Miyakogusa Predicted Gene
- Lj0g3v0350949.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0350949.1 tr|A9TVB0|A9TVB0_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,38.59,1e-18,URIDINKINASE,Uridine kinase; no
description,NULL; seg,NULL; P-loop containing nucleoside
triphosphat,CUFF.24116.1
(211 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g073890.1 | phosphoribulokinase/uridine kinase-like protei... 335 2e-92
Medtr4g073890.2 | phosphoribulokinase/uridine kinase-like protei... 334 4e-92
Medtr8g069865.1 | phosphoribulokinase/uridine kinase-like protei... 333 7e-92
Medtr4g112790.1 | phosphoribulokinase/uridine kinase-like protei... 328 3e-90
Medtr4g112790.3 | phosphoribulokinase/uridine kinase-like protei... 325 2e-89
Medtr4g112790.2 | phosphoribulokinase/uridine kinase-like protei... 152 3e-37
Medtr4g084660.4 | P-loop nucleoside triphosphate hydrolase super... 121 6e-28
Medtr4g084660.2 | P-loop nucleoside triphosphate hydrolase super... 121 6e-28
Medtr4g084660.1 | P-loop nucleoside triphosphate hydrolase super... 120 7e-28
Medtr4g084660.3 | P-loop nucleoside triphosphate hydrolase super... 120 7e-28
Medtr4g103620.1 | uridine kinase/uracil phosphoribosyltransferas... 73 2e-13
Medtr3g061030.1 | phosphoribulokinase/uridine kinase | HC | chr3... 61 8e-10
Medtr3g061030.4 | phosphoribulokinase/uridine kinase | HC | chr3... 61 8e-10
Medtr3g061030.6 | phosphoribulokinase/uridine kinase | HC | chr3... 61 8e-10
Medtr3g061030.3 | phosphoribulokinase/uridine kinase | HC | chr3... 61 8e-10
Medtr3g061030.5 | phosphoribulokinase/uridine kinase | HC | chr3... 61 8e-10
Medtr5g096660.1 | phosphoribulokinase/uridine kinase | HC | chr5... 60 2e-09
Medtr7g029450.1 | phosphoribulokinase/uridine kinase | HC | chr7... 59 4e-09
Medtr3g061030.2 | phosphoribulokinase/uridine kinase | HC | chr3... 52 3e-07
>Medtr4g073890.1 | phosphoribulokinase/uridine kinase-like protein |
HC | chr4:28071140-28080133 | 20130731
Length = 687
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/214 (77%), Positives = 184/214 (85%), Gaps = 3/214 (1%)
Query: 1 MAQDNSGADCC---LGLIRDQVRLVKRKHSDRYEVAPIHDQLSFEKGYFVVFHACQLLVQ 57
MA + S +D LGL++DQV LVKRK S+RY ++ I DQLSFEKG+F+V ACQLL Q
Sbjct: 25 MANNTSNSDSHHKRLGLLKDQVHLVKRKDSNRYVISSIQDQLSFEKGFFIVIRACQLLAQ 84
Query: 58 KNDGIILVGVAGPSGAGKTAFTEKILNILPGIAVISMDNYNDSSQIVDGNFDDPRVTDYE 117
KNDGIILVGVAGPSGAGKT FTEKILN +P IAVISMDNYND+S+IVDGNFDDPR+TDY+
Sbjct: 85 KNDGIILVGVAGPSGAGKTIFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYD 144
Query: 118 TLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSEKXXXXXXXX 177
TLL+N++DLKEGK VQVPIYDFKSSSR GYRTV+ PSSRIVIIEGIYALSEK
Sbjct: 145 TLLQNLQDLKEGKTVQVPIYDFKSSSRVGYRTVEAPSSRIVIIEGIYALSEKLRTLLDLR 204
Query: 178 VSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
VSVTGGVHLDLVKRVIRDIQRAGQEPEEII+QIS
Sbjct: 205 VSVTGGVHLDLVKRVIRDIQRAGQEPEEIIYQIS 238
>Medtr4g073890.2 | phosphoribulokinase/uridine kinase-like protein |
HC | chr4:28071167-28077256 | 20130731
Length = 483
Score = 334 bits (856), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 165/214 (77%), Positives = 184/214 (85%), Gaps = 3/214 (1%)
Query: 1 MAQDNSGADCC---LGLIRDQVRLVKRKHSDRYEVAPIHDQLSFEKGYFVVFHACQLLVQ 57
MA + S +D LGL++DQV LVKRK S+RY ++ I DQLSFEKG+F+V ACQLL Q
Sbjct: 25 MANNTSNSDSHHKRLGLLKDQVHLVKRKDSNRYVISSIQDQLSFEKGFFIVIRACQLLAQ 84
