Miyakogusa Predicted Gene
- Lj0g3v0348799.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0348799.1 Non Characterized Hit- tr|I1LVX1|I1LVX1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18132
PE,76.06,0,seg,NULL; Tetraspannin,Tetraspanin/Peripherin; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_7263_length_830_cov_146.322891.path1.1
(188 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g129670.1 | tetraspanin family protein | HC | chr4:5404116... 249 2e-66
Medtr8g101600.1 | tetraspanin family protein | HC | chr8:4270409... 137 5e-33
Medtr8g066790.1 | tetraspanin family protein | HC | chr8:2777798... 137 7e-33
Medtr4g061010.1 | tetraspanin family protein | HC | chr4:2244942... 136 1e-32
Medtr6g033335.1 | tetraspanin family protein | HC | chr6:1067973... 129 2e-30
Medtr5g030070.1 | tetraspanin family protein | HC | chr5:1263909... 128 3e-30
Medtr1g095530.1 | tetraspanin family protein | HC | chr1:4297016... 126 2e-29
Medtr4g112570.1 | tetraspanin family protein | HC | chr4:4599853... 125 2e-29
Medtr5g097460.1 | tetraspanin family protein | HC | chr5:4268548... 117 6e-27
Medtr2g056130.1 | tetraspanin family protein | HC | chr2:2406959... 110 8e-25
Medtr8g097280.1 | tetraspanin family protein | HC | chr8:4074964... 105 2e-23
Medtr5g097450.1 | tetraspanin, putative | LC | chr5:42682881-426... 97 1e-20
Medtr8g097250.1 | tetraspanin, putative | LC | chr8:40733412-407... 50 9e-07
>Medtr4g129670.1 | tetraspanin family protein | HC |
chr4:54041164-54038606 | 20130731
Length = 266
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 136/188 (72%)
Query: 1 MFLLXXXXXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSC 60
MFLL NKGAGE+LS +GY+EYRLGDYSNWLQKRVN GNWNRI+SC
Sbjct: 78 MFLLIVVLFVFTIFAFVVTNKGAGESLSNKGYKEYRLGDYSNWLQKRVNDNGNWNRIKSC 137
Query: 61 LGSGKLCSEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYS 120
L SGKLC +F ++F+NDTA++FY ++L+ALQSGCCKPSNDCGFTYQ P+ W G Y+
Sbjct: 138 LQSGKLCIDFHSQFLNDTADKFYLQHLNALQSGCCKPSNDCGFTYQNPTNWTMPAGGTYT 197
Query: 121 NPDCHAWDNDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRN 180
NPDC W NDP VLCFNC+SCKAGLL N+KT+WKK YSIGCCAFRN
Sbjct: 198 NPDCDTWTNDPKVLCFNCKSCKAGLLDNLKTNWKKVAVVNIIFLIFLIIVYSIGCCAFRN 257
Query: 181 NRNDNWKR 188
NR D WKR
Sbjct: 258 NRRDGWKR 265
>Medtr8g101600.1 | tetraspanin family protein | HC |
chr8:42704090-42701405 | 20130731
Length = 269
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 26 ALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTAEQFYAE 85
+ RGY+E+RL +S+WL+ RV +G+W +I CL + +C + ++ TA+QF+
Sbjct: 103 VVPDRGYKEFRLDGFSSWLRHRVTGSGSWRKIMPCLAASDVCIKLTQNYI--TADQFFNS 160
Query: 86 NLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVN-YSNPDCHAWDNDPNVLCFNCQSCKAG 144
++S LQSGCCKP CG++Y P +W T VN ++ DC+ W+ND N LC+NC +CKAG
Sbjct: 161 HISPLQSGCCKPPTVCGYSYVSPIMW--TNPVNPMADSDCNLWNNDQNQLCYNCNACKAG 218
Query: 145 LLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRNDN 185
LL N++ +W+K Y I C AF+N + ++
Sbjct: 219 LLGNLRKEWRKANIILIVAVVVLIWVYVIACSAFKNAQTED 259
>Medtr8g066790.1 | tetraspanin family protein | HC |
chr8:27777981-27780805 | 20130731
Length = 269
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 21 KGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTAE 80
+G G R Y EYR+ D+S WL++RV S+ W+ I+SCL S +C+E + A+
Sbjct: 98 RGHGNIEPNRSYLEYRVDDFSFWLRRRVRSSHKWDGIKSCLSSSNMCAELNQSY--RIAQ 155
Query: 81 QFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCHAWDNDPNVLCFNCQS 140
F+ +LS LQSGCCKP CG+T+ P+ W N + DC W N+ LC+NC S
