Miyakogusa Predicted Gene

Lj0g3v0350939.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0350939.2 Non Characterized Hit- tr|D8STA2|D8STA2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,25.25,0.005,coiled-coil,NULL,CUFF.24113.2
         (242 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g073890.1 | phosphoribulokinase/uridine kinase-like protei...   276   1e-74
Medtr8g069865.1 | phosphoribulokinase/uridine kinase-like protei...   261   4e-70
Medtr0227s0030.1 | transmembrane protein, putative | HC | scaffo...   220   1e-57
Medtr4g112790.2 | phosphoribulokinase/uridine kinase-like protei...   198   4e-51
Medtr4g112790.1 | phosphoribulokinase/uridine kinase-like protei...   197   6e-51
Medtr4g073890.2 | phosphoribulokinase/uridine kinase-like protei...    52   7e-07
Medtr4g112790.3 | phosphoribulokinase/uridine kinase-like protei...    51   1e-06

>Medtr4g073890.1 | phosphoribulokinase/uridine kinase-like protein |
           HC | chr4:28071140-28080133 | 20130731
          Length = 687

 Score =  276 bits (706), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/244 (63%), Positives = 189/244 (77%), Gaps = 4/244 (1%)

Query: 1   MPDDLRTKLRLDEDLMSSPKEALFKASTNALHVRHRRIRSDMSQSCTNQRDKNQAKVTGY 60
           +PDDL+TKL LDEDL+SSPKEAL +AS + + +R++ +RS +SQS TNQRDKN AKV GY
Sbjct: 444 LPDDLKTKLSLDEDLVSSPKEALSRASADMVALRNKNMRSGLSQSYTNQRDKNAAKVNGY 503

Query: 61  VSNNRVLHERDNSDSVTNLANQGAITILSEQISSLNDRMDEFTNQIQELNSKLTIKKNCA 120
            SNNR   ER NSDS T L N+GAI+ LSEQIS+LNDRMDEFTN+I+ELN KLT K N  
Sbjct: 504 FSNNRGFGER-NSDSSTTLVNKGAISQLSEQISALNDRMDEFTNRIEELNCKLTFKNNSP 562

Query: 121 SQQNIVLQAEACNGSAPTSHSITSWNNRSLTRPIIPNSSSPTQFAKETPLADE---IAMG 177
           SQQN+  QAEACNGSAPTS+ I S  N SLT   I +SSS +Q  K++PL DE   IA G
Sbjct: 563 SQQNMSAQAEACNGSAPTSYFINSLGNGSLTGSKISHSSSSSQLNKDSPLMDEISGIARG 622

Query: 178 QRQIIHQLDNLNNLLCGNTGDKPHQTRTNRKSVAPYSDSTGPNLILAVAVGCLGIFLVKG 237
           QRQI+HQ+DNLNNLL G+ G+K  QTRTN+K++   S+S    +I+ VAVGCLGIFL+KG
Sbjct: 623 QRQIMHQMDNLNNLLRGSLGEKSQQTRTNKKNITTDSNSIAATVIVVVAVGCLGIFLMKG 682

Query: 238 LLTR 241
           LLTR
Sbjct: 683 LLTR 686


>Medtr8g069865.1 | phosphoribulokinase/uridine kinase-like protein |
           HC | chr8:29534777-29540337 | 20130731
          Length = 654

 Score =  261 bits (667), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 152/246 (61%), Positives = 186/246 (75%), Gaps = 14/246 (5%)

Query: 1   MPDDLRTKLRLDEDLMSSPKEALFKASTNALHVRHRRIRSDMSQSCTNQRDKNQAKVTGY 60
           MPDDLRTKL L EDL S+PK A  + S++ + +RH R+RSD+SQS +NQ+D+NQAKVTG+
Sbjct: 417 MPDDLRTKLNLHEDLWSNPKAAFLRTSSDRVPMRHIRMRSDISQSSSNQKDENQAKVTGF 476

Query: 61  VSNNRVLHERDNSDSVTNLANQGAITILSEQISSLNDRMDEFTNQIQELNSKLTIKKNCA 120
           VSNNR  H + NSDS T   NQGAIT LSEQISSL+DRM EFTN+I+ELNSKLTIKKNC 
Sbjct: 477 VSNNRGFH-KSNSDSETKQENQGAITHLSEQISSLHDRMGEFTNRIEELNSKLTIKKNCP 535

