Miyakogusa Predicted Gene
- Lj0g3v0348219.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0348219.1 tr|G7L6K3|G7L6K3_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_7g0,23.04,5e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.23910.1
(378 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 563 e-160
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 196 3e-50
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 126 3e-29
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 1e-26
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 115 7e-26
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 115 9e-26
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 112 7e-25
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 112 9e-25
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 3e-24
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 108 7e-24
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 108 7e-24
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 108 9e-24
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 108 1e-23
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 108 1e-23
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 107 3e-23
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 106 5e-23
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 105 7e-23
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 104 1e-22
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 103 2e-22
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 103 3e-22
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 4e-22
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 4e-22
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 103 4e-22
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 102 4e-22
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 4e-22
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 102 4e-22
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 4e-22
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 102 5e-22
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 102 5e-22
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 6e-22
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 6e-22
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 102 8e-22
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 9e-22
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 1e-21
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 1e-21
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 101 1e-21
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 100 2e-21
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 2e-21
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 100 2e-21
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 3e-21
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 3e-21
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 3e-21
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 100 3e-21
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 3e-21
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 100 3e-21
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 4e-21
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 4e-21
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 99 5e-21
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 99 5e-21
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 99 5e-21
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 99 5e-21
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 99 5e-21
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 99 5e-21
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 99 5e-21
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 99 5e-21
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 99 6e-21
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 99 6e-21
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 99 6e-21
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 99 8e-21
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 99 8e-21
Medtr3g023180.1 | PPR containing plant-like protein | HC | chr3:... 98 1e-20
Medtr3g023180.2 | PPR containing plant-like protein | HC | chr3:... 98 1e-20
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 98 1e-20
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 1e-20
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 97 2e-20
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 97 3e-20
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 97 3e-20
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 97 3e-20
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 97 4e-20
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 4e-20
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 5e-20
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 96 6e-20
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 96 6e-20
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 96 8e-20
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 95 9e-20
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 95 9e-20
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 95 9e-20
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 95 9e-20
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 95 9e-20
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 95 1e-19
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 95 1e-19
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 95 1e-19
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 94 2e-19
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 94 2e-19
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 2e-19
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 2e-19
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 94 2e-19
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 94 2e-19
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 94 2e-19
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 94 3e-19
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 93 5e-19
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 92 7e-19
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 92 7e-19
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 92 7e-19
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 7e-19
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 92 1e-18
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 1e-18
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 91 1e-18
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 91 1e-18
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 91 2e-18
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 3e-18
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 90 3e-18
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 4e-18
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 4e-18
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 89 6e-18
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 89 6e-18
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 89 6e-18
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 89 6e-18
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 89 8e-18
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 1e-17
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 88 1e-17
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 88 1e-17
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 88 1e-17
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 88 2e-17
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 87 2e-17
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 87 3e-17
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 87 3e-17
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 87 4e-17
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 5e-17
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 86 6e-17
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 86 6e-17
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 7e-17
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 86 9e-17
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 1e-16
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 1e-16
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 84 2e-16
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 84 2e-16
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 84 2e-16
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 84 2e-16
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 84 3e-16
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 84 3e-16
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 3e-16
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 83 5e-16
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 83 6e-16
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 82 6e-16
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 82 6e-16
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 82 6e-16
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 82 7e-16
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 7e-16
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 82 8e-16
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 82 1e-15
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 81 1e-15
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 81 2e-15
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 81 2e-15
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 2e-15
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 81 2e-15
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 3e-15
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 80 4e-15
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 80 4e-15
Medtr6g075180.1 | PPR containing plant-like protein | HC | chr6:... 80 5e-15
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 5e-15
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 79 5e-15
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 79 5e-15
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 7e-15
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 79 7e-15
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 8e-15
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 79 1e-14
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 79 1e-14
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 77 2e-14
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 77 2e-14
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 77 4e-14
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 77 4e-14
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 77 4e-14
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 77 4e-14
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 4e-14
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 76 4e-14
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 5e-14
Medtr7g099380.1 | PPR containing plant-like protein | HC | chr7:... 76 6e-14
Medtr5g088510.1 | PPR containing plant-like protein | LC | chr5:... 76 7e-14
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 75 8e-14
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 75 8e-14
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 75 8e-14
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 75 8e-14
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 9e-14
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 9e-14
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 75 1e-13
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 75 1e-13
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 75 1e-13
Medtr7g082160.1 | PPR containing plant-like protein | HC | chr7:... 75 1e-13
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 74 2e-13
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 74 2e-13
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr7g072070.1 | PPR containing plant-like protein | HC | chr7:... 74 3e-13
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 74 3e-13
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 74 3e-13
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 74 3e-13
Medtr6g071320.1 | PPR containing plant-like protein | HC | chr6:... 74 3e-13
Medtr4g068800.4 | PPR containing plant-like protein | HC | chr4:... 73 4e-13
Medtr4g068800.3 | PPR containing plant-like protein | HC | chr4:... 73 4e-13
Medtr4g068800.5 | PPR containing plant-like protein | HC | chr4:... 73 4e-13
Medtr4g068800.2 | PPR containing plant-like protein | HC | chr4:... 73 4e-13
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 73 4e-13
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 5e-13
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 6e-13
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 6e-13
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 8e-13
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 72 8e-13
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 72 1e-12
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 71 1e-12
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 71 2e-12
Medtr5g048070.1 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 3e-12
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 70 4e-12
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 5e-12
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 69 7e-12
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 69 7e-12
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 69 7e-12
Medtr0026s0200.1 | PPR containing plant-like protein | HC | scaf... 69 8e-12
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 69 1e-11
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 69 1e-11
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 69 1e-11
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 69 1e-11
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 68 1e-11
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 68 1e-11
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 68 1e-11
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 68 1e-11
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 68 1e-11
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 68 1e-11
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 68 1e-11
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 68 1e-11
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 68 1e-11
Medtr4g068800.1 | PPR containing plant-like protein | HC | chr4:... 68 1e-11
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 67 2e-11
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 67 3e-11
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 67 3e-11
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 67 3e-11
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 4e-11
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 4e-11
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 66 5e-11
Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 5e-11
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 5e-11
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 66 5e-11
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 66 5e-11
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 66 6e-11
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 7e-11
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 9e-11
Medtr7g085100.1 | PPR containing plant-like protein | HC | chr7:... 65 1e-10
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 64 2e-10
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 64 2e-10
Medtr2g018820.1 | PPR containing plant-like protein | HC | chr2:... 64 2e-10
Medtr2g018820.2 | PPR containing plant-like protein | HC | chr2:... 64 2e-10
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 64 2e-10
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 64 2e-10
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 64 2e-10
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 64 2e-10
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 3e-10
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 64 3e-10
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 64 3e-10
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 63 5e-10
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 6e-10
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 63 6e-10
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 62 7e-10
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 62 7e-10
Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 8e-10
Medtr8g098955.1 | PPR containing plant-like protein | HC | chr8:... 62 9e-10
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 62 1e-09
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-09
Medtr4g104790.1 | PPR containing plant protein | LC | chr4:43421... 62 1e-09
Medtr1g033840.1 | PPR containing plant-like protein | HC | chr1:... 62 1e-09
Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 2e-09
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 61 2e-09
Medtr5g088490.2 | PPR containing plant-like protein | LC | chr5:... 61 2e-09
Medtr5g088490.1 | PPR containing plant-like protein | LC | chr5:... 61 2e-09
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 61 2e-09
Medtr3g081310.1 | PPR containing plant protein | HC | chr3:36828... 61 2e-09
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 60 2e-09
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 60 3e-09
Medtr1g009650.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 3e-09
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 60 3e-09
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 4e-09
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 60 4e-09
Medtr7g104640.1 | PPR containing plant-like protein | HC | chr7:... 60 4e-09
Medtr2g060630.1 | PPR containing plant-like protein | HC | chr2:... 60 5e-09
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 60 5e-09
Medtr6g079340.1 | PPR containing plant-like protein | LC | chr6:... 59 6e-09
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 59 6e-09
Medtr4g094245.2 | PPR containing plant-like protein | HC | chr4:... 59 9e-09
Medtr4g094245.1 | PPR containing plant-like protein | HC | chr4:... 59 9e-09
Medtr6g079320.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 9e-09
Medtr8g463610.1 | PPR containing plant-like protein | HC | chr8:... 59 1e-08
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 59 1e-08
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 58 1e-08
Medtr4g108900.1 | PPR containing plant-like protein | HC | chr4:... 58 1e-08
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 58 1e-08
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 58 1e-08
Medtr3g108060.1 | PPR containing plant-like protein | HC | chr3:... 58 1e-08
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 58 1e-08
Medtr0652s0020.1 | PPR superfamily protein | LC | scaffold0652:7... 58 2e-08
Medtr1g054655.1 | PPR superfamily protein | LC | chr1:23786289-2... 58 2e-08
Medtr1g021250.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 2e-08
Medtr3g053000.1 | PPR containing plant-like protein | HC | chr3:... 58 2e-08
Medtr4g104830.1 | PPR containing plant protein | LC | chr4:43434... 57 2e-08
Medtr1g039290.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 3e-08
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 57 4e-08
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 57 4e-08
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 57 4e-08
Medtr7g028623.1 | PPR containing plant-like protein | HC | chr7:... 56 5e-08
Medtr8g058400.1 | PPR containing plant-like protein | HC | chr8:... 56 5e-08
Medtr2g007050.1 | PPR containing plant-like protein | HC | chr2:... 56 6e-08
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 6e-08
Medtr7g017610.1 | PPR containing plant-like protein | HC | chr7:... 56 6e-08
Medtr6g017035.1 | PPR containing plant-like protein | HC | chr6:... 56 7e-08
Medtr2g022860.1 | membrane-associated salt-inducible protein | H... 55 9e-08
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 55 2e-07
Medtr4g104800.1 | PPR containing plant protein | LC | chr4:43426... 54 2e-07
Medtr2g072170.1 | PPR containing plant-like protein | HC | chr2:... 54 2e-07
Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |... 54 2e-07
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 54 2e-07
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 54 2e-07
Medtr1g037260.1 | PPR containing plant protein | HC | chr1:13702... 54 2e-07
Medtr8g107230.1 | PPR containing plant-like protein | HC | chr8:... 54 3e-07
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 54 3e-07
Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 3e-07
Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 4e-07
Medtr7g005780.1 | PPR containing plant protein | HC | chr7:35224... 53 4e-07
Medtr2g099410.1 | PPR containing plant-like protein | HC | chr2:... 53 4e-07
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 4e-07
Medtr7g027940.1 | PPR containing plant-like protein | HC | chr7:... 53 5e-07
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 53 5e-07
Medtr2g090885.3 | PPR containing plant-like protein | HC | chr2:... 53 5e-07
Medtr2g090885.2 | PPR containing plant-like protein | HC | chr2:... 53 5e-07
Medtr2g090885.4 | PPR containing plant-like protein | HC | chr2:... 53 5e-07
Medtr2g090885.1 | PPR containing plant-like protein | HC | chr2:... 53 5e-07
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 53 5e-07
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 53 6e-07
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 6e-07
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 52 7e-07
Medtr5g044120.1 | PPR containing plant-like protein | HC | chr5:... 52 7e-07
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 52 7e-07
Medtr4g113830.1 | organelle transcript processing protein, putat... 52 8e-07
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 52 8e-07
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 52 8e-07
Medtr4g060570.1 | PPR containing plant-like protein | HC | chr4:... 52 8e-07
Medtr2g088910.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 8e-07
Medtr4g104860.1 | PPR containing plant protein | HC | chr4:43443... 52 1e-06
Medtr2g026600.1 | PPR containing plant protein | LC | chr2:96505... 52 1e-06
Medtr1g105580.1 | PPR domain protein | LC | chr1:47566832-475695... 51 2e-06
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 51 2e-06
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 50 3e-06
Medtr7g069300.1 | PPR containing plant-like protein | LC | chr7:... 50 3e-06
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:... 50 4e-06
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 50 4e-06
Medtr2g103550.2 | PPR containing plant-like protein | HC | chr2:... 50 5e-06
Medtr2g103550.1 | PPR containing plant-like protein | HC | chr2:... 50 5e-06
Medtr5g019860.1 | PPR containing plant-like protein | HC | chr5:... 50 5e-06
Medtr6g080140.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 5e-06
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 6e-06
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 49 7e-06
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 8e-06
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 563 bits (1450), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/356 (75%), Positives = 308/356 (86%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MKGDGG PD CTFNTLI+SHC AGNLDEA KVFENMK +V+ADSASYS+LIR LCQ+G
Sbjct: 359 MKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKG 418
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
DY KAE LFDELFEKEI+L +G +PLAASYK +FQYLCE+GKT+KAERVLRQ+MKRGTQ
Sbjct: 419 DYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ 478
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
DPLSY VI+GHC+EG+YENGY LL+WMLRRDFLPD++IYD LIDGFL+KDKPLLA ETL
Sbjct: 479 DPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETL 538
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
EKMLKSSY P+TSTWHSIL RLLE+G HESA V VMML+RNIRQNIN STK ++LLF
Sbjct: 539 EKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDR 598
Query: 241 GHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
G +DKAF+I EL+YK GFCVK++EVVQFLC + + EA KLLLFSLKN+ N+DI LCN V
Sbjct: 599 GLQDKAFKITELIYKNGFCVKMDEVVQFLCNKRRALEACKLLLFSLKNNENIDIGLCNIV 658
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIP 356
IL LC++N+ EAF LCYELV+KGLHQ+L CLNDLV ALEA G+ EEAAFISKR+P
Sbjct: 659 ILDLCKLNKASEAFSLCYELVDKGLHQDLICLNDLVAALEAGGRTEEAAFISKRVP 714
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 168/382 (43%), Gaps = 28/382 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT T+N LI C +DE F+ M +F D +Y+ L+ LC+ G A
Sbjct: 221 GVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVA 280
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L + + +K CK S P +Y + + C + +A +L ++ RG + + ++
Sbjct: 281 HNLVNGMSKK----CKDLS-PDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVT 335
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRD--FLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y T+I G C ++ E+L M + D +PD ++ LI+ A + E
Sbjct: 336 YNTLIKGLCEAQKWDKMKEILEQM-KGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFEN 394
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST-------KSIE 235
M K ++++ ++ L +KG ++ M+ D + I LS+ S +
Sbjct: 395 MKKLEVSADSASYSVLIRTLCQKGDYGKAE----MLFDELFEKEILLSSYGPKPLAASYK 450
Query: 236 LLFGH----GHRDKAFEIVELLYKKGFCVKIEEVVQFL--CKRGKLPEARKLLLFSLKNH 289
+F + G KA ++ L K+G + + L CK G LL++ L+
Sbjct: 451 CMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRD 510
Query: 290 HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
DID+ + +I G ++ L A ++++ + + + ++ L +G V E+A
Sbjct: 511 FLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESA 570
Query: 350 FISKRIPGLENLDRSVLSYSSK 371
+ + LE R +++S+K
Sbjct: 571 GVI--VMMLERNIRQNINFSTK 590
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 147/346 (42%), Gaps = 44/346 (12%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
FN+LI S+ AG E++K+FENMK V+ +++ ++ L +RG + A++++DE+
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 74 EKEIV-------------LCK----------------FGSQPLAASYKPIFQYLCEHGKT 104
+ V CK F P +Y + LC GK
Sbjct: 218 KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKI 277
Query: 105 RKAERVLRQIMKRG---TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYD 161
+ A ++ + K+ + D ++Y T+I G+CR+ + ++L M R P++ Y+
Sbjct: 278 KVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYN 337
Query: 162 CLIDGFLQKDKPLLAMETLEKML-KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLD 220
LI G + K E LE+M +P T+++++ G E+ +V M
Sbjct: 338 TLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKK 397
Query: 221 RNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK----------KGFCVKIEEVVQFLC 270
+ + + I L G KA + + L++ K + + Q+LC
Sbjct: 398 LEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLC 457
Query: 271 KRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
+ GK +A ++L +K + VILG C+ +GL
Sbjct: 458 ENGKTKKAERVLRQLMKRGTQDPLSY-QIVILGHCKEGSYENGYGL 502
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 137/329 (41%), Gaps = 18/329 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEA---LKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
GFS + T+ ++ NL+ A L E N +V + ++ LIR+ + G +
Sbjct: 112 GFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLF 171
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR-GTQ- 120
++ KLF+ + K I G P ++ + L + G+T A+ V +++K G +
Sbjct: 172 KESVKLFENM--KLI-----GVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKP 224
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D +Y +I G C+ + G+ M D PDV Y+ L+DG + K +A +
Sbjct: 225 DTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLV 284
Query: 181 EKMLK--SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
M K P T+ +++ K E+ + M R ++ NI I+ L
Sbjct: 285 NGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLC 344
Query: 239 GHGHRDKAFEIVELLYKKGFCV----KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
DK EI+E + G + ++ C G L EA K+ K + D
Sbjct: 345 EAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADS 404
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEK 323
+ +I LC+ +A L EL EK
Sbjct: 405 ASYSVLIRTLCQKGDYGKAEMLFDELFEK 433
>Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14710511-14713103 | 20130731
Length = 745
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 189/347 (54%), Gaps = 1/347 (0%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D F L+ C GNLD A+ V M + ++ Y +LI N C+ YD+AEKL
Sbjct: 379 DNSVFMKLMECQCKGGNLDAAVDVLNAMIRLSIPTEAGHYGVLIENFCKANVYDRAEKLL 438
Query: 70 DELFEKEIVLCKFGSQPLAAS-YKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
D+L EK+IVL S + AS Y + YLC++GKT KAE RQ+MK+G DP+++ +
Sbjct: 439 DKLIEKDIVLRPETSYEMEASAYNRMIGYLCDNGKTAKAEMFFRQLMKKGVLDPVAFNNL 498
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ GH +EG ++ +E+ M RR D Y LI+ +L+K +P A L+ ML+ +
Sbjct: 499 MCGHSKEGNPDSAFEIATIMSRRKVHSDEYSYRLLIESYLRKGEPADAKTALDHMLEGGH 558
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
P +S + S++ L E G ++RV M+++ ++ N++L +K +E LF GH ++A
Sbjct: 559 EPNSSLYRSVMESLFEDGRVQTASRVMKNMVEKGVKNNMDLVSKILEALFIRGHVEEALG 618
Query: 249 IVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEIN 308
++LL G + ++ LC++ K A +LL F L+ +D + V+ L
Sbjct: 619 RIDLLMNSGCEPDFDHLLSILCEKEKRIAALRLLDFVLERDIIIDFSNYDKVLDTLLAAG 678
Query: 309 RVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+ L A+ + +++EK + + ++L+ +L +G ++A +S+ +
Sbjct: 679 KTLNAYSILCKIMEKRGATDWSSRDELIKSLNQQGNTKQADVLSRMV 725
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 172/361 (47%), Gaps = 31/361 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NTLIH +DEA +F MK + + SY+ +++ G D+A
Sbjct: 269 GIEPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLMPNVISYTTMLKGFVDVGKVDRA 328
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR--GTQDPL 123
++F+E+ + C G +P A ++ + LC+ K +A VL ++++R +D
Sbjct: 329 FEVFEEMKD-----C--GIKPNAVTFTTLLPGLCDADKMVEAGNVLGEMVERYIAPKDNS 381
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+M ++ C+ G + ++L M+R + Y LI+ F + + A + L+K+
Sbjct: 382 VFMKLMECQCKGGNLDAAVDVLNAMIRLSIPTEAGHYGVLIENFCKANVYDRAEKLLDKL 441
Query: 184 L--------KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
+ ++SY + S ++ ++ L + G ++ ++ + + + +
Sbjct: 442 IEKDIVLRPETSYEMEASAYNRMIGYLCDNGKTAKAEMFFRQLMKKGVLDPVAFNN---- 497
Query: 236 LLFGH---GHRDKAFEIVELLYKKGFCVKIEE-----VVQFLCKRGKLPEARKLLLFSLK 287
L+ GH G+ D AFEI ++ ++ V +E +++ ++G+ +A+ L L+
Sbjct: 498 LMCGHSKEGNPDSAFEIATIMSRRK--VHSDEYSYRLLIESYLRKGEPADAKTALDHMLE 555
Query: 288 NHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
H + L +V+ L E RV A + +VEKG+ + ++ ++ AL RG VEE
Sbjct: 556 GGHEPNSSLYRSVMESLFEDGRVQTASRVMKNMVEKGVKNNMDLVSKILEALFIRGHVEE 615
Query: 348 A 348
A
Sbjct: 616 A 616
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 161/349 (46%), Gaps = 13/349 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + FN L+ C +G+ +A+ +F MK + D SY+ +I LC+ +A
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++LF E+ E CK P + ++ + C++G + +L ++ K G + D
Sbjct: 184 KELFKEMKGGE---CK----PNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C +G E G EL MLR++ P+V Y CL++ +K K A + L+ M
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P + + L + G ++ +V +M+ R N I L G D
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKL--LLFSLKNHHNVDIDLCNA 299
A I+E + KKG V +V+ LC GK+ EA L LL S + H D+ N
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
VI LC+ R+ A + Y +VE+G + N L+ + GK+ +A
Sbjct: 417 VIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKA 465
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 35/382 (9%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MKG G P++ TF+ LI C G+++E + E M+ + D YS LI C +G
Sbjct: 190 MKG-GECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKG 248
Query: 61 DYDKAEKLFDELFEKEIV------------LCKFGS----------------QPLAASYK 92
D ++ ++LF+E+ K + LCK +P +Y
Sbjct: 249 DIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYT 308
Query: 93 PIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRR 151
+ L ++G+ A +VL ++KRG + + ++Y +I G C+EG ++ +L M ++
Sbjct: 309 VLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKK 368
Query: 152 DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY--LPKTSTWHSILARLLEKGFPH 209
PDV Y L+ G K A++ L ++ + P ++ ++ L ++
Sbjct: 369 GKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLR 428
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVV 266
+ RV M++R NI I+ G KA E+ + G ++
Sbjct: 429 HAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLI 488
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
LCK L A+ L + + N ++ LC + V +A L E+
Sbjct: 489 NGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHD 548
Query: 327 QELTCLNDLVTALEARGKVEEA 348
++ N ++ G VE A
Sbjct: 549 PDVVSFNIIIDGTLKAGDVESA 570
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 10/228 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + T+N LI + SAG L +AL+++++ + ++ ++A+Y++LI LC+ A
Sbjct: 441 GFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIA 500
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
+ LF++ G++P + Y + LC +A R L Q M+ DP +
Sbjct: 501 KGLFNKKRAS-------GTRPTVSEYNTLMASLCRESSVEQA-RNLFQEMRNANHDPDVV 552
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
S+ +I G + G E+ ELL+ ML + +PD + LI+ FL+ + A E+M
Sbjct: 553 SFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERM 612
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ ++P + S+L KG + + M D+++ + L++
Sbjct: 613 VSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTS 660
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 35/353 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD T+N LI + C G LD AL+V + + +Y+ILI +G D+A
Sbjct: 176 GFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEA 235
Query: 66 EKLFDELFEKEIV------------LCKFGSQPLA----------------ASYKPIFQY 97
KL DE+ + + +CK G A ++Y + +
Sbjct: 236 MKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRD 295
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
L GK E+++ ++ +G + +P++Y T+I CR+G + +L M + PD
Sbjct: 296 LLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPD 355
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
YD LI ++ K LA+E L+ M+ +LP +++SILA L + G E+ +
Sbjct: 356 GYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFE 415
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRG 273
+ + N L+ G + +A ++ + G + ++ LC+ G
Sbjct: 416 KLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDG 475
Query: 274 KLPEARKLL--LFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
+ +A +LL +F + I N V+LGLC++ R+++A + +V +G
Sbjct: 476 LVDQAIELLVDMFESEKCQPTVISY-NTVLLGLCKVQRIIDAIEVLAAMVNEG 527
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 155/366 (42%), Gaps = 11/366 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD +N +I C A +D A KV + MK D +Y+ILI N C RG D A ++
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
D+L + CK P +Y + + G +A ++L +++ RG + D +Y
Sbjct: 204 MDQLLKDN---CK----PTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
V+ G C+EG + +E L + + + V Y+ L+ L + K + + ML
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ +++ L G E+ V +M ++ + + I L G D A
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376
Query: 248 EIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
E ++ + G I ++ LCK G EA + + + N + L
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGAL 436
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRS 364
+ A G+ E++ G+ + N L++ L G V++A + + E +
Sbjct: 437 WSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPT 496
Query: 365 VLSYSS 370
V+SY++
Sbjct: 497 VISYNT 502
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 21/322 (6%)
Query: 57 CQRGDYDKA----EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLR 112
C+ YD++ + + + ++ +++LC + + K KA +V+
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCT-----------KLIKGFFNMKKIEKAIQVME 136
Query: 113 QIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDK 172
+ K G D +Y VI G C+ ++ ++L M +R F PDV Y+ LI F + +
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 173 PLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTK 232
LA+ ++++LK + P T+ ++ + +G E+ ++ ML R +R +
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 233 SIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNH 289
+ + G D+AFE + + K G + +++ L GK KL+ L
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316
Query: 290 HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+ + +I LC ++ EA + + EK L + + L++AL GKV+ A
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376
Query: 350 -FISKRIPGLENLDRSVLSYSS 370
F+ I G D +LSY+S
Sbjct: 377 EFLDDMISGGHLPD--ILSYNS 396
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 150/380 (39%), Gaps = 45/380 (11%)
Query: 2 KGDGGFSPDTCTFNTLIHSHCSAGNLDEAL----------------------KVFENMKN 39
K D + F ++ C + DE+L K F NMK
Sbjct: 68 KHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKK 127
Query: 40 FQVT------------ADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPL 87
+ D +Y+ +I C+ D A K+ D + ++ G +P
Sbjct: 128 IEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKR-------GFEPD 180
Query: 88 AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-LSYMTVIMGHCREGAYENGYELLI 146
+Y + C G+ A RV+ Q++K + ++Y +I +G + +LL
Sbjct: 181 VVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLD 240
Query: 147 WMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKG 206
ML R PD Y+ +++G ++ A E L ++ K+ + ST++ +L LL +G
Sbjct: 241 EMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEG 300
Query: 207 FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIE 263
++ ML + N + I L G D+A +++++ +K +
Sbjct: 301 KWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYD 360
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEK 323
++ LC+ GK+ A + L + H DI N+++ LC+ EA + +L E
Sbjct: 361 PLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEV 420
Query: 324 GLHQELTCLNDLVTALEARG 343
G N L AL + G
Sbjct: 421 GCPPNAGSYNTLFGALWSSG 440
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG PD ++N+++ S C GN DEAL +FE + ++ SY+ L L GD +
Sbjct: 385 GGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIR 444
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-- 122
A + E+ G P +Y + LC G +A +L + + P
Sbjct: 445 ALGMILEMLSN-------GIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTV 497
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
+SY TV++G C+ + E+L M+ LP+ Y LI G
Sbjct: 498 ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 37/267 (13%)
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV-----------------------EI- 159
++M + C+ Y+ L M+ R + PDV EI
Sbjct: 79 NFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEIL 138
Query: 160 ----------YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
Y+ +I GF + D+ A + L++M K + P T++ ++ +G
Sbjct: 139 EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLD 198
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVV 266
+ RV +L N + + T IE G D+A ++++ + +G VV