Sbjct: 156 DFFNAHLSPLQSGCCKPPTKCGYTFVNPTYWISPINTN-EDMDCMKWSNEQTQLCYNCDS 214
Query: 141 CKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRNDNWKR 188
CKAGLL I+ +W+K Y GC AFRN + + R
Sbjct: 215 CKAGLLATIRIEWRKANVILIVTLIGLILVYLFGCFAFRNAKTEELFR 262
>Medtr4g061010.1 | tetraspanin family protein | HC |
chr4:22449429-22444525 | 20130731
Length = 285
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 1 MFLLXXXXXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSC 60
MF + +KG+G + RGY +Y L DYS WL++RV S W +I SC
Sbjct: 79 MFFVIGVLIGFIIFAYVVTDKGSGRRVMNRGYLDYYLEDYSGWLEERVASDEYWGKISSC 138
Query: 61 LGSGKLCSEFRNRF--VNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVN 118
+ K C + F V +TA+ F+ L+ +QSGCCKP DCG+ YQ +VW + G+
Sbjct: 139 IRDSKACRKLARNFNDVPETADMFFERKLNPIQSGCCKPPTDCGYLYQNETVWIQGAGLV 198
Query: 119 YSNPDCHAWDNDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAF 178
+NPDC+ W+ND LC++C SCKAG+L ++K W+K Y + A+
Sbjct: 199 GTNPDCNKWNNDQQQLCYDCDSCKAGVLGSLKKSWRKVSVINIVVMIILVIVYIVAYYAY 258
Query: 179 RNNR 182
RNN+
Sbjct: 259 RNNK 262
>Medtr6g033335.1 | tetraspanin family protein | HC |
chr6:10679732-10677453 | 20130731
Length = 283
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 1 MFLLXXXXXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSC 60
M LL +G G + GR Y EY L +YS WL+KR+ W+ I+SC
Sbjct: 78 MLLLIGTIIGLTIFGFVVTTQGGGVEVPGRTYMEYHLQNYSPWLKKRIKDHQYWSTIKSC 137
Query: 61 LGSGKLCSEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYS 120
+ CS + + T+ + +LS +QSGCCKP C F N +
Sbjct: 138 IMGSNTCS----KLASWTSLDYMQRDLSPIQSGCCKPPTTCNF--------NMETTLVDQ 185
Query: 121 NPDCHAWDNDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRN 180
+ DC+ W+N PN+LC++C SCKAG+L+NI+TDW K YSIGCCAFRN
Sbjct: 186 DIDCYRWNNAPNLLCYDCDSCKAGVLENIRTDWHKVSVLSVVILVFLIGIYSIGCCAFRN 245
Query: 181 NR 182
R
Sbjct: 246 AR 247
>Medtr5g030070.1 | tetraspanin family protein | HC |
chr5:12639094-12641293 | 20130731
Length = 269
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 21 KGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTAE 80
+G G R Y EYRL D+S +L++RV S+ W+ IRSCL +C E F A+
Sbjct: 98 RGHGMIEPNRAYLEYRLDDFSGFLKRRVRSSFKWDAIRSCLSQTNMCGELNQSF--RMAQ 155
Query: 81 QFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCHAWDNDPNVLCFNCQS 140
F+ L+ +QSGCCKP C +T+ P+ W N ++ DC W ND LC+NC S
Sbjct: 156 DFFNARLTPMQSGCCKPPTQCAYTFVNPTYWISPIN-NAADMDCLQWSNDQTTLCYNCDS 214
Query: 141 CKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRNDNWKR 188
CKAGLL N++ +WK+ Y IGC AFRN + ++ R
Sbjct: 215 CKAGLLANLRKEWKRANVILIITVVVLIVVYLIGCFAFRNAKTEDLFR 262
>Medtr1g095530.1 | tetraspanin family protein | HC |
chr1:42970165-42968109 | 20130731
Length = 283
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 20 NKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTA 79
+KG G + GR Y EY L DYS WL+KR+ WN I++C+ K C ++ + T
Sbjct: 97 SKGGGVEVPGRSYSEYHLTDYSPWLKKRIQDPRYWNTIKNCILGSKTC----DKLASWTP 152
Query: 80 EQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCHAWDNDPNVLCFNCQ 139
+ ++S +QSGCCKP C + N + + DC+ W N+P +LC+ C
Sbjct: 153 LDYMQNDMSPIQSGCCKPPTACNY--------NMEAVMMTQDSDCYKWSNEPTLLCYECD 204
Query: 140 SCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNR 182
SCKAG+L++I+ +W K YSIGCCAFRN R
Sbjct: 205 SCKAGVLEDIRRNWHKLSVLTVTMLILLIGIYSIGCCAFRNAR 247
>Medtr4g112570.1 | tetraspanin family protein | HC |
chr4:45998533-45999649 | 20130731
Length = 270
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 2 FLLXXXXXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCL 61
FLL N+G G+ +SG+GY EYR+ D+S+WLQ+ V + NW+ +SCL
