Miyakogusa Predicted Gene

Lj0g3v0350409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0350409.1 tr|A7S6W7|A7S6W7_NEMVE Predicted protein
(Fragment) OS=Nematostella vectensis GN=v1g106861 PE=4
SV=1,32.89,0.00000000005,Found in ATP-dependent protease La
(LON),Peptidase S16, lon N-terminal; seg,NULL; ATP-DEPENDENT
PROT,CUFF.24079.1
         (543 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110340.1 | ATP-dependent protease LA (lon) domain protein...   736   0.0  
Medtr1g007160.1 | ATP-dependent protease LA (lon) domain protein...   676   0.0  
Medtr1g007160.2 | ATP-dependent protease LA (lon) domain protein...   676   0.0  
Medtr3g110340.2 | ATP-dependent protease LA (lon) domain protein...   649   0.0  

>Medtr3g110340.1 | ATP-dependent protease LA (lon) domain protein |
           HC | chr3:51505663-51501214 | 20130731
          Length = 531

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/485 (74%), Positives = 403/485 (83%), Gaps = 15/485 (3%)

Query: 59  AVDSSGVFTFNTSVASLHTYLGDVEDTRHRAAFFDGGTVLNVPLFCLPGVVLFPGATLPL 118
            + SS  FTFNTS+ASLHTYLGDVEDTRHR AF D G   N+PLF L GVVLFPGATLPL
Sbjct: 62  GIGSSDEFTFNTSIASLHTYLGDVEDTRHRTAFLDAGATFNLPLFSLQGVVLFPGATLPL 121

Query: 119 RVIEAHFVAAIDRALSQVDVPLTIGVIRIHRDTPNRRMKSATIGTTAEIRQYGRLENGSL 178
           RV    FVAAI+RALSQVDVP TIGV+R+HRDT +  M++A+ GTTA IRQYGRLE+GSL
Sbjct: 122 RVTVPRFVAAIERALSQVDVPYTIGVVRVHRDTESFTMQAASTGTTAVIRQYGRLEDGSL 181

Query: 179 NVVTRGQQRFRLRRCWVDVEGVPYGEVQIIEEDVPLRTPRDAFDQVPSSSNMSCSHAVLH 238
           NVVTRGQQRF LRR W DV+GVPYGE+QIIEED+PLRTPR  F +  SSSNM CSH    
Sbjct: 182 NVVTRGQQRFHLRRSWNDVDGVPYGEIQIIEEDLPLRTPRGIFGKSASSSNMPCSH---- 237

Query: 239 TPSSKHSHVKMEELKNGESDSEANSDGSFERELSQMERKIHLSVIGSSHVRDMMDESASS 298
                   VKM  LKNG+++S+AN D  FE ELS  ERK HLS IGSS    M D SA+S
Sbjct: 238 --------VKMHGLKNGQNNSDANPDEDFESELSPTERKAHLSAIGSSSASGMADVSANS 289

Query: 299 SDVKLMNKSDQEIRSNQDLSIGNCSTSGKQSSKEELNRCYKNVYNRPSHKISKTFLPHWV 358
           S V  M+ SDQEIRSN DLSI  CSTSGKQSSKEELNRCYKN+    S+KISK F PHWV
Sbjct: 290 SGVNFMHNSDQEIRSNLDLSIEKCSTSGKQSSKEELNRCYKNIQ---SYKISKAFWPHWV 346

Query: 359 YRMYDSYWLAQRAADMWKRIVGVPSMDSLIKTPDILSFHIASKIPMSESTRQELLEIDGI 418
           YRMYDSYWLAQRAADMWK+IVGVPSMDSL+K PD+LSFHIASKIP+SESTRQ+LL+IDGI
Sbjct: 347 YRMYDSYWLAQRAADMWKQIVGVPSMDSLVKKPDVLSFHIASKIPVSESTRQDLLDIDGI 406

Query: 419 AYRLRREIELLESIDVIRCKSCLTVIAKRSDMLVMSSEGPLGAYVNPGGYVHEIMTLYKA 478
            YRLRREIELL+SID++RC+ C T+IAKRSDMLVMS+EGPLGAYVNPGGYVHEIMTLYKA
Sbjct: 407 TYRLRREIELLDSIDLVRCRICQTIIAKRSDMLVMSNEGPLGAYVNPGGYVHEIMTLYKA 466

