Miyakogusa Predicted Gene
- Lj0g3v0349149.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0349149.2 tr|F6LPU5|F6LPU5_MEDTR Rop guanine nucleotide
exchange factor OS=Medicago truncatula
GN=MTR_5g081410,78.44,0,PRONE,Plant specific Rop nucleotide exchanger,
PRONE; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT,CUFF.23987.2
(378 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC | c... 550 e-156
Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC | c... 509 e-144
Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC | c... 366 e-101
Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC | c... 317 2e-86
Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC | c... 316 2e-86
Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC | ... 273 3e-73
Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC | c... 244 8e-65
Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC | c... 244 8e-65
Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC | c... 228 5e-60
Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC | c... 222 4e-58
Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC | c... 221 1e-57
Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC | c... 215 5e-56
Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC | c... 179 3e-45
>Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC |
chr5:34865519-34861053 | 20130731
Length = 576
Score = 550 bits (1416), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/385 (71%), Positives = 311/385 (80%), Gaps = 10/385 (2%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
MLL+ILDS A EFWYVDQGIV+ DADGSASFRKR QR+EEKWWLPVP+VPPAGLS+NSR
Sbjct: 195 MLLEILDSCTAMEFWYVDQGIVAPDADGSASFRKRNQRQEEKWWLPVPRVPPAGLSENSR 254
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
K+LNHTRE ASQILKAAMSIN AL EMEVPESYL+ LPKNGRTCLGDFIYRYITS+QF
Sbjct: 255 KKLNHTRESASQILKAAMSINSIALDEMEVPESYLDTLPKNGRTCLGDFIYRYITSDQFS 314
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMAD 180
HVALEIANR+EA+I+VW W+IVKDFM D
Sbjct: 315 QECLLDCIDISNEHVALEIANRLEAAIYVWRRRSHSKPPLYPSRSTTKSSWDIVKDFMVD 374
Query: 181 GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFNI 240
GDKRELLAERAE+IL+SLKQRFPGL+QTTLDTSKIQCNKDVGK+ILE YSRVLESMAFNI
Sbjct: 375 GDKRELLAERAESILISLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNI 434
Query: 241 VARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKA------LSPV 294
VARIDDLLYVDDLTKHSDRFPL P VN+VSQ+K+S+ + VSVS T HKA SPV
Sbjct: 435 VARIDDLLYVDDLTKHSDRFPLA-PMVNMVSQKKVSQQLPVSVSDTQHKAKFGTPSYSPV 493
Query: 295 PLISPARGDRERTPFLNINNNNIIKPQRRGFGVRRALSNYLGGETKATKMFSNAT-EVNG 353
PLISP++G E TPF++ NN+NIIKPQRRGFGV+R LSNYLGGE KA K+FSN++ EVN
Sbjct: 494 PLISPSKG--EITPFIHNNNSNIIKPQRRGFGVKRVLSNYLGGEMKAAKIFSNSSHEVNS 551
Query: 354 TNPNCNKTEQPECQKESHDMRSKTK 378
+NP+C +TEQ EC+ ES M+SKTK
Sbjct: 552 SNPSCKRTEQLECKNESCSMKSKTK 576
>Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC |
chr3:31131780-31127698 | 20130731
Length = 595
Score = 509 bits (1311), Expect = e-144, Method: Compositional matrix adjust.