Query: 58 KNDGIILVGVAGPSGAGKTAFTEKILNILPGIAVISMDNYNDSSQIVDGNFDDPRVTDYE 117
KNDGIILVGVAGPSGAGKT FTEKILN +P IAVISMDNYND+S+IVDGNFDDPR+TDY+
Sbjct: 85 KNDGIILVGVAGPSGAGKTIFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYD 144
Query: 118 TLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSEKXXXXXXXX 177
TLL+N++DLKEGK VQVPIYDFKSSSR GYRTV+ PSSRIVIIEGIYALSEK
Sbjct: 145 TLLQNLQDLKEGKTVQVPIYDFKSSSRVGYRTVEAPSSRIVIIEGIYALSEKLRTLLDLR 204
Query: 178 VSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
VSVTGGVHLDLVKRVIRDIQRAGQEPEEII+QIS
Sbjct: 205 VSVTGGVHLDLVKRVIRDIQRAGQEPEEIIYQIS 238
>Medtr8g069865.1 | phosphoribulokinase/uridine kinase-like protein |
HC | chr8:29534777-29540337 | 20130731
Length = 654
Score = 333 bits (854), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 163/214 (76%), Positives = 183/214 (85%), Gaps = 3/214 (1%)
Query: 1 MAQDNSGADC---CLGLIRDQVRLVKRKHSDRYEVAPIHDQLSFEKGYFVVFHACQLLVQ 57
MAQD G D LG ++DQVRLVKRK +RYEV+PI ++LSFE G+ +VFHA QLLVQ
Sbjct: 1 MAQDTIGVDSQQKHLGRLKDQVRLVKRKDCERYEVSPIQNKLSFENGFSIVFHAFQLLVQ 60
Query: 58 KNDGIILVGVAGPSGAGKTAFTEKILNILPGIAVISMDNYNDSSQIVDGNFDDPRVTDYE 117
KNDG+IL+GV GPSGAGKT F EKI N +P IAVISMDNYNDSS+IVDGNFDDPR+TDYE
Sbjct: 61 KNDGMILIGVGGPSGAGKTVFAEKIFNSMPDIAVISMDNYNDSSRIVDGNFDDPRLTDYE 120
Query: 118 TLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSEKXXXXXXXX 177
TLLRN+ DLK GKPVQVP+YD+KSSSRTGYRTV+VPSSRIVIIEGIYALSE+
Sbjct: 121 TLLRNVHDLKAGKPVQVPVYDYKSSSRTGYRTVEVPSSRIVIIEGIYALSERLRPLLDLR 180
Query: 178 VSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
VSVTGGVHLDL+KRVIRDIQRAGQEP+EIIHQIS
Sbjct: 181 VSVTGGVHLDLIKRVIRDIQRAGQEPQEIIHQIS 214
>Medtr4g112790.1 | phosphoribulokinase/uridine kinase-like protein |
HC | chr4:45926728-45932742 | 20130731
Length = 665
Score = 328 bits (840), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 184/219 (84%), Gaps = 8/219 (3%)
Query: 1 MAQD----NSGADCCL---GLIRDQVRLVKRKH-SDRYEVAPIHDQLSFEKGYFVVFHAC 52
MAQD +SGA+ GL+RDQV++VKRK SDRYE+ PI D LSFEKG+F+V AC
Sbjct: 1 MAQDTVIVSSGAESPQRRQGLLRDQVQIVKRKDGSDRYEIVPIQDSLSFEKGFFIVIRAC 60
Query: 53 QLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILPGIAVISMDNYNDSSQIVDGNFDDPR 112
QLL Q NDGIILVGVAGPSGAGKT FT+K+ + +P IAVI+MDNYNDSS+I+DGNFDDPR
Sbjct: 61 QLLAQNNDGIILVGVAGPSGAGKTVFTDKVFSFMPSIAVITMDNYNDSSRIIDGNFDDPR 120
Query: 113 VTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSEKXXX 172
+TDY+TLL+NI+DLK GKP QVPIYDFKSSSR GYRT++VPSSRIVIIEGIYALSEK
Sbjct: 121 LTDYDTLLKNIQDLKSGKPAQVPIYDFKSSSRIGYRTIEVPSSRIVIIEGIYALSEKLRP 180
Query: 173 XXXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
VSVTGGVH DLVKRV+RDIQRAGQEPEEIIHQIS
Sbjct: 181 LLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQIS 219
>Medtr4g112790.3 | phosphoribulokinase/uridine kinase-like protein |
HC | chr4:45926728-45932742 | 20130731
Length = 522
Score = 325 bits (834), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 184/219 (84%), Gaps = 8/219 (3%)
Query: 1 MAQD----NSGADCCL---GLIRDQVRLVKRKH-SDRYEVAPIHDQLSFEKGYFVVFHAC 52
MAQD +SGA+ GL+RDQV++VKRK SDRYE+ PI D LSFEKG+F+V AC
Sbjct: 1 MAQDTVIVSSGAESPQRRQGLLRDQVQIVKRKDGSDRYEIVPIQDSLSFEKGFFIVIRAC 60
Query: 53 QLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILPGIAVISMDNYNDSSQIVDGNFDDPR 112
QLL Q NDGIILVGVAGPSGAGKT FT+K+ + +P IAVI+MDNYNDSS+I+DGNFDDPR
