVDECKRVFVDSDFKEWKVVVVEIGRFLKVDTGFMNVRPVRYSLVLDSHP 212

Query: 120 ASFPYVARFHAKRVLKFHDALLTSYHRNEVKFAELTLDIYRMIQCLEWEPSGSFYQKHTA 179
            + P V     KR LK  DA+L+S+H NEVKF+E T+D +RM+QCLEW+PSGSFYQ   +
Sbjct: 213 DTLPRVPVAITKRNLKLRDAMLSSFHYNEVKFSEFTIDTFRMLQCLEWDPSGSFYQSGGS 272

Query: 180 KPHENGDSIDHSATSAIIDMNLAADMTDPTIPPNPRKATLYRPSVTHVIAVMATICEELP 239
           K  +NG     + T  I   +   D+ DPT+P NPRKA LYRPS+TH IAV+ATICEELP
Sbjct: 273 KLSQNG----ATGTGRI---SYIQDIADPTLPANPRKAILYRPSLTHFIAVLATICEELP 325

Query: 240 PDSVVLVYLSASGKAGLNNVXXXXXXXXXXXXRHKVFSQSSQQMNSGTTESQNNGQREMI 299
            D ++LVYLSASG                                  ++ + NN      
Sbjct: 326 LDGILLVYLSASGAG--------------------------------SSGAGNN------ 347

Query: 300 CHDSCLWFGPKGNSGLNNLYPGDLIPFTRKPLFLIIDSDNSHAFKA 345
               C+  G +G+ G N++YP D +PFTR+PL LIID++NS AFK 
Sbjct: 348 -ESGCINLGSRGDRGSNSIYPSDFLPFTRRPLLLIIDNENSKAFKV 392