Miyakogusa Predicted Gene

Lj0g3v0352549.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0352549.1 Non Characterized Hit- tr|B9RHT7|B9RHT7_RICCO
Putative uncharacterized protein OS=Ricinus communis G,56.76,7e-16,
,CUFF.24250.1
         (102 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g089655.1 | ribosomal-like protein, putative | HC | chr8:3...   131   1e-31
Medtr8g089655.2 | ribosomal-like protein, putative | HC | chr8:3...   131   1e-31

>Medtr8g089655.1 | ribosomal-like protein, putative | HC |
          chr8:37307374-37307805 | 20130731
          Length = 143

 Score =  131 bits (330), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 82/99 (82%)

Query: 1  MDQLPASNLPSKLGIKANPSIKKRLSSPRELISHYESQGMETEEASLKVIEDLQKALFGV 60
          M+Q    N+PS   IK  P+ KK++ SP+ELIS+YESQGM+++EASLKVIEDLQKALFGV
Sbjct: 1  MEQSSKPNVPSIPEIKMKPNPKKKIPSPKELISYYESQGMDSQEASLKVIEDLQKALFGV 60

Query: 61 IFSGRGKKDKLLTDSSTKMDAVNNRLNILDMKLDSKPVY 99
          I SG+GKKD+L+ +SS KMD+VN RL ILDMKLD+KP +
Sbjct: 61 ISSGKGKKDRLMNESSRKMDSVNQRLAILDMKLDTKPGF 99


>Medtr8g089655.2 | ribosomal-like protein, putative | HC |
           chr8:37306842-37307805 | 20130731
          Length = 146

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 82/100 (82%)

Query: 1   MDQLPASNLPSKLGIKANPSIKKRLSSPRELISHYESQGMETEEASLKVIEDLQKALFGV 60
           M+Q    N+PS   IK  P+ KK++ SP+ELIS+YESQGM+++EASLKVIEDLQKALFGV
Sbjct: 4   MEQSSKPNVPSIPEIKMKPNPKKKIPSPKELISYYESQGMDSQEASLKVIEDLQKALFGV 63

Query: 61  IFSGRGKKDKLLTDSSTKMDAVNNRLNILDMKLDSKPVYA 100
           I SG+GKKD+L+ +SS KMD+VN RL ILDMKLD+KP + 
Sbjct: 64  ISSGKGKKDRLMNESSRKMDSVNQRLAILDMKLDTKPGFV 103