Sbjct: 199 LALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVV 258
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
+CK G L A + L KN + N ++ L + L +++ KG
Sbjct: 259 NGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCE 318
Query: 327 QELTCLNDLVTALEARGKVEEAAFISK 353
+ L+TAL GK++EA + K
Sbjct: 319 PNPITYSTLITALCRDGKIDEAKNVLK 345
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 175/388 (45%), Gaps = 57/388 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF +T T+NTL+ C G L++++++ + + + + +YSILI + D+A
Sbjct: 168 GFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEA 227
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLS 124
KL D++ K G +P SY + LC+ G+T A ++ +++ ++G + +S
Sbjct: 228 MKLLDDIIAK-------GGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVS 280
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++ C EG ++ YEL+ M R P V Y+ LI + A + L++M
Sbjct: 281 HNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMT 340
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINL---STKSIELLFGHG 241
KS + ++++ I+ARL ++G + V LD+ I + +L + +I LL G
Sbjct: 341 KSGFKVSANSYNPIIARLCKEG----RVDLVVQCLDQMINRRFHLNGGTYNAIALLCERG 396
Query: 242 HRDKAFEIVELLYKK-----------------------------------GFC---VKIE 263
+AF I+E L KK GF
Sbjct: 397 MVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYS 456
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNAVILGLCEINRVLEAFGLCYELV 321
+++ +C+ G L EA L +F + H +D NA+ILGLC+ R+ + + +V
Sbjct: 457 SLIRGMCREGMLDEA--LQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMV 514
Query: 322 EKGLHQELTCLNDLVTALEARGKVEEAA 349
KG N LV AL ++E AA
Sbjct: 515 NKGCMPNEMTYNILVEALAFEEEMELAA 542
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 173/388 (44%), Gaps = 59/388 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ L++ C +G +A++V E M + + D+ASY+ L+ LC+RG+ A
Sbjct: 98 GNKPEVTQATQLLYDLCRSGKARKAVRVMEIMVSSGIIPDAASYTFLVNYLCRRGNVGYA 157
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+L +++ G +Y + + LC +GK ++ ++L +++K+G + ++
Sbjct: 158 MQLVEKMEAN-------GFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVT 210
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I +E + +LL ++ + P++ Y+ L+ G ++ + A++ +++
Sbjct: 211 YSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELP 270
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN------IRQNINLSTKSIELLF 238
+ + P + + +L L +G E+ + M DR+ + N+ +++ SI+
Sbjct: 271 EKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGM-DRDGQAPSVVTYNVLITSLSID--- 326
Query: 239 GHGHRDKAFEIVELLYKKGFCV----------------KIEEVVQ--------------- 267
G ++AF++++ + K GF V +++ VVQ
Sbjct: 327 --GRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGG 384
Query: 268 ------FLCKRGKLPEARKLLLFSLKNHHNVDI-DLCNAVILGLCEINRVLEAFGLCYEL 320
LC+RG + EA L+L L N I D VI LC AF + YE+
Sbjct: 385 TYNAIALLCERGMVKEAF-LILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEM 443
Query: 321 VEKGLHQELTCLNDLVTALEARGKVEEA 348
G + + L+ + G ++EA
Sbjct: 444 TVHGFTPDSYTYSSLIRGMCREGMLDEA 471
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF+PD+ T+++LI C G LDEAL++F ++ +Y+ LI LC+ D +
Sbjct: 447 GFTPDSYTYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMS 506
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLC-----EHGKTRKAERVLRQIMKRGTQ 120
++F + K G P +Y + + L E T E L+ ++ + T
Sbjct: 507 IEIFQMMVNK-------GCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGVLSQSTV 559
Query: 121 DPLS 124
+ LS
Sbjct: 560 ERLS 563
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 175/388 (45%), Gaps = 57/388 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF +T T+NTL+ C G L++++++ + + + + +YSILI + D+A
Sbjct: 43 GFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEA 102
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLS 124
KL D++ K G +P SY + LC+ G+T A ++ +++ ++G + +S
Sbjct: 103 MKLLDDIIAK-------GGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVS 155
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++ C EG ++ YEL+ M R P V Y+ LI + A + L++M
Sbjct: 156 HNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMT 215
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINL---STKSIELLFGHG 241
KS + ++++ I+ARL ++G + V LD+ I + +L + +I LL G
Sbjct: 216 KSGFKVSANSYNPIIARLCKEG----RVDLVVQCLDQMINRRFHLNGGTYNAIALLCERG 271
Query: 242 HRDKAFEIVELLYKK-----------------------------------GFC---VKIE 263
+AF I+E L KK GF
Sbjct: 272 MVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYS 331
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNAVILGLCEINRVLEAFGLCYELV 321
+++ +C+ G L EA L +F + H +D NA+ILGLC+ R+ + + +V
Sbjct: 332 SLIRGMCREGMLDEA--LQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMV 389
Query: 322 EKGLHQELTCLNDLVTALEARGKVEEAA 349
KG N LV AL ++E AA
Sbjct: 390 NKGCMPNEMTYNILVEALAFEEEMELAA 417
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 159/360 (44%), Gaps = 59/360 (16%)
Query: 34 FENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKP 93
E M + + D+ASY+ L+ LC+RG+ A +L +++ G +Y
Sbjct: 1 MEIMVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEAN-------GFPTNTVTYNT 53
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRD 152
+ + LC +GK ++ ++L +++K+G + ++Y +I +E + +LL ++ +
Sbjct: 54 LVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKG 113
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
P++ Y+ L+ G ++ + A++ +++ + + P + + +L L +G E+
Sbjct: 114 GKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAY 173
Query: 213 RVTVMMLDRN------IRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCV------ 260
+ M DR+ + N+ +++ SI+ G ++AF++++ + K GF V
Sbjct: 174 ELMAGM-DRDGQAPSVVTYNVLITSLSID-----GRIEQAFKVLDEMTKSGFKVSANSYN 227
Query: 261 ----------KIEEVVQ---------------------FLCKRGKLPEARKLLLFSLKNH 289
+++ VVQ LC+RG + EA L+L L
Sbjct: 228 PIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAIALLCERGMVKEAF-LILERLGKK 286
Query: 290 HNVDI-DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N I D VI LC AF + YE+ G + + L+ + G ++EA
Sbjct: 287 QNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEA 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF+PD+ T+++LI C G LDEAL++F ++ +Y+ LI LC+ D +
Sbjct: 322 GFTPDSYTYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMS 381
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLC-----EHGKTRKAERVLRQIMKRGTQ 120
++F + K G P +Y + + L E T E L+ ++ + T
Sbjct: 382 IEIFQMMVNK-------GCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGVLSQSTV 434
Query: 121 DPLS 124
+ LS
Sbjct: 435 ERLS 438
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 163/347 (46%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+NT+I +C LDEA + + M +V A+ SY+ +I LC +G ++
Sbjct: 224 GCLPNVVTYNTMISGYCKENKLDEAFGLLKIMGGKRVEANLISYNAVINGLCGQGRMNET 283
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++ +E+ K G P +Y + C+ G +A +L ++ +G + + ++
Sbjct: 284 MEVIEEMSLK-------GLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVT 336
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C+ E+L M R P+ Y L+DGF ++ A + L +M+
Sbjct: 337 YTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMV 396
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S ++P T+++++ G E+ V M++R + ++ + I L +G
Sbjct: 397 DSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELG 456
Query: 245 KAFEI-VELLYKKGF--CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KAF++ +E++ K+ V ++Q LC + KL EA L L + D ++
Sbjct: 457 KAFQMKLEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLM 516
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C + +A L E+++KG ++ + L+ L + + EA
Sbjct: 517 NGYCVEGELSKALDLHDEMMQKGFLPDVVTYSVLINGLNKKARTREA 563
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 135/289 (46%), Gaps = 26/289 (8%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF P T+N L++ C G ++EA+ V ++M + D SYS +I C+ G+
Sbjct: 397 DSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELG 456
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
KA ++ E+ EK I+ P A +Y + Q LC K +A + ++++ RG + D
Sbjct: 457 KAFQMKLEMVEKRIL-------PDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDE 509
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y T++ G+C EG +L M+++ FLPDV Y LI+G +K + A + L K
Sbjct: 510 VTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTYSVLINGLNKKARTREAKKLLLK 569
Query: 183 MLKSSYLPKTSTWHSILAR---------------LLEKGFPHESARVTVMMLDRNIRQNI 227
+ +P T+ +++ KG E+ RV M RN + +
Sbjct: 570 LFYDESVPNDVTYETLIENCSGNEFKSVVGLVKGFCMKGLMDEADRVFETMHQRNFKPDG 629
Query: 228 NLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRG 273
+ I HG+ KA+ + + GF V + +++ L K G
Sbjct: 630 TVYNLIIHGHCRHGNVRKAYNMYTEMVHCGFVSHMVTVIALIKALSKEG 678
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 160/354 (45%), Gaps = 27/354 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G SP+ T+ TL+ C G ++EA KV M + +Y+ L+ C G +
Sbjct: 362 DRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVE 421
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERV-LRQIMKRGTQDP 122
+A + ++ E+ G P SY + C +G+ KA ++ L + KR D
Sbjct: 422 EAVGVLKDMVER-------GLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDA 474
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y ++I G C + ++L ML R PD Y L++G+ + + A++ ++
Sbjct: 475 VTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDLHDE 534
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTV-MMLDRNIRQNINLSTKSIELLFGHG 241
M++ +LP T+ ++ L +K E+ ++ + + D ++ ++ + E L +
Sbjct: 535 MMQKGFLPDVVTYSVLINGLNKKARTREAKKLLLKLFYDESVPNDV-----TYETLIENC 589
Query: 242 HRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
++ +V L+ KGFC+K G + EA ++ + + D + N +I
Sbjct: 590 SGNEFKSVVGLV--KGFCMK-----------GLMDEADRVFETMHQRNFKPDGTVYNLII 636
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
G C V +A+ + E+V G + + L+ AL G +E + + + I
Sbjct: 637 HGHCRHGNVRKAYNMYTEMVHCGFVSHMVTVIALIKALSKEGMNDELSSVMQNI 690
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 149/345 (43%), Gaps = 11/345 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+N +I S G D L M+ + +Y+ +I C+ D+A
Sbjct: 191 SPNIYTYNVMIRGMVSVGRFDSGLHFMNEMETKGCLPNVVTYNTMISGYCKENKLDEAFG 250
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYM 126
L + K + + SY + LC G+ + V+ ++ +G + D ++Y
Sbjct: 251 LLKIMGGKRV-------EANLISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYN 303
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T++ G C++G + LL M + P+V Y LI+G + AME L M
Sbjct: 304 TLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDR 363
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T+ +++ +G +E+ +V M+D ++ + G ++A
Sbjct: 364 GLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEA 423
Query: 247 FEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+++ + ++G V V+ C+ G+L +A ++ L ++ D +++I G
Sbjct: 424 VGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLIQG 483
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC ++ EAF L E++ +GL + L+ G++ +A
Sbjct: 484 LCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKA 528
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+++LI C L EA +F+ M ++ D +Y+ L+ C G+ KA L
Sbjct: 472 PDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDL 531
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLSYMT 127
DE+ +K G P +Y + L + +TR+A+++L ++ + ++Y T
Sbjct: 532 HDEMMQK-------GFLPDVVTYSVLINGLNKKARTREAKKLLLKLFYDESVPNDVTYET 584
Query: 128 VI---------------MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDK 172
+I G C +G + + M +R+F PD +Y+ +I G +
Sbjct: 585 LIENCSGNEFKSVVGLVKGFCMKGLMDEADRVFETMHQRNFKPDGTVYNLIIHGHCRHGN 644
Query: 173 PLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTK 232
A +M+ ++ T +++ L ++G E + V +L+ + LS
Sbjct: 645 VRKAYNMYTEMVHCGFVSHMVTVIALIKALSKEGMNDELSSVMQNILNSCTLNDAELSKA 704
Query: 233 SIELLFGHGHRDKAFEIVELLYKKGF 258
+ + F GH D ++ + G
Sbjct: 705 LVRINFKEGHMDVVLNLLTEMANNGL 730
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 159 IYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH------ESA 212
++D LI + Q + A+ TL + + P +++SIL ++ G PH ++
Sbjct: 121 VFDLLIKSYSQLNLIDNAIHTLHLATRHGFSPGVLSYNSILDSIIRSG-PHSLLSIQQAN 179
Query: 213 RVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFL 269
RV M+ N+ NI I + G D + + KG V ++
Sbjct: 180 RVFCDMVRNNVSPNIYTYNVMIRGMVSVGRFDSGLHFMNEMETKGCLPNVVTYNTMISGY 239
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
CK KL EA LL ++ NAVI GLC R+ E + E+ KGL +
Sbjct: 240 CKENKLDEAFGLLKIMGGKRVEANLISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDC 299
Query: 330 TCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
N LV G +A + + G + L +V++Y++
Sbjct: 300 VTYNTLVNGFCKDGNFHQALVLLHEMSG-KGLSPNVVTYTT 339
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 98/234 (41%), Gaps = 8/234 (3%)
Query: 123 LSYMTVIMGHCREGAY-----ENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
LSY +++ R G + + + M+R + P++ Y+ +I G + + +
Sbjct: 155 LSYNSILDSIIRSGPHSLLSIQQANRVFCDMVRNNVSPNIYTYNVMIRGMVSVGRFDSGL 214
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
+ +M LP T++++++ ++ E+ + +M + + N+ I L
Sbjct: 215 HFMNEMETKGCLPNVVTYNTMISGYCKENKLDEAFGLLKIMGGKRVEANLISYNAVINGL 274
Query: 238 FGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
G G ++ E++E + KG CV +V CK G +A LL + ++
Sbjct: 275 CGQGRMNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNV 334
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I G+C++ + A + + ++GL LV +G + EA
Sbjct: 335 VTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEA 388
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 170/371 (45%), Gaps = 12/371 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D D T+ I S C G AL++ NM +++ +Y ++ + GD D
Sbjct: 139 DKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDND 198
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDP 122
+A +LFDE+ E LC P ++ + LC+ G ++ER+ +++KRG +
Sbjct: 199 RARELFDEMLE--CCLC-----PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNL 251
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++ I G C+EG+ + LL + R PDV Y+ +I G +K + + A E L K
Sbjct: 252 FTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHK 311
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M+ + P T++SI+ +KG ++ R+ + + + + + G
Sbjct: 312 MVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGD 371
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
D+A + + KG + +++ LC++G + A +L+ + DI N
Sbjct: 372 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 431
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
+I GLC++ + +A L + + KG ++ N LV + K++ A + R+ +
Sbjct: 432 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWS-Q 490
Query: 360 NLDRSVLSYSS 370
+ V++Y++
Sbjct: 491 GMTPDVITYNT 501
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 159/388 (40%), Gaps = 47/388 (12%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+GGF P+ T+N++I +C G + +A ++ ++ D +Y L+ CQ GD D
Sbjct: 314 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 373
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+A +F + K G +P Y + + LC+ G A +++ ++ ++G + D
Sbjct: 374 QAMAVFKDGLGK-------GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDI 426
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I G C+ G + L+ + + +PD+ Y+ L+DG+ ++ K A+E + +
Sbjct: 427 WTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR 486
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M P T++++L L + E + M ++ NI IE L
Sbjct: 487 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 546
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL----------------- 282
++A +++ + KG V ++ CK G L A L
Sbjct: 547 VNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYN 606
Query: 283 -----------------LFSLKNHHNVDID--LCNAVILGLCEINRVLEAFGLCYELVEK 323
LFS + D D +I G C+ V + + E +EK
Sbjct: 607 IIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK 666
Query: 324 GLHQELTCLNDLVTALEARGKVEEAAFI 351
G LT ++ L KV+EA I
Sbjct: 667 GFIPSLTTFGRVLNCLCVEHKVQEAVGI 694
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 11/345 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD TFN L+H+ C G + E+ ++F+ + V + +++I I+ LC+ G D+A +L
Sbjct: 214 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 273
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
+ + G +P +Y + LC + +AE L +++ G + + +Y +
Sbjct: 274 LG-------CVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 326
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G+C++G + +L + + F PD Y L++GF Q P AM + L
Sbjct: 327 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 386
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P +++++ L ++G + ++ M ++ + +I I L G A
Sbjct: 387 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDAN 446
Query: 248 EIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ KG I +V C++ KL A +L+ D+ N ++ GL
Sbjct: 447 HLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGL 506
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
C+ + E + + EKG + N ++ +L KV EA
Sbjct: 507 CKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAV 551
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 163/355 (45%), Gaps = 12/355 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G FS + + T++ G+ D A ++F+ M + D +++ L+ LC++G +
Sbjct: 176 GCFS-NAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLE 234
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
+E+LFD++ ++ G P ++ Q LC+ G +A R+L + + G + D +
Sbjct: 235 SERLFDKVLKR-------GVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVV 287
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y TVI G CR+ E L M+ F P+ Y+ +IDG+ +K + A L+
Sbjct: 288 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDA 347
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + P T+ S++ + G P ++ V L + +R +I + I+ L G
Sbjct: 348 VFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLI 407
Query: 244 DKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
A +++ + +KG I ++ LCK G L +A L+ ++ DI N +
Sbjct: 408 LPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTL 467
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+ G C ++ A L + +G+ ++ N L+ L K EE I K +
Sbjct: 468 VDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 522
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 158/368 (42%), Gaps = 11/368 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ TFN I C G+LD A+++ + + D +Y+ +I LC++ +A
Sbjct: 246 GVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEA 305
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
E+ ++ G +P +Y I C+ G A R+L+ + +G + D +
Sbjct: 306 EECLHKMVNG-------GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFT 358
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ G C++G + + L + P + +Y+ LI G Q+ L A++ + +M
Sbjct: 359 YCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMA 418
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ I+ L + G ++ + + + +I ++ D
Sbjct: 419 EKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLD 478
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A E+V ++ +G + ++ LCK K E ++ + +I N +I
Sbjct: 479 SAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTII 538
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL 361
LC +V EA L E+ KGL ++ L+T G ++ A + + + ++
Sbjct: 539 ESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDV 598
Query: 362 DRSVLSYS 369
+ +Y+
Sbjct: 599 SHTTATYN 606
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 7/188 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ T+NT+I S C++ ++EA+ + MK+ +T D S+ LI C+ GD D A
Sbjct: 526 GCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGA 585
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF + EK+ + A+Y I E + A R+ ++ K G D +
Sbjct: 586 YGLFRGM-EKQ-----YDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYT 639
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G GY+ L+ + + F+P + + +++ + K A+ + M+
Sbjct: 640 YRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMV 699
Query: 185 KSSYLPKT 192
+ +P T
Sbjct: 700 QKDIVPDT 707
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 44/255 (17%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NTL+ +C LD A+++ M + +T D +Y+ L+ LC+ ++
Sbjct: 456 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 515
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++F + EK G P +Y I + LC K +A +L ++ +G T D +S
Sbjct: 516 MEIFKAMTEK-------GCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVS 568
Query: 125 YMTVIMGHCREGAYENGYELL----------------------------IWMLRRDFL-- 154
+ T+I G C+ G + Y L + M R F
Sbjct: 569 FGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEM 628
Query: 155 ------PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP 208
PD Y LIDGF + + L + ++ ++P +T+ +L L +
Sbjct: 629 KKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKV 688
Query: 209 HESARVTVMMLDRNI 223
E+ + +M+ ++I
Sbjct: 689 QEAVGIIHLMVQKDI 703
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 162/350 (46%), Gaps = 17/350 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD TFN LI+ C G + A VF + ++ +++ LI+ LC +G +A
Sbjct: 114 GINPDFFTFNILINCFCQLGLIPFAFSVFAKILRMGYHPNTITFTTLIKGLCLKGQIHQA 173
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF +V G Q Y + LC+ G+TR A +LR++ Q + +
Sbjct: 174 L-----LFHDNVV--AMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVM 226
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C++ + ++L M+ + P+V Y LI GF + A++ KM+
Sbjct: 227 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 286
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---G 241
+ P T++ ++ + G E V MM+ + I+ N+ L+ G+
Sbjct: 287 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV---VTYCSLMDGYCLVK 343
Query: 242 HRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+KA I+ + ++G I+ ++ CK K+ EA L H D+ N
Sbjct: 344 EVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYN 403
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++I GLC++ ++ A L E+ ++G+ ++ + ++ AL +V++A
Sbjct: 404 SLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 453
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 154/333 (46%), Gaps = 17/333 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ ++T+I C ++++A ++ M + ++ + +YS LI G A L
Sbjct: 222 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 281
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+++ + I +P ++ + C+ GK ++ + V +MK+G + + ++Y +
Sbjct: 282 FNKMILENI-------KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 334
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C +L M +R PD++ Y+ LIDGF + K AM ++M
Sbjct: 335 LMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH 394
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+P T++S++ L + G + ++ M DR + +I + ++ L + DKA
Sbjct: 395 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 454
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ L +G + ++ LCK G+L +A + L +N+ ++ +I G
Sbjct: 455 ALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGF 514
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVT 337
C EA L ++ ++ +C+ D VT
Sbjct: 515 CNKGLFDEALTLLSKM------KDNSCIPDAVT 541
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 11/281 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP+ T++ LI + G L +A+ +F M + D +++IL+ C+ G +
Sbjct: 254 GISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEG 313
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ +F + ++ G +P +Y + C + KA+ +L + +RG D S
Sbjct: 314 KTVFAMMMKQ-------GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 366
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ + L M + +PDV Y+ LIDG + K A++ +++M
Sbjct: 367 YNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 426
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+ SIL L + ++ + + D+ IR N+ T I+ L G +
Sbjct: 427 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLE 486
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
A I E L KG+ + + ++ C +G EA LL
Sbjct: 487 DAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALTLL 527
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD ++N LI C +DEA+ +F+ M + + D +Y+ LI LC+ G A
Sbjct: 359 GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYA 418
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
KL DE+ ++ G P +Y I LC++ + KA +L ++ +G + + +
Sbjct: 419 LKLVDEMHDR-------GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYT 471
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G E+ + + +L + + V Y +I GF K A+ L KM
Sbjct: 472 YTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMK 531
Query: 185 KSSYLPKTSTWHSILARLLEK 205
+S +P T+ I+ L +K
Sbjct: 532 DNSCIPDAVTYEIIIRSLFDK 552
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 8/249 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+ +L+ +C +++A + M V D SY+ILI C+ D+A
Sbjct: 324 GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEA 383
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF E+ K I+ P +Y + LC+ GK A +++ ++ RG D ++
Sbjct: 384 MNLFKEMHHKHII-------PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIIT 436
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ C+ + LL + + P++ Y LIDG + + A E +L
Sbjct: 437 YSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 496
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y +T+ ++ KG E+ + M D + + I LF D
Sbjct: 497 VKGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNSCIPDAVTYEIIIRSLFDKDEND 556
Query: 245 KAFEIVELL 253
KA ++ E++
Sbjct: 557 KAEKLREMI 565
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/364 (19%), Positives = 148/364 (40%), Gaps = 41/364 (11%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P FN ++ S + + L + + M+ + D +++ILI CQ G A
Sbjct: 81 TPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPDFFTFNILINCFCQLGLIPFAFS 140
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
+F ++ + G P ++ + + LC G+ +A ++ G Q D + Y
Sbjct: 141 VFAKIL-------RMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYG 193
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ G +LL + P+V +Y +IDG + A + +M+
Sbjct: 194 TLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK 253
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T+ ++++ G + + + ++ I +NI + +L
Sbjct: 254 GISPNVVTYSALISGFFTVG----QLKDAIDLFNKMILENIKPDVYTFNIL--------- 300
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
V CK GK+ E + + +K ++ +++ G C
Sbjct: 301 -------------------VDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 341
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVL 366
+ V +A + Y + ++G++ ++ N L+ KV+EA + K + +++ V+
Sbjct: 342 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHH-KHIIPDVV 400
Query: 367 SYSS 370
+Y+S
Sbjct: 401 TYNS 404
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 170/387 (43%), Gaps = 47/387 (12%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
+KG G PD +N +I C G + EA ++ M+ + V D+ Y+ +I C+ G
Sbjct: 303 LKGKG-LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLG 361
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+ A KLFDE+ K+IV P +Y + +C+ GK +A + +++ +G +
Sbjct: 362 NVSAACKLFDEMRRKKIV-------PDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLE 414
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D ++Y +I G+C+ G + + + M+++ P+V Y L DG + + +A E
Sbjct: 415 PDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANEL 474
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L +M + P T+++I+ L + G ++ ++ M + T ++
Sbjct: 475 LHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCK 534
Query: 240 HGHRDKAFEIVELLYKK--------------GFCVK-----IEEVVQFLCKRGKLPEARK 280
G KA E++ ++ K GFC+ E +++++ ++G +P A
Sbjct: 535 MGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATT 594
Query: 281 ----LLLFSLKNHHNV---------------DIDLCNAVILGLCEINRVLEAFGLCYELV 321
+ + +KN+ D + N +I G C+ + EA+ L E+V
Sbjct: 595 FNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMV 654
Query: 322 EKGLHQELTCLNDLVTALEARGKVEEA 348
EKG + L+ R K EA
Sbjct: 655 EKGYSVTAATYDALIRGFYKRKKFVEA 681
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 151/347 (43%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T + N ++H C G + EA + M + D SY +++ C+ G+ DK
Sbjct: 237 GVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKV 296
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
KL DEL K G +P Y I LC++G+ +AE++LR + K G D +
Sbjct: 297 LKLVDELKGK-------GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVV 349
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y TVI G C+ G +L M R+ +PD+ Y +I G + K + A E +ML
Sbjct: 350 YTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEML 409
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+ +++ + G E+ V M+ + + N+ T + L +G D
Sbjct: 410 VKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEID 469
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A E++ + +KG + +V LCK G + + KL+ D ++
Sbjct: 470 VANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLM 529
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C++ + +A L ++ K L L N L+ G +E+
Sbjct: 530 DAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDG 576
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GF PDT T+ TL+ ++C G + +A ++ M N ++ ++++L+ C G +
Sbjct: 516 AGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLED 575
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
E+L + + EK G P A ++ + + C R + + + RG D
Sbjct: 576 GERLIEWMLEK-------GIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSN 628
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I GHC+ + + L M+ + + YD LI GF ++ K + A + E+M
Sbjct: 629 TYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688
Query: 184 LK 185
K
Sbjct: 689 RK 690
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSASYSILIRNLCQRGD 61
D G PD+ T+N LI HC A N+ EA + + M K + VTA A+Y LIR +R
Sbjct: 620 DRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTA--ATYDALIRGFYKRKK 677
Query: 62 YDKAEKLFDEL 72
+ +A KLF+E+
Sbjct: 678 FVEARKLFEEM 688
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 162/360 (45%), Gaps = 16/360 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+NTL++++C G + EA + + M + +Y+ LI LC+ G Y++A
Sbjct: 268 GVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERA 327
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+++ DE+ + LC P AA++ P+ C +AERV ++++RG D +S
Sbjct: 328 KRVLDEML--GVGLC-----PNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 380
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +++ R G M +PD IY LI+G+ + D A++ +M+
Sbjct: 381 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 440
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ + T++++L L ++ + M++R + + T I G+
Sbjct: 441 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 500
Query: 245 KA---FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA FE + L K V ++ CK G++ +A++L + + +I
Sbjct: 501 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 560
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA-----AFISKRIP 356
G C + V EAF L E+ EKG+ L N ++ G + +A IS+ +P
Sbjct: 561 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 620
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 8/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T TLIH +C GN+ +AL +FE M + D +Y+ L+ C+ G+ +KA
Sbjct: 478 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKA 537
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
++L+ ++ +EI P S+ + C G +A R+ ++ ++G + L +
Sbjct: 538 KELWYDMISREIF-------PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 590
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T+I G+ R G + L M+ PD Y+ LI+ F++++ A + M
Sbjct: 591 CNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNME 650
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ LP T+++IL G E+ V M+D+ I + + T I +
Sbjct: 651 ERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMK 710
Query: 245 KAFEIVELLYKKGF 258
+AF + + + ++GF
Sbjct: 711 EAFRVHDEMLQRGF 724
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 19/351 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +F++++ G L AL FE MK + D+ Y+ILI C+ D A
Sbjct: 373 GVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGA 432
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
K+ +E+ E+ V+ +Y + LC A+ + +++++RG D +
Sbjct: 433 LKMRNEMVERGCVMD-------VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYT 485
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T+I G+C++G L M R PDV Y+ L+DGF + + A E M+
Sbjct: 486 LTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMI 545
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P ++ ++ G E+ R+ M ++ I+ + I+ G+
Sbjct: 546 SREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLS 605
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHN----VDIDLC 297
KA + + + +G C+ ++ K A F + N ++
Sbjct: 606 KANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRA----FFLINNMEERGLLPNLVTY 661
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
NA++ G R+ EA + +++++KG++ + + L+ ++ ++EA
Sbjct: 662 NAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEA 712
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+NTL+ C G +++A +++ +M + ++ S+SILI C G +A +L
Sbjct: 516 PDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRL 575
Query: 69 FDELFEKEI----VLCKF------------------------GSQPLAASYKPIFQYLCE 100
+DE+ EK I V C G P +Y + +
Sbjct: 576 WDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVK 635
Query: 101 HGKTRKAERVLRQIMKRGT-QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
+A ++ + +RG + ++Y ++ G R G + +L M+ + PD
Sbjct: 636 EENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKST 695
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
Y LI+G++ KD A ++ML+ ++P
Sbjct: 696 YTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 726
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 162/368 (44%), Gaps = 12/368 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ TFNT+I+ C G + +AL +N+ D +Y LI L + G A
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L E+ EK V QP Y + LC+ G A + QI +RG D ++
Sbjct: 180 LHLLQEM-EKSSV------QPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C G ++ +LL M+R + PD ++ LID ++ + L A L M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T+++++ + HE+ + M+ R + ++ I+ D
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + L K I ++ LC G++ +KLL + D+ N +I
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL 361
LC+ R+LEA G+ +++KG+ + N ++ R V A I R+ L
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK-SGL 471
Query: 362 DRSVLSYS 369
+ +L+Y+
Sbjct: 472 EPDILNYN 479
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 163/359 (45%), Gaps = 15/359 (4%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ G D T+N+LI CS G E ++ M V D +++ILI LC+ G
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
+A+ + ++ K G +P +Y + + C +A + +++KRG + D
Sbjct: 282 LEAQGVL-------AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
L+Y +I G+C+ + L + ++ +P + Y+ LIDG + + L+
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M S+ P T++ ++ L ++G E+ V VMM+ + ++ NI ++
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDL 296
+ + A +I + K G + ++ CK + EA ++LF H N+ DI
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA--IVLFKEMRHKNLIPDIAS 512
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
N++I GLC + R+ L E+ + G ++ N L+ A ++A + ++I
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 136/324 (41%), Gaps = 42/324 (12%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M G PD T+N L+ +CS N+ EA ++F M + D +Y++LI C+
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+A LF EL K +V P ASY + LC G+ +++L + M Q
Sbjct: 350 MVDEAMVLFKELCNKNLV-------PTIASYNSLIDGLCNSGRISHVKKLLDE-MHGSAQ 401
Query: 121 DP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
P ++Y +I C+EG +L+ M+++ P++ Y+ ++DG+ ++ +A +
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
+M+KS P ++ ++ + E+ + M +N+ +I
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI----------- 510
Query: 239 GHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
++ LC G++P ++LL + + D+ N
Sbjct: 511 ---------------------ASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549
Query: 299 AVILGLCEINRVLEAFGLCYELVE 322
++ C+ +A L ++VE
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVE 573
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 156/361 (43%), Gaps = 22/361 (6%)
Query: 19 HSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIV 78
H +C N+D+A+ F M ++ + L+ + + G Y A LF +L K
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK--- 84
Query: 79 LCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGA 137
G P A++ + T A +L I+K G Q L ++ T+I G C G
Sbjct: 85 ----GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140
Query: 138 YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHS 197
+ +L + +L D Y LI+G + + A+ L++M KSS P + +
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 198 ILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK-- 255
++ L + GF ++ + + +R I + + L+ G + E+ +LL K
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLD---AVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 256 ------KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINR 309
+ I ++ LCK G++ EA+ +L K DI NA++ G C
Sbjct: 258 RENVDPDDYTFNI--LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 310 VLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
V EA L +V++GL ++ N L+ V+EA + K + +NL ++ SY+
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN-KNLVPTIASYN 374
Query: 370 S 370
S
Sbjct: 375 S 375
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 161/369 (43%), Gaps = 18/369 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +N LI +C +DEA+ +F+ + N + ASY+ LI LC G
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+KL DE+ P +Y + LC+ G+ +A VL +MK+G + + ++
Sbjct: 390 KKLLDEMHGS-------AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G+C ++ M++ PD+ Y+ LI+G+ + + A+ ++M
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502
Query: 185 KSSYLPKTSTWHSILARLLEKG-FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ +P ++++S++ L G PH + M D ++ ++
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLD-EMCDSGQSPDVITYNILLDAFCKTQPF 561
Query: 244 DKAF----EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
DKA +IVE ++ + +V LCK KL A L L + + ++
Sbjct: 562 DKAISLFRQIVEGIWPDFY--TNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI--PG 357
+I LC+ EA L ++ + + ++ L R + ++A + + + G
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Query: 358 LENLDRSVL 366
L N+++ ++
Sbjct: 680 LVNIEKRLM 688
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 162/368 (44%), Gaps = 12/368 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ TFNT+I+ C G + +AL +N+ D +Y LI L + G A
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L E+ EK V QP Y + LC+ G A + QI +RG D ++
Sbjct: 180 LHLLQEM-EKSSV------QPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C G ++ +LL M+R + PD ++ LID ++ + L A L M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T+++++ + HE+ + M+ R + ++ I+ D
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + L K I ++ LC G++ +KLL + D+ N +I
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL 361
LC+ R+LEA G+ +++KG+ + N ++ R V A I R+ L
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK-SGL 471
Query: 362 DRSVLSYS 369
+ +L+Y+
Sbjct: 472 EPDILNYN 479