Sbjct: 61 QLLAQNNDGIILVGVAGPSGAGKTVFTDKVFSFMPSIAVITMDNYNDSSRIIDGNFDDPR 120
Query: 113 VTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSEKXXX 172
+TDY+TLL+NI+DLK GKP QVPIYDFKSSSR GYRT++VPSSRIVIIEGIYALSEK
Sbjct: 121 LTDYDTLLKNIQDLKSGKPAQVPIYDFKSSSRIGYRTIEVPSSRIVIIEGIYALSEKLRP 180
Query: 173 XXXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
VSVTGGVH DLVKRV+RDIQRAGQEPEEIIHQIS
Sbjct: 181 LLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQIS 219
>Medtr4g112790.2 | phosphoribulokinase/uridine kinase-like protein |
HC | chr4:45926728-45932742 | 20130731
Length = 545
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 80/95 (84%)
Query: 117 ETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSEKXXXXXXX 176
E+L+ + DLK GKP QVPIYDFKSSSR GYRT++VPSSRIVIIEGIYALSEK
Sbjct: 5 ESLMETLMDLKSGKPAQVPIYDFKSSSRIGYRTIEVPSSRIVIIEGIYALSEKLRPLLDL 64
Query: 177 XVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
VSVTGGVH DLVKRV+RDIQRAGQEPEEIIHQIS
Sbjct: 65 RVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQIS 99
>Medtr4g084660.4 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr4:32997024-32984376 |
20130731
Length = 682
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 38 QLSFEKGYFVVFHACQLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILPGIAVISMDNY 97
+SF+ GY+++ + Q L +K DG++ VG+ GPSG+GKT+ TEK+ ++ G VISM+NY
Sbjct: 36 HVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVF-GCTVISMENY 94
Query: 98 NDSSQIVDGNFDDPRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRI 157
D + +GN D D+ TL++N+ DL +G +P +D++ R GY+ + SS +
Sbjct: 95 CDG--VDEGNVLDS--IDFGTLIKNLEDLTKGDDTLIPEFDYQQKRRVGYKKITSASSGV 150
Query: 158 VIIEGIYALSEKXXXXXXXXVSVTGGVHLDLVKRVIRDI 196
VI++G YAL K V+V GGVH L+ +V DI
Sbjct: 151 VIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDI 189
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 4/174 (2%)
Query: 28 DRYEVAPIHDQLSFEKGYFVVFHACQLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILP 87
D +AP+ D ++G + A Q L++ ++VG+ GPSG GKT+ K+ NI+
Sbjct: 481 DTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANII- 539
Query: 88 GIAVISMDNYNDSSQIVDGNFDDPRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGY 147
G ++S+++Y + D +DD D L +NI D++ G+ +VPI+D +S +R+G+
Sbjct: 540 GCEIVSLESYYKQGK--DFKYDDFNSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGF 597
Query: 148 RTVDVPS-SRIVIIEGIYALSEKXXXXXXXXVSVTGGVHLDLVKRVIRDIQRAG 200
+ ++V ++I EG+YAL ++V GGVH L+ RV RD R G
Sbjct: 598 KELEVSEDCGVIIFEGVYALHPDIRMSLDLWIAVVGGVHSHLISRVQRDKSRVG 651
>Medtr4g084660.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr4:32997024-32980105 |
20130731
Length = 950
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 38 QLSFEKGYFVVFHACQLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILPGIAVISMDNY 97
+SF+ GY+++ + Q L +K DG++ VG+ GPSG+GKT+ TEK+ ++ G VISM+NY
Sbjct: 36 HVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVF-GCTVISMENY 94
Query: 98 NDSSQIVDGNFDDPRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRI 157
D + +GN D D+ TL++N+ DL +G +P +D++ R GY+ + SS +
Sbjct: 95 CDG--VDEGNVLDS--IDFGTLIKNLEDLTKGDDTLIPEFDYQQKRRVGYKKITSASSGV 150
Query: 158 VIIEGIYALSEKXXXXXXXXVSVTGGVHLDLVKRVIRDI 196
VI++G YAL K V+V GGVH L+ +V DI
Sbjct: 151 VIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDI 189
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 4/174 (2%)
