Miyakogusa Predicted Gene

Lj0g3v0349869.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0349869.1 Non Characterized Hit- tr|G1Q362|G1Q362_MYOLU
Uncharacterized protein (Fragment) OS=Myotis lucifugus,24.12,1e-18,no
description,Armadillo-like helical; UNCHARACTERIZED,NULL; ARM
repeat,Armadillo-type fold; seg,NUL,CUFF.24021.1
         (353 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g034000.1 | armadillo/beta-catenin-like repeat protein | H...   493   e-139

>Medtr1g034000.1 | armadillo/beta-catenin-like repeat protein | HC |
           chr1:12286430-12296265 | 20130731
          Length = 459

 Score =  493 bits (1268), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/353 (71%), Positives = 288/353 (81%), Gaps = 7/353 (1%)

Query: 6   RTISQEAFDEMVKENIDDLDMEPAEALQDAIQTLTLQGVDLSGIVTCVPGESNPVIECLE 65
           R ISQEAF+++V ENI+DL+M+P EALQDAIQTLTLQGVDLSGIVT +PGESNPVIECLE
Sbjct: 9   RAISQEAFNDLVFENINDLEMDPTEALQDAIQTLTLQGVDLSGIVTSLPGESNPVIECLE 68

Query: 66  RLKRLDSEPXXXXXXXXXXXXXQIKDLCXXX--XXXXXXXTKNGAVELACSLCSKIAGSD 123
           +LK+ ++E              ++ +LC            TKNG VEL C +  KI  SD
Sbjct: 69  KLKQFENEDITLDEIVEVFD--KLVELCGGEDGNGNAAIATKNGGVELVCGVFEKIRSSD 126

Query: 124 AA---LLSAFNAIASMLRDVQSTGAFQRSNGPRIIVDILNDNKQKIDILDSGFHVVASAA 180
            +   L+S  NA+A +L DVQSTG FQ SNGPRII+ I+NDNKQ ID+L+S F VVASAA
Sbjct: 127 GSRVVLVSGLNALALLLHDVQSTGTFQNSNGPRIIIGIINDNKQNIDVLNSSFRVVASAA 186

Query: 181 TGDEIVKESFMELKVDELVMEIMSIHKNTGIQNVYDAIRALLTPDDNRVVASQVYGYARK 240
           TGDEIVK+SFMELKVDEL++EIMS+HKN GIQ++YDAIR LLTPDDNRV+ASQVYGYARK
Sbjct: 187 TGDEIVKDSFMELKVDELIVEIMSVHKNPGIQSLYDAIRVLLTPDDNRVLASQVYGYARK 246

Query: 241 FSKIGIADAIVDSLRAGLSSPHLVSACITLKAIAVNDEICKSIADKGGIDSVLRCIDDSG 300
           F+KIGI DA+VDSL  GLSSP LVSACITLKA AVNDEICKSIA+KGGID VL+CIDDSG
Sbjct: 247 FAKIGITDALVDSLHTGLSSPDLVSACITLKATAVNDEICKSIAEKGGIDVVLKCIDDSG 306

Query: 301 EQGNKAVAKVCCSLLSNLAGSDANKNAIVGKGGMDKLIKLSARCADDPSVLQE 353
           EQGN  VAKVCCSLLS LAGSDANK+AIVGKGGMDKLIKLSAR ADDP+VLQE
Sbjct: 307 EQGNTDVAKVCCSLLSKLAGSDANKSAIVGKGGMDKLIKLSARYADDPTVLQE 359