Query: 121 SQQNIVLQAEACNGSAPTSHSITSWNNRSLTRPIIPNSSSPTQFAKETPLADE---IAMG 177
            QQN+ +QAE+ +GSAPTS+ ITS NN SL       +   +Q AKE+ L+DE   IA  
Sbjct: 536 IQQNMSVQAESYDGSAPTSYFITSLNNGSL-------NGLSSQLAKESHLSDEISGIARC 588

Query: 178 QRQIIHQLDNLNNLLCGNTGDKPHQTRTNRKSVAPYSDSTGPNLILAVAV--GCLGIFLV 235
           QR I++QLDNLNNL C N  +KPHQTR N KSV   SDS G ++++AVA+  GCLGIFL+
Sbjct: 589 QRHIMNQLDNLNNLFCRNLEEKPHQTRNNLKSVDSSSDSGGRHIMVAVAIGCGCLGIFLM 648

Query: 236 -KGLLT 240
            KGLLT
Sbjct: 649 KKGLLT 654


>Medtr0227s0030.1 | transmembrane protein, putative | HC |
           scaffold0227:18874-9378 | 20130731
          Length = 417

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/202 (62%), Positives = 149/202 (73%), Gaps = 4/202 (1%)

Query: 42  MSQSCTNQRDKNQAKVTGYVSNNRVLHERDNSDSVTNLANQGAITILSEQISSLNDRMDE 101
           +SQS TNQRDKN AKV GY SNNR   ER NSDS T   NQGAI+ LSEQIS+LNDRMDE
Sbjct: 2   LSQSYTNQRDKNAAKVNGYFSNNRGFGER-NSDSSTTQVNQGAISQLSEQISALNDRMDE 60

Query: 102 FTNQIQELNSKLTIKKNCASQQNIVLQAEACNGSAPTSHSITSWNNRSLTRPIIPNSSSP 161
           FTN+I+ELN KLT K N  SQQN+  QAEACNGSAPTS+ I S  N SLT   IP+SSS 
Sbjct: 61  FTNRIEELNCKLTFKNNSPSQQNMSAQAEACNGSAPTSYFINSLGNGSLTGSKIPHSSSS 120

Query: 162 TQFAKETPLADE---IAMGQRQIIHQLDNLNNLLCGNTGDKPHQTRTNRKSVAPYSDSTG 218
           +Q   ++PL DE   IA GQRQI+HQ+DNLNNLL G+ G+K  QTRTN+K++   S+S  
Sbjct: 121 SQLNTDSPLMDEISGIARGQRQIMHQMDNLNNLLRGSLGEKSQQTRTNKKNITTNSNSIA 180

Query: 219 PNLILAVAVGCLGIFLVKGLLT 240
             + + V VGCLGIFL+K + T
Sbjct: 181 ATVTVVVTVGCLGIFLMKVMST 202


>Medtr4g112790.2 | phosphoribulokinase/uridine kinase-like protein |
           HC | chr4:45926728-45932742 | 20130731
          Length = 545

 Score =  198 bits (503), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 108/241 (44%), Positives = 159/241 (65%), Gaps = 7/241 (2%)

Query: 1   MPDDLRTKLRLDEDLMSSPKEALFKASTNALHVRHRRIRSDMSQSCTNQRDKNQAKVTGY 60
           +P+DL+TKL +++D +SSPKEAL +AS +    R + +   ++QS +N+RDK    +T  
Sbjct: 305 LPEDLKTKLSIEDDSVSSPKEALSRASADR---RMKYLNRGVTQSYSNRRDKVLPNLTKL 361

Query: 61  VSNNRVLHERDNSDSVTNLANQGAITILSEQISSLNDRMDEFTNQIQELNSKLTIKKNCA 120
             NNR  + R   +S   +ANQG I  LS+QIS+LN+RMDEFT++I+ELNSK   KK  +
Sbjct: 362 AINNRSFNGR-ALESPAPIANQGVIIQLSDQISTLNERMDEFTSRIEELNSKFDFKKVSS 420