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 163/359 (45%), Gaps = 15/359 (4%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ G D T+N+LI CS G E ++ M V D +++ILI LC+ G
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
+A+ + ++ K G +P +Y + + C +A + +++KRG + D
Sbjct: 282 LEAQGVL-------AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
L+Y +I G+C+ + L + ++ +P + Y+ LIDG + + L+
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M S+ P T++ ++ L ++G E+ V VMM+ + ++ NI ++
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDL 296
+ + A +I + K G + ++ CK + EA ++LF H N+ DI
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA--IVLFKEMRHKNLIPDIAS 512
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
N++I GLC + R+ L E+ + G ++ N L+ A ++A + ++I
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 136/324 (41%), Gaps = 42/324 (12%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M G PD T+N L+ +CS N+ EA ++F M + D +Y++LI C+
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+A LF EL K +V P ASY + LC G+ +++L + M Q
Sbjct: 350 MVDEAMVLFKELCNKNLV-------PTIASYNSLIDGLCNSGRISHVKKLLDE-MHGSAQ 401
Query: 121 DP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
P ++Y +I C+EG +L+ M+++ P++ Y+ ++DG+ ++ +A +
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
+M+KS P ++ ++ + E+ + M +N+ +I
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI----------- 510
Query: 239 GHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
++ LC G++P ++LL + + D+ N
Sbjct: 511 ---------------------ASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549
Query: 299 AVILGLCEINRVLEAFGLCYELVE 322
++ C+ +A L ++VE
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVE 573
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 165/377 (43%), Gaps = 22/377 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +N LI +C +DEA+ +F+ + N + ASY+ LI LC G
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+KL DE+ P +Y + LC+ G+ +A VL +MK+G + + ++
Sbjct: 390 KKLLDEMHGS-------AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G+C ++ M++ PD+ Y+ LI+G+ + + A+ ++M
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502
Query: 185 KSSYLPKTSTWHSILARLLEKG-FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ +P ++++S++ L G PH + M D ++ ++
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLD-EMCDSGQSPDVITYNILLDAFCKTQPF 561
Query: 244 DKAF----EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
DKA +IVE ++ + +V LCK KL A L L + + ++
Sbjct: 562 DKAISLFRQIVEGIWPDFY--TNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI--PG 357
+I LC+ EA L ++ + + ++ L R + ++A + + + G
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Query: 358 LENLDR----SVLSYSS 370
L N+++ S+L Y+S
Sbjct: 680 LVNIEKSYFSSILDYAS 696
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 156/361 (43%), Gaps = 22/361 (6%)
Query: 19 HSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIV 78
H +C N+D+A+ F M ++ + L+ + + G Y A LF +L K
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK--- 84
Query: 79 LCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGA 137
G P A++ + T A +L I+K G Q L ++ T+I G C G
Sbjct: 85 ----GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140
Query: 138 YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHS 197
+ +L + +L D Y LI+G + + A+ L++M KSS P + +
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 198 ILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK-- 255
++ L + GF ++ + + +R I + + L+ G + E+ +LL K
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLD---AVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 256 ------KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINR 309
+ I ++ LCK G++ EA+ +L K DI NA++ G C
Sbjct: 258 RENVDPDDYTFNI--LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 310 VLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
V EA L +V++GL ++ N L+ V+EA + K + +NL ++ SY+
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN-KNLVPTIASYN 374
Query: 370 S 370
S
Sbjct: 375 S 375
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D+ T+ +LI +C L +A KVFE M + SY+ LI C+ G D+A
Sbjct: 220 GFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEA 279
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+LF ++ E G P +Y + CE GK +A + ++++ G + +
Sbjct: 280 LELFFQMKED-------GCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYT 332
Query: 126 MTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
TV++ + C+ G + G E+L ML + + V ++ LIDG+ ++ A+ L+ M
Sbjct: 333 YTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK 392
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P + T++ ++ K + + M + + N+ I L D
Sbjct: 393 LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVD 452
Query: 245 KAFEIVELLYKKGFCVKIEEVVQF---LCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A+ + L+ K GF F LCK GK+ +A ++ + H + L A+I
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALI 512
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C+ + +A L ++ +G N L+ L GKVE+A
Sbjct: 513 DGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDA 559
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 158/386 (40%), Gaps = 49/386 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD TF I C G +++A +VFE++K A+ Y+ LI C+ + A
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524
Query: 66 EKLFDEL-----FEKEI-----------------------VLCKFGSQPLAASYKPIFQY 97
LF + F I V+ KF ++P +Y + +
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEE 584
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
+ +A L Q++ G Q + ++Y I +CR+G E+++ + L D
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
IYD L++ + + A L +M + P T+ +L L+ + + E
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEG----- 699
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CV----KIEEVVQFL 269
M LD N NI++ +I + FEI+ +L++K CV ++++ L
Sbjct: 700 MGLDLN-STNISVDNANI-------WKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGL 751
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
CK L A +L ++ + ++ N+++ C++ EA L ++E L
Sbjct: 752 CKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHL 811
Query: 330 TCLNDLVTALEARGKVEEAAFISKRI 355
LV L +G E+A I + +
Sbjct: 812 ESYKLLVCGLFEQGNQEKAEEIFRSL 837
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 13/257 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK DG F PD T+ L+ + C G EALK FE M + + +Y++LI C+ G
Sbjct: 286 MKEDGCF-PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVG 344
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGT 119
D+ ++ + EK +V L Y C+ G A VL + + +
Sbjct: 345 KMDEGMEMLSTMLEKGLVSSVVPFNALIDGY-------CKRGMMEDAICVLDSMKLNKVC 397
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ +Y +I G CR+ + + LL M P++ Y+ LI G + A
Sbjct: 398 PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL 457
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
M+K ++P T+ + + L + G ++ +V + +++ N L T I+ G
Sbjct: 458 HHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALID---G 514
Query: 240 HGHRDKAFEIVELLYKK 256
+ +K F LL+K+
Sbjct: 515 YCKAEK-FSDAHLLFKR 530
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 142/340 (41%), Gaps = 15/340 (4%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
N++I S S+ EA V + + + + SY+ L L + G D+ LF ++
Sbjct: 127 NSMIKSCVSS---HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLN 183
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHC 133
G +P S+ + C+ G A+ +MK G D +Y ++I+G+C
Sbjct: 184 D-------GVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYC 236
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTS 193
+ + Y++ M + L + Y LI GF + K A+E +M + P
Sbjct: 237 KIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVP 296
Query: 194 TWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELL 253
T+ ++A E G E+ + M++ I N+ T I+ G D+ E++ +
Sbjct: 297 TYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTM 356
Query: 254 YKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRV 310
+KG V ++ CKRG + +A +L N + N +I G C +
Sbjct: 357 LEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSM 416
Query: 311 LEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAF 350
A L ++ E L L N L+ L + +V ++A+
Sbjct: 417 DRAMALLNKMYENKLSPNLVTYNTLIHGL-CKARVVDSAW 455
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 29/281 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G FN LI +C G +++A+ V ++MK +V +S +Y+ LI C++ D+A
Sbjct: 360 GLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRA 419
Query: 66 EKLFDELFEKEIV------------LCKF----------------GSQPLAASYKPIFQY 97
L ++++E ++ LCK G P ++
Sbjct: 420 MALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDC 479
Query: 98 LCEHGKTRKAERVLRQIM-KRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC+ GK +A +V + K + Y +I G+C+ + + + L ML P+
Sbjct: 480 LCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPN 539
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
++ L+DG ++ K AM ++ M K P T+ ++ +L + +
Sbjct: 540 SITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLD 599
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG 257
M+ + N+ T I+ G +A E+V + ++G
Sbjct: 600 QMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG 640
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 153/379 (40%), Gaps = 47/379 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P++ TFN L+ G +++A+ + + M F +Y+ILI + + D+D+A
Sbjct: 535 GCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRA 594
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
D++ G QP +Y + C G+ +AE ++ +I + G D
Sbjct: 595 NMFLDQMISS-------GCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFI 647
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL----QKDKPLLAMETL 180
Y ++ + G ++ + +LI M P + Y L+ + K+ L + +
Sbjct: 648 YDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNST 707
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+ ++ + K + + I+ L EK M+++ N+N +K I+ L
Sbjct: 708 NISVDNANIWKIADF-EIITMLFEK------------MVEQGCVPNVNTYSKLIKGLCKV 754
Query: 241 GHRDKAFEIVELLYKKGFCVK---IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
H AF + + + G ++ CK G EA +LL ++ +H ++
Sbjct: 755 EHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESY 814
Query: 298 NAVILGLC---------EINRVLEAFGLCYE----------LVEKGLHQELTCLNDLVTA 338
++ GL EI R L + G Y+ LV KG E + L D++
Sbjct: 815 KLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEK 874
Query: 339 LEARGKVEEAAFISKRIPG 357
R + +S+ + G
Sbjct: 875 TGCRLHSDTHTMLSQELNG 893
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 11/321 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+N LI C G L +A+ +F M + + D ++SIL+ C+ G+ +A+ +
Sbjct: 366 PDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNV 425
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
+ ++ I +P +Y + C + KAE + + RG T + SY
Sbjct: 426 LAMMMKQSI-------KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNI 478
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ + +L M + PDV Y LIDG + + A+E +++M
Sbjct: 479 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRG 538
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T++SIL L +K ++ + + + IR ++N T ++ L G + A
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ E L KG+ + + ++Q C +G EA LL +N D +IL L
Sbjct: 599 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 658
Query: 305 CEINRVLEAFGLCYELVEKGL 325
E + A L E++ +GL
Sbjct: 659 FEKDENDMAEKLLREMIMRGL 679
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 146/348 (41%), Gaps = 11/348 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G+ PDT T T I C G + +AL + + D SY LI LC+ G+
Sbjct: 257 NGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKA 316
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA-ERVLRQIMKRGTQDPL 123
A +L K + QP Y I +C+ A + ++ KR D
Sbjct: 317 ALELLRRNDGKLV-------QPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVF 369
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I G C G ++ +L M ++ +PDV + L+DGF + A L M
Sbjct: 370 TYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMM 429
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+K S P T+ S++ +++ + M R + N+ I
Sbjct: 430 MKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMV 489
Query: 244 DKAFEIV-ELLYKKGF--CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
D+A ++ E+ +K+ F + ++ LCK G++ A +L+ DI N++
Sbjct: 490 DEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSI 549
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ LC+ + V +A L +L +G+ ++ LV L GK+E+A
Sbjct: 550 LDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDA 597
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + + ++N +I+ C +DEA+K+F+ M + Q+ D +YS LI LC+ G A
Sbjct: 468 GVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYA 527
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L DE+ + G QP +Y I LC+ KA +L ++ +G + D +
Sbjct: 528 LELVDEMHYR-------GQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNT 580
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G C+ G E+ ++ +L + + DV Y +I GF K A+ L KM
Sbjct: 581 YTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640
Query: 185 KSSYLPKTSTWHSILARLLEK 205
++ +P T+ I+ L EK
Sbjct: 641 ENGCIPDAKTYEIIILSLFEK 661
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N+++ + C ++D+A+ + +K + D +Y+IL++ LCQ G + A
Sbjct: 538 GQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDA 597
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
K+F++L K G +Y + Q C+ G +A +L ++ + G D +
Sbjct: 598 RKVFEDLLVK-------GYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKT 650
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRR 151
Y +I+ + + +LL M+ R
Sbjct: 651 YEIIILSLFEKDENDMAEKLLREMIMR 677
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 11/345 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+ D +NT+I S C + EA +++ M ++ ++S LI C G + A +
Sbjct: 191 NTDVVMYNTIIDSLCKEKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFR 250
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
LF+E+ K I P ++ + LC+ GK ++A+ VL ++K+G + D +++
Sbjct: 251 LFNEMVLKNI-------NPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHT 303
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+++ G+C L M++R +P+V Y +I+G + AM+ ++M
Sbjct: 304 SLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSK 363
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
+P T T+ S++ L + G + + M DR N+ + + L + H DKA
Sbjct: 364 KIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLHALCKNRHVDKA 423
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
E+V+ L + + ++ LCK+G+L +A+ + +N+ + N +I G
Sbjct: 424 IELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKGYNLTVWTYNIMING 483
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC + EA L ++ + G +V AL + E+A
Sbjct: 484 LCLEGLLDEALALLSKMEDNGCIPNAVTFEIIVHALFKNDENEKA 528
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 153/366 (41%), Gaps = 43/366 (11%)
Query: 8 SPDTCTFNTLIHSHCSAGN--LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
+P FN ++ S + N A+ +F ++ +T +++I+I C + + A
Sbjct: 49 TPSIIEFNKILGSLVKSNNKHYPTAISLFYQLELNGITPSIVTFNIVINCYCHLSEMNFA 108
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L ++ K G P + + + +C +GK ++A ++ G D +S
Sbjct: 109 FSLLGKIL-------KVGFHPDIVTLTTLIKGMCLNGKVKEALHFHDHVISLGFHLDQVS 161
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C+ G ++L + + DV +Y+ +ID ++ A E +M+
Sbjct: 162 YGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDSLCKEKLVTEAYELYSEMI 221
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ S++ G ++ R+ M+ +NI N+
Sbjct: 222 TKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNV----------------- 264
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
F I+ V LCK GK+ EA+ +L +K DI +++ G
Sbjct: 265 YTFNIL---------------VDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGY 309
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRS 364
C +N V +A L +V++G+ + C + ++ L ++EA K + + + +
Sbjct: 310 CLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNT 369
Query: 365 VLSYSS 370
V +YSS
Sbjct: 370 V-TYSS 374
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 111/254 (43%), Gaps = 8/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T +L+ +C +++A +F M V + YS++I LC+ D+A
Sbjct: 294 GVKPDIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEA 353
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
F E+ K+I+ P +Y + LC+ G+ A +L ++ RG + ++
Sbjct: 354 MDFFKEMQSKKII-------PNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVIT 406
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +++ C+ + EL+ + RD P++ Y+ LIDG ++ + A + +
Sbjct: 407 FSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLF 466
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y T++ ++ L +G E+ + M D N + LF + +
Sbjct: 467 IKGYNLTVWTYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFEIIVHALFKNDENE 526
Query: 245 KAFEIVELLYKKGF 258
KA +++ + +G
Sbjct: 527 KAEKLLREMIARGL 540
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 28/143 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G + TF++L+H+ C ++D+A+++ + +K+ + + +Y+ILI LC++G
Sbjct: 397 DRGQPANVITFSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLK 456
Query: 64 KAEKLFDELFEKEIVLCKF----------------------------GSQPLAASYKPIF 95
A+ +F +LF K L + G P A +++ I
Sbjct: 457 DAQVIFQDLFIKGYNLTVWTYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFEIIV 516
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
L ++ + KAE++LR+++ RG
Sbjct: 517 HALFKNDENEKAEKLLREMIARG 539
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 40/320 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD T++ LI C G L++A+ +F M + D +++IL+ C+ G +
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ +FD ++ K G +P +Y + C + KA+ + + + G D S
Sbjct: 315 KTVFD-------MMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ ++ L M R++ +PDV Y LIDG + + A++ +++M
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T++SIL L + ++ + + D+ I+ N+ T SI
Sbjct: 428 DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP--NMYTYSI---------- 475
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+++ LC+ GKL +ARK+ L HN+++D +I G
Sbjct: 476 --------------------LIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGF 515
Query: 305 CEINRVLEAFGLCYELVEKG 324
C EA L ++ + G
Sbjct: 516 CVEGLFNEALALLSKMEDNG 535
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 149/347 (42%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TLI C G + +A + + D SY LI LC+ G+ A
Sbjct: 150 GYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L + + +V QP Y I +C+ +A + +++ +G + D ++
Sbjct: 210 LDLLQRV-DGNLV------QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G + +L M+ + PDV ++ L++ F + K + M+
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T++S++ +++ + M + +I + I D
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + +++K V ++ L K G++ A +L+ I N+++
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSIL 442
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+I++V +A L +L +KG+ + + L+ L GK+E+A
Sbjct: 443 DALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDA 489
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 152/349 (43%), Gaps = 15/349 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ N LI+ C G + A VF + D+ +++ LI+ LC +G +A
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA 174
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF ++V F + SY + LC+ G+TR A +L+++ Q + +
Sbjct: 175 F-----LFHDKVVALGFHFDQI--SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C+ ++L M+ + PDV Y LI GF K A++ KM+
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ ++ + G E V MM+ + I+ N ++ +
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNA 299
KA I + + G I+ ++ CK K EA LF + N+ D+ ++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN--LFKEMHRKNIIPDVVTYSS 405
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I GL + R+ A L ++ ++G+ + N ++ AL +V++A
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKA 454
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
GG +PD +++ +I+ C DEA+ +F+ M + D +YS LI L + G
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
A +L D++ ++ G P +Y I LC+ + KA +L ++ +G Q
Sbjct: 417 SYALQLVDQMHDR-------GVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469
Query: 123 L-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+ +Y +I G C+ G E+ ++ +L + +V+ Y +I GF + A+ L
Sbjct: 470 MYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLS 529
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR 224
KM + +P T+ I+ L +K + ++ M+ R +R
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVR 572
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 145/345 (42%), Gaps = 11/345 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P FN ++ S + + L + + M+ + + + +ILI CQ G A
Sbjct: 82 TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 141
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
+F ++ K G P ++ + + LC G+ ++A +++ G D +SY
Sbjct: 142 VFAKIL-------KMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYG 194
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ G +LL + P+V +Y+ +ID + A + +M+
Sbjct: 195 TLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISK 254
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T+ ++++ G +++ + M+ NI+ ++ + G +
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 247 FEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+ +++ K+G V ++ C ++ +A+ + + N DI + +I G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+I + EA L E+ K + ++ + L+ L G++ A
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P T+N+++ + C +D+A+ + +K+ + + +YSILI+ LCQ G +
Sbjct: 428 DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLE 487
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A K+F+ L K G +Y + Q C G +A +L ++ G D
Sbjct: 488 DARKVFEGLLVK-------GHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDA 540
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
+Y +I+ ++ + +LL M+ R P
Sbjct: 541 KTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 161/363 (44%), Gaps = 41/363 (11%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +FN +I + C GN+D+A++VF M + AD +YS L+ LC G D+A L
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
DE+ + G+ P ++ + LC+ G +A +++ + +G + ++Y +
Sbjct: 233 LDEMQVE-------GTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNS 285
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G C +G + LL M+ +P+ + L+DGF++ + L + L + +
Sbjct: 286 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 345
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
Y ++ S+++ L ++G ++ M+++ + N
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNT-------------------- 385
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEI 307
+ ++ LC+ GK EA++ L+ H + ++++ G E
Sbjct: 386 ------------IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEA 433
Query: 308 NRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLS 367
+ +A + E+ + + C + L+ L GK++EA + K++ + V++
Sbjct: 434 GDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLS-RGIKLDVVA 492
Query: 368 YSS 370
YSS
Sbjct: 493 YSS 495
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 149/351 (42%), Gaps = 43/351 (12%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ +G F P+ FN LI + C G+L A K+ +NM + +Y+ L+ LC +G
Sbjct: 236 MQVEGTF-PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKG 294
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
DKA L + + + V P ++ + +HG+ RVL + ++G +
Sbjct: 295 KLDKAMSLLNRMVANKCV-------PNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYR 347
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ SY ++I G +EG E+G +L M+ + P+ +Y LIDG ++ KP A E
Sbjct: 348 GNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEY 407
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L +M + P + T+ S++ E G H++ V M D +
Sbjct: 408 LIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCN--------------- 452
Query: 240 HGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
H + + I ++ LCK GKL EA + L +D+ ++
Sbjct: 453 --HHEVCYSI---------------LINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSS 495
Query: 300 VILGLCEINRVLEAFGLCYELV--EKGLHQELTCLNDLVTALEARGKVEEA 348
+I G C V + L +++ L ++ N L+ A + V A
Sbjct: 496 MIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRA 546
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 91/214 (42%), Gaps = 31/214 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P++ T+++L+ + AG++ +A+ V++ M + YSILI LC+ G +A
Sbjct: 415 GHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEA 474
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ---DP 122
++ ++ + I L +Y + C + ++ Q++ + D
Sbjct: 475 LIVWKQMLSRGIKL-------DVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDV 527
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV---------------------EIYD 161
++Y ++ C + + ++L ML + PD E D
Sbjct: 528 VTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLD 587
Query: 162 CLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
L+ +++ + + A +E ML+ LPK STW
Sbjct: 588 ELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTW 621
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T+ L++ C+ G+ A KVF+ M + + Y+ LIR C GD D+A
Sbjct: 118 GLLPTLITYGILLNCCCNQGDFSNARKVFDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEA 177
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
E+ + E G +P +Y + C+ G ++ + +++ G D ++
Sbjct: 178 ERFLKLMRES-------GVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVT 230
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++ C+ G E ++M + P++ +Y+CLIDG+ + + AM ++M
Sbjct: 231 FAILVDVLCKVGDLEAARNCFVYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEME 290
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ T ++ L + G E+ + M + N I+ G +
Sbjct: 291 RNGVFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDME 350
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA E+ + ++ + ++ CK+G + A L + + D+ A+I
Sbjct: 351 KAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALI 410
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C++ AF L E++E GL + + L+ L GK A
Sbjct: 411 DGHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLIDGLLKEGKTYGA 457
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 144/347 (41%), Gaps = 42/347 (12%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
N L+HS + D V+ N+ + + +Y IL+ C +GD+ A K+FDE+ +
Sbjct: 92 NALLHSLVKSKKFDSVWSVYNNLLSRGLLPTLITYGILLNCCCNQGDFSNARKVFDEMIQ 151
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHC 133
+ IV P Y + + C G +AER L+ + + G + L +Y+T+I G+C
Sbjct: 152 RGIV-------PNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYC 204
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTS 193
+ G + +E+ MLR PDV + L+D + A M K P
Sbjct: 205 KTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDKFGVFPNLY 264
Query: 194 TWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELL 253
++ ++ + G E+ R+ M R+ F V
Sbjct: 265 VYNCLIDGYCKAGDLVEAMRLRDEM-----------------------ERNGVFGDV--- 298
Query: 254 YKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEA 313
F I +V+ LC G+ EA+ L+ K + NAVI G C++ + +A
Sbjct: 299 ----FTCSI--LVKGLCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKA 352
Query: 314 FGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA--FISKRIPGL 358
+C ++ E+ + + + L+ +G ++ A +I I GL
Sbjct: 353 IEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGL 399
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 143/328 (43%), Gaps = 28/328 (8%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P+ T+ TLI +C GN+ +++ +M + D +++IL+ LC+ GD +
Sbjct: 186 ESGVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGDLE 245
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDP 122
A F + + KFG P Y + C+ G +A R+ ++ + G D
Sbjct: 246 AARNCF-------VYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDV 298
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ ++ G C G +E L+ M + + Y+ +IDG+ + A+E +
Sbjct: 299 FTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQ 358
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M + P T+ +++ +KG + + + M+ + + ++ T I+ GH
Sbjct: 359 MTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALID---GHCK 415
Query: 243 RDK---AFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLK--------N 288
+ AFE+ + + + G V + ++ L K GK A KL L + +
Sbjct: 416 VENSKVAFELHKEMMEAGLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKTEVGSPGGKTD 475
Query: 289 HHNV---DIDLCNAVILGLCEINRVLEA 313
H V + + A+I GLC+ R+ +A
Sbjct: 476 HSGVCSPNEVMYAALIQGLCKDGRIFKA 503
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 24/211 (11%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ TF+TLI C GN+ A+ ++ M + D +Y+ LI C+ + A +L
Sbjct: 366 PNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFEL 425
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-------- 120
E+ E G P + + L + GKT A ++ + + G+
Sbjct: 426 HKEMMEA-------GLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKTEVGSPGGKTDHSG 478
Query: 121 ----DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
+ + Y +I G C++G + M F PD+ +Y +++ +
Sbjct: 479 VCSPNEVMYAALIQGLCKDGRIFKATKFFKDMRCSGFKPDMVLYVIMLEAHFRFKHMFDV 538
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M MLK+ L TS + R+L +G+
Sbjct: 539 MMLHADMLKTGVLRNTS-----VCRVLTRGY 564
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 43/357 (12%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
TFN I+ C AG L++A E+MK + ++ + +Y+ L+ C+RG K K E
Sbjct: 68 TFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKA--EA 125
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
F KE++ K P ++ + C+ A++ ++ K+G + + ++Y ++I G
Sbjct: 126 FMKEMLANKIC--PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLING 183
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C G E +L M+ P++ Y+ LI+GF +K A + + + K +P
Sbjct: 184 LCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPN 243
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+++++ ++G E + MLD I N++ I L A E++
Sbjct: 244 VITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLN 303
Query: 252 LLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL--LFSL---KNH--HNVDID-LC--- 297
+ KG V ++ LCK K A KLL +F+L NH +N +D C
Sbjct: 304 EMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEG 363
Query: 298 ------------------------NAVILGLCEINRVLEAFGLCYELVEKGLHQELT 330
N +I G C+IN++ A GL E++EKGL+ T
Sbjct: 364 KLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRT 420
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 106/200 (53%), Gaps = 8/200 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ TFNT+I ++C G ++E + +M + + + ++Y+ LI LC++ D A++L
Sbjct: 242 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 301
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
+E+ K G + +Y + LC++ K+R AE++L ++ G + + ++Y T
Sbjct: 302 LNEMENK-------GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNT 354
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C EG + + M + P+V Y+ LI G+ + +K A L +ML+
Sbjct: 355 LMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKG 414
Query: 188 YLPKTSTWHSILARLLEKGF 207
P +T+ + +LEKGF
Sbjct: 415 LNPNRTTYDIVRLEMLEKGF 434
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N LI C +L A ++ M+N + D +Y+ILI LC+
Sbjct: 272 DEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSR 331
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP- 122
AEKL +E+F G +P +Y + C GK + A V R M++ + P
Sbjct: 332 NAEKLLNEMFN-------LGLKPNHVTYNTLMDGYCMEGKLKAALNV-RTRMEKERKQPN 383
Query: 123 -LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYD 161
++Y +I G+C+ E LL ML + P+ YD
Sbjct: 384 VVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 423
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 144/323 (44%), Gaps = 11/323 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SP+ T++ LI C G L +A+ +F M + + ++SIL+ C+ G +A+
Sbjct: 73 ISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAK 132
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSY 125
+ ++ K G +P +Y + C + KAE + + RG T + SY
Sbjct: 133 NVL-------AMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSY 185
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+ + +L M + PDV Y LIDG + + A+E +++M
Sbjct: 186 SIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHD 245
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T++SIL L +K ++ + + + IR ++N T ++ L G +
Sbjct: 246 RGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLED 305
Query: 246 AFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A ++ E L KG+ + + ++Q C +G EA LL +N D +IL
Sbjct: 306 ARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIIL 365
Query: 303 GLCEINRVLEAFGLCYELVEKGL 325
L E + A L E++ +GL
Sbjct: 366 SLFEKDENDMAEKLLREMIMRGL 388
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 148/351 (42%), Gaps = 32/351 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D ++ TLI+ C G AL++ + V D+ YS +I ++C+ + A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDA 61
Query: 66 EKLFDELFEKEIV------------LCKFGS----------------QPLAASYKPIFQY 97
L+ E+ K I C G P ++ +
Sbjct: 62 FDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDG 121
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
C+ G+ ++A+ VL +MK+G + D ++Y +++ G+C + M R +
Sbjct: 122 FCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTAN 181
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
V+ Y +I+GF + AM+ ++M P T+ +++ L + G + +
Sbjct: 182 VQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVD 241
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRG 273
M DR + +I ++ L H DKA ++ L +G + +V+ LC+ G
Sbjct: 242 EMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSG 301
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
KL +ARK+ L +N+D+ +I G C+ EA L ++ E G
Sbjct: 302 KLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 352
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 125/285 (43%), Gaps = 41/285 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+++L+ +C +++A +F M + VTA+ SYSI+I C+ D+A
Sbjct: 142 GIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEA 201
Query: 66 EKLFDELFEKEIV------------LCKF----------------GSQPLAASYKPIFQY 97
KLF E+ K+I LCK G QP +Y I
Sbjct: 202 MKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDA 261
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC+ KA +L ++ +G + D +Y ++ G CR G E+ ++ +L + + D
Sbjct: 262 LCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLD 321
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
V Y +I GF K A+ L KM ++ +P T+ I+ L EK
Sbjct: 322 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDEND------- 374
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV----ELLYKKG 257
M ++ +R+ I IEL G D+ +V ELL+ +G
Sbjct: 375 -MAEKLLREMIMRGLLVIELKPGFDISDEGKAVVAAAIELLHNQG 418
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 128/275 (46%), Gaps = 8/275 (2%)
Query: 89 ASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIW 147
SY + LC+ G+TR A +LR++ + Q D + Y ++I C++ + ++L
Sbjct: 8 VSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLYSE 67
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M + P+V Y LI GF K A++ KM+ + P T+ ++ ++G
Sbjct: 68 MAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGR 127
Query: 208 PHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE--- 264
E+ V MM+ + I+ ++ + ++ +KA I + +G ++
Sbjct: 128 VKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSI 187
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNAVILGLCEINRVLEAFGLCYELVE 322
++ CK + EA K LF +H + D+ +A+I GLC+ R+ A L E+ +
Sbjct: 188 MINGFCKIKMVDEAMK--LFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHD 245
Query: 323 KGLHQELTCLNDLVTALEARGKVEEAAFISKRIPG 357
+G ++ N ++ AL + V++A + ++ G
Sbjct: 246 RGQQPDIITYNSILDALCKKHHVDKAIALLTKLKG 280
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+N+++ + C ++D+A+ + +K + D +Y+IL++ LC+ G +
Sbjct: 245 DRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLE 304
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A K+F++L K G +Y + Q C+ G +A +L ++ + G D
Sbjct: 305 DARKVFEDLLVK-------GYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDA 357
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL-----PDVEIYD 161
+Y +I+ + + +LL M+ R L P +I D
Sbjct: 358 KTYEIIILSLFEKDENDMAEKLLREMIMRGLLVIELKPGFDISD 401
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 161/358 (44%), Gaps = 15/358 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D + LI+S C G++ A V + D+ +++ LI+ LC +GD +A
Sbjct: 44 GIKLDLVNCSILINSFCQLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQA 103
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D++ G SY + LC+ G+TR A +LR++ + Q D +
Sbjct: 104 LHFHDKVIA-------MGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVM 156
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I C++ + ++L M + P+V Y LI GF K A++ KM+
Sbjct: 157 YSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMI 216
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ ++ ++G E+ V MM+ + I+ ++ + ++ +
Sbjct: 217 LENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVN 276
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNA 299
KA I + +G ++ ++ CK + EA K LF +H + D+ +A
Sbjct: 277 KAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMK--LFKEMHHKQIFPDVITYSA 334
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPG 357
+I GLC+ R+ A L E+ ++G ++ N ++ AL + V++A + ++ G
Sbjct: 335 LIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKG 392
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 144/323 (44%), Gaps = 11/323 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SP+ T++ LI C G L +A+ +F M + + ++SIL+ C+ G +A+
Sbjct: 185 ISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAK 244
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSY 125
+ ++ K G +P +Y + C + KAE + + RG T + SY
Sbjct: 245 NVL-------AMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSY 297
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+ + +L M + PDV Y LIDG + + A+E +++M
Sbjct: 298 SIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHD 357
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T++SIL L +K ++ + + + IR ++N T ++ L G +
Sbjct: 358 RGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLED 417
Query: 246 AFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A ++ E L KG+ + + ++Q C +G EA LL +N D +IL
Sbjct: 418 ARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIIL 477
Query: 303 GLCEINRVLEAFGLCYELVEKGL 325
L E + A L E++ +GL
Sbjct: 478 SLFEKDENDMAEKLLREMIMRGL 500
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 153/347 (44%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TLI C G++ +AL + + D SY LI LC+ G+ A
Sbjct: 79 GYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETRAA 138
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLS 124
+L + K + Q A Y I +C+ A + ++ KR + + ++
Sbjct: 139 LELLRRVDGKLV-------QLDAVMYSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVT 191
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G ++ +L M+ + P+V + L+DGF ++ + A L M+
Sbjct: 192 YSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMM 251
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T+ S++ +++ + M R + N+ + I D
Sbjct: 252 KQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVD 311
Query: 245 KAFEIV-ELLYKKGF--CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A ++ E+ +K+ F + ++ LCK G++ A +L+ DI N+++