Identities = 268/383 (69%), Positives = 297/383 (77%), Gaps = 19/383 (4%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
MLL+ILDS+ A EFWYVDQGIV+ D++GSASFRK IQR+EEKWWLPVP+VP AGL + SR
Sbjct: 213 MLLEILDSFTATEFWYVDQGIVAADSEGSASFRKSIQRQEEKWWLPVPRVPEAGLGEKSR 272
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
K+LNH+RE ASQILKAAMSIN ALAEMEVPESYLE LPKNGRTCLGDFIYRYITS+QF
Sbjct: 273 KKLNHSRESASQILKAAMSINSIALAEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFS 332
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMAD 180
H+ALEIANRVEA+I++W W +VKDFM D
Sbjct: 333 SECLLDCLDLSSEHIALEIANRVEAAIYLWRRRSNHRSTPNPNRSTTKSSWGMVKDFMLD 392
Query: 181 GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFNI 240
GDKRELLA RAENIL SLK RFPGLTQTTLDTSKIQCNKDVGK+ILE YSRVLESMA+NI
Sbjct: 393 GDKRELLAHRAENILSSLKHRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAYNI 452
Query: 241 VARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKA------LSP- 293
++RIDDLLYVD+LTKHSDRF LVP T N+VSQQ L R +VSVSGTPHKA SP
Sbjct: 453 ISRIDDLLYVDELTKHSDRFALVPTTGNMVSQQIL-RPFSVSVSGTPHKAAFGTPKFSPS 511
Query: 294 VPLISPARGDRERTPFLN------INNNNIIKPQRRGFGVRRALSNYLGGETKATKMFSN 347
VPLISP RG ERTPFL+ +NN N IKPQRRGFGVRRALSNYLG ETK TK +N
Sbjct: 512 VPLISPVRG--ERTPFLHNNNNNNVNNVNNIKPQRRGFGVRRALSNYLGVETK-TKTCAN 568
Query: 348 ATEVNGTNPNCNKTEQPECQKES 370
TEVNG+NP+ KTEQP QKE+
Sbjct: 569 TTEVNGSNPSSKKTEQP--QKET 589
>Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC |
chr7:23784213-23780879 | 20130731
Length = 656
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/349 (53%), Positives = 239/349 (68%), Gaps = 14/349 (4%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGS-ASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
MLL+I DS+ EFWYVDQG+++ DA S +SFR+ +QR+EEKWWLPVP+VPP GL + S
Sbjct: 297 MLLEIQDSFVDTEFWYVDQGVIAPDAGTSPSSFRQALQRQEEKWWLPVPRVPPCGLHEKS 356
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
RKQL H R+C SQILKAAM+IN LAEM++PESYLE+LPKN R LGD I+RYITS+ F
Sbjct: 357 RKQLQHKRDCTSQILKAAMAINSITLAEMDIPESYLESLPKNARISLGDVIHRYITSDHF 416
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H A+EIANR EAS+++W WE+VKD M
Sbjct: 417 SPECLLACLDLSSEHQAIEIANRAEASMYIWRKKTNSKPASVSGRSSSRTSWEMVKDLMV 476
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
D DKREL AERAE +LL+LKQRFPGL QT LD SKIQ NKDVGKAILE YSRVLES+AFN
Sbjct: 477 DADKRELFAERAETLLLTLKQRFPGLPQTALDMSKIQYNKDVGKAILESYSRVLESLAFN 536
Query: 240 IVARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKAL------SP 293
+V+RIDD+LYVDDLTK+SD+F V V++++ +S +V V TP+K+ SP
Sbjct: 537 MVSRIDDVLYVDDLTKNSDQFS-SHSKVGVITRKSISVPYSVPVPTTPYKSAFGTPTRSP 595
Query: 294 VPLISPARGDRERTPFLNINNNNIIKPQRRGFGVRRALSNYLGGETKAT 342
ISP++G ++P LN N K +RG GV+++L+++L + K +
Sbjct: 596 AHAISPSKGG--KSPLLNNGN----KTPQRGVGVKKSLTDFLSIDAKGS 638
>Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC |
chr3:31131780-31127698 | 20130731
Length = 435
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/219 (69%), Positives = 169/219 (77%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
MLL+ILDS+ A EFWYVDQGIV+ D++GSASFRK IQR+EEKWWLPVP+VP AGL + SR
Sbjct: 213 MLLEILDSFTATEFWYVDQGIVAADSEGSASFRKSIQRQEEKWWLPVPRVPEAGLGEKSR 272
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
K+LNH+RE ASQILKAAMSIN ALAEMEVPESYLE LPKNGRTCLGDFIYRYITS+QF
Sbjct: 273 KKLNHSRESASQILKAAMSINSIALAEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFS 332
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMAD 180
