Miyakogusa Predicted Gene

Lj0g3v0348419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0348419.1 tr|I0Z139|I0Z139_9CHLO DUF1350-domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,38.33,0.0000000000005,DUF1350,Protein of unknown function
DUF1350,NODE_47747_length_1694_cov_56.427391.path2.1
         (409 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g014730.1 | DUF1350 family protein | HC | chr1:3519914-352...   638   0.0  
Medtr1g014730.2 | DUF1350 family protein | HC | chr1:3519914-352...   474   e-134
Medtr8g070480.2 | plant/MCA23-20 protein | HC | chr8:29997338-29...   145   7e-35
Medtr8g070480.1 | plant/MCA23-20 protein | HC | chr8:29997359-29...   145   8e-35

>Medtr1g014730.1 | DUF1350 family protein | HC |
           chr1:3519914-3524426 | 20130731
          Length = 399

 Score =  638 bits (1645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/409 (76%), Positives = 360/409 (88%), Gaps = 10/409 (2%)

Query: 1   MEMATSSFILGSNFKCMFSSKNTKILSGFGGFKHPYPHGLFSKSFHFYTLSPRMVAGRTK 60
           MEMATSS     NF   FSSKNT+ LS F G K+ + +  F+K F   +LS ++V+  T 
Sbjct: 1   MEMATSS-----NFNFTFSSKNTRYLSMFHGLKYQHSNS-FNKCFKLQSLSTKIVSATTN 54

Query: 61  MVSNVYVGRDTSIRISSKMFTELDSCLVIPPTPYRAKPRAIVKFLGGAFIGAVPEVTYGY 120
           + S++Y+GR+ S   S+K++T L+SCLVIPP P   KPRAI+KF+GGAF+GA+P++TYGY
Sbjct: 55  IASDMYIGRNNS---SNKIYTNLNSCLVIPP-PTSTKPRAIIKFIGGAFVGAIPQLTYGY 110

Query: 121 LIECLAKEGFLVVVVPYNVTFDHAQAAKQVYEKFHTCLDTLLTSGLPQANLSPAQLGDLP 180
           LIE LAKEGF+VVVVPYNVTFDH+ AAKQVY+KFH+ LDTLLTSGLPQANLSPAQLG LP
Sbjct: 111 LIELLAKEGFVVVVVPYNVTFDHSLAAKQVYDKFHSSLDTLLTSGLPQANLSPAQLGGLP 170

Query: 181 LFCVGHSNGALLQLLTGSLFSEKLPKANAIIAYNNRPATEAVPYFEQLGPAVSQMMPVME 240
           +F VGHSNGALLQ+LTGSLFSEKLPKANA+IAYNNRPATEAVPYFEQLGPAVSQMMP++E
Sbjct: 171 VFSVGHSNGALLQVLTGSLFSEKLPKANAVIAYNNRPATEAVPYFEQLGPAVSQMMPIVE 230

Query: 241 TNPVYSIARNASGDAWKMMLDSFGSIIQESEQELLNSLTKFVDQLPSVMNEITQGVSEFK 300
            NP+YSIARNA GDAWKM+LD+ GSI+QESE+E+LNSL+KFVDQLP VMNE+TQGVSEFK
Sbjct: 231 ANPIYSIARNAPGDAWKMVLDTVGSILQESEKEVLNSLSKFVDQLPLVMNEVTQGVSEFK 290

Query: 301 PTPSENRDCFKCSYNVENTLLVKFNSDAIDETDILEETLKPRVESFGGTLEKVLLNGNHI 360
           PTPSENRDCFK SYNV++TLLV+FNSD IDET+ILEETLKPRVESFGGT+EKV L+GNHI
Sbjct: 291 PTPSENRDCFKSSYNVKHTLLVQFNSDTIDETNILEETLKPRVESFGGTIEKVGLSGNHI 350

Query: 361 TACIQEPRWQVGKLYTPADAVAQVLKSLSLSDTRILARTISDWFRRFED 409
           T CIQEPRWQVGKLYTPADAVAQ LKS SLSDTRILARTISDWF+RFED
Sbjct: 351 TPCIQEPRWQVGKLYTPADAVAQRLKSFSLSDTRILARTISDWFKRFED 399


>Medtr1g014730.2 | DUF1350 family protein | HC |
           chr1:3519914-3524426 | 20130731
          Length = 319

 Score =  474 bits (1219), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/322 (72%), Positives = 278/322 (86%), Gaps = 10/322 (3%)

Query: 1   MEMATSSFILGSNFKCMFSSKNTKILSGFGGFKHPYPHGLFSKSFHFYTLSPRMVAGRTK 60
           MEMATSS     NF   FSSKNT+ LS F G K+ + +  F+K F   +LS ++V+  T 
Sbjct: 1   MEMATSS-----NFNFTFSSKNTRYLSMFHGLKYQHSNS-FNKCFKLQSLSTKIVSATTN 54

Query: 61  MVSNVYVGRDTSIRISSKMFTELDSCLVIPPTPYRAKPRAIVKFLGGAFIGAVPEVTYGY 120
           + S++Y+GR+ S   S+K++T L+SCLVIPP P   KPRAI+KF+GGAF+GA+P++TYGY
Sbjct: 55  IASDMYIGRNNS---SNKIYTNLNSCLVIPP-PTSTKPRAIIKFIGGAFVGAIPQLTYGY 110

Query: 121 LIECLAKEGFLVVVVPYNVTFDHAQAAKQVYEKFHTCLDTLLTSGLPQANLSPAQLGDLP 180
           LIE LAKEGF+VVVVPYNVTFDH+ AAKQVY+KFH+ LDTLLTSGLPQANLSPAQLG LP
Sbjct: 111 LIELLAKEGFVVVVVPYNVTFDHSLAAKQVYDKFHSSLDTLLTSGLPQANLSPAQLGGLP 170