Query: 28 DRYEVAPIHDQLSFEKGYFVVFHACQLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILP 87
D +AP+ D ++G + A Q L++ ++VG+ GPSG GKT+ K+ NI+
Sbjct: 481 DTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANII- 539
Query: 88 GIAVISMDNYNDSSQIVDGNFDDPRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGY 147
G ++S+++Y + D +DD D L +NI D++ G+ +VPI+D +S +R+G+
Sbjct: 540 GCEIVSLESYYKQGK--DFKYDDFNSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGF 597
Query: 148 RTVDVPS-SRIVIIEGIYALSEKXXXXXXXXVSVTGGVHLDLVKRVIRDIQRAG 200
+ ++V ++I EG+YAL ++V GGVH L+ RV RD R G
Sbjct: 598 KELEVSEDCGVIIFEGVYALHPDIRMSLDLWIAVVGGVHSHLISRVQRDKSRVG 651
>Medtr4g084660.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr4:32996815-32980368 |
20130731
Length = 979
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 38 QLSFEKGYFVVFHACQLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILPGIAVISMDNY 97
+SF+ GY+++ + Q L +K DG++ VG+ GPSG+GKT+ TEK+ ++ G VISM+NY
Sbjct: 36 HVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVF-GCTVISMENY 94
Query: 98 NDSSQIVDGNFDDPRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRI 157
D + +GN D D+ TL++N+ DL +G +P +D++ R GY+ + SS +
Sbjct: 95 CDG--VDEGNVLDS--IDFGTLIKNLEDLTKGDDTLIPEFDYQQKRRVGYKKITSASSGV 150
Query: 158 VIIEGIYALSEKXXXXXXXXVSVTGGVHLDLVKRVIRDI 196
VI++G YAL K V+V GGVH L+ +V DI
Sbjct: 151 VIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDI 189
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 4/174 (2%)
Query: 28 DRYEVAPIHDQLSFEKGYFVVFHACQLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILP 87
D +AP+ D ++G + A Q L++ ++VG+ GPSG GKT+ K+ NI+
Sbjct: 481 DTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANII- 539
Query: 88 GIAVISMDNYNDSSQIVDGNFDDPRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGY 147
G ++S+++Y + D +DD D L +NI D++ G+ +VPI+D +S +R+G+
Sbjct: 540 GCEIVSLESYYKQGK--DFKYDDFNSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGF 597
Query: 148 RTVDVPS-SRIVIIEGIYALSEKXXXXXXXXVSVTGGVHLDLVKRVIRDIQRAG 200
+ ++V ++I EG+YAL ++V GGVH L+ RV RD R G
Sbjct: 598 KELEVSEDCGVIIFEGVYALHPDIRMSLDLWIAVVGGVHSHLISRVQRDKSRVG 651
>Medtr4g084660.3 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr4:32997024-32983724 |
20130731
Length = 792
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 38 QLSFEKGYFVVFHACQLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILPGIAVISMDNY 97
+SF+ GY+++ + Q L +K DG++ VG+ GPSG+GKT+ TEK+ ++ G VISM+NY
Sbjct: 36 HVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVF-GCTVISMENY 94
Query: 98 NDSSQIVDGNFDDPRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRI 157
D + +GN D D+ TL++N+ DL +G +P +D++ R GY+ + SS +
Sbjct: 95 CDG--VDEGNVLDS--IDFGTLIKNLEDLTKGDDTLIPEFDYQQKRRVGYKKITSASSGV 150
Query: 158 VIIEGIYALSEKXXXXXXXXVSVTGGVHLDLVKRVIRDI 196
VI++G YAL K V+V GGVH L+ +V DI
Sbjct: 151 VIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDI 189
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 4/174 (2%)
Query: 28 DRYEVAPIHDQLSFEKGYFVVFHACQLLVQKNDGIILVGVAGPSGAGKTAFTEKILNILP 87
D +AP+ D ++G + A Q L++ ++VG+ GPSG GKT+ K+ NI+
Sbjct: 481 DTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANII- 539
Query: 88 GIAVISMDNYNDSSQIVDGNFDDPRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGY 147
G ++S+++Y + D +DD D L +NI D++ G+ +VPI+D +S +R+G+
