Miyakogusa Predicted Gene

Lj0g3v0352109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0352109.1 tr|C7J0T0|C7J0T0_ORYSJ Os04g0376600 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os04g03766,57.3,3e-19,seg,NULL,CUFF.24566.1
         (185 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g013095.1 | X-ray induced transcript protein | HC | chr8:4...   253   8e-68
Medtr7g056400.1 | X-ray induced transcript protein, putative | H...   224   3e-59
Medtr3g064750.1 | hypothetical protein | HC | chr3:29187042-2919...    55   5e-08

>Medtr8g013095.1 | X-ray induced transcript protein | HC |
           chr8:4114305-4118631 | 20130731
          Length = 307

 Score =  253 bits (645), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 138/185 (74%), Positives = 154/185 (83%), Gaps = 6/185 (3%)

Query: 1   MKDIFPEVSPWVXXXXXXXXXXXXYDDLESTEGWLAEYFNDTDMQLSPDDLNFTGADDVH 60
           +K+IFPEVS W+              DLE+TE WLAEY NDT+MQ SPDDLNF+GADDVH
Sbjct: 129 IKEIFPEVSQWMSGAPEYTLENVP--DLEATEEWLAEYLNDTEMQFSPDDLNFSGADDVH 186

Query: 61  IDIAELSDIPPSQEQHMVQKRVTVTRTPKNIIFKGRKSFIRTPTKLASTVAYPFAFIKPS 120
           ID+AEL +I PS +Q++V +   VTRTPKNI+FKGRKSFIRTPTKLASTVAYPF FIKPS
Sbjct: 187 IDVAELCNITPSHQQNVVPQ--PVTRTPKNIVFKGRKSFIRTPTKLASTVAYPFTFIKPS 244

Query: 121 GAHGDVTLKEINQRIRTPPPSKSKQNSEDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITI 180
           GA GD+TLKEINQRIRT  PSKS Q+S+D SAYPKSAFSGKPVVGKTKIRTEGGKGSITI
Sbjct: 245 GAQGDITLKEINQRIRT--PSKSAQSSDDSSAYPKSAFSGKPVVGKTKIRTEGGKGSITI 302

Query: 181 MRTKG 185
           MRTKG
Sbjct: 303 MRTKG 307


>Medtr7g056400.1 | X-ray induced transcript protein, putative | HC |
           chr7:19897039-19902058 | 20130731
          Length = 306

 Score =  224 bits (572), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 114/185 (61%), Positives = 141/185 (76%), Gaps = 7/185 (3%)

Query: 2   KDIFPEVSPWVXXXXXXXXXXXXYDDLESTEGWLAEYFNDTDMQ-LSPDDLNFTGADDVH 60
           +DIFPEVS W+            Y+DLES E WLA+   DT++Q L PD+ NF+GADDVH
Sbjct: 128 EDIFPEVSQWLSEDSENASSSN-YEDLESAEKWLADCLKDTEIQQLYPDNPNFSGADDVH 186

Query: 61  IDIAELSDIPPSQEQHMVQKRVTVTRTPKNIIFKGRKSFIRTPTKLASTVAYPFAFIKPS 120
           ID  E+ ++ P  EQ++ Q  + ++ TP+ I+FKGRKS ++TPT L+S+VAYPFAF+KP 
Sbjct: 187 IDATEICNLTPPFEQNVAQ--LQISSTPRKIVFKGRKSIMKTPTGLSSSVAYPFAFVKPC 244

Query: 121 GAHGDVTLKEINQRIRTPPPSKSKQNSEDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITI 180
           G  GDVTLKEIN+RI++PPPSKSKQ  ED   YPKSAFSGKPVVGKTKI TEGGKGSITI
Sbjct: 245 GDRGDVTLKEINKRIQSPPPSKSKQIKED---YPKSAFSGKPVVGKTKILTEGGKGSITI 301

Query: 181 MRTKG 185
           MRT+G
Sbjct: 302 MRTRG 306


>Medtr3g064750.1 | hypothetical protein | HC |
           chr3:29187042-29191148 | 20130731
          Length = 274

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 8/83 (9%)

Query: 110 VAYPFAFIKPSGAHGDVTLKEINQRIRTPP--PSKSKQNSEDPSAYPK-----SAFSGKP 162
           +AYPF  +KP G  G+ T+K+IN ++   P  P       ED   +          SGK 
Sbjct: 193 IAYPFELVKPGGVEGETTIKDINHQMMMSPSKPIPHPVAVEDYGTHSCISNRGYGISGKE 252

Query: 163 VVGKTKIRTEGGKGSITIMRTKG 185
           V   T+I+T  G+GSITI+RTKG
Sbjct: 253 VAALTRIQTR-GRGSITIIRTKG 274