H+ALEIANRVEA+I++W W +VKDFM D
Sbjct: 333 SECLLDCLDLSSEHIALEIANRVEAAIYLWRRRSNHRSTPNPNRSTTKSSWGMVKDFMLD 392
Query: 181 GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNK 219
GDKRELLA RAENIL SLK RFPGLTQTTLDTSKIQCNK
Sbjct: 393 GDKRELLAHRAENILSSLKHRFPGLTQTTLDTSKIQCNK 431
>Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC |
chr4:6266234-6262535 | 20130731
Length = 542
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/276 (56%), Positives = 196/276 (71%), Gaps = 5/276 (1%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
MLL+ILDS+ EF YVDQG+++++ DGS+SF QR+EEKWWLPVPQVPP GL +NSR
Sbjct: 209 MLLEILDSFVNTEFRYVDQGVMARNEDGSSSF----QRQEEKWWLPVPQVPPCGLHENSR 264
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
KQL H R+CA+QI KAAM+IN LAEM+VP++YLE+LPK R LGD IY++ITSE F
Sbjct: 265 KQLQHKRDCANQISKAAMAINNITLAEMQVPDAYLESLPKTARGSLGDVIYKFITSEIFS 324
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMAD 180
H A++IANRVEASI++W W + KD + +
Sbjct: 325 PESLLASLEISSEHQAIKIANRVEASIYIWHKKTNSKPANRATRSSSRSSWGMFKDLIVE 384
Query: 181 GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFNI 240
GDK E+L ER E +LLSLKQ FP L QT+LD SKIQCNKDVGK+ILE YSRVLES+A NI
Sbjct: 385 GDKSEMLIERGETLLLSLKQHFPFLPQTSLDVSKIQCNKDVGKSILESYSRVLESLASNI 444
Query: 241 VARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLS 276
VARIDD+LYVD+LTKHSD+F + V V++ + +S
Sbjct: 445 VARIDDVLYVDNLTKHSDKFSSL-SKVGVITTKSIS 479
>Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC |
chr4:28908900-28905362 | 20130731
Length = 558
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/258 (51%), Positives = 172/258 (66%), Gaps = 4/258 (1%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
MLL +LD + +FWYVD+GIV D+ + + R+EEKWWLP P++PP GL ++ R
Sbjct: 200 MLLSMLDGFCDTQFWYVDRGIVLGDSKDCDDYGRPSVRQEEKWWLPSPKLPPNGLCEDDR 259
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
K+L R+C +QILKAAM+IN + LAEME+P +Y+E+LP+NG+ CLGD IYRYIT+ QF
Sbjct: 260 KRLQQCRDCTNQILKAAMAINSSVLAEMEIPAAYVESLPRNGKACLGDIIYRYITAGQFS 319
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXW-EIVKDFMA 179
H +IANR+EA+IHVW W VK +A
Sbjct: 320 SECLLDCLDLSSEHHTQDIANRIEAAIHVW---RLKDYKKLKKSGKARRSWGGKVKSLVA 376
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
DG+K L +RAE +L SLK+RFPGL QT LD +KIQ NKDVG++ILE YSRV+ES+AFN
Sbjct: 377 DGEKNHFLVQRAETLLQSLKRRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFN 436
Query: 240 IVARIDDLLYVDDLTKHS 257
I+ARIDD+LYVDD K S
Sbjct: 437 IMARIDDVLYVDDTVKRS 454
>Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC |
chr8:11477789-11473977 | 20130731
Length = 470
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 171/264 (64%), Gaps = 21/264 (7%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSA---------SFRKRIQREEEKWWLPVPQVP 51
ML++I DS++ EFWY +QG +S +++ S+ SFR QR++EKWWLPVP V
Sbjct: 210 MLIEIFDSFQDTEFWYAEQGSMSGNSNRSSHSNAGSKAGSFRIIAQRKDEKWWLPVPCVH 269
Query: 52 PAGLSDNSRKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIY 111
GLSD SRK L R+CA+QI KAAM+IN + LAEM++PE+Y+ LPK+GR+ LGD IY
Sbjct: 270 TGGLSDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDTIY 329
Query: 112 RYITS-EQFXXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXX 170
RY+ S ++F H ALE+A+RVE+S++ W
Sbjct: 330 RYMHSGDKFSPGNLLDCLKIRTEHEALELADRVESSMYTW--------RRKSCLSHSKSS 381
Query: 171 WEIVKDFMAD---GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILE 227
W VK+ MA+ DK LLAERAE +L LKQR+P L+QT+LDT KIQ N+DVGKA+LE
Sbjct: 382 WNKVKELMAETDHSDKNYLLAERAETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAVLE 441
