Miyakogusa Predicted Gene

Lj0g3v0349719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0349719.1 CUFF.24015.1
         (133 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g061880.1 | transmembrane protein, putative | LC | chr3:24...    69   1e-12
Medtr3g061870.1 | transmembrane protein, putative | LC | chr3:24...    69   1e-12
Medtr3g061850.1 | transmembrane protein, putative | LC | chr3:24...    68   3e-12
Medtr3g061900.3 | transmembrane protein, putative | HC | chr3:24...    67   3e-12
Medtr3g061900.1 | transmembrane protein, putative | HC | chr3:24...    67   4e-12
Medtr3g061760.1 | transmembrane protein, putative | LC | chr3:24...    56   9e-09
Medtr3g061800.1 | transmembrane protein, putative | LC | chr3:24...    56   1e-08
Medtr3g061900.2 | transmembrane protein, putative | HC | chr3:24...    51   2e-07
Medtr3g061920.1 | transmembrane protein, putative | LC | chr3:24...    49   1e-06
Medtr3g061780.1 | transmembrane protein, putative | LC | chr3:24...    49   1e-06

>Medtr3g061880.1 | transmembrane protein, putative | LC |
           chr3:24680200-24679796 | 20130731
          Length = 134

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 21  YDGSNTNPFQQSSPTLLVXXXXXXXXXXXXXXXXXXLRITSIVFHLSGVAACELLLWILL 80
           Y GS+TNPFQQSSP   +                  L  T I+FH SG+  CE LLWILL
Sbjct: 22  YQGSDTNPFQQSSPICFLFLTSVFCHVVATMADMS-LPTTMIIFHFSGLVGCETLLWILL 80

Query: 81  PDFWFTIVINXXXXXXXXXPCFVNCINNI 109
           P+FW   +IN          CF NCI++I
Sbjct: 81  PEFWNWYIINLFLLMVTSL-CFFNCIHDI 108


>Medtr3g061870.1 | transmembrane protein, putative | LC |
           chr3:24677157-24676747 | 20130731
          Length = 136

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 20  KYDGSNTNPFQQSSP---TLLVXXXXXXXXXXXXXXXXXXLRITSIVFHLSGVAACELLL 76
           K  GSNTNPFQQ SP     L                      T I+FH SG+  CE LL
Sbjct: 21  KCQGSNTNPFQQPSPIFFMFLASLFCHVVALQLASTANFSFLTTIIIFHFSGIVGCETLL 80

Query: 77  WILLPDFWFTIVINXXXXXXXXXPCFVNCINNINIRELLRRDGGDTAQIQNIE 129
           WILLPDFW   +IN          C+ NCI+  NI +L        AQ  N E
Sbjct: 81  WILLPDFWNWYIINLSLLAVTSL-CYFNCIH--NIPKLFLATLSTAAQPPNSE 130


>Medtr3g061850.1 | transmembrane protein, putative | LC |
           chr3:24673006-24672608 | 20130731
          Length = 132

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 20  KYDGSNTNPFQQSSPTLLVXXXXXXXXXXXXXXXXXXLRITSIVFHLSGVAACELLLWIL 79
           KY G NTNPFQQSS  +L+                     T I+FH SG+  CE LLWIL
Sbjct: 21  KYQGLNTNPFQQSSSLMLLFLTALFCHVVATIADMSS-PTTMIIFHFSGLVGCETLLWIL 79

Query: 80  LPDFWFTIVINXXXXXXXXXPCFVNCINNINIRELLRRDGGD 121
           LP+FW   +IN          CF N I+NI    L       
Sbjct: 80  LPEFWKCCIINLFLLVVTSF-CFFNSIHNITTFYLTTHSSAT 120


>Medtr3g061900.3 | transmembrane protein, putative | HC |
           chr3:24687903-24684265 | 20130731
          Length = 166

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 20  KYDGSNTNPFQQSSPTLLVXXXXXXXXXXXXXXXXXXLRITSIVFHLSGVAACELLLWIL 79
           KY G NTNPFQQS  TLL+                  L  T I+FH SG+ ACE LLWIL
Sbjct: 21  KYQGLNTNPFQQSPQTLLLFLTSIFCHVVSSTADLT-LPSTMIIFHFSGIVACETLLWIL 79

Query: 80  LPDFWFTIVINXXXXXXXXXPCFVNCINNI 109
           LP+FW   +IN          CF N I++I
Sbjct: 80  LPEFWNWYIINIFLLMVTTF-CFFNYIHSI 108