Sbjct: 540 GCEIVSLESYYKQGK--DFKYDDFNSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGF 597
Query: 148 RTVDVPS-SRIVIIEGIYALSEKXXXXXXXXVSVTGGVHLDLVKRVIRDIQRAG 200
+ ++V ++I EG+YAL ++V GGVH L+ RV RD R G
Sbjct: 598 KELEVSEDCGVIIFEGVYALHPDIRMSLDLWIAVVGGVHSHLISRVQRDKSRVG 651
>Medtr4g103620.1 | uridine kinase/uracil phosphoribosyltransferase |
HC | chr4:42838130-42832631 | 20130731
Length = 454
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 9/162 (5%)
Query: 59 NDGIILVGVAGPSGAGKTAFTEKILNILPG--IAVISMDNY------NDSSQIVDGNFDD 110
++ + L+GV+G + +GKT + I+ L + +++ D++ ++S ++ + NFD
Sbjct: 30 HNNVFLIGVSGGTASGKTTVCDMIIQQLQDHRVVLVNQDSFYRGLTNDESKRVHEYNFDH 89
Query: 111 PRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSE-K 169
P D E L+ + LK G+ VQVP+YDFK R R V +S ++I+EGI E +
Sbjct: 90 PDAFDTEQLVETLIKLKSGQSVQVPVYDFKLHQRASDRYRQVNASEVIILEGILVFHEPR 149
Query: 170 XXXXXXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
+ V + L +R+ RD G++ ++ Q +
Sbjct: 150 VRDMMNMKIFVDADPDVRLGRRIRRDTVERGRDVHSVLEQYA 191
>Medtr3g061030.1 | phosphoribulokinase/uridine kinase | HC |
chr3:24230201-24237140 | 20130731
Length = 476
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 63 ILVGVAGPSGAGKTAFTEKILNILPG--IAVISMDNY------NDSSQIVDGNFDDPRVT 114
++GVAG + +GK + I+ L + +++ D++ + +++ D NFD P
Sbjct: 49 FVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPDAF 108
Query: 115 DYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSE-KXXXX 173
D E LLR + LK G+ V +P YDFKS R V+ S ++I+EGI + +
Sbjct: 109 DTEELLRVMDKLKHGEAVDIPKYDFKSYKSDALRRVN--PSDVIILEGILVFHDPRVREL 166
Query: 174 XXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
+ V + L +R+ RD ++ I+ Q S
Sbjct: 167 MNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYS 204
>Medtr3g061030.4 | phosphoribulokinase/uridine kinase | HC |
chr3:24230201-24237140 | 20130731
Length = 476
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 63 ILVGVAGPSGAGKTAFTEKILNILPG--IAVISMDNY------NDSSQIVDGNFDDPRVT 114
++GVAG + +GK + I+ L + +++ D++ + +++ D NFD P
Sbjct: 49 FVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPDAF 108
Query: 115 DYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSE-KXXXX 173
D E LLR + LK G+ V +P YDFKS R V+ S ++I+EGI + +
Sbjct: 109 DTEELLRVMDKLKHGEAVDIPKYDFKSYKSDALRRVN--PSDVIILEGILVFHDPRVREL 166
Query: 174 XXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
+ V + L +R+ RD ++ I+ Q S
Sbjct: 167 MNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYS 204
>Medtr3g061030.6 | phosphoribulokinase/uridine kinase | HC |
chr3:24230201-24237140 | 20130731
Length = 476
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 63 ILVGVAGPSGAGKTAFTEKILNILPG--IAVISMDNY------NDSSQIVDGNFDDPRVT 114
++GVAG + +GK + I+ L + +++ D++ + +++ D NFD P
Sbjct: 49 FVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPDAF 108
Query: 115 DYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSE-KXXXX 173
D E LLR + LK G+ V +P YDFKS R V+ S ++I+EGI + +
Sbjct: 109 DTEELLRVMDKLKHGEAVDIPKYDFKSYKSDALRRVN--PSDVIILEGILVFHDPRVREL 166
Query: 174 XXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
+ V + L +R+ RD ++ I+ Q S
Sbjct: 167 MNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYS 204
>Medtr3g061030.3 | phosphoribulokinase/uridine kinase | HC |
chr3:24230201-24237107 | 20130731
Length = 476