Query: 228 GYSRVLESMAFNIVARIDDLLYVD 251
YSRVLE +AFNIVA I+D+L D
Sbjct: 442 SYSRVLEGLAFNIVAWIEDVLCAD 465
>Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC |
chr8:11478040-11473877 | 20130731
Length = 470
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 171/264 (64%), Gaps = 21/264 (7%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSA---------SFRKRIQREEEKWWLPVPQVP 51
ML++I DS++ EFWY +QG +S +++ S+ SFR QR++EKWWLPVP V
Sbjct: 210 MLIEIFDSFQDTEFWYAEQGSMSGNSNRSSHSNAGSKAGSFRIIAQRKDEKWWLPVPCVH 269
Query: 52 PAGLSDNSRKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIY 111
GLSD SRK L R+CA+QI KAAM+IN + LAEM++PE+Y+ LPK+GR+ LGD IY
Sbjct: 270 TGGLSDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDTIY 329
Query: 112 RYITS-EQFXXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXX 170
RY+ S ++F H ALE+A+RVE+S++ W
Sbjct: 330 RYMHSGDKFSPGNLLDCLKIRTEHEALELADRVESSMYTW--------RRKSCLSHSKSS 381
Query: 171 WEIVKDFMAD---GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILE 227
W VK+ MA+ DK LLAERAE +L LKQR+P L+QT+LDT KIQ N+DVGKA+LE
Sbjct: 382 WNKVKELMAETDHSDKNYLLAERAETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAVLE 441
Query: 228 GYSRVLESMAFNIVARIDDLLYVD 251
YSRVLE +AFNIVA I+D+L D
Sbjct: 442 SYSRVLEGLAFNIVAWIEDVLCAD 465
>Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC |
chr6:32999908-32996320 | 20130731
Length = 549
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/316 (41%), Positives = 188/316 (59%), Gaps = 29/316 (9%)
Query: 1 MLLDILDSYKAK-EFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
MLLDILD+++ + EFWYV + ++A+G+ QR+ +KWWLP+ +VPP GLSD +
Sbjct: 209 MLLDILDNFRDQNEFWYVSKS--DEEAEGNTV----TQRKSDKWWLPIVKVPPTGLSDVA 262
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
K + ++ +Q+LKAAM+IN L+EME+P++Y+E+LPKNGR LG+ IY+ IT E F
Sbjct: 263 VKWIQFEKDNVNQVLKAAMAINAQVLSEMEIPDNYIESLPKNGRESLGESIYKCITVEYF 322
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H L++ NR+EASI +W W
Sbjct: 323 DPGQFLSTMDMTTEHKVLDLKNRIEASIVIW---------KRKMNKDGKSSWSSAISM-- 371
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
+KREL ERAE ILL +KQ FPGL Q++LD SKIQ NKDVG+AILE YSRV+ES+A+
Sbjct: 372 --EKRELFEERAETILLMIKQEFPGLPQSSLDISKIQYNKDVGQAILESYSRVIESLAYT 429
Query: 240 IVARIDDLLYVDDLTKH------SDRFPL--VPPTVNVVSQQKLSRSMAVSVSGTPHKAL 291
+++RIDD+LYVD +TK+ S RF L +P + + S +S S TP ++
Sbjct: 430 VLSRIDDVLYVDSMTKNPSLAASSRRFSLDSLPMSDQTSPNSEDSGIGRMSSSDTP-PSM 488
Query: 292 SPVPLISPARGDRERT 307
+ + +GD +RT
Sbjct: 489 TLSDFMGWTKGDLKRT 504
>Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC |
chr7:29297652-29300584 | 20130731
Length = 532
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 170/307 (55%), Gaps = 64/307 (20%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
ML++ILDS++ EFWY + S +ASFR+ QR++EKWWLPVP V P GLS+ SR
Sbjct: 226 MLIEILDSFEDTEFWYAENVSASSPRLRAASFRRIAQRKDEKWWLPVPCVLPGGLSEKSR 285
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALP--------------------- 99
K L R+CA+QILKAAM+IN N LA++++PE+Y++ LP
Sbjct: 286 KHLTEKRDCANQILKAAMAINSNILADIDIPETYIDDLPQLKFYCQVIDDSFKCDPIRQM 345
Query: 100 -------------------------------KNGRTCLGDFIYRYI-TSEQFXXXXXXXX 127
K+GR LGD IY+Y+ T ++F
Sbjct: 346 SWNLSSNFISLLWKPIIAAESCKKRDDIIPYKSGRGNLGDTIYQYMYTVDKFSPERLLDC 405
Query: 128 XXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMADGD---KR 184
H AL++A+RVE+S++ W W+ VKD M D D K
Sbjct: 406 LKLSSEHEALDLADRVESSMYTWRRKACLSHSKSS--------WKEVKDLMDDTDWKDKN 457