Sbjct: 312 EAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSIL 371
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ + V +A L +L +G+ ++ LV L GK+E+A
Sbjct: 372 DALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDA 418
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 29/229 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+++L+ +C +++A +F M + VTA+ SYSI+I C+ D+A
Sbjct: 254 GIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEA 313
Query: 66 EKLFDELFEKEIV------------LCKF----------------GSQPLAASYKPIFQY 97
KLF E+ K+I LCK G QP +Y I
Sbjct: 314 MKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDA 373
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC+ KA +L ++ +G + D +Y ++ G CR G E+ ++ +L + + D
Sbjct: 374 LCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLD 433
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
V Y +I GF K A+ L KM ++ +P T+ I+ L EK
Sbjct: 434 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEK 482
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + + +++ +I+ C +DEA+K+F+ M + Q+ D +YS LI LC+ G A
Sbjct: 289 GVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYA 348
Query: 66 EKLFDELFEK----EIV--------LCK----------------FGSQPLAASYKPIFQY 97
+L DE+ ++ +I+ LCK G +P +Y + +
Sbjct: 349 LELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKG 408
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC GK A +V ++ +G D +Y +I G C +G ++ LL M +PD
Sbjct: 409 LCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPD 468
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ Y+ +I +KD+ +A + L +M+
Sbjct: 469 AKTYEIIILSLFEKDENDMAEKLLREMI 496
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+N+++ + C ++D+A+ + +K + D +Y+IL++ LC+ G +
Sbjct: 357 DRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLE 416
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A K+F++L K G +Y + Q C+ G +A +L ++ + G D
Sbjct: 417 DARKVFEDLLVK-------GYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDA 469
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
+Y +I+ + + +LL M+ R L
Sbjct: 470 KTYEIIILSLFEKDENDMAEKLLREMIMRGLL 501
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 154/340 (45%), Gaps = 14/340 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+N L++ + G+ + +V M V+ + + ++L+R C++G D+A
Sbjct: 256 GLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEA 315
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
EKL E+ E E+++ Y + C+ G+ A R+ ++++ G + +
Sbjct: 316 EKLLREVEEDELLVVD------ERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVI 369
Query: 126 M-TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T+I G+C+ G + + M+ + PD Y+ L+DG+ ++ K A E+ML
Sbjct: 370 CNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEML 429
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+++++ L++ G ++ + +M++R + N ++ F G D
Sbjct: 430 GDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSD 489
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + + +GF V ++ LCK GKL EA +F + D
Sbjct: 490 RAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGA--VFDRMKELGLSPDEITYRT 547
Query: 302 L--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
L G C+ V EAF + + + + + N L+ L
Sbjct: 548 LSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGL 587
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 169/413 (40%), Gaps = 69/413 (16%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D PD ++NTL+ +C G + +A + E M +T +Y+ +I+ L G YD
Sbjct: 395 DWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYD 454
Query: 64 KAEKLFDELFEK-----EIVLC-------KFGSQPLA----------------ASYKPIF 95
A L+ + E+ EI C K G A ++ +
Sbjct: 455 DALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMI 514
Query: 96 QYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
LC+ GK +A V ++ + G + D ++Y T+ G+C+ G + +++ M R+
Sbjct: 515 SGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMS 574
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
+E+Y+ LIDG + K + L +M P T+ ++++ ++ ++ +
Sbjct: 575 ASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHL 634
Query: 215 TVMMLDRNIRQNINLSTKSIELLFGHGHRDKA---------FEIVEL------------- 252
M++R N+ + +K + L+ +A F+I+ +
Sbjct: 635 YFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDL 694
Query: 253 ----------LYKKGFCVKIEEVVQF------LCKRGKLPEARKLLLFSLKNHHNVDIDL 296
L K C + + + LCK GKL EAR +L + D +
Sbjct: 695 TLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPD-NF 753
Query: 297 CNAVILGLCEIN-RVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ C ++ V EAF L E++EKGL +T N L+ L G ++ A
Sbjct: 754 TYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRA 806
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 162/376 (43%), Gaps = 43/376 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF+ T FNT+I C G L EA VF+ MK ++ D +Y L C+ G+ +A
Sbjct: 502 GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEA 561
Query: 66 EKLFDELFEKEIVLCKFGSQPLAAS---YKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
F+ + V+ + Q ++AS Y + L + K +L ++ RG + +
Sbjct: 562 -------FQIKGVMER---QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPN 611
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y T+I G C E + + L M+ R F P+V + ++ + D+ A L+
Sbjct: 612 VVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILD 671
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM--------LDRNIRQNINLSTKS 233
KML L + + +L++ E+ ++ + L NI NI +
Sbjct: 672 KMLDFDIL---AVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNI-----A 723
Query: 234 IELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHH 290
I+ L G D+A ++ +L +GF ++ G + EA KL L+
Sbjct: 724 IDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGL 783
Query: 291 NVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN----------DLVTALE 340
+I + NA+I GLC++ + A L Y+L +KGL N DL A
Sbjct: 784 IPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843
Query: 341 ARGKVEEAAFISKRIP 356
R K+ E ++ IP
Sbjct: 844 LREKMTEEGISTRIIP 859
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 176/403 (43%), Gaps = 42/403 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQ-VTADSASYSILIRNLCQRGDYDK 64
G S + T L+ +C G +DEA K+ ++ + + D Y +L+ CQ G +
Sbjct: 291 GVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMED 350
Query: 65 AEKLFDELFEKEIVL------------CKFGS----------------QPLAASYKPIFQ 96
A ++ DE+ + + CK G +P SY +
Sbjct: 351 AVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLD 410
Query: 97 YLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
C GK KA + +++ G T ++Y TVI G G+Y++ L M+ R P
Sbjct: 411 GYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTP 470
Query: 156 DVEIYDC-LIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
+ EI C ++D F + AM +++L + T ++++++ L + G E+ V
Sbjct: 471 N-EISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAV 529
Query: 215 TVMMLDRNIRQN-INLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIE---EVVQFLC 270
M + + + I T S + +G+ +AF+I ++ ++ IE ++ L
Sbjct: 530 FDRMKELGLSPDEITYRTLS-DGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLF 588
Query: 271 KRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELT 330
K KL + LL+ + ++ +I G C+ ++ +AF L +E++E+G +
Sbjct: 589 KIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVV 648
Query: 331 CLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSSKKS 373
+ +V++L ++ EA I ++ LD +L+ +K S
Sbjct: 649 VCSKIVSSLYRDDRISEATVILDKM-----LDFDILAVHNKCS 686
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 149/379 (39%), Gaps = 33/379 (8%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
F+ L+ + G AL VF+ M S S L+ L Q+G+ A +FD++
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217
Query: 73 FEKEIV----------------------------LCKFGSQPLAASYKPIFQYLCEHGKT 104
IV + K G +P +Y + G
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277
Query: 105 RKAERVLRQIMKRGTQDPLSYMTVIM-GHCREGAYENGYELLIWMLRRDFL-PDVEIYDC 162
ERVLR + +RG + T++M G+C++G + +LL + + L D +Y
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGV 337
Query: 163 LIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN 222
L+DG+ Q + A+ ++ML+ ++++ + G E+ RV V M+D N
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397
Query: 223 IRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEAR 279
++ + ++ G KAF + E + G V V++ L G +A
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457
Query: 280 KLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
L ++ + C ++ ++ A L E++ +G + N +++ L
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGL 517
Query: 340 EARGKVEEAAFISKRIPGL 358
GK+ EA + R+ L
Sbjct: 518 CKMGKLMEAGAVFDRMKEL 536
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 161/390 (41%), Gaps = 70/390 (17%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSI--------------- 51
+ P + +++ L+H A EA V + + T + +Y++
Sbjct: 97 YRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCS 156
Query: 52 -----LIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRK 106
L++ +RG A +FDE + + G P S + L + G+ R
Sbjct: 157 GVFDMLMKAFAERGMTKHALYVFDE-------MSRIGRVPGLRSCSFLLGKLVQKGEGRV 209
Query: 107 AERVLRQIMKRGTQDPLSYM--TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI 164
A V QI+ G P YM V+ HC+ G + E+L M++ P+V Y+ L+
Sbjct: 210 AVMVFDQIVGTGIV-PDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLV 268
Query: 165 DGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR 224
+G++ + E +E++L+ +M +R +
Sbjct: 269 NGYVGRGD----FEGVERVLR-------------------------------LMSERGVS 293
Query: 225 QNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFL----CKRGKLPEARK 280
+N+ T + G D+A +++ + + V E V L C+ G++ +A +
Sbjct: 294 RNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVR 353
Query: 281 LLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALE 340
+ L+ V++ +CN +I G C++ +V EA + +V+ L + N L+
Sbjct: 354 IRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYC 413
Query: 341 ARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
GKV +A + + + G + + +V++Y++
Sbjct: 414 REGKVSKAFMLCEEMLG-DGITPTVVTYNT 442
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 158/350 (45%), Gaps = 22/350 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P ++N +I C G E+L+++E MK D+ +YS LI LC+ GD D A K+
Sbjct: 256 PSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKV 315
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
++E+ + G + + + LC+ GK ++ + ++ G+++ +SY
Sbjct: 316 YEEMVLR-------GVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNVF 368
Query: 129 IMGHCREGAYENGY--ELL-IWMLRRDFLPDVE--IYDCLIDGFLQKDKPLLAMETLEKM 183
+ +G +ENG E++ +W + R+ DVE Y L+ G + A+ LE
Sbjct: 369 L-----KGLFENGKVDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGA 423
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ S++ L +G E+A+V +M R + N ++ I+ +
Sbjct: 424 DDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKV 483
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
D A ++ + G V V+ C+ + PEA + L+ D+ + +
Sbjct: 484 DSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTL 543
Query: 301 ILGLCE--INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I GLC+ +N A LCY+ + KG ++T N ++ L + GKV+ A
Sbjct: 544 IDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYA 593
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 43/336 (12%)
Query: 16 TLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
TL+ ++ D+ALK+F+NM + F+ S++ L+ + +D+AEK F FE
Sbjct: 86 TLLKAYAKTSMPDQALKLFQNMFRVFRCRPGIRSFNTLLNAFAESHQWDRAEKFF-AYFE 144
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHC 133
G +P +Y + + LC+ G+ KA++++ + G + D +Y T+I
Sbjct: 145 TA------GVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFV 198
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK-SSYLPKT 192
+ + E+ M R PDV Y+ +IDGF + + E++L+ + P
Sbjct: 199 KIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSV 258
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVEL 252
+++ +++ L G ES + M + + + AF L
Sbjct: 259 VSYNIMISGLCRCGRFKESLEIWERMKMNDWKHD-------------------AFTYSAL 299
Query: 253 LYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLE 312
++ LC+ G L ARK+ + D+ CNA++ GLC+ +V E
Sbjct: 300 IHG-------------LCEGGDLDGARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDE 346
Query: 313 AFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+F L E+ G + + N + L GKV+E
Sbjct: 347 SFELWEEMGNCG-SRNVVSYNVFLKGLFENGKVDEV 381
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 149/350 (42%), Gaps = 13/350 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P T+N L+ C G +A K+ M + + D +Y LI + D +
Sbjct: 146 AGVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFVKIRDLNS 205
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-- 122
A ++FDE+ E+ G +P A Y I + G K + + ++++ T P
Sbjct: 206 ALEVFDEMSER-------GVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSV 258
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY +I G CR G ++ E+ M D+ D Y LI G + A + E+
Sbjct: 259 VSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKVYEE 318
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M+ T +++L L + G ES + M + R ++ + ++ LF +G
Sbjct: 319 MVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNV-FLKGLFENGK 377
Query: 243 RDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
D+ + E+L + V+ +V LCK G + +A ++L + +VD ++
Sbjct: 378 VDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSS 437
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+I GLC R+ EA + + ++G N L+ KV+ A
Sbjct: 438 MINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAV 487
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQ--RGDYD 63
G SP+ T+N +I+ C A EA E M D +YS LI LCQ + D
Sbjct: 497 GCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGLCQGKMNEND 556
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
A +L + K G +P + + LC GK + A ++ + KR + +
Sbjct: 557 TALRLCYQFLAK-------GFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCANLV 609
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ T++ G + G E ++ + PD+ Y+ ++G + A+ L
Sbjct: 610 THNTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDA 669
Query: 184 LKSSYLPKTSTWHSILAR 201
L + +P TW +IL R
Sbjct: 670 LDNGVMPTVITW-NILVR 686
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 158/350 (45%), Gaps = 22/350 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P ++N +I C G E+L+++E MK D+ +YS LI LC+ GD D A K+
Sbjct: 256 PSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKV 315
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
++E+ + G + + + LC+ GK ++ + ++ G+++ +SY
Sbjct: 316 YEEMVLR-------GVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNVF 368
Query: 129 IMGHCREGAYENGY--ELL-IWMLRRDFLPDVE--IYDCLIDGFLQKDKPLLAMETLEKM 183
+ +G +ENG E++ +W + R+ DVE Y L+ G + A+ LE
Sbjct: 369 L-----KGLFENGKVDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGA 423
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ S++ L +G E+A+V +M R + N ++ I+ +
Sbjct: 424 DDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKV 483
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
D A ++ + G V V+ C+ + PEA + L+ D+ + +
Sbjct: 484 DSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTL 543
Query: 301 ILGLCE--INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I GLC+ +N A LCY+ + KG ++T N ++ L + GKV+ A
Sbjct: 544 IDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYA 593
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 43/336 (12%)
Query: 16 TLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
TL+ ++ D+ALK+F+NM + F+ S++ L+ + +D+AEK F FE
Sbjct: 86 TLLKAYAKTSMPDQALKLFQNMFRVFRCRPGIRSFNTLLNAFAESHQWDRAEKFF-AYFE 144
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHC 133
G +P +Y + + LC+ G+ KA++++ + G + D +Y T+I
Sbjct: 145 TA------GVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFV 198
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK-SSYLPKT 192
+ + E+ M R PDV Y+ +IDGF + + E++L+ + P
Sbjct: 199 KIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSV 258
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVEL 252
+++ +++ L G ES + M + + + AF L
Sbjct: 259 VSYNIMISGLCRCGRFKESLEIWERMKMNDWKHD-------------------AFTYSAL 299
Query: 253 LYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLE 312
++ LC+ G L ARK+ + D+ CNA++ GLC+ +V E
Sbjct: 300 IHG-------------LCEGGDLDGARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDE 346
Query: 313 AFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+F L E+ G + + N + L GKV+E
Sbjct: 347 SFELWEEMGNCG-SRNVVSYNVFLKGLFENGKVDEV 381
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 149/350 (42%), Gaps = 13/350 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P T+N L+ C G +A K+ M + + D +Y LI + D +
Sbjct: 146 AGVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFVKIRDLNS 205
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-- 122
A ++FDE+ E+ G +P A Y I + G K + + ++++ T P
Sbjct: 206 ALEVFDEMSER-------GVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSV 258
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY +I G CR G ++ E+ M D+ D Y LI G + A + E+
Sbjct: 259 VSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKVYEE 318
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M+ T +++L L + G ES + M + R ++ + ++ LF +G
Sbjct: 319 MVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNV-FLKGLFENGK 377
Query: 243 RDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
D+ + E+L + V+ +V LCK G + +A ++L + +VD ++
Sbjct: 378 VDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSS 437
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+I GLC R+ EA + + ++G N L+ KV+ A
Sbjct: 438 MINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAV 487
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQ--RGDYD 63
G SP+ T+N +I+ C A EA E M D +YS LI LCQ + D
Sbjct: 497 GCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGLCQGKMNEND 556
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
A +L + K G +P + + LC GK + A ++ + KR + +
Sbjct: 557 TALRLCYQFLAK-------GFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCANLV 609
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ T++ G + G E ++ + PD+ Y+ ++G + A+ L
Sbjct: 610 THNTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDA 669
Query: 184 LKSSYLPKTSTWHSILAR 201
L + +P TW +IL R
Sbjct: 670 LDNGVMPTVITW-NILVR 686
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 154/331 (46%), Gaps = 20/331 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ F +I C G++ +A ++ E M + +++ LI LC++G +
Sbjct: 226 DMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTE 285
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
KA +LF +L E +P +Y + C K +AE +L ++ ++G +
Sbjct: 286 KAFRLFLKLVRSE------NHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNT 339
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y T+I GHC+ G +E Y+L+ M F P+V Y+ +++G ++ + A + LE
Sbjct: 340 NTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLED 399
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
++ P T++ +++ ++ + R +++ ++ ++ I S L
Sbjct: 400 GFQNGLKPDRFTYNILMSEHCKQA----NIRQALVLFNKMVKSGIQPDIHSYTTLIAVFC 455
Query: 243 RDKAFEIVELLYKKGFCVKI-------EEVVQFLCKRGKLPEARKLLLFSLKNHHNV-DI 294
R+ + E+ +++ + I ++ C+ G L A K L +H D
Sbjct: 456 RENRMKESEMFFEEAVRIGIIPTNRTYTSMICGYCREGNLTLAMK-FFHRLSDHGCAPDS 514
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
A+I GLC+ +++ EA GL ++EKGL
Sbjct: 515 ITYGAIISGLCKQSKLDEARGLYDSMIEKGL 545
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 166/350 (47%), Gaps = 12/350 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P+T T N +I G ++ A +FE M V DS SY +++ C+ G+
Sbjct: 121 NQGLVPNTRTLNLIIKVTSEMGLVEYAELLFEEMCVRGVQPDSVSYRVMVVMYCKIGNIL 180
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+A++ + E+ V+ A++ I CE G +A R+++ G + L
Sbjct: 181 EADRWLSAMLERGFVVDN-------ATFTLIISRFCEKGYATRALWYFRRLVDMGLEPNL 233
Query: 124 -SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++ +I G C+ G+ + +E+L M+ + + P+V + LIDG +K A K
Sbjct: 234 INFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLK 293
Query: 183 MLKS-SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+++S ++ P T+ ++++ + + + + M ++ + N N T I+ G
Sbjct: 294 LVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAG 353
Query: 242 HRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+ ++A++++ L+ +GF + +V LCKRG++ EA K+L +N D N
Sbjct: 354 NFERAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYN 413
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ C+ + +A L ++V+ G+ ++ L+ +++E+
Sbjct: 414 ILMSEHCKQANIRQALVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKES 463
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 14/279 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P+T T+ TLI HC AGN + A + M + + + +Y+ ++ LC+RG
Sbjct: 332 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQ 391
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+A K+ ++ F+ G +P +Y + C+ R+A + +++K G Q D
Sbjct: 392 EAYKMLEDGFQN-------GLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKSGIQPDI 444
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
SY T+I CRE + +R +P Y +I G+ ++ LAM+ +
Sbjct: 445 HSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNRTYTSMICGYCREGNLTLAMKFFHR 504
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ P + T+ +I++ L ++ E+ + M+++ + + I L + +
Sbjct: 505 LSDHGCAPDSITYGAIISGLCKQSKLDEARGLYDSMIEKGL---VPCEVTRITLAYEYCK 561
Query: 243 RD---KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEA 278
D A I+E L KK + +V+ LC K+ A
Sbjct: 562 VDDCLSAMVILERLEKKLWIRTATTLVRKLCSEKKVGMA 600
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 156/343 (45%), Gaps = 24/343 (6%)
Query: 17 LIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKE 76
++ + G L EA+++ M N + ++ + +++I+ + G + AE LF+E+
Sbjct: 99 MVENFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNLIIKVTSEMGLVEYAELLFEEM---- 154
Query: 77 IVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCRE 135
C G QP + SY+ + C+ G +A+R L +++RG D ++ +I C +
Sbjct: 155 ---CVRGVQPDSVSYRVMVVMYCKIGNILEADRWLSAMLERGFVVDNATFTLIISRFCEK 211
Query: 136 GAYENGYELLIWMLRR----DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
G +W RR P++ + C+I+G ++ A E LE+M+ + P
Sbjct: 212 GYATRA----LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPN 267
Query: 192 TSTWHSILARLLEKGFPHESARVTVMML-DRNIRQNINLSTKSIELLFGHGHRDKAFEIV 250
T S++ L +KG+ ++ R+ + ++ N + N+ T I ++A ++
Sbjct: 268 VYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLL 327
Query: 251 ELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDLC--NAVILGLC 305
+ ++G + CK G A L+ +L + ++C NA++ GLC
Sbjct: 328 SRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLM--NLMSSEGFSPNVCTYNAIVNGLC 385
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ RV EA+ + + + GL + N L++ + + +A
Sbjct: 386 KRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQA 428
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 11/280 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SPD T+N LI C G L +A+ +F M + D +++IL+ C+ G +A+
Sbjct: 73 ISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAK 132
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+ + ++ G +P +Y + C K KA+ + + + G D SY
Sbjct: 133 NVLAMMMKQ-------GMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSY 185
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+ + L M R +PDV Y+ LIDG + K A++ +++M
Sbjct: 186 SILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 245
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ SIL L + ++ + + D+ IR N+ T I+ L G D
Sbjct: 246 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDD 305
Query: 246 AFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
A I E L KG+ + + ++ C +G EA LL
Sbjct: 306 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 345
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 8/201 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG +PD +++ LI+ C DEA+ +FE M ++ D +Y+ LI LC+ G
Sbjct: 176 GGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISY 235
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
A KL DE+ ++ G P +Y I LC++ + KA +L ++ +G + +
Sbjct: 236 ALKLVDEMHDR-------GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMY 288
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I G C+ G ++ + + +L + + V Y +I GF K A+ L KM
Sbjct: 289 TYTILIDGLCKGGRLDDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 348
Query: 184 LKSSYLPKTSTWHSILARLLE 204
+S P T+ I+ L +
Sbjct: 349 KDNSCFPNALTYEIIIRSLFD 369
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 138/343 (40%), Gaps = 32/343 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D ++ TLI+ C G AL++ + V Y+ +I +C+ + A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDA 61
Query: 66 EKLFDELFEKEIV------------LCKFGS----------------QPLAASYKPIFQY 97
L+ E+ K I C G P ++ +
Sbjct: 62 FDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDA 121
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
C+ GK ++A+ VL +MK+G + + ++Y ++ G+C + M + PD
Sbjct: 122 FCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPD 181
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y LI+G + AM E+M +P T++S++ L + G + ++
Sbjct: 182 IHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVD 241
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRG 273
M DR + +I + ++ L + DKA ++ L +G + ++ LCK G
Sbjct: 242 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 301
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
+L +A + L +N+ ++ +I G C EA L
Sbjct: 302 RLDDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALAL 344
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T++ L+ +C +++A +F M V D SYSILI LC+ D+A
Sbjct: 142 GMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEA 201
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF+E+ ++I+ P +Y + LC+ GK A +++ ++ RG D ++
Sbjct: 202 MNLFEEMHCRKII-------PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIIT 254
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ C+ + LL + + P++ Y LIDG + + A E +L
Sbjct: 255 YSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLL 314
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
Y +T+ ++ KG E+ + M D + N
Sbjct: 315 VKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPN 356
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 5/270 (1%)
Query: 89 ASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMTVIMGHCREGAYENGYELLIW 147
SY + LC+ G+TR A ++LR++ + Q + Y T+I G C++ + ++L
Sbjct: 8 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M+ + PDV Y+ LI GF K A+ KM + P T++ ++ ++G
Sbjct: 68 MVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGK 127
Query: 208 PHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE--- 264
E+ V MM+ + ++ N+ + ++ +KA I + + G I
Sbjct: 128 MKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSI 187
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
++ LCK EA L D+ N++I GLC++ ++ A L E+ ++G
Sbjct: 188 LINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 247
Query: 325 LHQELTCLNDLVTALEARGKVEEA-AFISK 353
+ ++ + ++ AL +V++A A ++K
Sbjct: 248 VPPDIITYSSILDALCKNHQVDKAIALLTK 277
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 43/357 (12%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
TFN I+ C AG L++A E+MK + ++ + +Y+ L+ C+RG K K E
Sbjct: 202 TFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKA--EA 259
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
F KE++ K P ++ + C+ A++ ++ K+G + + ++Y ++I G
Sbjct: 260 FMKEMLANKIC--PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLING 317
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C G E +L M+ P++ Y+ LI+GF +K A + + + K +P
Sbjct: 318 LCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPN 377
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+++++ ++G E + MLD I N++ I L A E++
Sbjct: 378 VITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLN 437
Query: 252 LLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL--LFSL---KNH--HNVDID-LC--- 297
+ KG V ++ LCK K A KLL +F+L NH +N +D C
Sbjct: 438 EMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEG 497
Query: 298 ------------------------NAVILGLCEINRVLEAFGLCYELVEKGLHQELT 330
N +I G C+IN++ A GL E++EKGL+ T
Sbjct: 498 KLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRT 554
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 106/200 (53%), Gaps = 8/200 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ TFNT+I ++C G ++E + +M + + + ++Y+ LI LC++ D A++L
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
+E+ K G + +Y + LC++ K+R AE++L ++ G + + ++Y T
Sbjct: 436 LNEMENK-------GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNT 488
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C EG + + M + P+V Y+ LI G+ + +K A L +ML+
Sbjct: 489 LMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKG 548
Query: 188 YLPKTSTWHSILARLLEKGF 207
P +T+ + +LEKGF
Sbjct: 549 LNPNRTTYDIVRLEMLEKGF 568
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N LI C +L A ++ M+N + D +Y+ILI LC+
Sbjct: 406 DEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSR 465
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP- 122
AEKL +E+F G +P +Y + C GK + A V R M++ + P
Sbjct: 466 NAEKLLNEMFN-------LGLKPNHVTYNTLMDGYCMEGKLKAALNV-RTRMEKERKQPN 517
Query: 123 -LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQK 170
++Y +I G+C+ E LL ML + P+ YD + L+K
Sbjct: 518 VVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEK 566
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 136/323 (42%), Gaps = 40/323 (12%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ TFNTLI C N+ A K FE M+ + + +Y+ LI LC G ++A L
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
+D++ G +P +Y + C+ ++A +VL + K+ + +++ T
Sbjct: 331 WDKMV-------GLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNT 383
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I +C+EG E G+ L ML LP+V Y CLI G +K A E L +M
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKG 443
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
T++ ++ L + + ++ M + ++ N H
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPN---------------H----- 483
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEI 307
V ++ C GKL A + K ++ N +I G C+I
Sbjct: 484 ------------VTYNTLMDGYCMEGKLKAALNVRKRMEKERKQPNVVTYNVLIKGYCKI 531
Query: 308 NRVLEAFGLCYELVEKGLHQELT 330
N++ A GL E++EKGL+ T
Sbjct: 532 NKLEAANGLLNEMLEKGLNPNRT 554
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ TFNT+I ++C G ++E + +M + + ++Y LI LC++ D A++L
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKEL 435
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
+E+ K G + +Y + LC++ K+R AE++L ++ G + + ++Y T
Sbjct: 436 LNEMENK-------GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNT 488
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C EG + + M + P+V Y+ LI G+ + +K A L +ML+
Sbjct: 489 LMDGYCMEGKLKAALNVRKRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKG 548
Query: 188 YLPKTSTWHSILARLLEKGF 207
P +T+ + +LEKGF
Sbjct: 549 LNPNRTTYDIVRLEMLEKGF 568
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+N+LI+ C+ G L+EA+ +++ M + + +Y+ LI C++ +A
Sbjct: 303 GLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEA 362
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
K+ D++ ++E+V P ++ + C+ G + + +++ G +S
Sbjct: 363 TKVLDDVSKQELV-------PNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVST 415
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G CR+ + ELL M + DV Y+ LIDG + DK A + L +M
Sbjct: 416 YKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMF 475
Query: 185 KSSYLPKTSTWHSIL 199
P T+++++
Sbjct: 476 NLGLKPNHVTYNTLM 490
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 155/359 (43%), Gaps = 14/359 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF + N L+ + + + V++ M ++ + +++I I LC+ G +
Sbjct: 158 DYGFKLSQTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLN 217
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEH---GKTRKAERVLRQIM-KRGT 119
KAE +++ +G P +Y + C+ GK KAE +++++ +
Sbjct: 218 KAEDAIEDMKA-------WGISPKVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKIC 270
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ +++ T+I G C++ + M ++ P++ Y+ LI+G K A++
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
+KM+ P T+++++ +K E+ +V + + + N+ I+
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCK 390
Query: 240 HGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G ++ F + + ++G + ++ LC++ L A++LL D+
Sbjct: 391 EGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
N +I GLC+ ++ A L E+ GL N L+ GK++ A + KR+
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRM 509
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 162/370 (43%), Gaps = 11/370 (2%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G PD ++N LI +C +D+AL++ M D SY ++ LC+ ++
Sbjct: 296 AGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEE 355
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
++L + + + ++ P +Y + L +HG A LR+ ++G D +
Sbjct: 356 VKRLMENMVQNSNLI------PDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKV 409
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y V+ C+ + L+I M + PDV Y +IDGF + K A + L++M
Sbjct: 410 GYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
K P T T+ +L L G E+ + + + N + + L G
Sbjct: 470 YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529
Query: 244 DKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+A ++ + +KGF V I ++Q LC+ + A+K L L V++ +V
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSV 589
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
I G C+I + A + ++ H + L AL + +++EA+ + ++ G +
Sbjct: 590 IYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLG-KG 648
Query: 361 LDRSVLSYSS 370
+D + ++Y +
Sbjct: 649 IDPTPVTYRA 658
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 144/345 (41%), Gaps = 9/345 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD T+ +I C G +DEA K+ + M ++ +Y++L+ LC G +A
Sbjct: 438 GCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEA 497
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++ + V + P A +Y + L GK +A + R+++++G +P+
Sbjct: 498 REMIN-------VSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVD 550
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+I CR + L L + +V + +I GF Q A+ LE M
Sbjct: 551 INLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMY 610
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S+ P T+ ++ L +K E++ + V ML + I I G D
Sbjct: 611 LSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVD 670
Query: 245 KAFEIVE-LLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+++E ++ ++ F +V++ LC G EA KLL L+ +D C+ +I
Sbjct: 671 DMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIES 730
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
L A+ + ++ + L +L + L G EA
Sbjct: 731 YLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEA 775
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 111/254 (43%), Gaps = 10/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ N LI S C N+ A K E + + +++ +I CQ GD D A
Sbjct: 543 GFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAA 602
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ ++++ P A +Y +F L + + +A ++ +++ +G P++
Sbjct: 603 LSMLEDMYLS-------NKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVT 655
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y VI C+ G ++ +LL M+ R P +Y+ +I+ A + L K+L
Sbjct: 656 YRAVIHRFCQWGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKLCYFGNREEAEKLLGKVL 713
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+++ T H ++ L G + +V M RN+ ++ L K + L G
Sbjct: 714 RTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPA 773
Query: 245 KAFEIVELLYKKGF 258
+A +++ ++G
Sbjct: 774 EADDLMLRFVERGI 787
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 117/301 (38%), Gaps = 40/301 (13%)
Query: 88 AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLI 146
A Y + L + + A R+LR + +RG + P ++ V++ + R G N +L
Sbjct: 197 AIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILT 256
Query: 147 WMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWH---------- 196
M + PD+ I + I ++ +K A+ LE+M + P +++
Sbjct: 257 LMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVH 316
Query: 197 ------SILARLLEKGFPHESARVTVMM--------------LDRNIRQNINLSTKSIEL 236
++A + KG P + +M L N+ QN NL +
Sbjct: 317 RIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTY 376
Query: 237 ------LFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLK 287
L HGH D A + +KGF V VV CK + +A+ L++
Sbjct: 377 NTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYS 436
Query: 288 NHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
N D+ A+I G C + ++ EA + ++ + G L+ L GK E
Sbjct: 437 KGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLE 496
Query: 348 A 348
A
Sbjct: 497 A 497
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 156/355 (43%), Gaps = 13/355 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T NT+++ C GN+ A+ + M+N + ++ L+ LC+ GD A
Sbjct: 137 GLKPTVVTLNTIVNGLCVEGNVARAVCLTREMENAGYEPNGYTFGALVNGLCKIGDMVSA 196
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
++ E+ +P Y I C+ G +A + ++ ++G + L +
Sbjct: 197 VGCIRDMVERNY-------EPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKGVKGSLVT 249
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G ++ Y LL M+ + +PDV+ + L+DGF ++ L A + M+
Sbjct: 250 YNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMV 309
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++S++ E+ +V +M+ + ++ I D
Sbjct: 310 QMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVD 369
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA ++ + +G V +V C+ GK P A K L F++K + V L AV+
Sbjct: 370 KAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGK-PLAAKELFFTMKQYGMVPTLLTCAVV 428
Query: 302 L-GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
L GL + + EA L L E L ++ N ++ L GK+ +A + R+
Sbjct: 429 LDGLIKCHFRFEAMLLFRALEESDLDLDIVIYNVMIDGLCKDGKLNDARKVLARL 483
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 145/337 (43%), Gaps = 11/337 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+ P+ +N ++ C G + EAL +F M V +Y+ LI+ +C G++ KA
Sbjct: 208 YEPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAY 267
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
L +E+ EK G P ++ + C+ G +A+ V+ +++ G + + ++Y
Sbjct: 268 FLLNEMMEK-------GVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTY 320
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I G+C + ++ M+ + LP V Y+ LI G+ + AM L +M+
Sbjct: 321 NSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKAMCLLNEMVN 380
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P TW ++++ E G P + + M + + ++ L R +
Sbjct: 381 EGLYPDVVTWTTLVSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDGLIKCHFRFE 440
Query: 246 AFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A + L + + I ++ LCK GKL +ARK+L L D N +I
Sbjct: 441 AMLLFRALEESDLDLDIVIYNVMIDGLCKDGKLNDARKVLARLLVKGLRFDSYTFNIMIG 500
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
GLC + +A L ++ E G N V L
Sbjct: 501 GLCRKGLLDDAEDLLMKMEENGCQPNKCSYNIFVQGL 537
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 145/340 (42%), Gaps = 11/340 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ FN L N + + ++ +F + AD+ + +I+I LC G A +
Sbjct: 70 PNIKDFNLLFTFITKTKNYTTTISLIKHAHSFNINADTYTLNIVINCLCHLGHTKFAFSV 129