Query: 479 NGLALLGPPVTEYSWFPGYAWTIATCATCKIQMGWLFTATNKKMRPNSFWGIRSCQVAEQ 538
           NGL+L+G  VTEYSWFPGYAWTIA CATC+ QMGWLFT TNKK+RP+SFWGIRSCQVAE+
Sbjct: 467 NGLSLVGHAVTEYSWFPGYAWTIAKCATCRTQMGWLFTTTNKKLRPDSFWGIRSCQVAEE 526

Query: 539 KRQNL 543
            R+NL
Sbjct: 527 IRRNL 531


>Medtr1g007160.1 | ATP-dependent protease LA (lon) domain protein |
           HC | chr1:213875-206900 | 20130731
          Length = 556

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/496 (68%), Positives = 393/496 (79%), Gaps = 31/496 (6%)

Query: 64  GVFTFNTSVASLHTYLGDVEDTRHRAAFFDGGTVLNVPLFCLPGVVLFPGATLPLRVIEA 123
           G FT+NT +ASLHTYLGDVEDT HR+ F DGGTVL +P+FCL GVVLFPGATLPLRVIE+
Sbjct: 69  GEFTYNTCIASLHTYLGDVEDTHHRSTFLDGGTVLTLPIFCLQGVVLFPGATLPLRVIES 128

Query: 124 HFVAAIDRALSQVDVPLTIGVIRIHRDTPNRRMKSATIGTTAEIRQYGRLENGSLNVVTR 183
           +FVAA++++LS+VDVP TIGVIR+  DT NRRMK+A+IGTTAEIRQYGRLE+GSLNVVTR
Sbjct: 129 NFVAAVEKSLSRVDVPYTIGVIRVFSDTANRRMKTASIGTTAEIRQYGRLEDGSLNVVTR 188

Query: 184 GQQRFRLRRCWVDVEGVPYGEVQIIEEDVPLRTPRDAFDQVPSSSNMSCSHAVLHTPSSK 243
           GQQRFRLRRCW+DVEGVPYGE+QIIEED+P RTPRDAF ++   SN+ C+ A +    SK
Sbjct: 189 GQQRFRLRRCWIDVEGVPYGEIQIIEEDIPSRTPRDAFGKLTPLSNLPCNRASVL--PSK 246

Query: 244 HSHVKMEELKNGESDSEANSDGSFERELSQMERKIHLSVIGSSHVRDMMDESASSSDVKL 303
           +S V  +   N ESD+E     SFE ELS  ER+IH S+I SS      DESASS D K 
Sbjct: 247 YS-VDGQGSLNEESDTEE----SFENELSSTERRIHQSLIRSSF---EYDESASSGDDKF 298

Query: 304 MNKSDQEIRSNQ--------------------DLSIGNCSTSGKQSS-KEELNRCYKNVY 342
             +SDQEIRSN                     D  IG+CSTSGKQSS +E LN C KN  
Sbjct: 299 TYESDQEIRSNLNTPDTLTPLLPDHEKDAENLDSRIGSCSTSGKQSSIREGLNWCSKNRD 358

Query: 343 NRPSHKISKTFLPHWVYRMYDSYWLAQRAADMWKRIVGVPSMDSLIKTPDILSFHIASKI 402
              S + S+ FLP WVYRM+DSY LAQ+AADMWK+IVG PSMD+L+K PD+LSF IASKI
Sbjct: 359 LYSSRRTSRAFLPGWVYRMFDSYLLAQKAADMWKQIVGAPSMDALVKKPDVLSFSIASKI 418

Query: 403 PMSESTRQELLEIDGIAYRLRREIELLESIDVIRCKSCLTVIAKRSDMLVMSSEGPLGAY 462
           P+SESTRQELL+IDGI+YRLRREIELLESID+IRCK C  +IAKRSDMLVMSSEGP+GAY
Sbjct: 419 PVSESTRQELLDIDGISYRLRREIELLESIDLIRCKICQIIIAKRSDMLVMSSEGPVGAY 478