Query: 121 SQQNIVLQAEACNGSAPTSHSITSWNNRSLTRPIIPNSSSPTQFAKETPLADE---IAMG 177
           SQQN+ LQA+ CNGS PTS  +T  +N SLT  ++ NS+S +   +E+PL +E   +A G
Sbjct: 421 SQQNLALQADPCNGSGPTSLFVTGLSNGSLTGSMLANSTSSSHLVRESPLMEEVLLVARG 480

Query: 178 QRQIIHQLDNLNNLLCGNTGDKPHQTRTNRKSVAPYSDSTGPNLILAVAVGCLGIFLVKG 237
           QRQI+HQLD L+NL+    G++    RT++       +S    L+L +A+G +G+FL KG
Sbjct: 481 QRQIMHQLDTLSNLMQEYFGERSRMGRTDQAGGMREVESVAIPLVLTLAIGAVGVFLFKG 540

Query: 238 L 238
           L
Sbjct: 541 L 541


>Medtr4g112790.1 | phosphoribulokinase/uridine kinase-like protein |
           HC | chr4:45926728-45932742 | 20130731
          Length = 665

 Score =  197 bits (502), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 108/241 (44%), Positives = 159/241 (65%), Gaps = 7/241 (2%)

Query: 1   MPDDLRTKLRLDEDLMSSPKEALFKASTNALHVRHRRIRSDMSQSCTNQRDKNQAKVTGY 60
           +P+DL+TKL +++D +SSPKEAL +AS +    R + +   ++QS +N+RDK    +T  
Sbjct: 425 LPEDLKTKLSIEDDSVSSPKEALSRASADR---RMKYLNRGVTQSYSNRRDKVLPNLTKL 481

Query: 61  VSNNRVLHERDNSDSVTNLANQGAITILSEQISSLNDRMDEFTNQIQELNSKLTIKKNCA 120
             NNR  + R   +S   +ANQG I  LS+QIS+LN+RMDEFT++I+ELNSK   KK  +
Sbjct: 482 AINNRSFNGR-ALESPAPIANQGVIIQLSDQISTLNERMDEFTSRIEELNSKFDFKKVSS 540

Query: 121 SQQNIVLQAEACNGSAPTSHSITSWNNRSLTRPIIPNSSSPTQFAKETPLADE---IAMG 177
           SQQN+ LQA+ CNGS PTS  +T  +N SLT  ++ NS+S +   +E+PL +E   +A G
Sbjct: 541 SQQNLALQADPCNGSGPTSLFVTGLSNGSLTGSMLANSTSSSHLVRESPLMEEVLLVARG 600

Query: 178 QRQIIHQLDNLNNLLCGNTGDKPHQTRTNRKSVAPYSDSTGPNLILAVAVGCLGIFLVKG 237
           QRQI+HQLD L+NL+    G++    RT++       +S    L+L +A+G +G+FL KG
Sbjct: 601 QRQIMHQLDTLSNLMQEYFGERSRMGRTDQAGGMREVESVAIPLVLTLAIGAVGVFLFKG 660

Query: 238 L 238
           L
Sbjct: 661 L 661


>Medtr4g073890.2 | phosphoribulokinase/uridine kinase-like protein |
           HC | chr4:28071167-28077256 | 20130731
          Length = 483

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 33/39 (84%)

Query: 1   MPDDLRTKLRLDEDLMSSPKEALFKASTNALHVRHRRIR 39
           +PDDL+TKL LDEDL+SSPKEAL +AS + + +R++ +R
Sbjct: 444 LPDDLKTKLSLDEDLVSSPKEALSRASADMVALRNKNMR 482


>Medtr4g112790.3 | phosphoribulokinase/uridine kinase-like protein |
           HC | chr4:45926728-45932742 | 20130731
          Length = 522

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 4/82 (4%)

Query: 1   MPDDLRTKLRLDEDLMSSPKEALFKASTNALHVRHRRIRSDMSQSCTNQRDKNQAKVTGY 60
           +P+DL+TKL +++D +SSPKEAL +AS +    R + +   ++QS +N+RDK    +T  
Sbjct: 425 LPEDLKTKLSIEDDSVSSPKEALSRASADR---RMKYLNRGVTQSYSNRRDKVLPNLTKL 481

Query: 61  VSNNRVLHERDNSDSVTNLANQ 82
             NNR  + R   +S   +ANQ
Sbjct: 482 AINNRSFNGR-ALESPAPIANQ 502