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++F K G +P + I LC G +A + R++ G + + ++
Sbjct: 130 LSQMF-------KTGLKPTVVTLNTIVNGLCVEGNVARAVCLTREMENAGYEPNGYTFGA 182
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G C+ G + + M+ R++ P+V +Y+ ++DGF + A+ +M +
Sbjct: 183 LVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKG 242
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
T++ ++ + G ++ + M+++ + ++ T ++ G +A
Sbjct: 243 VKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAK 302
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ + + G V ++ C ++ EA K+ + + N++I G
Sbjct: 303 SVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGW 362
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGK 344
C++ V +A L E+V +GL+ ++ LV+ GK
Sbjct: 363 CKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGK 402
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 8/222 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+N+LI +C +DEA+KVF M + +Y+ LI C+ D DKA
Sbjct: 312 GVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKA 371
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
L +E+ + G P ++ + CE GK A+ + + + G L
Sbjct: 372 MCLLNEMVNE-------GLYPDVVTWTTLVSGFCEVGKPLAAKELFFTMKQYGMVPTLLT 424
Query: 126 MTVIMGHCREGAYENGYELLIWMLRR-DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
V++ + + LL L D D+ IY+ +IDG + K A + L ++L
Sbjct: 425 CAVVLDGLIKCHFRFEAMLLFRALEESDLDLDIVIYNVMIDGLCKDGKLNDARKVLARLL 484
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+ T++ ++ L KG ++ + + M + + N
Sbjct: 485 VKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMKMEENGCQPN 526
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 29/221 (13%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T+N+LIH C ++D+A+ + M N + D +++ L+ C+ G A++L
Sbjct: 350 PSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKEL 409
Query: 69 F---------DELFEKEIVL-----CKFGSQPL--------------AASYKPIFQYLCE 100
F L +VL C F + + Y + LC+
Sbjct: 410 FFTMKQYGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALEESDLDLDIVIYNVMIDGLCK 469
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
GK A +VL +++ +G + D ++ +I G CR+G ++ +LL+ M P+
Sbjct: 470 DGKLNDARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMKMEENGCQPNKCS 529
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILA 200
Y+ + G L+K L + + L+ M + +T +++
Sbjct: 530 YNIFVQGLLRKRDVLRSKKYLQIMKNKGFAVDATTTELLIS 570
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 153/364 (42%), Gaps = 29/364 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD T++ +I C A +++A +FE MK + +Y+ILI + C+ G +A
Sbjct: 455 GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA 514
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
K FDE+ K G P +Y + + + A+ + ++ G + + ++
Sbjct: 515 RKWFDEMLHK-------GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVT 567
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFL-----------------PDVEIYDCLIDGF 167
Y +I GHC+ G E ++ M R D P+V Y L+DG
Sbjct: 568 YTALIDGHCKAGQIEKACQIYARM-RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGL 626
Query: 168 LQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI 227
+ ++ A E L+ ML P + +++ + G ++ V M +R N+
Sbjct: 627 CKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNL 686
Query: 228 NLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLF 284
+ I+ LF D +++ + + + E+V LCK GK EA KL+L
Sbjct: 687 YTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLK 746
Query: 285 SLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGK 344
+ N ++ A+I G + ++ + L ++ KG L+ + G
Sbjct: 747 MEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGL 806
Query: 345 VEEA 348
++EA
Sbjct: 807 LDEA 810
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 157/410 (38%), Gaps = 72/410 (17%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTAD----------------SASY 49
G P+ T+ LI HC AG +++A +++ M+ ++D +Y
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITY 619
Query: 50 SILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAER 109
L+ LC+ +A +L D + G +P Y + C+ GK + A+
Sbjct: 620 GALVDGLCKANRVKEAHELLDTMLAH-------GCEPNQIVYDAVIDGFCKIGKLQDAQE 672
Query: 110 VLRQIMKRG------------------------------------TQDPLSYMTVIMGHC 133
V ++ +RG T + + Y ++ G C
Sbjct: 673 VFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLC 732
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTS 193
+ G + Y+L++ M + P+V Y +IDGF + K +E M P
Sbjct: 733 KIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFI 792
Query: 194 TWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI------ELLFGHGHRDKAF 247
T+ ++ G E+ ++ M ++I LS + I E + G D+
Sbjct: 793 TYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHI-LSHRKIIEGFSQEFITSIGLLDELS 851
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLL--LFSLKNHHNVDIDLCNAVILGLC 305
E + + + I+ + K G+L A LL + S +H + L ++I L
Sbjct: 852 ENESVPVDSLYRILIDNYI----KAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLS 907
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
++V +A L ++ K + EL+ L L+ L K +EA +S I
Sbjct: 908 HASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSI 957
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 141/347 (40%), Gaps = 23/347 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G+ P T+N LI A LD A V M ++ D + S +LC+ G
Sbjct: 204 DFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGG--- 260
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP- 122
K + FD + E E + P Y + LCE +A +L + M+ + P
Sbjct: 261 KCREAFDLIDEAEDFV------PDTVFYNRMVSGLCEASLFEEAMDILHR-MRSSSCIPN 313
Query: 123 -LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y ++ G R+G +L M+ P+ EI++ LI + + A + +
Sbjct: 314 VVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFK 373
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM------MLDRNIRQN-INLSTKSI 234
KM+K P ++ + + S + ++ MLD + N +N+S +
Sbjct: 374 KMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA- 432
Query: 235 ELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHN 291
L G G D+AF+I+ + KGF +V+ FLC K+ +A L +N
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIV 492
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
+ +I C+ + +A E++ KG + L+ A
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHA 539
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 126/349 (36%), Gaps = 64/349 (18%)
Query: 50 SILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAER 109
+ L+R C+ G ++ A E+ L FG +P +Y + Q K A
Sbjct: 180 NFLVRKCCRNGWWNMA-------LEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYL 232
Query: 110 VLRQ------IMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCL 163
V R+ +M R T +Y G CRE ++L+ DF+PD Y+ +
Sbjct: 233 VKREMLSYAFVMDRYTLSCFAYSLCKGGKCREA-----FDLIDEA--EDFVPDTVFYNRM 285
Query: 164 IDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+ G + AM+ L +M SS +P T+ +L+ L KG R+ MM+
Sbjct: 286 VSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGC 345
Query: 224 RQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG--------------FC---------- 259
N + I A+++ + + K G C
Sbjct: 346 YPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDI 405
Query: 260 --------------------VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
V + + LC GK +A K++ + D +
Sbjct: 406 LDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSK 465
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
VI LC+ ++V +AF L E+ G+ + L+ + G +++A
Sbjct: 466 VIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA 514
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 11/280 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SPD T+N LI C G L +A+ +F M + D +++IL+ C+ G +A+
Sbjct: 73 ISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAK 132
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+ ++ K G +P +Y + C K KA+ + + + G D SY
Sbjct: 133 NVL-------AMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSY 185
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+ + L M R +PDV Y+ LIDG + K A++ +++M
Sbjct: 186 SILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHD 245
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ SIL L + ++ + + D+ IR N+ T I+ L G +
Sbjct: 246 RGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLED 305
Query: 246 AFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
A I E L KG+ + + ++ C +G EA LL
Sbjct: 306 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 345
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 8/220 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG +PD +++ LI+ C DEA+ +FE M ++ D +Y+ LI LC+ G
Sbjct: 176 GGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISY 235
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
A KL DE+ ++ G P +Y I LC++ + KA +L + +G + +
Sbjct: 236 ALKLVDEMHDR-------GVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMY 288
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I G C+ G E+ + + +L + + V Y +I GF K A+ L KM
Sbjct: 289 TYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 348
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+S P T+ I+ L +K ++ ++ M+ R +
Sbjct: 349 KDNSCFPNALTYEIIIRSLFDKDENDKAEKLLREMITRGL 388
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 8/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T++ L+ +C +++A +F M V D SYSILI LC+ D+A
Sbjct: 142 GMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEA 201
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF+E+ ++I+ P +Y + LC+ GK A +++ ++ RG D ++
Sbjct: 202 MNLFEEMHCRKII-------PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 254
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ C+ + LL + + P++ Y LIDG + + A E +L
Sbjct: 255 YSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 314
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y +T+ ++ KG E+ + M D + N I LF D
Sbjct: 315 VKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDKDEND 374
Query: 245 KAFEIVELLYKKGF 258
KA +++ + +G
Sbjct: 375 KAEKLLREMITRGL 388
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 138/343 (40%), Gaps = 32/343 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D ++ TLI+ C G AL++ + V Y+ +I +C+ + A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDA 61
Query: 66 EKLFDELFEKEIV------------LCKFGS----------------QPLAASYKPIFQY 97
L+ E+ K I C G P ++ +
Sbjct: 62 FDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDA 121
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
C+ GK ++A+ VL +MK+G + + ++Y ++ G+C + M + PD
Sbjct: 122 FCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPD 181
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y LI+G + AM E+M +P T++S++ L + G + ++
Sbjct: 182 IHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVD 241
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRG 273
M DR + +I + ++ L + DKA ++ L +G + ++ LCK G
Sbjct: 242 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGG 301
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
+L +A + L +N+ ++ +I G C EA L
Sbjct: 302 RLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALAL 344
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+N+LI C +G + ALK+ + M + V D +YS ++ LC+ DKA L
Sbjct: 215 PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 274
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
L ++ G +P +Y + LC+ G+ A + ++ +G + +Y
Sbjct: 275 LTNLKDQ-------GIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 327
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C +G ++ LL M P+ Y+ +I KD+ A + L +M+
Sbjct: 328 MIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDKDENDKAEKLLREMITRG 387
Query: 188 YL 189
L
Sbjct: 388 LL 389
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 4/264 (1%)
Query: 89 ASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMTVIMGHCREGAYENGYELLIW 147
SY + LC+ G+TR A ++LR++ + Q + Y T+I G C++ + ++L
Sbjct: 8 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M+ + PDV Y+ LI GF K A+ KM + P T++ ++ ++G
Sbjct: 68 MVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGK 127
Query: 208 PHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE--- 264
E+ V MM+ + ++ N+ + ++ +KA I + + G I
Sbjct: 128 MKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSI 187
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
++ LCK EA L D+ N++I GLC+ ++ A L E+ ++G
Sbjct: 188 LINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 247
Query: 325 LHQELTCLNDLVTALEARGKVEEA 348
+ ++ + ++ AL +V++A
Sbjct: 248 VPPDIITYSSILDALCKNHQVDKA 271
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 28/143 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+++++ + C +D+A+ + N+K+ + + +Y+ILI LC+ G +
Sbjct: 245 DRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLE 304
Query: 64 KAEKLFDELFEK---------EIVLCKFGSQ-------------------PLAASYKPIF 95
A +F++L K +++ F ++ P A +Y+ I
Sbjct: 305 DAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
+ L + + KAE++LR+++ RG
Sbjct: 365 RSLFDKDENDKAEKLLREMITRG 387
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G++ T+ +IH C+ G DEAL + MK+ ++ +Y I+IR+L + + DKA
Sbjct: 317 GYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDKDENDKA 376
Query: 66 EKLFDELFEKEIV 78
EKL E+ + ++
Sbjct: 377 EKLLREMITRGLL 389
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 11/320 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ ++T+I S C +++A ++ M + +++ D +YS LI C G A L
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDL 255
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+ + I P ++ + C+ GK R+A+ VL +MK+ + D ++Y +
Sbjct: 256 FNRMISDNI-------NPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNS 308
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C L M +R PDV Y +I+GF + AM+ E+M
Sbjct: 309 LMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQ 368
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T++S++ L + G + + M DR NI ++ + + H DKA
Sbjct: 369 IFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAI 428
Query: 248 EIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ + +KG I ++ LCK G+L +A+K+ L ++ +I ++I G
Sbjct: 429 VLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGF 488
Query: 305 CEINRVLEAFGLCYELVEKG 324
C E + ++ + G
Sbjct: 489 CNKGFFDEGLAMLSKMKDNG 508
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 159/354 (44%), Gaps = 11/354 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T N L++ G++ + VF + D+ +++ILI+ LC +G+ KA
Sbjct: 88 GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D++ + G Q SY + LC G+T+ A ++LR++ + + + +
Sbjct: 148 LYFHDKVVAQ-------GFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVM 200
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C++ + ++L M+ + PDV Y LI GF K A++ +M+
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ ++ ++G E+ V +M+ +N++ ++ ++ +
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVN 320
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA + ++ ++G + ++ CK + EA KL ++ N+++
Sbjct: 321 KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLV 380
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
GLC+ R A L E+ ++G + N ++ A+ V++A + +I
Sbjct: 381 DGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKI 434
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 8/250 (3%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D T+N+L+ +C +++A +F M VT D SYSI+I C+ D+A KLF
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLF 361
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTV 128
+E+ K+I P +Y + LC+ G+T A ++ ++ RG + ++Y ++
Sbjct: 362 EEMHCKQIF-------PNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSI 414
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ C+ + LL + + PD+ Y LI+G + + A + E +L Y
Sbjct: 415 LDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGY 474
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
P T+ S++ KGF E + M D N I LF DKA +
Sbjct: 475 SPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEK 534
Query: 249 IVELLYKKGF 258
++ + +G
Sbjct: 535 LLREMIARGL 544
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD +++ +I+ C +DEA+K+FE M Q+ + +Y+ L+ LC+ G A
Sbjct: 333 GVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCA 392
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L DE+ ++ G +Y I +C++ KA +L +I ++G Q D +
Sbjct: 393 LELVDEMHDR-------GQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFT 445
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G ++ ++ +L + + P++ Y LI+GF K + L KM
Sbjct: 446 YTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+ +P T+ ++ L EK ++ ++ M+ R +
Sbjct: 506 DNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 43/187 (22%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G + T+N+++ + C ++D+A+ + +K + D +Y++LI LC+ G D
Sbjct: 401 DRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLD 460
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKP-IFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
A+K+F++L L Y P I+ Y
Sbjct: 461 DAQKVFEDL--------------LVKGYSPNIYTY------------------------- 481
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++I G C +G ++ G +L M +P+ Y+ LI +KD+ A + L +
Sbjct: 482 ---TSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLRE 538
Query: 183 MLKSSYL 189
M+ L
Sbjct: 539 MIARGLL 545
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 154/347 (44%), Gaps = 24/347 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+T TFNTLI +C G +DEA ++ M A+ +Y+ L+ LC G + A+++
Sbjct: 222 PNTVTFNTLIDGYCKVGGIDEAFRLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRV 281
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
E+ K + F S +F G + GTQ D +
Sbjct: 282 LLEMERKGFLPRGFSSL--------VFDDQLMSGNENGL------LNGNGTQVDEWTCNA 327
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G C+ G E E+L + +P Y+ L++ + QK + T E+M K
Sbjct: 328 LLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEKRG 387
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR---D 244
P T+++++ + E G +++ R M+++ + + L+ G+G
Sbjct: 388 LKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYN---SLINGYGMTCDFV 444
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+ FEI E + KG ++ ++ LCK GKL +A +L + + + D+ N +I
Sbjct: 445 RCFEIFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLI 504
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C +++ +AF E+++ G+ + N L+ + G+V EA
Sbjct: 505 EASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEA 551
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 153/349 (43%), Gaps = 10/349 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P ++N L++++C G+L++ + E M+ + +++ LI C+ GD ++A
Sbjct: 352 GVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEKRGLKPSYVTFNTLINKFCETGDLNQA 411
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
E+ ++ EK G P +Y + + + +I +G + + S
Sbjct: 412 ERWVKKMIEK-------GVSPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVKS 464
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I C++G + +L M+ R P+ +IY+ LI+ KP A L +M+
Sbjct: 465 YGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNEMI 524
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ T+++++ + + G E+ + + M + + ++ + + G+ +
Sbjct: 525 QNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMTRKGYKPDVITYNSLMSVYAMSGNPE 584
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFL--CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
K E+ + + K+G I + C++ + K+ L D + N +I
Sbjct: 585 KCLELYDNMKKRGIKPSIGTFHPLINSCRKKGVVTMEKMFQEMLGMKLIPDRAVYNEMIY 644
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
G E VL+A L ++V++G+ + N L+ A +V E I
Sbjct: 645 GYAEDGNVLKAMSLHQQMVDQGIDSDKVTYNCLILAHLRDQRVSEIKHI 693
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 112/275 (40%), Gaps = 29/275 (10%)
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRD 152
+ Q L + +KA + + + G + D +Y ++ +EL+ M +
Sbjct: 125 LLQSLVDLRHFQKAITLFNDVAESGVRPDSFAYGKAVLSAAMLKDLNKCFELINLMEKDG 184
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
P +Y+ ++ G + K A + ++M++ + +P T T+++++ + G E+
Sbjct: 185 IRPTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDEAF 244
Query: 213 RVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKR 272
R+ M + N+ + L G G + A ++ + +KGF
Sbjct: 245 RLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRVLLEMERKGF-------------- 290
Query: 273 GKLPEARKLLLF----------SLKNHHNVDID--LCNAVILGLCEINRVLEAFGLCYEL 320
LP L+F L N + +D CNA++ GLC++ +V +A + +L
Sbjct: 291 --LPRGFSSLVFDDQLMSGNENGLLNGNGTQVDEWTCNALLNGLCKVGKVEKAKEILAKL 348
Query: 321 VEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
G+ N LV A +G + + ++ +
Sbjct: 349 ESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEM 383
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD ++ +I+ C LDEA+ +FE M + +T D +YS LI LC+ G A
Sbjct: 333 GMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISA 392
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
KLFDE+ ++ G P +Y + LC+ +T KA +L ++ +G Q D +
Sbjct: 393 WKLFDEMLDR-------GQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFT 445
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C++G ++ ++ +L + + DV Y+ +I+G ++ A+ L KM
Sbjct: 446 YNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKME 505
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+P T+ I+ L KG ++ ++ M+ R +
Sbjct: 506 AKGCIPDAITYEIIIRALFGKGVNDKAEKLLREMIARGL 544
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 159/346 (45%), Gaps = 11/346 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F PD ++ +I + C ++++A ++ M +++ D +Y+ LI C G +
Sbjct: 194 FRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVF 253
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM 126
L +E+ K I P ++ + L + GK ++A+ ++ +MK G + +
Sbjct: 254 VLLNEMVLKNI-------NPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTY 306
Query: 127 TVIM-GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+V+M G+C ++ M++R PD++ Y +I+G + A+ E+M
Sbjct: 307 SVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHS 366
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
++ T+ S++ L + G + ++ MLDR ++ ++ L DK
Sbjct: 367 TNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDK 426
Query: 246 AFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A ++ + +G I ++ LCK G+L +A+K+ L +NVD+ N +I
Sbjct: 427 AIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMIN 486
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
GLC+ + + EA L ++ KG + ++ AL +G ++A
Sbjct: 487 GLCKESLLDEALTLLSKMEAKGCIPDAITYEIIIRALFGKGVNDKA 532
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 157/349 (44%), Gaps = 14/349 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSASYSILIRNLCQRGDYD 63
G PD FNTLI C ++ EAL + + + FQ++ SY LI LC+ G
Sbjct: 122 GCHPDVIIFNTLIKGLCLNNDVKEALHFHDKLVAQGFQLS--KVSYGTLINGLCKVGQTQ 179
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDP 122
A +L + E++++ +P Y I LC+ A + +++ KR + D
Sbjct: 180 AALQLLRRI-ERQLLF-----RPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDV 233
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y ++I G C G + + LL M+ ++ PDV ++ L+D ++ K A +
Sbjct: 234 FTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAV 293
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M+K P T+ ++ +++ + M+ R + +I T I L
Sbjct: 294 MMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKM 353
Query: 243 RDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
D+A + E ++ + + ++ LCK G+L A KL L D+ N+
Sbjct: 354 LDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNS 413
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ LC+ ++ +A L ++ ++G+ ++ N L+ L G++++A
Sbjct: 414 LLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDA 462
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 164/354 (46%), Gaps = 19/354 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T + LI+ + + A +F + D ++ LI+ LC D +A
Sbjct: 90 PSIVTLSILINCYSHLRQMKFAFSLFGKILKMGCHPDVIIFNTLIKGLCLNNDVKEALHF 149
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR--GTQDPLSYM 126
D+L + G Q SY + LC+ G+T+ A ++LR+I ++ D + Y
Sbjct: 150 HDKLVAQ-------GFQLSKVSYGTLINGLCKVGQTQAALQLLRRIERQLLFRPDVVMYS 202
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I C++ + ++L M+R+ PDV Y LI GF + L +M+
Sbjct: 203 IIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLK 262
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---GHR 243
+ P T+++++ L ++G E+ + +M+ + NI T S+ L+ G+
Sbjct: 263 NINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNI--VTYSV-LMDGYCLVNEV 319
Query: 244 DKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+KA +I + ++G I+ ++ LCK L EA L + +D+ +++
Sbjct: 320 NKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSL 379
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA-AFISK 353
I GLC+ R++ A+ L E++++G ++ N L+ AL + ++A A +SK
Sbjct: 380 INGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSK 433
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 28/143 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+N+L+ + C + D+A+ + MK+ + AD +Y+ILI LC+ G D
Sbjct: 401 DRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCKDGRLD 460
Query: 64 KAEKLFDELFEK----EIV--------LCK----------------FGSQPLAASYKPIF 95
A+K+F +L K ++V LCK G P A +Y+ I
Sbjct: 461 DAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKMEAKGCIPDAITYEIII 520
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
+ L G KAE++LR+++ RG
Sbjct: 521 RALFGKGVNDKAEKLLREMIARG 543
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 168/384 (43%), Gaps = 50/384 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NT++ C G +DEA+++ + M++F++ D +Y+ LI + D A
Sbjct: 311 GMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAA 370
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
KL +E+ + G + ++ + ++ C GK +A V+ ++++ G + D +
Sbjct: 371 FKLVEEMKAR-------GVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFT 423
Query: 125 YMTVIMGHCREGAYENGYELLIWMLR---------------------------------- 150
Y T+I G+C+ G Y+++ M R
Sbjct: 424 YNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKAR 483
Query: 151 -RDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
R ++ D Y LI G+ + ++ A++ E+M ++ + T+++I+ L G
Sbjct: 484 KRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTD 543
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE----IVELLYKKG-FCVKIEE 264
++ +L++ + + + S I G +KAF+ +VE K F I
Sbjct: 544 QAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNI-- 601
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
+++ LC+ G L + L + +D N +I C+ R+ +AF L E+ K
Sbjct: 602 LLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKN 661
Query: 325 LHQELTCLNDLVTALEARGKVEEA 348
L + N +VT L G+ EEA
Sbjct: 662 LEPDRYTYNAIVTGLTKAGRTEEA 685
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 153/349 (43%), Gaps = 13/349 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ TFN LIH +CS N +EAL++ M + D+ +Y+ ++ LC+R +
Sbjct: 206 GVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQV 265
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
L ++ G P +Y + C+ ++A V+ + +G D +
Sbjct: 266 RDLLLQMKNS-------GLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWT 318
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G C EG + L M +PDV Y+ LIDG + A + +E+M
Sbjct: 319 YNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEM- 377
Query: 185 KSSYLPKTSTWHSILARLL-EKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
K+ + + H+I+ + +G E++ V V M++ + I G
Sbjct: 378 KARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKM 437
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+A+++++ + +KG + ++ +C +L +A L + + K + +D +
Sbjct: 438 AEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTL 497
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
I+G + + A L E+ E G+ + N ++ L GK ++A
Sbjct: 498 IMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAV 546
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 166/367 (45%), Gaps = 21/367 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK G F P+ T+N L+H +C L EA +V E M + D +Y+ ++R LC G
Sbjct: 272 MKNSGLF-PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT- 119
D+A +L D++ ++V P +Y + EH + A +++ ++ RG
Sbjct: 331 KIDEAVRLRDKMESFKLV-------PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVK 383
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
++ +++ +I C EG + +++ M+ F PD Y+ +I+G+ + K A +
Sbjct: 384 ENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKM 443
Query: 180 LEKMLKSSYLPKTSTWHSILARL-LEKGFPHESARVTVMMLDRN-IRQNINLSTKSIELL 237
+++M + T T +++L + LEK ++ +T+ R I + T I
Sbjct: 444 MDEMGRKGLKLDTFTLNTLLHTMCLEKQL-DDAYTLTMKARKRGYILDEVTYGT-LIMGY 501
Query: 238 FGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
F D+A ++ E + + G I +++ LC GK +A L L+ D
Sbjct: 502 FKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDE 561
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA-----A 349
N +I G C V +AF ++VE L ++ N L+ L G +E+
Sbjct: 562 STSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNT 621
Query: 350 FISKRIP 356
+ISK P
Sbjct: 622 WISKGKP 628
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 150/327 (45%), Gaps = 8/327 (2%)
Query: 32 KVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASY 91
++F MK + + + + L+ L R + + E+F+ + K G QP ++
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALV-RSNSSHSLVFSREVFQDAV---KLGVQPNVNTF 214
Query: 92 KPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMGHCREGAYENGYELLIWMLR 150
+ C T +A R++ Q+ + G D ++Y TV+ C+ +LL+ M
Sbjct: 215 NILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKN 274
Query: 151 RDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHE 210
P+ Y+ L+ G+ + A E +E M LP T+++++ L ++G E
Sbjct: 275 SGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDE 334
Query: 211 SARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQ 267
+ R+ M + ++ I+ F H D AF++VE + +G V +++
Sbjct: 335 AVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIK 394
Query: 268 FLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQ 327
+ C GK+ EA +++ +++ + D N +I G C+ ++ EA+ + E+ KGL
Sbjct: 395 WFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKL 454
Query: 328 ELTCLNDLVTALEARGKVEEAAFISKR 354
+ LN L+ + ++++A ++ +
Sbjct: 455 DTFTLNTLLHTMCLEKQLDDAYTLTMK 481
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 29/278 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ D T+ TLI + D ALK++E MK + A +Y+ +IR LC G D+A
Sbjct: 486 GYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQA 545
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+EL EK +V P ++ I C G KA + ++++ + D +
Sbjct: 546 VDKLNELLEKGLV-------PDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFT 598
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ G CREG E G L + + D Y+ +I F ++ + A + + +M
Sbjct: 599 CNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEME 658
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+++I+ L + G E+ ++ + ++ Q + S EL G D
Sbjct: 659 GKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKG--QQVKTQDTSPEL----GTSD 712
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLL 282
+ E + LC +GK +A KL
Sbjct: 713 MMY---------------SEQISSLCTQGKYKDAMKLF 735
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 33/343 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD T+NT+I+++C G ++AL + MK++ + ++ +Y+ILI LC+ G +KA
Sbjct: 665 GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKA 724
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLR---QIMKRGTQDP 122
E DE+ E V P ++K + + + ++ KA+++L+ +++ G +
Sbjct: 725 ESALDEMLVMEFV-------PTPITHKFLVK---AYSRSEKADKILQIHEKLVASGLELS 774
Query: 123 LS-YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
L+ Y T+I CR G +L M++R D+ Y+ LI G+ A++T
Sbjct: 775 LTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYS 834
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL---F 238
+M P +T++++L L G E T ++ + + + + ++L +
Sbjct: 835 QMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY 894
Query: 239 GH-GHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL--LFS---LKNH 289
G G+R K + + KGF ++ ++ K GK+ EAR+LL L + + N
Sbjct: 895 GRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNS 954
Query: 290 HNVDIDLCNAVILGL-CEINRVL------EAFGLCYELVEKGL 325
DI C + L EI+R L E L E+ KGL
Sbjct: 955 FTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGL 997
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 11/353 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
P T+ TLI ++C ++E+ +++ M + D + S ++ C+ G +A
Sbjct: 317 LQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAA 376
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
LF E++E G P SY I L + G+ +A + Q++ RG D ++
Sbjct: 377 VLFREMYE-------MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTC 429
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
TV+ G + G + E+ +L+ + P+ Y L+DG+ + K LA L+KM K
Sbjct: 430 TTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEK 489
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ SI+ +KG ++ V M+ RN+ N + I+ F G +D
Sbjct: 490 EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDV 549
Query: 246 AFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A + + + + V + ++ L + G++ EAR L++ + DI ++I
Sbjct: 550 ADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLID 609
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
G + L A + E+ EK + ++ N L+ L GK + S+ I
Sbjct: 610 GYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMI 662
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 136/354 (38%), Gaps = 22/354 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD + +LI + GN AL + + MK + D +Y+ LI+ L + G YD
Sbjct: 596 GIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-P 654
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ + E G P +Y I C GKT A +L ++ G + ++
Sbjct: 655 RYVCSRMIE-------LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVT 707
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ GA E L ML +F+P + L+ + + +K ++ EK++
Sbjct: 708 YNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLV 767
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S + +++++ G ++ V M+ R I ++ I H +
Sbjct: 768 ASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVE 827
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEA--------RKLLLFSLKNHHNVDIDL 296
KA + ++ G I L G L A L S N + +
Sbjct: 828 KALKTYSQMFVDGIAPNITTYNTLL---GGLSNAGLMEEMMEETEKLVSEMNERGLVPNA 884
Query: 297 CNAVIL--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
IL G + + L E++ KG L N L++ GK+ EA
Sbjct: 885 ATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEA 938
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 146/367 (39%), Gaps = 51/367 (13%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE--- 66
D T+NT+I C G +D+ + M + DS + +IL++ C+ G AE
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220
Query: 67 -KLFDELFEKEIV--------LCKFGSQPLA----------------ASYKPIFQYLCEH 101
L D K+++ C+ G A +Y + + C+
Sbjct: 221 YNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKT 280
Query: 102 GKTRKAERVLRQIMKRG------------TQDPL--------SYMTVIMGHCREGAYENG 141
G +AE + +I+ TQ+ + +Y T+I +C+ E
Sbjct: 281 GDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEES 340
Query: 142 YELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILAR 201
+ L M+ +PDV ++ GF + K A +M + P ++ +I+
Sbjct: 341 HSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINS 400
Query: 202 LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF--- 258
L + G E+ + M+ R I +I T ++ LF G +A E+ E + K
Sbjct: 401 LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 460
Query: 259 CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCY 318
CV ++ CK GK+ A +L K H ++ +++I G + + +A +
Sbjct: 461 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520
Query: 319 ELVEKGL 325
E+V++ +
Sbjct: 521 EMVQRNV 527
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 165/392 (42%), Gaps = 41/392 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P +NTL++ ++G + + ++ +M V D S ++L+ +LC+ GD D A
Sbjct: 89 GLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLA 148
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
L ++V +Y + C+ G + +L +++KRG D ++
Sbjct: 149 ---LGYLRNNDVVDID------NVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ G+CR G + ++ ++ DV + LIDG+ + A E +E
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSW 259
Query: 185 KSSYLPKTSTWHSILARLLEK--------------GFPHESARV-TVMMLDRNIRQNINL 229
+S T++++L + GF + R+ ++ +N +N+
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQP 319
Query: 230 STKSIELLFGHGHRDKAFEIVELLYKKGF-------CVKIEEVVQFLCKRGKLPEA---- 278
+ + L + E LYKK V ++ C+ GKL EA
Sbjct: 320 TLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLF 379
Query: 279 RKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
R++ L +H + N+ L + RV+EAF L ++V +G+ ++ ++
Sbjct: 380 REMYEMGLDPNHVSYATIINS----LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435
Query: 339 LEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
L GK +EA + + I L NL + ++YS+
Sbjct: 436 LFKVGKTKEAEEVFETILKL-NLAPNCVTYSA 466
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 14/328 (4%)
Query: 25 GNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGS 84
G LD+A+ +F + + DS +++ILIR C G+ D+A + +++ FG
Sbjct: 177 GRLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRN-------FGC 229
Query: 85 QPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYEL 144
P SY + LC +A +L++I + + +SYM VI G+C+ + +
Sbjct: 230 CPDVVSYNTLMTGLCRVNDVDRARDLLKEI---NSPNDVSYMIVISGYCKLSNMKEASSI 286
Query: 145 LIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLE 204
M+R P V ++ LIDGF++ A++ +KM+ P T+ S++
Sbjct: 287 FNEMVRSGVQPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVTFTSLIDGYCR 346
Query: 205 KGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVK--- 261
G + M RN N+ + I L +A E++ LL + +
Sbjct: 347 VGQVDYGLELWNEMKARNFSANLYTYSIIISALCKSNRLQEAHELLRLLNQSEIVPQAFI 406
Query: 262 IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELV 321
V+ CK G + EA +++ ++ D +I+G C R EA G+ Y ++
Sbjct: 407 YNPVIDGYCKSGNVDEANAIVV-DMEKKCKPDKLTFTILIIGHCMKGRAYEAIGIFYRML 465
Query: 322 EKGLHQELTCLNDLVTALEARGKVEEAA 349
G + + L + L G EAA
Sbjct: 466 ATGCSPDDVTIRTLSSCLLKSGMPTEAA 493
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 35/311 (11%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D+ TFN LI C AG +DEA + +M+NF D SY+ L+ LC+ D D+A L
Sbjct: 197 DSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPDVVSYNTLMTGLCRVNDVDRARDLL 256
Query: 70 DELFEKEIV--------LCKF----------------GSQPLAASYKPIFQYLCEHGKTR 105
E+ V CK G QP AS+ + + G
Sbjct: 257 KEINSPNDVSYMIVISGYCKLSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGDIS 316
Query: 106 KAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI 164
A + ++++ G D +++ ++I G+CR G + G EL M R+F ++ Y +I
Sbjct: 317 SAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSIII 376
Query: 165 DGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR 224
+ ++ A E L + +S +P+ ++ ++ + G E+ + V M +
Sbjct: 377 SALCKSNRLQEAHELLRLLNQSEIVPQAFIYNPVIDGYCKSGNVDEANAIVVDMEKKCKP 436
Query: 225 QNINLSTKSIELLFGHGHRDKAFEIVELLYK--KGFC----VKIEEVVQFLCKRGKLPEA 278
+ + L+ GH + +A+E + + Y+ C V I + L K G EA
Sbjct: 437 DKLTFTI----LIIGHCMKGRAYEAIGIFYRMLATGCSPDDVTIRTLSSCLLKSGMPTEA 492
Query: 279 RKLLLFSLKNH 289
++ KN
Sbjct: 493 ARVKEILFKNQ 503
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 44/210 (20%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TF +LI +C G +D L+++ MK +A+ +YSI+I LC+ +A