Query: 463 VNPGGYVHEIMTLYKANGLALLGPPVTEYSWFPGYAWTIATCATCKIQMGWLFTATNKKM 522
           VN  GYVHEI TLYKANGLAL GP +T+YSWFPGYAWTIA CATC+  MGWLFTATN+K+
Sbjct: 479 VNATGYVHEITTLYKANGLALTGPALTKYSWFPGYAWTIANCATCETHMGWLFTATNRKL 538

Query: 523 RPNSFWGIRSCQVAEQ 538
           +P SFWGIR+CQVA++
Sbjct: 539 KPKSFWGIRNCQVADE 554


>Medtr1g007160.2 | ATP-dependent protease LA (lon) domain protein |
           HC | chr1:213875-206900 | 20130731
          Length = 556

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/496 (68%), Positives = 393/496 (79%), Gaps = 31/496 (6%)

Query: 64  GVFTFNTSVASLHTYLGDVEDTRHRAAFFDGGTVLNVPLFCLPGVVLFPGATLPLRVIEA 123
           G FT+NT +ASLHTYLGDVEDT HR+ F DGGTVL +P+FCL GVVLFPGATLPLRVIE+
Sbjct: 69  GEFTYNTCIASLHTYLGDVEDTHHRSTFLDGGTVLTLPIFCLQGVVLFPGATLPLRVIES 128

Query: 124 HFVAAIDRALSQVDVPLTIGVIRIHRDTPNRRMKSATIGTTAEIRQYGRLENGSLNVVTR 183
           +FVAA++++LS+VDVP TIGVIR+  DT NRRMK+A+IGTTAEIRQYGRLE+GSLNVVTR
Sbjct: 129 NFVAAVEKSLSRVDVPYTIGVIRVFSDTANRRMKTASIGTTAEIRQYGRLEDGSLNVVTR 188

Query: 184 GQQRFRLRRCWVDVEGVPYGEVQIIEEDVPLRTPRDAFDQVPSSSNMSCSHAVLHTPSSK 243
           GQQRFRLRRCW+DVEGVPYGE+QIIEED+P RTPRDAF ++   SN+ C+ A +    SK
Sbjct: 189 GQQRFRLRRCWIDVEGVPYGEIQIIEEDIPSRTPRDAFGKLTPLSNLPCNRASVL--PSK 246

Query: 244 HSHVKMEELKNGESDSEANSDGSFERELSQMERKIHLSVIGSSHVRDMMDESASSSDVKL 303
           +S V  +   N ESD+E     SFE ELS  ER+IH S+I SS      DESASS D K 
Sbjct: 247 YS-VDGQGSLNEESDTEE----SFENELSSTERRIHQSLIRSSF---EYDESASSGDDKF 298

Query: 304 MNKSDQEIRSNQ--------------------DLSIGNCSTSGKQSS-KEELNRCYKNVY 342
             +SDQEIRSN                     D  IG+CSTSGKQSS +E LN C KN  
Sbjct: 299 TYESDQEIRSNLNTPDTLTPLLPDHEKDAENLDSRIGSCSTSGKQSSIREGLNWCSKNRD 358

Query: 343 NRPSHKISKTFLPHWVYRMYDSYWLAQRAADMWKRIVGVPSMDSLIKTPDILSFHIASKI 402
              S + S+ FLP WVYRM+DSY LAQ+AADMWK+IVG PSMD+L+K PD+LSF IASKI
Sbjct: 359 LYSSRRTSRAFLPGWVYRMFDSYLLAQKAADMWKQIVGAPSMDALVKKPDVLSFSIASKI 418

Query: 403 PMSESTRQELLEIDGIAYRLRREIELLESIDVIRCKSCLTVIAKRSDMLVMSSEGPLGAY 462
           P+SESTRQELL+IDGI+YRLRREIELLESID+IRCK C  +IAKRSDMLVMSSEGP+GAY
Sbjct: 419 PVSESTRQELLDIDGISYRLRREIELLESIDLIRCKICQIIIAKRSDMLVMSSEGPVGAY 478

