Miyakogusa Predicted Gene

Lj0g3v0348789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0348789.1 Non Characterized Hit- tr|B9SLL6|B9SLL6_RICCO
Putative uncharacterized protein OS=Ricinus communis G,47.62,0.001,
,CUFF.23950.1
         (256 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g081780.1 | ubiquitin-binding WIYLD domain protein | HC | ...   136   1e-32
Medtr1g014445.1 | hypothetical protein | HC | chr1:2944226-29437...    74   1e-13

>Medtr1g081780.1 | ubiquitin-binding WIYLD domain protein | HC |
           chr1:36393981-36397256 | 20130731
          Length = 295

 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 137/237 (57%), Gaps = 31/237 (13%)

Query: 20  LLIDKLHD------SFQATDDLTEDNPGDGPNEASYADDTVSASSETGNQPPIKSMDI-- 71
           LLID L +        Q  D L E NPG+GPNEAS +      S+ T   P   +MD   
Sbjct: 56  LLIDTLLEKQQNQNQNQNQDCLIEGNPGNGPNEASAS----GCSNRTLLLPCSSNMDASD 111

Query: 72  -VSATSEAVAELLIKADDISSGETGNQLPIKAMETISATSEAGAKLFIKA--DEISTSEA 128
                S+AV  +       ++ ETG+QLP+  ++T SATS+A  +L IK   +  +TS+ 
Sbjct: 112 DAPLPSQAVGTI------SAASETGHQLPM-TVDTASATSKAVIELPIKPVNNSATTSQP 164

Query: 129 GNQLPIKAVGTPSATSEAYAELLIKADDIS--TSEAGNQLSIKAVDTPSATRVTGNQVPI 186
            NQL I A  T +A S+   EL IK  D S  TS+  N  SIKAV T SAT    NQVP 
Sbjct: 165 SNQLSIMAADTETAASKTVNELPIKPVDTSSVTSQPSNPPSIKAVGTVSATNEINNQVPS 224

Query: 187 KAT-DTASADNESDCKPAPSPLTKSSRPVGKHCHKKRRPCHGWISYDNDEEDLIELP 242
           KA  +T SADN  +      P TKSS+P+GK CHKKRRPCHGWIS D+DEE+LIELP
Sbjct: 225 KAIIETVSADNGYEI-----PQTKSSQPIGKLCHKKRRPCHGWIS-DDDEEELIELP 275


>Medtr1g014445.1 | hypothetical protein | HC | chr1:2944226-2943735
           | 20130731
          Length = 133

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 69/125 (55%), Gaps = 30/125 (24%)

Query: 132 LPIKAVGTPSATSEA----------YAELLIKADDIST--SEAGNQLSIKAVDTPSATRV 179
           LP +AVGT SA SE             +L I A+D  T  S+  N+L IKA+ T SAT  
Sbjct: 9   LPSQAVGTISAASETASAISKAVIELKQLSIMAEDTETAASKTVNELPIKAIVTVSATNE 68

Query: 180 TGNQVPIKAT-DTASADNESDCKPAPSPLTKSSRPVGKHCHKKRRPCHGWISYDNDEE-D 237
             NQVPIKA  +T SADN  +      P TK           +RRPCHGWIS D++EE +
Sbjct: 69  INNQVPIKAIIETVSADNGYEI-----PQTK-----------RRRPCHGWISDDDEEEGE 112

Query: 238 LIELP 242
           LIELP
Sbjct: 113 LIELP 117