Sbjct: 329 GCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSIIISALCKSNRLQEA 388
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+L L + EIV P A Y P+ C+ G +A ++ + K+ D L++
Sbjct: 389 HELLRLLNQSEIV-------PQAFIYNPVIDGYCKSGNVDEANAIVVDMEKKCKPDKLTF 441
Query: 126 MTVIMGHCREG-AYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+I+GHC +G AYE A+ +ML
Sbjct: 442 TILIIGHCMKGRAYE------------------------------------AIGIFYRML 465
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARV 214
+ P T ++ + LL+ G P E+ARV
Sbjct: 466 ATGCSPDDVTIRTLSSCLLKSGMPTEAARV 495
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 150/320 (46%), Gaps = 11/320 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +NT+I S C ++EA ++ M + ++ D +YS LI C G + A L
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGL 253
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+++ +EI P ++ + C+ G+ ++A+ VL +MK+G + D ++Y +
Sbjct: 254 FNKMISEEI-------NPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCS 306
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C + M + +V+ Y+ +I+GF + K AM ++M +
Sbjct: 307 LMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN 366
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+P T++S++ L + G + ++ M DR + + ++ L + DKA
Sbjct: 367 IIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAI 426
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ + +G + ++ LCK G+L +A+ + L +N+ + +I G
Sbjct: 427 ALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGF 486
Query: 305 CEINRVLEAFGLCYELVEKG 324
C+ + +A L ++ + G
Sbjct: 487 CDNDLFDKALALLSKMEDNG 506
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 154/352 (43%), Gaps = 21/352 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + D TFN LI+ G+ + VF N+ ++ + + LI+ LC +G +A
Sbjct: 86 GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D++ G Y + LC+ G+T A ++LR++ + Q + +
Sbjct: 146 LHFHDKVVA-------LGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVM 198
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C+ ++L M+ + PDV Y LI GF K A+ KM+
Sbjct: 199 YNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMI 258
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---G 241
P T+ ++ ++G E+ V MM+ + I+ ++ L+ G+
Sbjct: 259 SEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDV---VTYCSLMDGYCLVK 315
Query: 242 HRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDL 296
+KA I + + G ++ ++ CK K+ EA LF + N+ D+
Sbjct: 316 QVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMN--LFKEMHCKNIIPDVVT 373
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N++I GLC+ ++ A L E+ ++G+ + N ++ AL +V++A
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 425
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 11/281 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD T++ LI C G L++A+ +F M + ++ D ++SIL+ C+ G +A
Sbjct: 226 GISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEA 285
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ + + ++ G +P +Y + C + KA+ + + + G T + S
Sbjct: 286 KNVLAMMMKQ-------GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQS 338
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ + L M ++ +PDV Y+ LIDG + K A++ +++M
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH 398
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
T++SIL L + ++ + M D I+ ++ T I+ L G
Sbjct: 399 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
A I E L KG+ + + ++Q C +A LL
Sbjct: 459 DAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALL 499
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG + + ++N +I+ C +DEA+ +F+ M + D +Y+ LI LC+ G
Sbjct: 330 GGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISY 389
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A KL DE+ ++ G +Y I LC++ + KA +L ++ G Q D
Sbjct: 390 ALKLVDEMHDR-------GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMY 442
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I G C+ G ++ + +L + + V Y +I GF D A+ L KM
Sbjct: 443 TYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKM 502
Query: 184 LKSSYLPKTSTWHSILARLLEK 205
+ +P T+ I+ L EK
Sbjct: 503 EDNGCIPNAKTYEIIILSLFEK 524
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 145/350 (41%), Gaps = 11/350 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ T TLI C G + +AL + + + Y LI LC+ G A
Sbjct: 121 GYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAA 180
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+L + K + QP Y I +C+ +A + +++ +G + D ++
Sbjct: 181 LQLLRRVDGKLV-------QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G + L M+ + PDV + L+DGF ++ + A L M+
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T+ S++ +++ + M + N+ I D
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + ++ K V ++ LCK GK+ A KL+ D N+++
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
LC+ ++V +A L ++ ++G+ ++ L+ L G++++A I
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNI 463
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+N+LI C +G + ALK+ + M + V D +Y+ ++ LC+ DKA L
Sbjct: 369 PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 428
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
++ ++ G QP +Y + LC+ G+ + A+ + ++ +G + +Y
Sbjct: 429 LTKMKDE-------GIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTV 481
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C ++ LL M +P+ + Y+ +I +KD+ +A + L +M+
Sbjct: 482 MIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541
Query: 188 YL 189
L
Sbjct: 542 LL 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 28/143 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G D T+N+++ + C +D+A+ + MK+ + D +Y+ILI LC+ G
Sbjct: 399 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458
Query: 64 KAEKLF------------------------DELFEKEIVLCK----FGSQPLAASYKPIF 95
A+ +F ++LF+K + L G P A +Y+ I
Sbjct: 459 DAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
L E + AE++LR+++ RG
Sbjct: 519 LSLFEKDENDMAEKLLREMIARG 541
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 46/323 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD T++ LI C G L +A+ +F M + D +++IL+ C+ G +
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ +FD + ++ G +P +Y + C + KA+ + + + G D S
Sbjct: 315 KTVFDMMMKQ-------GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ ++ L M R++ +PDV Y LIDG + + A++ +++M
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T++SIL L + H+ D
Sbjct: 428 DRGVPPNICTYNSILDALCKT---HQV--------------------------------D 452
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA ++ KGF I +++ LC+ GKL +ARK+ L +N+D+ +I
Sbjct: 453 KAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMI 512
Query: 302 LGLCEINRVLEAFGLCYELVEKG 324
G C EA L ++ + G
Sbjct: 513 QGFCVEGLFNEALALLSKMEDNG 535
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 147/347 (42%), Gaps = 41/347 (11%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +NT+I S C ++EA +F M + ++ D +YS LI C G A L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+++ + I +P ++ + C+ GK ++ + V +MK+G + + ++Y +
Sbjct: 283 FNKMILENI-------KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C + M + PD++ Y +I+GF + K AM ++M + +
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+P T+ S++ L + G + ++ M DR + NI ++ L DKA
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEI 307
++ KGF DI + +I GLC+
Sbjct: 456 ALLTKFKDKGF--------------------------------QPDISTYSILIKGLCQS 483
Query: 308 NRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA-AFISK 353
++ +A + +L+ KG + ++ ++ G EA A +SK
Sbjct: 484 GKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSK 530
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 152/349 (43%), Gaps = 15/349 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TF TL C G + +A + + D SY LI LC+ G+ A
Sbjct: 150 GYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L + + +V QP Y I +C+ +A + +++ +G + D ++
Sbjct: 210 LDLLQRV-DGNLV------QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVT 262
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G ++ +L M+ + PDV ++ L++ F + K + M+
Sbjct: 263 YSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T++S++ +++ + M + +I + I D
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NA 299
+A + + +++K V ++ L K G++ A +L+ + V ++C N+
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV--DQMHDRGVPPNICTYNS 440
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ LC+ ++V +A L + +KG +++ + L+ L GK+E+A
Sbjct: 441 ILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDA 489
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 151/349 (43%), Gaps = 15/349 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ N LI+ C G + A VF + D+ +++ L + LC +G +A
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA 174
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LF ++V F + SY + LC+ G+TR A +L+++ Q + +
Sbjct: 175 F-----LFHDKVVALGFHFDQI--SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C+ ++L M+ + PDV Y LI GF K A++ KM+
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ ++ + G E V MM+ + I+ N ++ +
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNA 299
KA I + + G I+ ++ CK K EA LF + N+ D+ ++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN--LFKEMHRKNIIPDVVTYSS 405
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I GL + R+ A L ++ ++G+ + N ++ AL +V++A
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKA 454
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
GG +PD +++ +I+ C DEA+ +F+ M + D +YS LI L + G
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
A +L D++ ++ G P +Y I LC+ + KA +L + +G Q
Sbjct: 417 SYALQLVDQMHDR-------GVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPD 469
Query: 123 LS-YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+S Y +I G C+ G E+ ++ +L + + DV Y +I GF + A+ L
Sbjct: 470 ISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLS 529
Query: 182 KMLKSSYLPKTSTWHSILARLLEK 205
KM + +P T+ I+ L +K
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKK 553
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 50/202 (24%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ CT+N+++ + C +D+A+ + K+ D ++YSILI+ LCQ G +
Sbjct: 428 DRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLE 487
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
A K+F++L ++K D
Sbjct: 488 DARKVFEDL-----------------------------------------LVKGYNLDVY 506
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I G C EG + LL M +PD + Y+ +I +KD+ +A + L +M
Sbjct: 507 AYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Query: 184 LKSS--------YLPKTS-TWH 196
+ YL + + TWH
Sbjct: 567 IARGLPLNFYDLYLTRLAQTWH 588
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 144/345 (41%), Gaps = 11/345 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P FN ++ S + + L + + M+ + + + +ILI CQ G A
Sbjct: 82 TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 141
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
+F ++ K G P ++ + + LC G+ ++A +++ G D +SY
Sbjct: 142 VFAKIL-------KMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYG 194
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ G +LL + P+V +Y+ +ID + A + +M+
Sbjct: 195 TLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSK 254
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T+ ++++ G ++ + M+ NI+ ++ + G +
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 247 FEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+ +++ K+G V ++ C ++ +A+ + + N DI + +I G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+I + EA L E+ K + ++ + L+ L G++ A
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 117/273 (42%), Gaps = 64/273 (23%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ T+NT+I+S+C GN+++AL + MK++ + ++ +Y+ILI LC+ GD KA
Sbjct: 659 GLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKA 718
Query: 66 EKLFDELFEKEIV----------------------------LCKFGSQPLAASYKPIFQY 97
+ +E+ +V L G + Y +
Sbjct: 719 ADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITV 778
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENG--------------- 141
LC G TRKA+ VL +++KRG + D ++Y +I G+C E
Sbjct: 779 LCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPN 838
Query: 142 ---YELLIW-----------------MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
Y L+W M R F+P+ YD L+ G+ + + +
Sbjct: 839 ITTYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKEESTKFYR 898
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
+ML ++P T T++ ++ + G H++ +
Sbjct: 899 EMLTKGFVPTTGTYNVLINCFAKAGRMHKAGEL 931
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 169/447 (37%), Gaps = 104/447 (23%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
DGG + D NTLI +C G + +A+ + E V D +Y+ L++ C+ GD
Sbjct: 219 DGGVTKDVIGLNTLIDGYCECGLMSQAMDLMEKRWRGDVEIDVVTYNTLLKAFCKMGDLK 278
Query: 64 KAEKLFDELF----------------EKEI---------------VLCKF---------- 82
+AE LF+E+F + EI CKF
Sbjct: 279 RAESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEESLSLS 338
Query: 83 ------GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCR 134
G + I LC HGK +A +++ + G DP +SY T+I +
Sbjct: 339 EQMIMNGIMSDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGL-DPNHVSYATIINSLFK 397
Query: 135 EGAYENGYELLIWMLRR-----------------------------------DFLPDVEI 159
G + L M+ R + P+
Sbjct: 398 SGRVMEAFNLQSQMVVRGVSFDIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNCVT 457
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
Y L+DG+ + + LA L+KM K P T+ SI+ +KG ++ V M+
Sbjct: 458 YSALLDGYCKLGEMELAELVLQKMQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 517
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE-------VVQFLCKR 272
RNI N + I+ F G +D A YK+ ++EE ++ L +
Sbjct: 518 QRNIMPNTFVYAILIDAFFRAGKQDVA----NGYYKEIKVHRLEESNVIFDILLNNLKRV 573
Query: 273 GKLPEARKLLLFSLKNHHN--VDIDLCN--AVILGLCEINRVLEAFGLCYELVEKGLHQE 328
G++ AR L +K+ H+ +D D+ N ++I G + A + E+ EK +
Sbjct: 574 GRMDAARPL----VKDMHSKGIDPDIVNYTSLIDGYFKEGNESAALSIVQEMTEKNTRFD 629
Query: 329 LTCLNDLVTALEARGKVEEAAFISKRI 355
+ N L+ L GK + S+ I
Sbjct: 630 VVACNTLIKGLLRLGKYDPQNVCSRMI 656
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 161/388 (41%), Gaps = 35/388 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD + N L+HS C G+LD AL N D+ +Y+ +I CQ+G D+
Sbjct: 120 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRNND----VIDNVTYNTVIWGFCQKGLVDQG 175
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L E+ ++ + + L Y C G R AE V+ ++ G T+D +
Sbjct: 176 FGLLSEMVKRGLCVDSITCNILVKGY-------CRIGFVRYAEWVMYNLVDGGVTKDVIG 228
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF----------------- 167
T+I G+C G +L+ R D DV Y+ L+ F
Sbjct: 229 LNTLIDGYCECGLMSQAMDLMEKRWRGDVEIDVVTYNTLLKAFCKMGDLKRAESLFNEIF 288
Query: 168 -LQKDKPLLAMETLEKMLKSSYL-PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQ 225
QKD+ L + + L P T+ ++++ + ES ++ M+ I
Sbjct: 289 AFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEESLSLSEQMIMNGIMS 348
Query: 226 NINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL 282
++ + + L HG +A + +Y+ G V ++ L K G++ EA L
Sbjct: 349 DVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 408
Query: 283 LFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEAR 342
+ + DI C ++ GL ++ + EA + +++ L + L+
Sbjct: 409 SQMVVRGVSFDIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKL 468
Query: 343 GKVEEAAFISKRIPGLENLDRSVLSYSS 370
G++E A + +++ E++ +V+++SS
Sbjct: 469 GEMELAELVLQKMQK-EHVPPNVITFSS 495
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 8/199 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G +NTLI C G +A V + M ++AD +Y+ LIR C +
Sbjct: 762 DMGLKLTLTVYNTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVE 821
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
KA K + ++F G P +Y + L G + ++++R + +RG +
Sbjct: 822 KAFKTYLQMFVD-------GISPNITTYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNA 874
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y ++ G+ R G E + ML + F+P Y+ LI+ F + + A E +
Sbjct: 875 ATYDILVSGYGRVGNKEESTKFYREMLTKGFVPTTGTYNVLINCFAKAGRMHKAGELFNE 934
Query: 183 MLKSSYLPKTSTWHSILAR 201
M +P +ST+ + AR
Sbjct: 935 MRTKGRIPNSSTYDILKAR 953
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 150/397 (37%), Gaps = 51/397 (12%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE--- 66
D T+NT+I C G +D+ + M + DS + +IL++ C+ G AE
Sbjct: 155 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSITCNILVKGYCRIGFVRYAEWVM 214
Query: 67 -KLFDELFEKEIVL----------CKFGSQPL--------------AASYKPIFQYLCEH 101
L D K+++ C SQ + +Y + + C+
Sbjct: 215 YNLVDGGVTKDVIGLNTLIDGYCECGLMSQAMDLMEKRWRGDVEIDVVTYNTLLKAFCKM 274
Query: 102 GKTRKAERVLRQIMK-------------------RGTQDPL-SYMTVIMGHCREGAYENG 141
G ++AE + +I R Q L +Y T+I +C+ E
Sbjct: 275 GDLKRAESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEES 334
Query: 142 YELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILAR 201
L M+ + DV ++ + K A ++M + P ++ +I+
Sbjct: 335 LSLSEQMIMNGIMSDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYATIINS 394
Query: 202 LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF--- 258
L + G E+ + M+ R + +I T ++ LF +A E+ E + K
Sbjct: 395 LFKSGRVMEAFNLQSQMVVRGVSFDIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPN 454
Query: 259 CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCY 318
CV ++ CK G++ A +L K H ++ +++I G + + +A +
Sbjct: 455 CVTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 514
Query: 319 ELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
E+V++ + L+ A GK + A K I
Sbjct: 515 EMVQRNIMPNTFVYAILIDAFFRAGKQDVANGYYKEI 551
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 99/258 (38%), Gaps = 9/258 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD + +LI + GN AL + + M D + + LI+ L + G YD
Sbjct: 590 GIDPDIVNYTSLIDGYFKEGNESAALSIVQEMTEKNTRFDVVACNTLIKGLLRLGKYD-P 648
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ + + E G P +Y I C G A +L ++ G + ++
Sbjct: 649 QNVCSRMIE-------LGLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVT 701
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G + ++L ML +P + L+ + + K ++ K++
Sbjct: 702 YNILIGGLCKTGDVQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLI 761
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ +++++ L G ++ V M+ R I + I H +
Sbjct: 762 DMGLKLTLTVYNTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVE 821
Query: 245 KAFEIVELLYKKGFCVKI 262
KAF+ ++ G I
Sbjct: 822 KAFKTYLQMFVDGISPNI 839
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 157/353 (44%), Gaps = 20/353 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+GG PD F+ LI+ G++++A +++ MK + + + L+ ++ +
Sbjct: 353 EGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLE 412
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A LFDE E I +Y + ++L E GK +A + +++ +G T
Sbjct: 413 HAYGLFDEAVEHGITN--------VVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSL 464
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY +I+GHC++G + Y +L +L R P+ Y LIDGF +K A E+
Sbjct: 465 VSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQ 524
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS----IELLF 238
M+ ++ P T+++++ L + G E+ L+ I+Q ++ + I+ F
Sbjct: 525 MMAANIAPTDHTFNTVINGLGKTGRVSETQD----KLNNFIKQGFVSTSITYNSIIDGFF 580
Query: 239 GHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
G D A + + G + ++ LCK K+ A ++ +D+
Sbjct: 581 KEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVV 640
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+A+I G C+++ + A EL++ GL N +++ +E A
Sbjct: 641 AYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAA 693
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G SPD T+ +LI C + + AL++ +MK + D +YS LI C+ D +
Sbjct: 597 ESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDME 656
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A K F EL + G P Y + A + ++++K D
Sbjct: 657 SASKFFTELLD-------IGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDL 709
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y ++I G +EG +L ML +D +PD+ +Y LI+G + A + L++
Sbjct: 710 QVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKE 769
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
M ++ P ++ ++A +G E+ R+ MLD+ +
Sbjct: 770 MDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGL 810
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 150/372 (40%), Gaps = 46/372 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P ++N LI HC G +D+A + +++ + ++ +Y++LI ++GD ++A
Sbjct: 459 GITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERA 518
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+F+++ I P ++ + L + G+ + + L +K+G ++
Sbjct: 519 FVVFEQMMAANIA-------PTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSIT 571
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET----- 179
Y ++I G +EGA ++ M PDV Y LIDG + +K LA+E
Sbjct: 572 YNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMK 631
Query: 180 ------------------------------LEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
++L P T ++S+++ +
Sbjct: 632 YKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNME 691
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVV 266
+ + M+ + ++ + T I L G A ++ + K V ++
Sbjct: 692 AALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLI 751
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
L G+L A K+L N+ + + N +I G + EAF L E+++KGL
Sbjct: 752 NGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLV 811
Query: 327 QELTCLNDLVTA 338
+ T + LV
Sbjct: 812 PDDTTYDILVNG 823
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G +P+T +N++I N++ AL + + M +V D Y+ +I L + G
Sbjct: 667 DIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLS 726
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A L+ E+ K+IV P Y + L +G+ A ++L+++ T
Sbjct: 727 LALDLYSEMLSKDIV-------PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSV 779
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ 169
L Y +I G+ REG + + L ML + +PD YD L++G L+
Sbjct: 780 LVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLK 826
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 162/409 (39%), Gaps = 58/409 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T + ++ + G +E K F+ K + D+A+YSIL++ +C+R D + A
Sbjct: 215 GIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLA 274
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAER---------------V 110
+L E+ E FG P +Y + + G +A R V
Sbjct: 275 CELLKEMRE-------FGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIV 327
Query: 111 LRQIMK---------------------RGTQDPLSYMTVIMGHCREGAYENGYELLIWML 149
R +MK D + + +I G + G E YEL M
Sbjct: 328 TRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMK 387
Query: 150 RRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
P+V I + L++GF +++ A ++ ++ + T++ +L L E G +
Sbjct: 388 LMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKWLGELGKVN 446
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGH---GHRDKAFEIVELLYKKGF---CVKIE 263
E+ + M+ + I ++ L+ GH G DKA+ +++ + ++G V
Sbjct: 447 EACNLWEKMVSKGITPSL---VSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYT 503
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNVDID--LCNAVILGLCEINRVLEAFGLCYELV 321
++ K+G R ++F N+ N VI GL + RV E +
Sbjct: 504 LLIDGFFKKGD--SERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFI 561
Query: 322 EKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
++G N ++ G V ++A ++ R + V++Y+S
Sbjct: 562 KQGFVSTSITYNSIIDGFFKEGAV-DSALLAYREMCESGISPDVITYTS 609
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 158/382 (41%), Gaps = 59/382 (15%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G GF D+ FN L+ S + +A++ F M + + L+ + +R
Sbjct: 142 GRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMV 201
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
A +L+DE+ E+ I +G + + + + GK + E+ ++ RG + D
Sbjct: 202 CDARQLYDEMVERGI----YGD---CYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVD 254
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y ++ CR R D LA E L+
Sbjct: 255 AAAYSILVQAVCR---------------RLDL--------------------NLACELLK 279
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH- 240
+M + ++P T+ +++ +++G E+ R+ M+ + N+ + T+S L+ G+
Sbjct: 280 EMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNV-IVTRS--LMKGYC 336
Query: 241 --GHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
G + A ++ + + + G V ++ K G + +A +L ++
Sbjct: 337 VLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVF 396
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA-----F 350
+ N+++ G E N + A+GL E VE G+ +T N L+ L GKV EA
Sbjct: 397 IVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVT-YNILLKWLGELGKVNEACNLWEKM 455
Query: 351 ISKRI-PGLENLDRSVLSYSSK 371
+SK I P L + + +L + K
Sbjct: 456 VSKGITPSLVSYNNLILGHCKK 477
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 164/369 (44%), Gaps = 14/369 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T LI+S C L+ A + + ++ + + LI LC G+ KA
Sbjct: 92 GIQPNIVTLTILINSFCHLNQLNFAFSILGKILKLGYEPNTVTLTTLINGLCLNGEVKKA 151
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+D++ KE L +F SY + LC+ G+T+ A +LR I + D +
Sbjct: 152 FHFYDDVIAKEFQLNQF-------SYGILINGLCKSGETKAALSLLRMIEGLSVKPDVVM 204
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C++ + YEL M+ + P+V Y LI GF + A+ +M+
Sbjct: 205 YTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMM 264
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ ++ L + G ++ + +M+ ++ N+ + ++ F +
Sbjct: 265 LKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMDGYFQVNEVN 324
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL-LFSLKNHHNVDIDLCNAV 300
KA ++ E++ + G I ++ LC + EA L L+N + N++
Sbjct: 325 KAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTVTY-NSL 383
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
I GLC+ R+ L E+ ++G + L+ AL +++A + ++ L
Sbjct: 384 IYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKNHNLDKAIALFTKMKDL-G 442
Query: 361 LDRSVLSYS 369
++ +V +Y+
Sbjct: 443 VEPNVYTYN 451
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 32/372 (8%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T++TLI+ C G L +A+++F M + D +++ILI LC+ G+ KA L
Sbjct: 235 PNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNL 294
Query: 69 FDELFEKEI----------------------------VLCKFGSQPLAASYKPIFQYLCE 100
+ + + ++ ++G P SY + LC
Sbjct: 295 LGLMIKSGVKLNVVTYSSLMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCN 354
Query: 101 HGKTRKAERVLRQI-MKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
+A + +++ ++ + ++Y ++I G C+ G +L+ M R +V
Sbjct: 355 SKMVDEAVNLFKKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVIT 414
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
Y L+D + A+ KM P T++ ++ RL + G ++ + M
Sbjct: 415 YTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMH 474
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLP 276
DR N+ T I+ L + + DKA E + G + ++ LCK G+L
Sbjct: 475 DRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLK 534
Query: 277 EARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
A ++ L +++D+ +I GLC+ E L ++ E G + ++
Sbjct: 535 NALEVFRILLIKGYHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEENGCAPDAITYEIII 594
Query: 337 TALEARGKVEEA 348
AL +GK++ A
Sbjct: 595 CALFGKGKIDMA 606
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G + + T+ +L+ + C NLD+A+ +F MK+ V + +Y+ILI LC+ G
Sbjct: 405 DRGQAANVITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIA 464
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A L DE+ ++ G +Y + LC++ KA +I G Q D
Sbjct: 465 DAWYLIDEMHDR-------GQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADV 517
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I G C+ G +N E+ +L + + DV Y +I G ++ + L K
Sbjct: 518 HTYTVLIDGLCKGGRLKNALEVFRILLIKGYHLDVLTYTVMISGLCKEGLFDEVLTLLSK 577
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
M ++ P T+ I+ L KG + ++ M+ R +
Sbjct: 578 MEENGCAPDAITYEIIICALFGKGKIDMAEKLLCEMIARGL 618
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 8/187 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N LI C +G + +A + + M + A+ +Y+ LI LC+ + D
Sbjct: 440 DLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLD 499
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
KA + F ++ + +G Q +Y + LC+ G+ + A V R ++ +G D
Sbjct: 500 KAIEFFTKIND-------WGIQADVHTYTVLIDGLCKGGRLKNALEVFRILLIKGYHLDV 552
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
L+Y +I G C+EG ++ LL M PD Y+ +I K K +A + L +
Sbjct: 553 LTYTVMISGLCKEGLFDEVLTLLSKMEENGCAPDAITYEIIICALFGKGKIDMAEKLLCE 612
Query: 183 MLKSSYL 189
M+ L
Sbjct: 613 MIARGLL 619
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 149/365 (40%), Gaps = 27/365 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+N L+ + C G +D A K+ M N D SY+ +I ++C+ GD DKA
Sbjct: 174 GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA 233
Query: 66 EKL-----------------------FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHG 102
+L F E F+ + G P SY + L + G
Sbjct: 234 RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMG 293
Query: 103 KTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYD 161
+ V ++ RG + + ++ ++I G G + L M+R P+V Y+
Sbjct: 294 NVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYN 353
Query: 162 CLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDR 221
LI G A+ +M K S P +T+ +I+ + G + M++
Sbjct: 354 TLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINC 413
Query: 222 NIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG---FCVKIEEVVQFLCKRGKLPEA 278
R N+ + T +++L D+AF++++ + G + ++ LC+ G++ A
Sbjct: 414 GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWA 473
Query: 279 RKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
+L K +I N ++ GL N EA GL EL E+ + + N ++
Sbjct: 474 MNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYG 533
Query: 339 LEARG 343
G
Sbjct: 534 FSFNG 538
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 140/348 (40%), Gaps = 18/348 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P +N ++ + S ++ NMK+ + + +Y++L++ LCQ G D A
Sbjct: 139 GCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGA 198
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
KL E+ K G P SY + +C+ G KA + MK P+ Y
Sbjct: 199 CKLLVEMSNK-------GCDPDDVSYTTVISSMCKLGDVDKAREL---AMKFEPVVPV-Y 247
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+E ++ ++L+ M+ R P+V Y +I L++ +M
Sbjct: 248 NALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFV 307
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ S++ +G ++ + +M+ + N+ I L G+ D+
Sbjct: 308 RGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDE 367
Query: 246 AFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL--LFSLKNHHNVDIDLCNAV 300
A + + K ++ K G L A + + + NV + C
Sbjct: 368 AISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVD 427
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ LC+++ +AF L ++ G + N+ + L G+VE A
Sbjct: 428 V--LCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWA 473
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P TFN I C AG ++ A+ V + M+ ++ + +Y+ L+ L + + +A
Sbjct: 449 GCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREA 508
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L EL E+++ +F +Y I +G ++ ++L +++ G + D ++
Sbjct: 509 CGLIRELEERKV---EFD----CVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTIT 561
Query: 125 YMTVIMGHCREGAYENGYELLIWM-LRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
T + +C+ G + ++L + ++F D+ + ++ G A+ L +M
Sbjct: 562 VNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEM 621
Query: 184 LKSSYLPKTSTWHSILARLLEK 205
LK P +TW+ ++ K
Sbjct: 622 LKRGIFPNIATWNVLVRGFFSK 643
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 166/368 (45%), Gaps = 12/368 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P TF LI+ C G++ A+++ ++++ +D +Y +LI LC+ G +A
Sbjct: 157 GLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEA 216
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
++ E+ P Y + LC+ G +A + ++ +G + L +
Sbjct: 217 VGWLRKMEERN-------WNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVT 269
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G ++ LL M++ +PD++ + L+D ++ K + A + M+
Sbjct: 270 YTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMI 329
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+P T++S++ R + E+ RV +M+ R +I T I + +
Sbjct: 330 LVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNIN 389
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA +++ + K GF V ++ C+ G+ A++L L K ++ C ++
Sbjct: 390 KAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIIL 449
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENL 361
GLC+ + EA L + + + L + + ++ + + GK+ A + +P + L
Sbjct: 450 DGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPA-KGL 508
Query: 362 DRSVLSYS 369
+V +Y+
Sbjct: 509 QINVYAYT 516
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 11/281 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+ LI C+ G EA + + M V D S +IL+ LC+ G +A
Sbjct: 262 GIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQA 321
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
+ + + G P +Y + C + +A RV ++ RG D ++
Sbjct: 322 KSVIG-------FMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVA 374
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C+ LL M++ F PDV + LI GF Q +PL A E M
Sbjct: 375 YTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMH 434
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K +P T IL L + E+ + M N+ NI + + ++ + G +
Sbjct: 435 KYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLN 494
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
A E+ L KG + + ++ K+G L +A LL
Sbjct: 495 TALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLL 535
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 141/330 (42%), Gaps = 19/330 (5%)
Query: 14 FNTLIHSHCSAGNL---DEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFD 70
F + + C +G L DEAL F M +++L+ + + Y A L
Sbjct: 56 FLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVK 115
Query: 71 ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM 130
E+ G +P + LC VL ++K G + + T+++
Sbjct: 116 EMHSS------LGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILI 169
Query: 131 -GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
G C +G EL+ + + + DV+ Y LI+G + K A+ L KM + ++
Sbjct: 170 NGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWN 229
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P + +++ L + G E+ + + M + I+ N+ T I+ L G +A +
Sbjct: 230 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 289
Query: 250 VELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
++ + K G ++ +V LCK GK+ +A+ ++ F + D+ N++I C
Sbjct: 290 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 349
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLV 336
N++ EA + +V +G CL D+V
Sbjct: 350 QNQMDEATRVFELMVSRG------CLPDIV 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 11/257 (4%)
Query: 101 HGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIW---MLRRDFLPDV 157
H K+ + +I + ++ + C+ G ++ E L + M + + LP V
Sbjct: 34 HSHCTKSTNINHEIQSHSNKT--QFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSV 91
Query: 158 EIYDCLIDGFLQKDKPLLAMETLEKMLKSS--YLPKTSTWHSILARLLEKGFPHESARVT 215
+ L+ GF+ K K +L K + SS P T + ++ L V
Sbjct: 92 IDFTLLL-GFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVL 150
Query: 216 VMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKR 272
ML + ++ T I L G +A E+V+ + K G+ ++ ++ LCK
Sbjct: 151 GTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKM 210
Query: 273 GKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCL 332
GK EA L + + N ++ + + V+ GLC+ V EA GLC E+ KG+ L
Sbjct: 211 GKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTY 270
Query: 333 NDLVTALEARGKVEEAA 349
L+ L G+ +EA
Sbjct: 271 TCLIQGLCNFGRWKEAG 287
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 139/312 (44%), Gaps = 11/312 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD +NT+I C ++++A ++ M + ++ D +Y+ LI C G A L
Sbjct: 40 PDVVMYNTIIDGMCKDKHVNDAFDLYSEMASKRIFPDVFTYNALISGFCIVGKLKDATDL 99
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+++ K I P ++ + C+ G ++A+ VL +MK+G + ++Y +
Sbjct: 100 FNKMTSKNI-------NPTVYTFNILVDAFCKEGNVKEAKNVLAMMMKQGINPNAVTYSS 152
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C N + M R +V Y+ +I+GF + AM E+M
Sbjct: 153 LMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRK 212
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+P T++S++ L + G + ++ M DR +I + ++ L + DKA
Sbjct: 213 LIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAI 272
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ L +G + ++ LCK G+L +A + L +N+ ++ +I G
Sbjct: 273 ALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGF 332
Query: 305 CEINRVLEAFGL 316
C EA L
Sbjct: 333 CNKGLFDEALAL 344
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 11/278 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+N LI C G L +A +F M + + +++IL+ C+ G+ +A+ +
Sbjct: 75 PDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKEGNVKEAKNV 134
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
++ K G P A +Y + C + A+ + + RG T + SY
Sbjct: 135 L-------AMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNI 187
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ + L M R +PDV Y+ LI+G + K A++ +++M
Sbjct: 188 MINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRG 247
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ S+L L + ++ + + D+ IR N+ T I+ L G + A
Sbjct: 248 QPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 307
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
I E L KG+ + + ++ C +G EA LL
Sbjct: 308 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 345
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 8/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ T+++L+ +C ++ A +F M VTA+ SY+I+I C+ D+A
Sbjct: 142 GINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEA 201
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF+E+ ++++ P +Y + LC+ GK A +++ ++ RG D ++
Sbjct: 202 MNLFEEMHCRKLI-------PDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIIT 254
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ C+ + LL + + P++ Y LIDG + + A E +L
Sbjct: 255 YSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 314
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y +T+ ++ KG E+ + M D + N I LF + D
Sbjct: 315 VKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDEND 374
Query: 245 KAFEIVELLYKKGF 258
KA ++ + +G
Sbjct: 375 KAENLLREMITRGL 388
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 10/267 (3%)
Query: 89 ASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIW 147
Y + LC+ G+T+ A +LR++ + Q D + Y T+I G C++ + ++L
Sbjct: 8 VGYGTLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M + PDV Y+ LI GF K A + KM + P T++ ++ ++G
Sbjct: 68 MASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKEGN 127
Query: 208 PHESARVTVMMLDRNIRQNINLSTKSIELLFGH---GHRDKAFEIVELLYKKGFCVKIEE 264
E+ V MM+ + I N + L+ G+ + A I + +G +
Sbjct: 128 VKEAKNVLAMMMKQGINPN---AVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWS 184
Query: 265 ---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELV 321
++ CK EA L D+ N++I GLC+ ++ A L E+
Sbjct: 185 YNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMH 244