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 63 ILVGVAGPSGAGKTAFTEKILNILPG--IAVISMDNY------NDSSQIVDGNFDDPRVT 114
++GVAG + +GK + I+ L + +++ D++ + +++ D NFD P
Sbjct: 49 FVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPDAF 108
Query: 115 DYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSE-KXXXX 173
D E LLR + LK G+ V +P YDFKS R V+ S ++I+EGI + +
Sbjct: 109 DTEELLRVMDKLKHGEAVDIPKYDFKSYKSDALRRVN--PSDVIILEGILVFHDPRVREL 166
Query: 174 XXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
+ V + L +R+ RD ++ I+ Q S
Sbjct: 167 MNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYS 204
>Medtr3g061030.5 | phosphoribulokinase/uridine kinase | HC |
chr3:24230201-24237140 | 20130731
Length = 476
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 63 ILVGVAGPSGAGKTAFTEKILNILPG--IAVISMDNY------NDSSQIVDGNFDDPRVT 114
++GVAG + +GK + I+ L + +++ D++ + +++ D NFD P
Sbjct: 49 FVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPDAF 108
Query: 115 DYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSE-KXXXX 173
D E LLR + LK G+ V +P YDFKS R V+ S ++I+EGI + +
Sbjct: 109 DTEELLRVMDKLKHGEAVDIPKYDFKSYKSDALRRVN--PSDVIILEGILVFHDPRVREL 166
Query: 174 XXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
+ V + L +R+ RD ++ I+ Q S
Sbjct: 167 MNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYS 204
>Medtr5g096660.1 | phosphoribulokinase/uridine kinase | HC |
chr5:42271152-42278841 | 20130731
Length = 479
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 63 ILVGVAGPSGAGKTAFTEKILNILPG--IAVISMDNYNDS------SQIVDGNFDDPRVT 114
++GVAG S +GKTA + I+ L + +++ D++ + +++ D NFD P
Sbjct: 49 FVIGVAGGSASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTKEQLTRVQDYNFDHPEAF 108
Query: 115 DYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSE-KXXXX 173
D E LL + LK + V +P YDFK + V + ++I+EGI + +
Sbjct: 109 DSERLLSVMDKLKHSQAVDIPKYDFKCYKNDVFPARRVNPADVIILEGILVFHDPRVRAL 168
Query: 174 XXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
+ V + L +R+ RD + E ++ Q S
Sbjct: 169 MNMKIFVDTDADVRLARRIKRDTADNARNIEAVLDQYS 206
>Medtr7g029450.1 | phosphoribulokinase/uridine kinase | HC |
chr7:10536309-10543432 | 20130731
Length = 474
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 63 ILVGVAGPSGAGKTAFTEKILNILPG--IAVISMDNY------NDSSQIVDGNFDDPRVT 114
++GV+G + +GKT + I+ L + +++ D++ + + + NFD P
Sbjct: 54 FVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLKPEELEHVHEYNFDHPDAF 113
Query: 115 DYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSEK-XXXX 173
D E LL + L G+ V++PIYDFK R+ V +S ++I+EGI ++
Sbjct: 114 DTEQLLECTKKLISGQRVKIPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQDVRDL 173
Query: 174 XXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEII 207
+ V + L +R+ RD G++ ++
Sbjct: 174 MNMKIFVDTDADVRLARRIRRDTVERGRDINSVL 207
>Medtr3g061030.2 | phosphoribulokinase/uridine kinase | HC |
chr3:24230211-24236997 | 20130731
Length = 410
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 99 DSSQIVDGNFDDPRVTDYETLLRNIRDLKEGKPVQVPIYDFKSSSRTGYRTVDVPSSRIV 158
+ +++ D NFD P D E LLR + LK G+ V +P YDFKS R V+ S ++
Sbjct: 27 ERARVQDYNFDHPDAFDTEELLRVMDKLKHGEAVDIPKYDFKSYKSDALRRVN--PSDVI 84
Query: 159 IIEGIYALSE-KXXXXXXXXVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQIS 211
I+EGI + + + V + L +R+ RD ++ I+ Q S
Sbjct: 85 ILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYS 138