Query: 463 VNPGGYVHEIMTLYKANGLALLGPPVTEYSWFPGYAWTIATCATCKIQMGWLFTATNKKM 522
           VN  GYVHEI TLYKANGLAL GP +T+YSWFPGYAWTIA CATC+  MGWLFTATN+K+
Sbjct: 479 VNATGYVHEITTLYKANGLALTGPALTKYSWFPGYAWTIANCATCETHMGWLFTATNRKL 538

Query: 523 RPNSFWGIRSCQVAEQ 538
           +P SFWGIR+CQVA++
Sbjct: 539 KPKSFWGIRNCQVADE 554


>Medtr3g110340.2 | ATP-dependent protease LA (lon) domain protein |
           HC | chr3:51505663-51501214 | 20130731
          Length = 484

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/438 (73%), Positives = 360/438 (82%), Gaps = 15/438 (3%)

Query: 59  AVDSSGVFTFNTSVASLHTYLGDVEDTRHRAAFFDGGTVLNVPLFCLPGVVLFPGATLPL 118
            + SS  FTFNTS+ASLHTYLGDVEDTRHR AF D G   N+PLF L GVVLFPGATLPL
Sbjct: 62  GIGSSDEFTFNTSIASLHTYLGDVEDTRHRTAFLDAGATFNLPLFSLQGVVLFPGATLPL 121

Query: 119 RVIEAHFVAAIDRALSQVDVPLTIGVIRIHRDTPNRRMKSATIGTTAEIRQYGRLENGSL 178
           RV    FVAAI+RALSQVDVP TIGV+R+HRDT +  M++A+ GTTA IRQYGRLE+GSL
Sbjct: 122 RVTVPRFVAAIERALSQVDVPYTIGVVRVHRDTESFTMQAASTGTTAVIRQYGRLEDGSL 181

Query: 179 NVVTRGQQRFRLRRCWVDVEGVPYGEVQIIEEDVPLRTPRDAFDQVPSSSNMSCSHAVLH 238
           NVVTRGQQRF LRR W DV+GVPYGE+QIIEED+PLRTPR  F +  SSSNM CSH    
Sbjct: 182 NVVTRGQQRFHLRRSWNDVDGVPYGEIQIIEEDLPLRTPRGIFGKSASSSNMPCSH---- 237

Query: 239 TPSSKHSHVKMEELKNGESDSEANSDGSFERELSQMERKIHLSVIGSSHVRDMMDESASS 298
                   VKM  LKNG+++S+AN D  FE ELS  ERK HLS IGSS    M D SA+S
Sbjct: 238 --------VKMHGLKNGQNNSDANPDEDFESELSPTERKAHLSAIGSSSASGMADVSANS 289

Query: 299 SDVKLMNKSDQEIRSNQDLSIGNCSTSGKQSSKEELNRCYKNVYNRPSHKISKTFLPHWV 358
           S V  M+ SDQEIRSN DLSI  CSTSGKQSSKEELNRCYKN+    S+KISK F PHWV
Sbjct: 290 SGVNFMHNSDQEIRSNLDLSIEKCSTSGKQSSKEELNRCYKNIQ---SYKISKAFWPHWV 346

Query: 359 YRMYDSYWLAQRAADMWKRIVGVPSMDSLIKTPDILSFHIASKIPMSESTRQELLEIDGI 418
           YRMYDSYWLAQRAADMWK+IVGVPSMDSL+K PD+LSFHIASKIP+SESTRQ+LL+IDGI
Sbjct: 347 YRMYDSYWLAQRAADMWKQIVGVPSMDSLVKKPDVLSFHIASKIPVSESTRQDLLDIDGI 406

Query: 419 AYRLRREIELLESIDVIRCKSCLTVIAKRSDMLVMSSEGPLGAYVNPGGYVHEIMTLYKA 478
            YRLRREIELL+SID++RC+ C T+IAKRSDMLVMS+EGPLGAYVNPGGYVHEIMTLYKA
Sbjct: 407 TYRLRREIELLDSIDLVRCRICQTIIAKRSDMLVMSNEGPLGAYVNPGGYVHEIMTLYKA 466

Query: 479 NGLALLGPPVTEYSWFPG 496
           NGL+L+G  VTEYSWFPG
Sbjct: 467 NGLSLVGHAVTEYSWFPG 484