Query: 322 EKGLHQELTCLNDLVTALEARGKVEEA 348
++G ++ + L+ AL +V++A
Sbjct: 245 DRGQPPDIITYSSLLDALCKNHQVDKA 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 28/143 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+++L+ + C +D+A+ + N+K+ + + +Y+ILI LC+ G +
Sbjct: 245 DRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLE 304
Query: 64 KAEKLFDELFEK---------EIVLCKFGSQ-------------------PLAASYKPIF 95
A +F++L K +++ F ++ P A +Y+ I
Sbjct: 305 DAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
+ L ++ + KAE +LR+++ RG
Sbjct: 365 RSLFDNDENDKAENLLREMITRG 387
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 163/382 (42%), Gaps = 46/382 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N LI+ G+ A +F N+ D +++ LI LC +G+ KA
Sbjct: 93 GIKPDLFTYNVLINCFSQLGHTHFAFSLFANILKRGYHPDIVTFNTLINGLCLKGEVHKA 152
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
F++L V+ KF Q SY+ + LC+ G+TR A R+L+++ ++ Q D +
Sbjct: 153 LNFFEKL-----VVLKF--QLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVM 205
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C++ ++ ++L M+ + PDV Y+ +I GF + A+ M
Sbjct: 206 YTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMK 265
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T++++++ ++G E V +M+ ++ +I ++ D
Sbjct: 266 LENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVD 325
Query: 245 KAFEIVELLYKK--------------GFC------------------------VKIEEVV 266
KA I + ++ GFC + ++
Sbjct: 326 KAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIAYSSLI 385
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
CK G++P+A +L+ +I N+++ LC+I+ V + L ++ KG+
Sbjct: 386 DGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQ 445
Query: 327 QELTCLNDLVTALEARGKVEEA 348
+ L L G++EEA
Sbjct: 446 PDAYTYTILTNGLFKDGRLEEA 467
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 159/348 (45%), Gaps = 16/348 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP TF ++ + C +D A + +M +S Y +LI L + ++A
Sbjct: 195 GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEA 254
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLS 124
KL +E+F G +P ++ + LC+ G+ +A ++ R +++ T D L
Sbjct: 255 MKLLEEMF-------LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK-M 183
++ G CR G + ML + P+ +Y+ LI+G++ + A + L K M
Sbjct: 308 QGYLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNM 363
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + + P T++ ++ L +KG+ + M+ + N+ T I+ GH
Sbjct: 364 VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++A ++V + KG V ++ LCK GK+ +A ++ DI N++
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I GLC+ +++ EA GL +++ +G+ N L+ A +++A
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 64/407 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN +IH C AG + EA K+ + M TAD+ L+ LC+ G D+A
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 66 EK-----------LFDELFEKEIVLCKF--------------GSQPLAASYKPIFQYLCE 100
L++ L +V +F G +P A ++ + LC+
Sbjct: 325 RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYEN------------------G 141
G A L +++K+G + + ++Y +I G C++G +E G
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 142 YELLIWMLRRD-----------------FLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y LI L +D PD+ ++ LI G + DK A+ ML
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T+++++ L ++ ++ M R + I+ L G +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
K ++E ++ + I ++ C+ GK+ +A + L ++ DI N++I
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
GLC++ R EA L L KG+H + N L++ G +A
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+NTLIH+ + +A K+ M+ D+ +Y+ LI+ LC+ G +K
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L +++F +EI P S + C GK A + LR +++RG T D ++
Sbjct: 567 LGLIEQMFGEEIF-------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C+ G ++ L + + PD Y+ LI + + A + L K +
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGV 679
Query: 185 KSSYLPKTSTWHSILARLLEK 205
+ ++P TW ++ ++K
Sbjct: 680 SNGFIPNEITWSILINYFVKK 700
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN+LI+ C ++EAL ++ +M V A++ +Y+ LI + +A
Sbjct: 472 GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Query: 66 EKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
+KL E+ +F PL +Y + + LC+ G T K ++ Q+ ++
Sbjct: 532 DKLVGEM--------RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+++ CR G + + L M++R PD+ Y+ LI+G + + A+ +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARV 214
P T++++++R +G +++ ++
Sbjct: 644 QAKGIHPDAVTYNTLISRYCYEGLFNDACQL 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 9/335 (2%)
Query: 17 LIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKE 76
LI + G K+ + MK+ + + +++R + G +A +L +++
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWG-- 157
Query: 77 IVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHCRE 135
V C +P SY + + L + A V ++ RG + V+M C
Sbjct: 158 -VYC---FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV 213
Query: 136 GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
++ LL M + +P+ IY LI + ++ AM+ LE+M P T+
Sbjct: 214 NEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273
Query: 196 HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK 255
+ ++ L + G HE+A++ ML R+ + + + L G D+A ++ +
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN 333
Query: 256 KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLK-NHHNVDIDLCNAVILGLCEINRVLEAF 314
V ++ G+ EA+ LL ++ D N +I GLC+ ++ A
Sbjct: 334 PN-TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
E+V+KG + L+ +G EEA+
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 169/394 (42%), Gaps = 39/394 (9%)
Query: 1 MKGDGGF-SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQR 59
M G+ G P+ TFN ++ C G ++EA + E MK SY+ + L +
Sbjct: 282 MDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRN 341
Query: 60 GDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT 119
G + + DE+ E G +P SY + LC + A R++ ++ G
Sbjct: 342 GKLLEGRSVLDEMVEN-------GIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGV 394
Query: 120 -QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
D ++Y T++ G+C +G +L M+R+ P+ + L++ ++ + A E
Sbjct: 395 YPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEE 454
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKG-FPHESARVTVMMLD----------------- 220
L+KM + SY T T + ++ L G S V+ M D
Sbjct: 455 MLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNS 514
Query: 221 -RNIRQNINLSTKSIELLFGHGHRDKAFE----IVELLYKKGF--CVKIEEVVQFLCKRG 273
N+ N+ L+ G K E +E++ K V + V CK+G
Sbjct: 515 IHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQG 574
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
K+ A ++L +N + + N++ILGL ++ E +GL E+ E+G+H ++ N
Sbjct: 575 KISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYN 634
Query: 334 DLVTALEARGKVEEAAFISKRIPGLENLDRSVLS 367
+++ L GK ++A + E LD+ V+S
Sbjct: 635 NMINCLCEGGKTKDATSLLH-----EMLDKGVVS 663
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 167/378 (44%), Gaps = 31/378 (8%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G G + + +NTL+ S C DEA K+ E M + D +++ I LC+ G
Sbjct: 211 GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKV 270
Query: 63 DKAEKLFDEL-FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD 121
+A ++F ++ + E+ L K P ++ + + C+ G +A ++ + K G
Sbjct: 271 FEASRIFRDMQMDGELGLPK----PNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFV 326
Query: 122 PL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
L SY T ++G R G G +L M+ P++ Y+ ++DG + L A +
Sbjct: 327 SLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLM 386
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+ M+ + P T T+ ++L KG E+ + M+ + N + L+
Sbjct: 387 DLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKE 446
Query: 241 GHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL--------------- 282
G + +A E+++ + +K + V VV LC+ G+L +A +++
Sbjct: 447 GRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKEN 506
Query: 283 -LFSLKNH-HNVDIDLCNAV-----ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDL 335
+ L N HNV ++ + + I GLC++ ++ EA E++ K LH + +
Sbjct: 507 PVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTF 566
Query: 336 VTALEARGKVEEAAFISK 353
V +GK+ A + K
Sbjct: 567 VLNFCKQGKISSALRVLK 584
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 163/365 (44%), Gaps = 25/365 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+T T NTL++S G EA ++ + M D+ + +I++ LC+ G+ +KA
Sbjct: 428 GCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKA 487
Query: 66 EKLFDELFE-------KEIVLCKFGSQ--------PLAASYKPIFQYLCEHGKTRKAERV 110
++ E++ KE + + P +Y + LC+ GK +A++
Sbjct: 488 SEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKK 547
Query: 111 LRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ 169
++M + D ++Y T ++ C++G + +L M R ++ Y+ LI G
Sbjct: 548 FIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGS 607
Query: 170 KDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINL 229
K + +++M + P T+++++ L E G ++ + MLD+ + ++
Sbjct: 608 KGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGV---VSP 664
Query: 230 STKSIELLFGHGHRDKAFEIVELLYKKGF--CVKIEEVVQF----LCKRGKLPEARKLLL 283
+ S ++L + F++ L+ C E + L GKL +A++L
Sbjct: 665 NVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFE 724
Query: 284 FSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARG 343
SL+ + +I LC+ R+ +A GL +L++KG + + ++ L RG
Sbjct: 725 ASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRG 784
Query: 344 KVEEA 348
++A
Sbjct: 785 NKQQA 789
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 142/325 (43%), Gaps = 19/325 (5%)
Query: 33 VFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYK 92
++ +M V ++ ++++LI++LC+ D A +LFD++ EK G QP +
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEK-------GCQPNKFTVG 190
Query: 93 PIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRD 152
+ + C G+T++A + M G + + Y T++ C++ + +L+ M +
Sbjct: 191 ILVRGFCRAGRTKQALEFVDGKMG-GNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKG 249
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL----PKTSTWHSILARLLEKGFP 208
LPDV ++ I + K A M L P T++ +L ++G
Sbjct: 250 LLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGM- 308
Query: 209 HESARVTVMMLDRNIRQNINLSTKSIEL--LFGHGHRDKAFEIVELLYKKGFCVKIEE-- 264
E AR V + + ++L + + L L +G + +++ + + G I
Sbjct: 309 MEEARSLVETMKKG-GNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYN 367
Query: 265 -VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEK 323
V+ LC+ + +AR+L+ + N D ++ G C +V EA + E++ K
Sbjct: 368 IVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRK 427
Query: 324 GLHQELTCLNDLVTALEARGKVEEA 348
G H N L+ +L G+ EA
Sbjct: 428 GCHPNTYTCNTLLNSLWKEGRKSEA 452
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 13/278 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+ TLI+ C G L+EA K F M + DS +Y + N C++G A ++
Sbjct: 523 PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRV 582
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++ G +Y + L G+ + ++ ++ +RG D +Y
Sbjct: 583 LKDMERN-------GCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNN 635
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFL-PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I C G ++ LL ML + + P+V + LI F + +A E + L S
Sbjct: 636 MINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVAL-S 694
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
K + + + LL G ++ + L+R++ + I+ L G D A
Sbjct: 695 VCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDA 754
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKL 281
+++ L KG+C V+ L KRG +A +L
Sbjct: 755 HGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 155/339 (45%), Gaps = 16/339 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP TF ++ + C +D A + +M +S Y +LI L + ++A
Sbjct: 195 GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEA 254
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLS 124
KL +E+F G +P ++ + LC+ G+ +A ++ R +++ T D L
Sbjct: 255 MKLLEEMF-------LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK-M 183
++ G CR G + ML + P+ +Y+ LI+G++ + A + L K M
Sbjct: 308 QGYLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNM 363
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + + P T++ ++ L +KG+ + M+ + N+ T I+ GH
Sbjct: 364 VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++A ++V + KG V ++ LCK GK+ +A ++ DI N++
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
I GLC+ +++ EA GL +++ +G+ N L+ A
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 64/407 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN +IH C AG + EA K+ + M TAD+ L+ LC+ G D+A
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 66 EK-----------LFDELFEKEIVLCKF--------------GSQPLAASYKPIFQYLCE 100
L++ L +V +F G +P A ++ + LC+
Sbjct: 325 RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYEN------------------G 141
G A L +++K+G + + ++Y +I G C++G +E G
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 142 YELLIWMLRRD-----------------FLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y LI L +D PD+ ++ LI G + DK A+ ML
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T+++++ L ++ ++ M R + I+ L G +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
K ++E ++ + I ++ C+ GK+ +A + L ++ DI N++I
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
GLC++ R EA L L KG+H + N L++ G +A
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+NTLIH+ + +A K+ M+ D+ +Y+ LI+ LC+ G +K
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L +++F +EI P S + C GK A + LR +++RG T D ++
Sbjct: 567 LGLIEQMFGEEIF-------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C+ G ++ L + + PD Y+ LI + + A + L K +
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGV 679
Query: 185 KSSYLPKTSTWHSILARLLEK 205
+ ++P TW ++ ++K
Sbjct: 680 SNGFIPNEITWSILINYFVKK 700
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN+LI+ C ++EAL ++ +M V A++ +Y+ LI + +A
Sbjct: 472 GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Query: 66 EKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
+KL E+ +F PL +Y + + LC+ G T K ++ Q+ ++
Sbjct: 532 DKLVGEM--------RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+++ CR G + + L M++R PD+ Y+ LI+G + + A+ +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARV 214
P T++++++R +G +++ ++
Sbjct: 644 QAKGIHPDAVTYNTLISRYCYEGLFNDACQL 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 9/335 (2%)
Query: 17 LIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKE 76
LI + G K+ + MK+ + + +++R + G +A +L +++
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWG-- 157
Query: 77 IVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHCRE 135
V C +P SY + + L + A V ++ RG + V+M C
Sbjct: 158 -VYC---FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV 213
Query: 136 GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
++ LL M + +P+ IY LI + ++ AM+ LE+M P T+
Sbjct: 214 NEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273
Query: 196 HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK 255
+ ++ L + G HE+A++ ML R+ + + + L G D+A ++ +
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN 333
Query: 256 KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLK-NHHNVDIDLCNAVILGLCEINRVLEAF 314
V ++ G+ EA+ LL ++ D N +I GLC+ ++ A
Sbjct: 334 PN-TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
E+V+KG + L+ +G EEA+
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 155/339 (45%), Gaps = 16/339 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP TF ++ + C +D A + +M +S Y +LI L + ++A
Sbjct: 195 GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEA 254
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLS 124
KL +E+F G +P ++ + LC+ G+ +A ++ R +++ T D L
Sbjct: 255 MKLLEEMF-------LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK-M 183
++ G CR G + ML + P+ +Y+ LI+G++ + A + L K M
Sbjct: 308 QGYLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNM 363
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + + P T++ ++ L +KG+ + M+ + N+ T I+ GH
Sbjct: 364 VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++A ++V + KG V ++ LCK GK+ +A ++ DI N++
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
I GLC+ +++ EA GL +++ +G+ N L+ A
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 64/407 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN +IH C AG + EA K+ + M TAD+ L+ LC+ G D+A
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 66 EK-----------LFDELFEKEIVLCKF--------------GSQPLAASYKPIFQYLCE 100
L++ L +V +F G +P A ++ + LC+
Sbjct: 325 RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYEN------------------G 141
G A L +++K+G + + ++Y +I G C++G +E G
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 142 YELLIWMLRRD-----------------FLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y LI L +D PD+ ++ LI G + DK A+ ML
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T+++++ L ++ ++ M R + I+ L G +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
K ++E ++ + I ++ C+ GK+ +A + L ++ DI N++I
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
GLC++ R EA L L KG+H + N L++ G +A
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+NTLIH+ + +A K+ M+ D+ +Y+ LI+ LC+ G +K
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L +++F +EI P S + C GK A + LR +++RG T D ++
Sbjct: 567 LGLIEQMFGEEIF-------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C+ G ++ L + + PD Y+ LI + + A + L K +
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGV 679
Query: 185 KSSYLPKTSTWHSILARLLEK 205
+ ++P TW ++ ++K
Sbjct: 680 SNGFIPNEITWSILINYFVKK 700
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN+LI+ C ++EAL ++ +M V A++ +Y+ LI + +A
Sbjct: 472 GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Query: 66 EKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
+KL E+ +F PL +Y + + LC+ G T K ++ Q+ ++
Sbjct: 532 DKLVGEM--------RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+++ CR G + + L M++R PD+ Y+ LI+G + + A+ +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARV 214
P T++++++R +G +++ ++
Sbjct: 644 QAKGIHPDAVTYNTLISRYCYEGLFNDACQL 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 9/335 (2%)
Query: 17 LIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKE 76
LI + G K+ + MK+ + + +++R + G +A +L +++
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWG-- 157
Query: 77 IVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHCRE 135
V C +P SY + + L + A V ++ RG + V+M C
Sbjct: 158 -VYC---FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV 213
Query: 136 GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
++ LL M + +P+ IY LI + ++ AM+ LE+M P T+
Sbjct: 214 NEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273
Query: 196 HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK 255
+ ++ L + G HE+A++ ML R+ + + + L G D+A ++ +
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN 333
Query: 256 KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLK-NHHNVDIDLCNAVILGLCEINRVLEAF 314
V ++ G+ EA+ LL ++ D N +I GLC+ ++ A
Sbjct: 334 PN-TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
E+V+KG + L+ +G EEA+
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 155/339 (45%), Gaps = 16/339 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP TF ++ + C +D A + +M +S Y +LI L + ++A
Sbjct: 195 GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEA 254
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLS 124
KL +E+F G +P ++ + LC+ G+ +A ++ R +++ T D L
Sbjct: 255 MKLLEEMF-------LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK-M 183
++ G CR G + ML + P+ +Y+ LI+G++ + A + L K M
Sbjct: 308 QGYLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNM 363
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + + P T++ ++ L +KG+ + M+ + N+ T I+ GH
Sbjct: 364 VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++A ++V + KG V ++ LCK GK+ +A ++ DI N++
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
I GLC+ +++ EA GL +++ +G+ N L+ A
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 64/407 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN +IH C AG + EA K+ + M TAD+ L+ LC+ G D+A
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 66 EK-----------LFDELFEKEIVLCKF--------------GSQPLAASYKPIFQYLCE 100
L++ L +V +F G +P A ++ + LC+
Sbjct: 325 RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYEN------------------G 141
G A L +++K+G + + ++Y +I G C++G +E G
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 142 YELLIWMLRRD-----------------FLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y LI L +D PD+ ++ LI G + DK A+ ML
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T+++++ L ++ ++ M R + I+ L G +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
K ++E ++ + I ++ C+ GK+ +A + L ++ DI N++I
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
GLC++ R EA L L KG+H + N L++ G +A
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+NTLIH+ + +A K+ M+ D+ +Y+ LI+ LC+ G +K
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L +++F +EI P S + C GK A + LR +++RG T D ++
Sbjct: 567 LGLIEQMFGEEIF-------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C+ G ++ L + + PD Y+ LI + + A + L K +
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGV 679
Query: 185 KSSYLPKTSTWHSILARLLEK 205
+ ++P TW ++ ++K
Sbjct: 680 SNGFIPNEITWSILINYFVKK 700
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN+LI+ C ++EAL ++ +M V A++ +Y+ LI + +A
Sbjct: 472 GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Query: 66 EKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
+KL E+ +F PL +Y + + LC+ G T K ++ Q+ ++
Sbjct: 532 DKLVGEM--------RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+++ CR G + + L M++R PD+ Y+ LI+G + + A+ +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARV 214
P T++++++R +G +++ ++
Sbjct: 644 QAKGIHPDAVTYNTLISRYCYEGLFNDACQL 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 9/335 (2%)
Query: 17 LIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKE 76
LI + G K+ + MK+ + + +++R + G +A +L +++
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWG-- 157
Query: 77 IVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHCRE 135
V C +P SY + + L + A V ++ RG + V+M C
Sbjct: 158 -VYC---FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV 213
Query: 136 GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
++ LL M + +P+ IY LI + ++ AM+ LE+M P T+
Sbjct: 214 NEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273
Query: 196 HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK 255
+ ++ L + G HE+A++ ML R+ + + + L G D+A ++ +
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN 333
Query: 256 KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLK-NHHNVDIDLCNAVILGLCEINRVLEAF 314
V ++ G+ EA+ LL ++ D N +I GLC+ ++ A
Sbjct: 334 PN-TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
E+V+KG + L+ +G EEA+
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 155/339 (45%), Gaps = 16/339 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP TF ++ + C +D A + +M +S Y +LI L + ++A
Sbjct: 195 GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEA 254
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLS 124
KL +E+F G +P ++ + LC+ G+ +A ++ R +++ T D L
Sbjct: 255 MKLLEEMF-------LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK-M 183
++ G CR G + ML + P+ +Y+ LI+G++ + A + L K M
Sbjct: 308 QGYLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNM 363
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + + P T++ ++ L +KG+ + M+ + N+ T I+ GH
Sbjct: 364 VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++A ++V + KG V ++ LCK GK+ +A ++ DI N++
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
I GLC+ +++ EA GL +++ +G+ N L+ A
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 64/407 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN +IH C AG + EA K+ + M TAD+ L+ LC+ G D+A
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 66 EK-----------LFDELFEKEIVLCKF--------------GSQPLAASYKPIFQYLCE 100
L++ L +V +F G +P A ++ + LC+
Sbjct: 325 RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYEN------------------G 141
G A L +++K+G + + ++Y +I G C++G +E G
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 142 YELLIWMLRRD-----------------FLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y LI L +D PD+ ++ LI G + DK A+ ML
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T+++++ L ++ ++ M R + I+ L G +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
K ++E ++ + I ++ C+ GK+ +A + L ++ DI N++I
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
GLC++ R EA L L KG+H + N L++ G +A
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+NTLIH+ + +A K+ M+ D+ +Y+ LI+ LC+ G +K
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L +++F +EI P S + C GK A + LR +++RG T D ++
Sbjct: 567 LGLIEQMFGEEIF-------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C+ G ++ L + + PD Y+ LI + + A + L K +
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGV 679
Query: 185 KSSYLPKTSTWHSILARLLEK 205
+ ++P TW ++ ++K
Sbjct: 680 SNGFIPNEITWSILINYFVKK 700
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN+LI+ C ++EAL ++ +M V A++ +Y+ LI + +A
Sbjct: 472 GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Query: 66 EKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
+KL E+ +F PL +Y + + LC+ G T K ++ Q+ ++
Sbjct: 532 DKLVGEM--------RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+++ CR G + + L M++R PD+ Y+ LI+G + + A+ +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARV 214
P T++++++R +G +++ ++
Sbjct: 644 QAKGIHPDAVTYNTLISRYCYEGLFNDACQL 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 9/335 (2%)
Query: 17 LIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKE 76
LI + G K+ + MK+ + + +++R + G +A +L +++
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWG-- 157
Query: 77 IVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHCRE 135
V C +P SY + + L + A V ++ RG + V+M C
Sbjct: 158 -VYC---FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV 213
Query: 136 GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
++ LL M + +P+ IY LI + ++ AM+ LE+M P T+
Sbjct: 214 NEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273
Query: 196 HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK 255
+ ++ L + G HE+A++ ML R+ + + + L G D+A ++ +
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN 333
Query: 256 KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLK-NHHNVDIDLCNAVILGLCEINRVLEAF 314
V ++ G+ EA+ LL ++ D N +I GLC+ ++ A
Sbjct: 334 PN-TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
E+V+KG + L+ +G EEA+
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 155/339 (45%), Gaps = 16/339 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP TF ++ + C +D A + +M +S Y +LI L + ++A
Sbjct: 195 GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEA 254
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLS 124
KL +E+F G +P ++ + LC+ G+ +A ++ R +++ T D L
Sbjct: 255 MKLLEEMF-------LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK-M 183
++ G CR G + ML + P+ +Y+ LI+G++ + A + L K M
Sbjct: 308 QGYLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNM 363
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ + + P T++ ++ L +KG+ + M+ + N+ T I+ GH
Sbjct: 364 VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++A ++V + KG V ++ LCK GK+ +A ++ DI N++
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
I GLC+ +++ EA GL +++ +G+ N L+ A
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 64/407 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN +IH C AG + EA K+ + M TAD+ L+ LC+ G D+A
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 66 EK-----------LFDELFEKEIVLCKF--------------GSQPLAASYKPIFQYLCE 100
L++ L +V +F G +P A ++ + LC+
Sbjct: 325 RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYEN------------------G 141
G A L +++K+G + + ++Y +I G C++G +E G
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 142 YELLIWMLRRD-----------------FLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y LI L +D PD+ ++ LI G + DK A+ ML
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ T T+++++ L ++ ++ M R + I+ L G +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
K ++E ++ + I ++ C+ GK+ +A + L ++ DI N++I
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
GLC++ R EA L L KG+H + N L++ G +A
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+NTLIH+ + +A K+ M+ D+ +Y+ LI+ LC+ G +K
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L +++F +EI P S + C GK A + LR +++RG T D ++
Sbjct: 567 LGLIEQMFGEEIF-------PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C+ G ++ L + + PD Y+ LI + + A + L K +
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGV 679
Query: 185 KSSYLPKTSTWHSILARLLEK 205
+ ++P TW ++ ++K
Sbjct: 680 SNGFIPNEITWSILINYFVKK 700
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFN+LI+ C ++EAL ++ +M V A++ +Y+ LI + +A
Sbjct: 472 GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Query: 66 EKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
+KL E+ +F PL +Y + + LC+ G T K ++ Q+ ++
Sbjct: 532 DKLVGEM--------RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+++ CR G + + L M++R PD+ Y+ LI+G + + A+ +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARV 214
P T++++++R +G +++ ++
Sbjct: 644 QAKGIHPDAVTYNTLISRYCYEGLFNDACQL 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 9/335 (2%)
Query: 17 LIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKE 76
LI + G K+ + MK+ + + +++R + G +A +L +++
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWG-- 157
Query: 77 IVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM-GHCRE 135
V C +P SY + + L + A V ++ RG + V+M C
Sbjct: 158 -VYC---FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV 213
Query: 136 GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
++ LL M + +P+ IY LI + ++ AM+ LE+M P T+
Sbjct: 214 NEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273
Query: 196 HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK 255
+ ++ L + G HE+A++ ML R+ + + + L G D+A ++ +
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN 333
Query: 256 KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLK-NHHNVDIDLCNAVILGLCEINRVLEAF 314
V ++ G+ EA+ LL ++ D N +I GLC+ ++ A
Sbjct: 334 PN-TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
E+V+KG + L+ +G EEA+
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 13/284 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G + T++TLI C G L EA+ +F M +V + +++IL+ C+ DK
Sbjct: 307 AGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDK 366
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
A + + + EK++ P +Y + C + +A+R+ + + +RG T D L
Sbjct: 367 ANYVLNVMMEKDVT-------PNVITYSCLLYGYCLVNEVNEAKRIFKSMTQRGVTFDVL 419
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY +I C+ + +L M + PDV Y L+DG + ++ A++ +++M
Sbjct: 420 SYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNALKLVDEM 479
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
P T+ SIL LL+K E+ + D+ I+ N+ T I+ L +G
Sbjct: 480 HDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFIDGLCKNGRL 539
Query: 244 DKAFEIVELLYKKGFC-----VKIEEVVQFLCKRGKLPEARKLL 282
+ A+E+ E L + ++ C++G EA LL
Sbjct: 540 EDAWEVFEDLLVNSYNHNRNKYTWTVMIHGFCRKGLFDEALTLL 583
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 162/383 (42%), Gaps = 48/383 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PD TFNTLI+ +C G DE L+ ++ + + SY LI LC+ G+ +A
Sbjct: 133 GYHPDVVTFNTLINGYCLKGENDELLRFYDKVVGLGFQLNQISYGTLINKLCKGGETREA 192
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLS 124
+L ++ K + QP Y + +C+ A + +++ KR + + ++
Sbjct: 193 LQLLRQVDGKLV-------QPHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVIT 245
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G C G ++ L M+ + P V ++ L+DGF ++ K A L M+
Sbjct: 246 YNTLLHGLCIVGQLKDAISLFKIMVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMM 305
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K+ T+ +++ G E+ + M+ + N+ T ++ D
Sbjct: 306 KAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKID 365
Query: 245 KAFEIVELLYKK--------------GFCVKIEEV--------------VQF-------- 268
KA ++ ++ +K G+C+ + EV V F
Sbjct: 366 KANYVLNVMMEKDVTPNVITYSCLLYGYCL-VNEVNEAKRIFKSMTQRGVTFDVLSYTIM 424
Query: 269 ---LCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
CK + EARKL D+ ++++ GLC+ R+ A L E+ ++G
Sbjct: 425 ISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQ 484
Query: 326 HQELTCLNDLVTALEARGKVEEA 348
+ + ++ AL + +VEEA
Sbjct: 485 PPNIFTYSSILDALLKKHQVEEA 507
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 47/293 (16%)
Query: 5 GGFSPDTCTFNTLI-----------------------------------HSHCSAGNLDE 29
G +P+ TF L+ + +C ++E
Sbjct: 342 GKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLLYGYCLVNEVNE 401
Query: 30 ALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAA 89
A ++F++M VT D SY+I+I C+ D+A KLF+E+ K+I P
Sbjct: 402 AKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIF-------PDVV 454
Query: 90 SYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLIW 147
+Y + LC+ + A +++ ++ RG Q P +Y +++ ++ E EL
Sbjct: 455 TYSSLVDGLCKSERIPNALKLVDEMHDRG-QPPNIFTYSSILDALLKKHQVEEAIELFKE 513
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTS--TWHSILARLLEK 205
+ P+V Y IDG + + A E E +L +SY + TW ++ K
Sbjct: 514 FKDKGIQPNVYTYTIFIDGLCKNGRLEDAWEVFEDLLVNSYNHNRNKYTWTVMIHGFCRK 573
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF 258
G E+ + M D + + I L G +DKA ++ EL+ F
Sbjct: 574 GLFDEALTLLSNMKDNSCIPDTVTYKTIISSLLDKGEKDKARKLCELIASGNF 626
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 152/346 (43%), Gaps = 17/346 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PD T NT I C G + +AL + + D SY LI LC+ G+ A
Sbjct: 148 GYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAA 207
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLS 124
+L + K + L A Y + + + A + +++ KR + D ++
Sbjct: 208 LQLLRRVDGKLVQLN-------AVMYNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVVT 260
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G G ++ +L M+ + PDV ++ L+DGF ++ + A L+ M+
Sbjct: 261 YSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMM 320
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---G 241
P ST+++++ + E V MM+ + I+ N+ L+ G+
Sbjct: 321 IQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNV---VTYCSLMDGYCLVK 377
Query: 242 HRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+KA +I + ++G + ++ CK K+ +A KL + H D+ N
Sbjct: 378 QVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYN 437
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGK 344
++I GLC+ ++ AF L E+ ++G + N ++ AL + K
Sbjct: 438 SLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLK 483
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 152/347 (43%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ TFN LI+ C G + A V + D + + I+ C +G +A
Sbjct: 113 GINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQA 172
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D+L G SY + LC+ G+TR A ++LR++ + Q + +
Sbjct: 173 LNFHDKL-------VALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVM 225
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y TVI G ++ + ++L M+ + PDV Y LI GF K A++ KM+
Sbjct: 226 YNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI 285
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ ++ ++G ++ V MM+ ++I+ N++ ++
Sbjct: 286 LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMK 345
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+ + ++ K+G V ++ C ++ +A+K+ + ++ N +I
Sbjct: 346 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMI 405
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C+I +V +A L E+ K + ++ N L+ L GK+ A
Sbjct: 406 NGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYA 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 41/278 (14%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD T++ LI G L +A+ +F M + D +++IL+ C+ G KA+
Sbjct: 255 SPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKN 314
Query: 68 LFDELFEKEI----------------------------VLCKFGSQPLAASYKPIFQYLC 99
+ D + ++I ++ K G +P +Y + C
Sbjct: 315 VLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 374
Query: 100 EHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVE 158
+ KA+++ + +RG T + SY +I G C+ + +L I M + +PDV
Sbjct: 375 LVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVV 434
Query: 159 IYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
Y+ LIDG + K A + + +M P T++SIL LL K +
Sbjct: 435 TYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTK------------L 482
Query: 219 LDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKK 256
D+ I+ N++ T I+ L G + A ++ E L K
Sbjct: 483 KDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 520
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+ +L+ +C +++A K+F M VTA+ SY+I+I C+ DKA
Sbjct: 358 GIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKA 417
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
KLF E+ K I+ P +Y + LC+ GK A +++ ++ RG Q P +
Sbjct: 418 MKLFIEMHHKHII-------PDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRG-QPPNII 469
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +++ LL + + P++ LI G Q K A + E +
Sbjct: 470 TYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDL 517
Query: 184 L 184
L
Sbjct: 518 L 518
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 177/392 (45%), Gaps = 52/392 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D TFN LI + C A L A+ + E M N + D +++ L++ + GD + A
Sbjct: 162 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 221
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
K+ ++ +G S K + C+ G+ +A R + ++ + G + D ++
Sbjct: 222 LKMKKQML-------GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 274
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +++ G CR G + +++ +M+ + F PDV Y+ LI G + + A+E L++M+
Sbjct: 275 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 334
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T T++++++ L ++ + + +++ + + ++ I+ L ++D
Sbjct: 335 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 394
Query: 245 KAFEIVELLYKKG-----FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNH--------HN 291
A E+ E + KG F I ++ LC +L EA +LL +++ +N
Sbjct: 395 IAMEMFEEMKNKGCKPDEFTYSI--LIDSLCYERRLKEAL-MLLKEMESSGCARNAVVYN 451
Query: 292 VDID-LC---------------------------NAVILGLCEINRVLEAFGLCYELVEK 323
ID LC N +I GLC+ RV EA L +++ +
Sbjct: 452 TLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIME 511
Query: 324 GLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
GL + N L+T G +E+A I + +
Sbjct: 512 GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 543
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 151/347 (43%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GFSPD TFN+L++ C GN+++AL + + M D +Y+ LI +C+ G+++KA
Sbjct: 267 GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKA 326
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++ ++ +E P +Y + LC+ + A + R ++ +G D +
Sbjct: 327 IEILQQMILRE-------CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCT 379
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T+I G C + E+ M + PD Y LID + + A+ L++M
Sbjct: 380 FNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEME 439