>Medtr3g061900.1 | transmembrane protein, putative | HC |
           chr3:24687903-24684265 | 20130731
          Length = 171

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 20  KYDGSNTNPFQQSSPTLLVXXXXXXXXXXXXXXXXXXLRITSIVFHLSGVAACELLLWIL 79
           KY G NTNPFQQS  TLL+                  L  T I+FH SG+ ACE LLWIL
Sbjct: 21  KYQGLNTNPFQQSPQTLLLFLTSIFCHVVSSTADLT-LPSTMIIFHFSGIVACETLLWIL 79

Query: 80  LPDFWFTIVINXXXXXXXXXPCFVNCINNI 109
           LP+FW   +IN          CF N I++I
Sbjct: 80  LPEFWNWYIINIFLLMVTTF-CFFNYIHSI 108


>Medtr3g061760.1 | transmembrane protein, putative | LC |
           chr3:24634529-24633608 | 20130731
          Length = 128

 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 57  LRITSIVFHLSGVAACELLLWILLPDFWFTIVINXXXXXXXXXPCFVNCINNINIRELLR 116
           L  T I+FH SGV  CE LLWILLP FW   +IN          CF NCI  +NI +L R
Sbjct: 32  LPTTMIIFHFSGVIGCETLLWILLPKFWNWYIINLFLLMVISL-CFFNCI--LNIPKLFR 88

Query: 117 RDGGDTAQIQNIES 130
            +    + ++  E+
Sbjct: 89  SNDAHPSNLEQQEA 102


>Medtr3g061800.1 | transmembrane protein, putative | LC |
           chr3:24656633-24656232 | 20130731
          Length = 108

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 60  TSIVFHLSGVAACELLLWILLPDFWFTIVINXXXXXXXXXPCFVNCINNINIRELLRRDG 119
           T  +FH SGV  CE LLWILLPDFW   +IN          CF NCI NI   +L     
Sbjct: 35  TMFIFHFSGVIGCETLLWILLPDFWNWYIINLFLLVITSF-CFFNCIQNIT--KLFLTAH 91

Query: 120 GDTAQIQNIE 129
            +T Q  N E
Sbjct: 92  SNTPQPPNPE 101


>Medtr3g061900.2 | transmembrane protein, putative | HC |
           chr3:24687865-24684265 | 20130731
          Length = 142

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 60  TSIVFHLSGVAACELLLWILLPDFWFTIVINXXXXXXXXXPCFVNCINNI 109
           T I+FH SG+ ACE LLWILLP+FW   +IN          CF N I++I
Sbjct: 31  TMIIFHFSGIVACETLLWILLPEFWNWYIINIFLLMVTTF-CFFNYIHSI 79


>Medtr3g061920.1 | transmembrane protein, putative | LC |
           chr3:24693472-24692993 | 20130731
          Length = 159

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 20  KYDGSNTNPFQQSSPTLLVXXXXXXXXXXXXXXXXXXLRITSIVFHLSGVAACELLLWIL 79
           KY+  NTNPF+  SPT+L+                  L  T  +FH SGV  CE LLWI+
Sbjct: 23  KYEALNTNPFKPLSPTMLLFLTSLCCHAVSSTADMS-LPATIYIFHFSGVVGCETLLWII 81

Query: 80  LPDFWFTIVINXXXXXXXXXPCFVNCINNIN 110
           L  F    ++N          C  NCI  ++
Sbjct: 82  LSQFSNWCIVNSFILVVTFV-CHTNCIKLVH 111


>Medtr3g061780.1 | transmembrane protein, putative | LC |
           chr3:24642103-24641663 | 20130731
          Length = 146

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 4/115 (3%)

Query: 20  KYDGSNTNPFQQSSPTLLVXXXXXXXXXXXXXXXXXXLRITSIVFHLSGVAACELLLWIL 79
           KY+  NTNPFQ  SPT+L+                  L  T  +FH SGV  CE LLWI+
Sbjct: 23  KYEALNTNPFQPLSPTMLLFLTSLCCHAVSSTADMS-LSATIYIFHFSGVVGCETLLWII 81

Query: 80  LPDFWFTIVINXXXXXXXXXPCFVNCINNINIRELLRRDGGDTAQIQN--IESPP 132
           L       ++N          C  NCI  ++       D    ++  N  + SPP
Sbjct: 82  LSQISNWCIVNSFILVVTFL-CHTNCIKLVHKLSCHTLDLFFLSKHSNSDVVSPP 135