Query: 181 LFCVGHSNGALLQLLTGSLFSEKLPKANAIIAYNNRPATEAVPYFEQLGPAVSQMMPVME 240
           +F VGHSNGALLQ+LTGSLFSEKLPKANA+IAYNNRPATEAVPYFEQLGPAVSQMMP++E
Sbjct: 171 VFSVGHSNGALLQVLTGSLFSEKLPKANAVIAYNNRPATEAVPYFEQLGPAVSQMMPIVE 230

Query: 241 TNPVYSIARNASGDAWKMMLDSFGSIIQESEQELLNSLTKFVDQLPSVMNEITQGVSEFK 300
            NP+YSIARNA GDAWKM+LD+ GSI+QESE+E+LNSL+KFVDQLP VMNE+TQGVSEFK
Sbjct: 231 ANPIYSIARNAPGDAWKMVLDTVGSILQESEKEVLNSLSKFVDQLPLVMNEVTQGVSEFK 290

Query: 301 PTPSENRDCFKCSYNVENTLLV 322
           PTPSENRDCFK SYNV++TLLV
Sbjct: 291 PTPSENRDCFKSSYNVKHTLLV 312


>Medtr8g070480.2 | plant/MCA23-20 protein | HC |
           chr8:29997338-29992708 | 20130731
          Length = 400

 Score =  145 bits (366), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 140/265 (52%), Gaps = 23/265 (8%)

Query: 76  SSKMFTELDSCLVIPPTPYRAKPRAIVKFLGGAFIGAVPEVTYGYLIECLAKEGFLVVVV 135
           SS  +T+++   ++ P    +KP  +V F+GG F+GA P++TY + +E L+++G L++  
Sbjct: 97  SSSDWTQVEGSWILKPK--SSKPNFVVHFVGGIFVGAAPQLTYRWFLERLSEKGVLIIAT 154

Query: 136 PYNVTFDHAQAAKQVYEKFHTCLDTLLTSGLPQANLSPAQLGDLPLFCVGHSNGALLQLL 195
           PY   FDH   A +V  KF  C  TL              + DLP+F VGHS G+L+ LL
Sbjct: 155 PYASGFDHFLIADEVQFKFDRCYRTL-----------DETVKDLPIFGVGHSLGSLVHLL 203

Query: 196 TGSLFSEKLPKANAIIAYNNRPATEAVPYFEQ-LGPAVSQMMPVMETNPVYSIARNASGD 254
            GS ++ +    N ++A+NN+ A+ ++P F   L P      P++  + ++S     +G 
Sbjct: 204 IGSRYAVQ-RSGNVLMAFNNKEASSSIPLFSPVLVPMAQNFAPLL--SDIFSSPTLRAGA 260

Query: 255 AWKMMLDSFGSIIQESEQELLNSLTKFVDQLPSVMNEITQGVSEFKPTPSENRDCFKCSY 314
             +M L      +Q     ++  +   V+QLP +  ++ +G  EF P P E R   K  Y
Sbjct: 261 --EMTLKQ----LQNVSPPIMKQVLPLVEQLPPLYMDLAKGREEFTPKPEETRRLIKSYY 314

Query: 315 NVENTLLVKFNSDAIDETDILEETL 339
            V   LL+KFN D+ID+T  L + L
Sbjct: 315 GVSRNLLIKFNDDSIDDTPTLAQVL 339


>Medtr8g070480.1 | plant/MCA23-20 protein | HC |
           chr8:29997359-29992708 | 20130731
          Length = 444

 Score =  145 bits (366), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 140/265 (52%), Gaps = 23/265 (8%)

Query: 76  SSKMFTELDSCLVIPPTPYRAKPRAIVKFLGGAFIGAVPEVTYGYLIECLAKEGFLVVVV 135
           SS  +T+++   ++   P  +KP  +V F+GG F+GA P++TY + +E L+++G L++  
Sbjct: 97  SSSDWTQVEGSWIL--KPKSSKPNFVVHFVGGIFVGAAPQLTYRWFLERLSEKGVLIIAT 154

Query: 136 PYNVTFDHAQAAKQVYEKFHTCLDTLLTSGLPQANLSPAQLGDLPLFCVGHSNGALLQLL 195
           PY   FDH   A +V  KF  C  TL  +           + DLP+F VGHS G+L+ LL
Sbjct: 155 PYASGFDHFLIADEVQFKFDRCYRTLDET-----------VKDLPIFGVGHSLGSLVHLL 203

Query: 196 TGSLFSEKLPKANAIIAYNNRPATEAVPYFEQ-LGPAVSQMMPVMETNPVYSIARNASGD 254
            GS ++ +    N ++A+NN+ A+ ++P F   L P      P++    ++S     +G 
Sbjct: 204 IGSRYAVQR-SGNVLMAFNNKEASSSIPLFSPVLVPMAQNFAPLLSD--IFSSPTLRAGA 260

Query: 255 AWKMMLDSFGSIIQESEQELLNSLTKFVDQLPSVMNEITQGVSEFKPTPSENRDCFKCSY 314
             +M L      +Q     ++  +   V+QLP +  ++ +G  EF P P E R   K  Y
Sbjct: 261 --EMTLKQ----LQNVSPPIMKQVLPLVEQLPPLYMDLAKGREEFTPKPEETRRLIKSYY 314

Query: 315 NVENTLLVKFNSDAIDETDILEETL 339
            V   LL+KFN D+ID+T  L + L
Sbjct: 315 GVSRNLLIKFNDDSIDDTPTLAQVL 339