Sbjct: 82 FLLVLGLAFFTVFALFVTNRGVGKQISGKGYGEYRVADFSHWLQRYVVNEENWDEFKSCL 141
Query: 62 GSGKLCSEFRNRFVNDTA--EQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTE-GVN 118
+C +N VN + ++LS Q+GCCKP CGFT + + W + G+
Sbjct: 142 KDAHVC---QNLAVNGGRNNDSLIFKHLSTTQAGCCKPPVYCGFTMKNATFWEVPKSGLA 198
Query: 119 YSNPDCHAWDNDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAF 178
+N DC W+N LC++C +CK G+L NI+ W+ Y++GC A
Sbjct: 199 ANNSDCATWNNRQEKLCYDCNACKGGVLANIRNQWRHLTVFNGFVLVLVTAIYAMGCYAI 258
Query: 179 RNNRNDN 185
RNNR D+
Sbjct: 259 RNNRLDS 265
>Medtr5g097460.1 | tetraspanin family protein | HC |
chr5:42685481-42687089 | 20130731
Length = 318
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 77/111 (69%), Gaps = 6/111 (5%)
Query: 43 WLQKRVNSTGNWNRIRSCLGSGKLC-SEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDC 101
W+Q++VN+ +WNRI+SCL + C SE RN F + YA++ S +Q+ CCKPS+DC
Sbjct: 150 WMQEKVNNNYSWNRIKSCLQPQQFCGSENRNDF-----RKSYADHFSPIQNSCCKPSSDC 204
Query: 102 GFTYQGPSVWNKTEGVNYSNPDCHAWDNDPNVLCFNCQSCKAGLLQNIKTD 152
GFTY + W K E V Y+NPDC AW N+PN+ CF+CQ CK +++ +K+D
Sbjct: 205 GFTYLNSTTWTKPENVTYTNPDCDAWKNNPNISCFDCQCCKDDVVKLMKSD 255
>Medtr2g056130.1 | tetraspanin family protein | HC |
chr2:24069593-24068098 | 20130731
Length = 258
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 20 NKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTA 79
NK G+ +S +G+ EY++ D+S WLQ+ V + NWN I+SCL LC
Sbjct: 97 NKVVGQKVSDKGFGEYKVADFSLWLQQYVINDKNWNDIKSCLLGVGLCQ----------- 145
Query: 80 EQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTE-GVNYSNPDCHAWDNDPNVLCFNC 138
NLSA GCCKP CGFT + + W + G ++ DC W N N LC++C
Sbjct: 146 -----RNLSAAGVGCCKPPVQCGFTMKNATFWEVPKTGPAMNDTDCFTWKNKENKLCYDC 200
Query: 139 QSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRND 184
SCK +L NI+ W+ Y +GC A RNNR +
Sbjct: 201 NSCKGEVLANIRNQWRYLTIFNVCVLILLTSIYVLGCYAIRNNRRN 246
>Medtr8g097280.1 | tetraspanin family protein | HC |
chr8:40749643-40746704 | 20130731
Length = 294
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Query: 1 MFLLXXXXXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSC 60
+F + N G+G +++G Y+EY+L DYS+W K +N++ NW R+R+C
Sbjct: 79 LFFILVGILVFTVLVFIVTNNGSGHSVTGLRYKEYQLQDYSSWFLKELNNSHNWKRLRAC 138
Query: 61 LGSGKLCSEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYS 120
L + C+ R+ T +Q+ L+ +++GCC+P ++CG+ S ++ T
Sbjct: 139 LVKTEDCNNLSKRY--KTPKQYKLAKLTPIEAGCCRPPSECGYPAVNASYYDLTFQPVSP 196
Query: 121 NPDCHAWDNDPNVLCFNCQSCKAGLLQNIKTDWK 154
N DC + N V C++C SCKAG+ Q +K +W+
Sbjct: 197 NHDCKRYKNSRAVKCYDCDSCKAGVAQYMKIEWR 230
>Medtr5g097450.1 | tetraspanin, putative | LC |
chr5:42682881-42683645 | 20130731
Length = 206
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 60/111 (54%), Gaps = 17/111 (15%)
Query: 43 WLQKRVNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCG 102
WLQK+VN+ NW +SCL CS+ + ND +FY EN S +Q CCK N
Sbjct: 86 WLQKKVNNNNNWYAFKSCLQPQNFCSDLHSETPNDFFRKFYTENFSPIQYRCCKIRN--- 142
Query: 103 FTYQGPSVWNKTEGVNYSNPDCHAWDNDPNVLCFNCQSCKAGLLQNIKTDW 153
+ Y+NPDC W NDPN+ CF+CQSCKA LL I +DW
Sbjct: 143 --------------ITYTNPDCDFWSNDPNISCFDCQSCKADLLHVINSDW 179
>Medtr8g097250.1 | tetraspanin, putative | LC |
chr8:40733412-40732335 | 20130731
Length = 123
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 48 VNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQG 107
+N++ N ++R CL + C+ R+ +T +Q+ L+ ++GCC+P ++CG+
Sbjct: 34 LNNSHNLKQLRVCLVKTEDCNNISKRY--ETPKQYKLAKLTPTEAGCCQPPSECGYPAVN 91
Query: 108 PSVWNKTEGVNYSNPDCHAWDNDPNVLCFNCQ 139
S ++ T N DC + N N + C+
Sbjct: 92 ASYYDLTFHPVSPNHDCKRYKNSQNAIIVTCK 123