Query: 185 ELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFNIVARI 244
+LA+RAE +L SLKQR+P L+QT+LD KIQ NKDVGKA+LE YSRVLE +AFN VA I
Sbjct: 458 YILADRAEALLFSLKQRYPELSQTSLDACKIQYNKDVGKAVLESYSRVLEGLAFNTVAWI 517
Query: 245 DDLLYVD 251
+D+LYVD
Sbjct: 518 EDVLYVD 524
>Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC |
chr4:3547567-3550746 | 20130731
Length = 400
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 161/257 (62%), Gaps = 21/257 (8%)
Query: 1 MLLDILDSYKAK-EFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
ML+D LD++K + EF+YV S+DAD + + ++KWWLP P+VP GLS+ +
Sbjct: 63 MLIDCLDNFKDQSEFYYV-----SKDADDPD---RSNGKNDDKWWLPTPKVPAEGLSEAA 114
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
R+ L + ++C +Q+LKAAM+IN L+EME+PESY+E+LPKNGR LGD IYR IT E F
Sbjct: 115 RRFLQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDIIYRNITDEFF 174
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H L++ NR+EASI +W W
Sbjct: 175 DPDQFLGTIDMSSEHKILDLKNRIEASIVIW--------RRKMNQKDSKSAWGSAVSL-- 224
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
+KREL ERAE ILL LK RFPGL Q++LD SKIQ N DVG+A+LE YSR+LES+AF
Sbjct: 225 --EKRELFEERAETILLLLKHRFPGLPQSSLDISKIQFNGDVGQAVLESYSRILESLAFT 282
Query: 240 IVARIDDLLYVDDLTKH 256
+++R++D+L+ D+ T++
Sbjct: 283 VLSRVEDVLHADNQTQN 299
>Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC |
chr2:43813630-43810264 | 20130731
Length = 533
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 154/252 (61%), Gaps = 19/252 (7%)
Query: 1 MLLDILDSYKAK-EFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNS 59
ML + LD++K + EF+YV + D D + + ++KWWLP P+VP GLSD +
Sbjct: 199 MLFECLDNFKDQNEFYYVSKDADDADGDNAKT------NSDDKWWLPTPKVPAEGLSDAA 252
Query: 60 RKQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQF 119
RK L + ++C +Q+LKAAM+IN L+EME+PE+Y+E+LPKNGR CLGD YR IT E F
Sbjct: 253 RKFLQYQKDCVNQVLKAAMAINAQVLSEMEIPENYIESLPKNGRACLGDAAYRSITVEFF 312
Query: 120 XXXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMA 179
H +++ N++EASI +W W
Sbjct: 313 DPDQFLSTMDLSSEHKVVDLKNKIEASIVIW--------KRKMNQKDNKSAWGSAVSL-- 362
Query: 180 DGDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFN 239
+KREL ERAE ILL +K RFPG+ Q++LD SKIQ N+DVG A+LE YSR+LES+AF
Sbjct: 363 --EKRELFEERAETILLLIKHRFPGIPQSSLDISKIQFNRDVGHAVLESYSRILESLAFT 420
Query: 240 IVARIDDLLYVD 251
+++RIDD+L VD
Sbjct: 421 VLSRIDDVLQVD 432
>Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC |
chr5:10622248-10613821 | 20130731
Length = 558
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 136/251 (54%), Gaps = 10/251 (3%)
Query: 1 MLLDILDSYKAKEFWYVDQGIVSQDADGSASFRKRIQREEEKWWLPVPQVPPAGLSDNSR 60
ML+D LDS EFWY + G ++ D S KR WWLP PQVP GLSD R
Sbjct: 231 MLIDALDSMVKTEFWYGEGGSRTEGKDMSVRHSKR-------WWLPSPQVPKTGLSDTER 283
Query: 61 KQLNHTRECASQILKAAMSINGNALAEMEVPESYLEALPKNGRTCLGDFIYRYITSEQFX 120
K+L H + Q+ KAA SIN N L EM VP +AL K+G+ LG +++ +T+E
Sbjct: 284 KRLVHQGKVVRQVFKAAKSINDNVLLEMPVPMVIRDALAKSGKANLGQELHKVLTAESTS 343
Query: 121 XXXXXXXXXXXXXHVALEIANRVEASIHVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMAD 180
H+ALE N++EA I W VK M++
Sbjct: 344 GEDMIKSLNLKSEHMALETINKLEAVIF---SLKERTMEQVTGKSPVRTSWSFVKGPMSE 400
Query: 181 GDKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKAILEGYSRVLESMAFNI 240
DK ELL +RAE +L LK R+P L QT LD +K+Q KD+G +I+E YSRVL ++AF+I
Sbjct: 401 ADKLELLLDRAETLLQLLKIRYPNLPQTFLDAAKVQYGKDIGHSIMEAYSRVLGNLAFSI 460
Query: 241 VARIDDLLYVD 251
++RI D+L D
Sbjct: 461 LSRIGDILQED 471