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S +++++ L + ++ + M + ++ I+ L + +
Sbjct: 440 SSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVE 499
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A ++++ + +G ++ + C+ G + +A ++ N DI +I
Sbjct: 500 EASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLI 559
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
GLC RV A L + KG+ N ++ AL R + +E
Sbjct: 560 GGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEG 606
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 145/337 (43%), Gaps = 11/337 (3%)
Query: 17 LIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKE 76
L++ C G ++EAL+ + + D +++ L+ C+ G+ + A + D + EK
Sbjct: 243 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK- 301
Query: 77 IVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLSYMTVIMGHCRE 135
G P +Y + +C+ G+ KA +L+Q I++ + + ++Y T+I C+E
Sbjct: 302 ------GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKE 355
Query: 136 GAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
E +L ++ + LPDV ++ LI G +AME E+M P T+
Sbjct: 356 NEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTY 415
Query: 196 HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI---VEL 252
++ L + E+ + M +N + I+ L + A EI +EL
Sbjct: 416 SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMEL 475
Query: 253 LYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLE 312
L V ++ LCK ++ EA +L+ + D N+++ C + + +
Sbjct: 476 LGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEK 535
Query: 313 AFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
A + + G ++ L+ L G+V+ A+
Sbjct: 536 AGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVAS 572
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 159/370 (42%), Gaps = 14/370 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PDT +N +++ L + M N + D +++++LI+ LC+ A
Sbjct: 127 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 186
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ +E+ G +P ++ + Q E G A ++ +Q++ G +S
Sbjct: 187 ILMLEEM-------ANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVS 239
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ G C+EG E ++ + F PD ++ L++GF + A++ ++ M+
Sbjct: 240 VKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMI 299
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ + P T++S+++ + + G ++ + M+ R N I L +
Sbjct: 300 EKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIE 359
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A ++ +L KG + ++Q LC A ++ +KN + +++
Sbjct: 360 AATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFE-EMKNKGCKPDEFTYSIL 418
Query: 302 L-GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
+ LC R+ EA L E+ G + N L+ L ++E+A I ++ L
Sbjct: 419 IDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME-LLG 477
Query: 361 LDRSVLSYSS 370
+ RS ++Y++
Sbjct: 478 VSRSSVTYNT 487
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 29/246 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD CTFNTLI C + N D A+++FE MKN D +YSILI +LC +A
Sbjct: 372 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 431
Query: 66 EKLFDEL-----FEKEIV-------LCK----------------FGSQPLAASYKPIFQY 97
L E+ +V LCK G + +Y +
Sbjct: 432 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 491
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC++ + +A +++ Q++ G + D +Y +++ CR G E +++ M PD
Sbjct: 492 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 551
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y LI G + + +A + L + + ++ ++ L + E R+
Sbjct: 552 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFR 611
Query: 217 MMLDRN 222
M++++
Sbjct: 612 EMMEKS 617
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 155/347 (44%), Gaps = 8/347 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P T TF+TLI+ C G L EAL +++ D SY LI LC+ G+ A
Sbjct: 77 GYHPTTITFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSYGALISGLCKIGETRAA 136
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
K+ ++ K + Y I LC+ +A + Q I+K+ + + ++
Sbjct: 137 LKMLRQIEGKLV-------NTNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVT 189
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++I G C G + + L ML ++ P++ + LID ++ K A + M+
Sbjct: 190 LSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMM 249
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T+++++ +++ V ++ R + N++ T I L D
Sbjct: 250 KEGVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVD 309
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+A + ++ + V ++ LCK G++ A +LL +I N+++ L
Sbjct: 310 EALNFFKEMHCEPNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHAL 369
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
C+ ++V +A L ++ ++G+ + N L+ L G++E A I
Sbjct: 370 CKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVI 416
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 138/323 (42%), Gaps = 14/323 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SP+ T ++LI+ C G L EA +F M + + +++ILI LC+ G +A+
Sbjct: 183 ISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAK 242
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR-GTQDPLSY 125
+ V+ K G +P +Y + C + KA+ V I KR T + SY
Sbjct: 243 NVIA-------VMMKEGVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSY 295
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+ + E L + P+ Y LID + + A E L++M
Sbjct: 296 TIIINGLCKIKMVD---EALNFFKEMHCEPNTVTYSSLIDALCKSGRISHAWELLDQMHD 352
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
T++S+L L + ++ + + D+ I+ NIN I+ L G +
Sbjct: 353 RGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLEN 412
Query: 246 AFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A I + L KG+ VK+ ++ LC G EA LL N D+ +I
Sbjct: 413 AQVIFQDLLIKGYKVKVWTYNTMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIY 472
Query: 303 GLCEINRVLEAFGLCYELVEKGL 325
L + + +A L E++ +GL
Sbjct: 473 ALFKNDENDKAEKLLREMITRGL 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 144/336 (42%), Gaps = 14/336 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+ + +N +I S C + EA +++ M +++ + + S LI C G +A
Sbjct: 149 NTNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFG 208
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYM 126
LF E+ K I P ++ + LC+ GK ++A+ V+ +MK G + + +Y
Sbjct: 209 LFHEMLLKNI-------NPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYN 261
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T++ G+C + + + +R P+V Y +I+G K + E L +
Sbjct: 262 TLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLC---KIKMVDEALNFFKEM 318
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T T+ S++ L + G + + M DR NI + L + DKA
Sbjct: 319 HCEPNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKA 378
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+V+ + +G I ++ LCK G+L A+ + L + V + N +I G
Sbjct: 379 IALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVWTYNTMING 438
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
LC EA L ++ + G ++ ++ AL
Sbjct: 439 LCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIYAL 474
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 114/254 (44%), Gaps = 11/254 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T+NTL+ +C +++A VF + ++T + SY+I+I LC+ D+A
Sbjct: 252 GVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEA 311
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
F E+ +P +Y + LC+ G+ A +L Q+ RG + ++
Sbjct: 312 LNFFKEMH----------CEPNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIIT 361
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ C+ + L+ + + P++ Y+ LIDG ++ + A + +L
Sbjct: 362 YNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLL 421
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y K T+++++ L +G E+ + M D ++ I LF + D
Sbjct: 422 IKGYKVKVWTYNTMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIYALFKNDEND 481
Query: 245 KAFEIVELLYKKGF 258
KA +++ + +G
Sbjct: 482 KAEKLLREMITRGL 495
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+T T+++LI + C +G + A ++ + M + A+ +Y+ L+ LC+ DKA L
Sbjct: 322 PNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIAL 381
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
++ ++ G QP +Y + LC+ G+ A+ + + ++ +G + + +Y T
Sbjct: 382 VKKIKDQ-------GIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVWTYNT 434
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C EG ++ LL M PDV Y+ +I + D+ A + L +M+
Sbjct: 435 MINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIYALFKNDENDKAEKLLREMITRG 494
Query: 188 YL 189
L
Sbjct: 495 LL 496
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G + T+N+L+H+ C +D+A+ + + +K+ + + +Y+ILI LC+ G +
Sbjct: 352 DRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLE 411
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ +F +L K G + +Y + LC G +A +L ++ G T D
Sbjct: 412 NAQVIFQDLLIK-------GYKVKVWTYNTMINGLCLEGLFDEAMTLLEKMEDNGCTPDV 464
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I + + +LL M+ R L
Sbjct: 465 VTYETIIYALFKNDENDKAEKLLREMITRGLL 496
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 165/359 (45%), Gaps = 19/359 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKV-FENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+P+T +NTLI+ + ++G +EA + ++NM D+ ++I+I LC++G A
Sbjct: 274 NPNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSAL 333
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+ +E+ EK G +P +Y + C+ GK + A ++ ++ +G + D ++
Sbjct: 334 EFLNEMVEK-------GFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTF 386
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I G C+ E L M + + Y+ LI FL+ D A + + +ML
Sbjct: 387 NSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLF 446
Query: 186 SSYLPKTSTWHSILARLLEKGF-PHESARVTV-----MMLDRNIRQNINLSTKSIELLFG 239
+ T++ ++ L + G ++ T+ M L+ I I +T L G
Sbjct: 447 RGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFLEGVIANTITYNTLIHAFLRG 506
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
+ +A+++V + +GF + +++ LCK G + + L+ I+
Sbjct: 507 DSIQ-QAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINS 565
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
CN + C I +V +A +++ +GL ++ N L+ L G+++EA + R+
Sbjct: 566 CNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVTYNSLINGLCKNGRIQEALNLFNRL 624
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 142/344 (41%), Gaps = 16/344 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GF PD FN +I C G L AL+ M + +Y+ILI C+ G
Sbjct: 307 AGFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQD 366
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPL 123
A +++ E+ K G +P ++ + LC++ K +A + + G + +
Sbjct: 367 AFQMYGEMSSK-------GCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTI 419
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI-----DGFLQKDKPLLAME 178
+Y T+I R + + Y+L+ ML R F D Y+ LI G + DK +
Sbjct: 420 TYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLG 479
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
M + T T+++++ L ++ ++ ML R + I+ L
Sbjct: 480 LYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALC 539
Query: 239 GHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
G +K ++E ++ KG I + C GK+ +A + L + DI
Sbjct: 540 KTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIV 599
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
N++I GLC+ R+ EA L L +G+ N L+++
Sbjct: 600 TYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSF 643
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T T+NTLIH+ ++ +A K+ M D+ +Y+ LI+ LC+ G +K
Sbjct: 488 GVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKG 547
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L +E+F K I P S + C GK A R LR ++ RG T D ++
Sbjct: 548 LGLIEEMFGKGIF-------PSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVT 600
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G C+ G + L + P+ Y+ LI F +D A L K +
Sbjct: 601 YNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSFCYEDLFNDACLLLFKGV 660
Query: 185 KSSYLPKTSTWHSILARLLEK 205
+ ++P TW ++ ++K
Sbjct: 661 SNGFIPNEITWSILINCFVKK 681
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 137/333 (41%), Gaps = 26/333 (7%)
Query: 32 KVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASY 91
K+ + MK+ + + +++R + G +A +L +++ V C +P SY
Sbjct: 115 KLLKQMKDEGCVFKESLFILILRYYGKAGLPGQATRLLLDMWG---VYC---FEPTFKSY 168
Query: 92 KPIFQYLCEHGKTRKAERVLRQIMKRGTQDP------------LSYMTVIMGHCREGAYE 139
+ + L + A V ++ RG +++ VI G C+ G
Sbjct: 169 NVVLEILVSGNCPKVAPNVFYDMLSRGISPTVHTFGIVMKAFCMTFNDVIHGLCKAGRIH 228
Query: 140 NGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL 199
+LL ML F D IY CL+ G + + A L K+ P T +++++
Sbjct: 229 EAAKLLDRMLLHGFTTDALIYGCLMPGLCRMGQVDEARVLLSKIPN----PNTVLYNTLI 284
Query: 200 ARLLEKGFPHESARVTVM-MLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF 258
+ G E+ + M+ + + I+ L G+ A E + + +KGF
Sbjct: 285 NGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGF 344
Query: 259 ---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFG 315
+ ++ CK GK+ +A ++ DI N++I GLC+ +++ EA G
Sbjct: 345 EPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALG 404
Query: 316 LCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
L +++ +G+ N L+ A +++A
Sbjct: 405 LYHDMFLEGVIANTITYNTLIHAFLRGDSIQQA 437
>Medtr3g023180.1 | PPR containing plant-like protein | HC |
chr3:7000866-7006661 | 20130731
Length = 723
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 176/376 (46%), Gaps = 20/376 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ G P +N ++ + G+LD AL V+ + + + +S ++ ILI+ LC+ G
Sbjct: 215 MRNKFGVKPRVFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTFMILIKGLCKGG 274
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+ ++ + EK LCK P +Y + + + + G RV ++ MKR
Sbjct: 275 KIDEMLEVLGRMREK---LCK----PDVFAYTALVRIMVKEGNLDGCLRVWKE-MKRDRV 326
Query: 121 DP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
DP ++Y T+I G + G GYEL M + L D IY L++ F+ +K LA +
Sbjct: 327 DPDVMAYGTIIGGLAKGGRVSEGYELFKEMKSKGHLIDRAIYGSLVESFVAGNKVGLAFD 386
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
L+ ++ S Y +++++ L ++ ++ + + + + LS K + L +
Sbjct: 387 LLKDLVSSGYRADLGMYNNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDF-LSVKPLLLAY 445
Query: 239 GHGHR-DKAFEIVELLYKKGFCVKIEEVVQFLC----KRGKLPEARKLLLFSLKNHHNVD 293
R ++ F ++E + K GF V I+++ +F K+G PE + LK V
Sbjct: 446 AEAKRMEEFFMLLEKMKKLGFPV-IDDLSKFFSHLVEKKG--PEMALEIFTHLKEKSYVS 502
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
+++ N + L +V +A L E+ L + + N + L G+++EA
Sbjct: 503 VEIYNIFMESLHLSGKVEKALSLFDEIKGSDLEPDSSTYNIAILCLVDHGQIKEACECHN 562
Query: 354 RIPGLENLDRSVLSYS 369
+I + ++ SV +Y+
Sbjct: 563 KIIEMSSIP-SVAAYN 577
>Medtr3g023180.2 | PPR containing plant-like protein | HC |
chr3:7000585-7006661 | 20130731
Length = 723
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 176/376 (46%), Gaps = 20/376 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ G P +N ++ + G+LD AL V+ + + + +S ++ ILI+ LC+ G
Sbjct: 215 MRNKFGVKPRVFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTFMILIKGLCKGG 274
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+ ++ + EK LCK P +Y + + + + G RV ++ MKR
Sbjct: 275 KIDEMLEVLGRMREK---LCK----PDVFAYTALVRIMVKEGNLDGCLRVWKE-MKRDRV 326
Query: 121 DP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
DP ++Y T+I G + G GYEL M + L D IY L++ F+ +K LA +
Sbjct: 327 DPDVMAYGTIIGGLAKGGRVSEGYELFKEMKSKGHLIDRAIYGSLVESFVAGNKVGLAFD 386
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
L+ ++ S Y +++++ L ++ ++ + + + + LS K + L +
Sbjct: 387 LLKDLVSSGYRADLGMYNNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDF-LSVKPLLLAY 445
Query: 239 GHGHR-DKAFEIVELLYKKGFCVKIEEVVQFLC----KRGKLPEARKLLLFSLKNHHNVD 293
R ++ F ++E + K GF V I+++ +F K+G PE + LK V
Sbjct: 446 AEAKRMEEFFMLLEKMKKLGFPV-IDDLSKFFSHLVEKKG--PEMALEIFTHLKEKSYVS 502
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
+++ N + L +V +A L E+ L + + N + L G+++EA
Sbjct: 503 VEIYNIFMESLHLSGKVEKALSLFDEIKGSDLEPDSSTYNIAILCLVDHGQIKEACECHN 562
Query: 354 RIPGLENLDRSVLSYS 369
+I + ++ SV +Y+
Sbjct: 563 KIIEMSSIP-SVAAYN 577
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 145/323 (44%), Gaps = 17/323 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD +NT+I C + +A ++ M +V + +Y+ LI C G DKA L
Sbjct: 148 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 207
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
+E+ K + P ++ + LC+ GK R+A+ ++ +MK G D +Y
Sbjct: 208 LNEMVLKNV-------NPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNA 260
Query: 128 VIMGHC---REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ G+ G +N + ++ M DV Y +I G + AM+ E M
Sbjct: 261 LMDGYFLVKEAGKAKNVFNIMAQM---GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMR 317
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ +P + S++ L + G + + + M DR N+ T I+ L D
Sbjct: 318 NENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVD 377
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA +++ + +G + +V LCK G+L +A+K+ L HNVD+ + +I
Sbjct: 378 KAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMI 437
Query: 302 LGLCEINRVLEAFGLCYELVEKG 324
GLC+ + EA L ++ +KG
Sbjct: 438 NGLCKESLFDEALTLLSKMEDKG 460
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 158/359 (44%), Gaps = 21/359 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + T N LI+S+C ++ A VF + D +Y+ LIR LC G ++
Sbjct: 40 GIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKES 99
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D L + I L SY + LC+ G+T A R+LR+I + D +
Sbjct: 100 LNFHDRLVSQGIKLDH-------VSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVM 152
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL---QKDKPLLAMETLE 181
Y T+I G C++ + ++L M + P+V Y LI GF Q DK A L
Sbjct: 153 YNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDK---AFGLLN 209
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M+ + P T+++++ L ++G E+ + +M+ + ++ ++ F
Sbjct: 210 EMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVK 269
Query: 242 HRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDL 296
KA + ++ + G + ++ L K L EA LF + NV D+
Sbjct: 270 EAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMD--LFEGMRNENVIPDVVA 327
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+++I GLC+ R+ A E+ ++G + L+ AL +V++A + K+I
Sbjct: 328 YSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKI 386
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + D +++ +I LDEA+ +FE M+N V D +YS LI LC+ G + A
Sbjct: 285 GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSA 344
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
K DE+ ++ G P +Y + LC+ + KA +L++I +G Q + +
Sbjct: 345 LKYVDEMHDR-------GQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYT 397
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G C++G + ++ +L + DV Y +I+G ++ A+ L KM
Sbjct: 398 YNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKME 457
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+P + +I+ EK ++ ++ M+ R +
Sbjct: 458 DKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIARRL 496
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 10/243 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N L+ + +A VF M VT D SYS++I L + D+A
Sbjct: 250 GVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEA 309
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
LF+ + + ++ P +Y + LC+ G+ A + + ++ RG Q P +
Sbjct: 310 MDLFEGMRNENVI-------PDVVAYSSLIDGLCKSGRINSALKYVDEMHDRG-QPPNVI 361
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++I C+ + LL + + ++ Y+ L+DG + + A + + +
Sbjct: 362 TYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDL 421
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
L + T+ ++ L ++ E+ + M D+ + I F
Sbjct: 422 LMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMN 481
Query: 244 DKA 246
DKA
Sbjct: 482 DKA 484
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+ +LI + C + +D+A+ + + +K+ + A+ +Y+IL+ LC+ G
Sbjct: 353 DRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLT 412
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+K+F +L K G +Y + LC+ +A +L ++ +G D
Sbjct: 413 DAQKVFQDLLMK-------GHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDA 465
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I + + +LL M+ R L
Sbjct: 466 IAYETIINAFFEKDMNDKAEKLLREMIARRLL 497
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 150/341 (43%), Gaps = 16/341 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PD T +LI C G + +AL + + + SY LI LC+ G A
Sbjct: 40 GYDPDAITLTSLIKGLCLKGQIHQALHFHDKLAALGFRFNHVSYGTLINGLCKVGQTRAA 99
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQ-----YLCEHGKTRKAERVLRQIMKRGTQ 120
+L + + ++V G P +Y + C+ GK ++A+ V +MK+G +
Sbjct: 100 LQLLRRV-DGKLVQPDVGISPEVVTYSALISGFCILAFCKEGKVKEAKNVFAAMMKKGFK 158
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ ++Y +++ G+C + M + PD++ Y+ LI+GF + AM
Sbjct: 159 PNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNL 218
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
E+M +P T++S++ L + G + ++ M DR +I + ++ L
Sbjct: 219 FEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCK 278
Query: 240 HGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
+ H DKA ++ L +G + ++ LCK G+ +A+ + L +N++++
Sbjct: 279 NHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNT 338
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVT 337
+I C EA + ++ E G C+ + VT
Sbjct: 339 YTVMIHVFCNNGMFGEALAMLSKMEENG------CIPNAVT 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 112/254 (44%), Gaps = 8/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ T+++L+ +C +++A +F NM V D SY+ILI C+ D A
Sbjct: 156 GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAA 215
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF+E+ ++I+ P +Y + LC+ GK A +++ ++ RG D ++
Sbjct: 216 MNLFEEMHCRKII-------PNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 268
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ C+ + LL + + P++ Y LI+G + +P A E +L
Sbjct: 269 YSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLL 328
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y +T+ ++ G E+ + M + N I LF D
Sbjct: 329 VKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDEND 388
Query: 245 KAFEIVELLYKKGF 258
KA +++ + +G
Sbjct: 389 KAEKLLLEMITRGL 402
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 8/220 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG +PD ++N LI+ C D A+ +FE M ++ + +Y+ LI LC+ G
Sbjct: 190 GGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISY 249
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
A KL DE+ ++ G P +Y + LC++ KA +L ++ +G Q +
Sbjct: 250 ALKLVDEMHDR-------GQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMY 302
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I G C+ G E+ + +L + + +V Y +I F A+ L KM
Sbjct: 303 TYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKM 362
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
++ +P T+ I+ L +K ++ ++ + M+ R +
Sbjct: 363 EENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGL 402
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+++L+ + C ++D+A+ + +K+ + + +Y+ILI LC+ G +
Sbjct: 259 DRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPE 318
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ +F++L K G +Y + C +G +A +L ++ + G +
Sbjct: 319 DAQNIFEDLLVK-------GYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNA 371
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y +I + + +LL+ M+ R L
Sbjct: 372 VTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 403
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 42/377 (11%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P TFNT++ S C G + A++V + M+ F + SY++L+ L +G++D+A++L
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKEL 264
Query: 69 FD------------------------ELFEKEIVLCK----FGSQPLAASYKPIFQYLCE 100
+ E+FE+ L + G+ P +Y I LC
Sbjct: 265 IEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCR 324
Query: 101 HGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
G+ A R L ++ D +SY T+I G+ R G + L + ++ +P V
Sbjct: 325 LGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVT 384
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
Y+ LIDG + +A + M+K P T+ ++ + G + + ML
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEML 444
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLP 276
R ++ + T I G+ KAF + E + +GF + ++ LCK G
Sbjct: 445 SRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD 504
Query: 277 EARKLL----LFSLKNHHNVDIDLCNA-VILGLCEINRVLEAFGLCYELVEKGLHQELTC 331
+A +L+ L + H + +A +I GL + + E F ++++KG+H +
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGL--LRKAEEVFS---DMLKKGIHPSVVT 559
Query: 332 LNDLVTALEARGKVEEA 348
L+ + RG+++ A
Sbjct: 560 YTVLIHSYAVRGRLDFA 576
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 14/330 (4%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M G G P T+NT+++S C G + +A + + M N + D SY+ LI + G
Sbjct: 303 MLGRGAL-PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLG 361
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT- 119
++ +A LF EL K +V P +Y + C G A+ + ++K G
Sbjct: 362 NFAEALLLFSELRSKNLV-------PSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLC 414
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D +++ ++ G C+ G EL ML R PD Y I G L+ P A
Sbjct: 415 PDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGM 474
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKG-FPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
E+M + P T++ ++ L + G F + V M L+ + ++ T I
Sbjct: 475 KEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTY-TSIIHAHL 533
Query: 239 GHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
G KA E+ + KKG V ++ RG+L A+K + ++
Sbjct: 534 ISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVI 593
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGL 325
NA+I GLC+ N + A+ L E+ KG+
Sbjct: 594 TYNALIYGLCKENMMDVAYNLFAEMESKGV 623
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 123/290 (42%), Gaps = 32/290 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD T+N LI+ C GN D+A ++ + M+ + D +Y+ +I G KA
Sbjct: 482 GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
E++F ++ +K G P +Y + G+ A++ ++ +G + + ++
Sbjct: 542 EEVFSDMLKK-------GIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVIT 594
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+E + Y L M + P+ Y LI+ A++ + ML
Sbjct: 595 YNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDML 654
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN--------INLSTKSIE- 235
P + T HS L + L K + + V+ L+ IR+ INL +K I
Sbjct: 655 DREIKPDSCT-HSALMKHLSKDY----KLLAVLRLENVIREGDTWKSVGFINLDSKEINS 709
Query: 236 -------LLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEA 278
+ + F + + K GF +E + LC + ++ +A
Sbjct: 710 TWIAEGFVKLEESKNNSHFRAIHVFEKGGF---LEPFLGKLCAKSRVLKA 756
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 150/331 (45%), Gaps = 20/331 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ F +I C G++ +A ++ E M + +++ LI LC++G +
Sbjct: 208 DMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTE 267
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
KA +LF +L E +P +Y + C K +AE +L ++ ++G +
Sbjct: 268 KAFRLFLKLVRSE------NHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNT 321
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y T+I GHC+ G +E Y+L+ M F P++ Y+ +++G ++ + A + LE
Sbjct: 322 NTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLED 381
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
++ P T++ L+ + E+ R + + ++ ++ I S L
Sbjct: 382 GFQNGLKPDKFTYNI----LMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFC 437
Query: 243 RDKAFEIVELLYKKGFCVKI-------EEVVQFLCKRGKLPEARKLLLFSLKNHHNV-DI 294
R+ + E+ +++ + I ++ C+ G L A K L +H D
Sbjct: 438 RENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMK-FFHRLSDHGCAPDS 496
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
A+I GLC+ ++ EA L ++EKGL
Sbjct: 497 ITYGAIISGLCKQSKRDEARSLYDSMIEKGL 527
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 165/350 (47%), Gaps = 12/350 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P+T T N +I G ++ A +FE M V DS SY +++ C+ G+
Sbjct: 103 NQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNIL 162
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+A+K + E+ V+ A++ I G T +A R+++ G + L
Sbjct: 163 EADKWLSVMLERGFVVDN-------ATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNL 215
Query: 124 -SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++ +I G C+ G+ + +E+L M+ + + P+V + LIDG +K A K
Sbjct: 216 INFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLK 275
Query: 183 MLKS-SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+++S ++ P T+ ++++ + + + + M ++ + N N T I+ G
Sbjct: 276 LVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAG 335
Query: 242 HRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+ ++A++++ L+ +GF + +V LCKRG++ EA K+L +N D N
Sbjct: 336 NFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYN 395
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ C+ + +A L ++++ G+ ++ L+ +++E+
Sbjct: 396 ILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKES 445
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 148/331 (44%), Gaps = 31/331 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+T T+ TLI HC AGN + A + M + + + +Y+ ++ LC+RG +A
Sbjct: 316 GLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEA 375
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
K+ ++ F+ G +P +Y + C+ R+A + +++K G Q D S
Sbjct: 376 YKMLEDGFQN-------GLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHS 428
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I CRE + +R +P + Y +I G+ ++ LAM+ ++
Sbjct: 429 YTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLS 488
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P + T+ +I++ L ++ E+ + M+++ + + I L + + D
Sbjct: 489 DHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGL---VPCEVTRITLAYEYCKVD 545
Query: 245 ---KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A I+E L KK + +V+ LC K+ A +L + +D+DL
Sbjct: 546 DCLSAMVILERLEKKLWIRTATTMVRKLCSEKKVGMA------ALFFNKLLDMDL----- 594
Query: 302 LGLCEINRV-LEAF-GLCYELVEKGLHQELT 330
+NRV L AF CYE L +L+
Sbjct: 595 ----HVNRVILAAFMTACYETNNYALVSDLS 621
>Medtr7g060720.1 | PPR containing plant-like protein, putative | HC
| chr7:21955726-21958466 | 20130731
Length = 535
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 158/351 (45%), Gaps = 18/351 (5%)
Query: 8 SPDTC----TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
SP C T+I + AG ALK F +++F + S + L+ +L Q Y
Sbjct: 113 SPPHCCGEEPIVTVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYR 172
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A +F E+ VL P S + + LC+ + A +VL ++ G +
Sbjct: 173 LAFLVFKNCGERFRVL------PNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNV 226
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY TV+ G G + ++ +L R + PDV Y L+DGF + K + A+ ++
Sbjct: 227 VSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDI 286
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M + P T+ ++ ++ E+ + M+ +++ L K ++LL G+
Sbjct: 287 MEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGN 346
Query: 243 RDKAFEIVELLYKKGF----CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC- 297
+KA E+ ++ +K V + ++ +LCK+GK+ EAR +F +V L
Sbjct: 347 VEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARN--VFDEFGKGSVASLLTY 404
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N +I GLCE + EA L ++VEKG+ N L+ G +E
Sbjct: 405 NTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEG 455
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 31/262 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G+SPD ++ L+ C G L +A++V + M++ V + +Y ++I+ C+
Sbjct: 254 DRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSG 313
Query: 64 KAEKLFDELFEKEIV------------LCKFGSQPLAAS-----------------YKPI 94
+A L +++ K++V LC+ G+ A +
Sbjct: 314 EAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTL 373
Query: 95 FQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
+LC+ GK +A V + K L+Y T+I G C G L M+ +
Sbjct: 374 IHWLCKKGKVLEARNVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVA 433
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL-ARLLEKGFPHESAR 213
P+ Y+ LI GF + + LE+ML++ LP ST+ ++ LL G E +
Sbjct: 434 PNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQEINK 493
Query: 214 VTVMMLDRNIRQNI-NLSTKSI 234
V + + + ++ N+ K +
Sbjct: 494 VVSLAMSTGVDADLWNIFVKPV 515
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ ++ T++ G++D A+KVF + + + D SY++L+ C+ G A
Sbjct: 221 GLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDA 280
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR----GTQD 121
++ D + + G +P +Y + Q C+ K+ +A ++ ++ + G++
Sbjct: 281 IRVMDIMEDN-------GVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSEL 333
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDF-LPDVEIYDCLIDGFLQKDKPLLAMETL 180
+ ++ C EG E E+ + R++ L + LI +K K L A
Sbjct: 334 CCKVVDLL---CEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVF 390
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
++ K S + T+++++A L E G E+AR+ M+++ + N
Sbjct: 391 DEFGKGS-VASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPN 435
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 145/309 (46%), Gaps = 19/309 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P +FNTLI +C + N++E + M++ +++ D +YS LI LC+ ++A
Sbjct: 256 GLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEA 315
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
LFDE +C+ G P ++ + C+HGK A R + RG + D ++
Sbjct: 316 NGLFDE-------MCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLIT 368
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G CR+G + +LL M+ F PD + L+DG + A+E ++M+
Sbjct: 369 YNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMV 428
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ + ++++ L G ++ R+ ML + + T I+ G
Sbjct: 429 EEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVK 488
Query: 245 KAFEIVELLYKKGFCVKIEEVVQF------LCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
++++ + + G ++ VV + CK+G++ A K+LL ++ N V D+
Sbjct: 489 MGAKLLKEMQRDG---RVPGVVTYNALMNGFCKQGQMKNA-KMLLHAMLNMEVVPNDITF 544
Query: 299 AVIL-GLCE 306
++L G C+
Sbjct: 545 NILLDGHCK 553
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+N LI+ C G+L EA K+ M D +++ L+ C+ GD D
Sbjct: 359 DRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMD 418
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A ++ D + E+ I L ++ + LC G+ R AER+L+ ++ G + D
Sbjct: 419 SALEIKDRMVEEGIELDD-------VAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDD 471
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y VI C++G + G +LL M R +P V Y+ L++GF ++ + A L
Sbjct: 472 PTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHA 531
Query: 183 MLKSSYLPKTSTWHSIL 199
ML +P T++ +L
Sbjct: 532 MLNMEVVPNDITFNILL 548
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 127/308 (41%), Gaps = 13/308 (4%)
Query: 49 YSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE 108
++IL+ C+ GD A +FDE+ + G +P S+ + C K +
Sbjct: 229 FNILMHGFCKIGDVMNARMVFDEISRR-------GLRPSVVSFNTLISGYCR-SKNVEEG 280
Query: 109 RVLRQIM--KRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
VL+ +M +R + D +Y +I G C+E E L M +P+ + LIDG
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+ K LA+ E M P T+++++ L G E+ ++ M+ + +
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 227 INLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLL 283
T ++ G D A EI + + ++G V ++ LC+ G++ +A ++L
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460
Query: 284 FSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARG 343
L H D VI C+ V L E+ G + N L+ +G
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQG 520
Query: 344 KVEEAAFI 351
+++ A +
Sbjct: 521 QMKNAKML 528
>Medtr7g024140.1 | PPR containing plant-like protein, putative | HC
| chr7:7909644-7911925 | 20130731
Length = 457
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 137/349 (39%), Gaps = 12/349 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD T+NTLI +C +D A + MK + D SY+ L ++ K+
Sbjct: 37 GLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKS 96
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
LFDE+ + G +P SY + GK +A V R I +RG P
Sbjct: 97 LDLFDEMLQS-------GIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMA 149
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY +I G C+ G N L + RR F+P+V Y+ +I+G + + A L +
Sbjct: 150 SYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEF 209
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ P T+ +++ G + + M + + + L G
Sbjct: 210 CDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRI 269
Query: 244 DKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++A EI E + G ++ C++G+ EA +L+ K D +
Sbjct: 270 EEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTII 329
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
I GLC+ A + G L N ++ L G +++A
Sbjct: 330 IHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAV 378
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P ++N +I+ C G ++ AL +F N++ + +Y+ +I LC+
Sbjct: 142 GEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLAD 201
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
A ++ +E C FG +P A +Y + + G+ + +L ++ ++G T D
Sbjct: 202 ARRVLNEF-------CDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGF 254
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y TV+ + G E E+ M+ +PD+ Y+ +I+ F ++ + A+ ++++
Sbjct: 255 AYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEI 314
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
K T I+ L + G + + M N+ ++ L G
Sbjct: 315 EKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDI 374
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
DKA ++ + + K ++ LC+ K A KLL+ S+++ + AVI G
Sbjct: 375 DKAVKVFDSMEVKD-SFTYTSLLHNLCRAKKFRIASKLLVASIEDGFQILRATQRAVIDG 433
Query: 304 LCEINRVLEA 313
L V EA
Sbjct: 434 LTTSGLVYEA 443
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 124/283 (43%), Gaps = 10/283 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G +PD ++N+L L ++L +F+ M + D SY+IL+ + G +
Sbjct: 70 EAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPE 129
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A +F ++FE+ + P ASY + LC++G A + R + +RG +
Sbjct: 130 EANGVFRDIFERGEIY------PSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEV 183
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
L+Y +I G C+ + +L F P+ Y ++ + + +E L +
Sbjct: 184 LTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSE 243
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M + + + +++A L++ G E+ + M+ + ++ I L G
Sbjct: 244 MRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGR 303
Query: 243 RDKAFEIVELLYKKGF-CVKIEE--VVQFLCKRGKLPEARKLL 282
D+A +V+ + K+G C + ++ LCK G A K L
Sbjct: 304 FDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHL 346
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 123/268 (45%), Gaps = 15/268 (5%)
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
+C+ + KAE VL +K G D ++Y T+I G+CR + Y +L M PD
Sbjct: 17 MCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPD 76
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
V Y+ L G ++K +++ ++ML+S P +++ ++ G P E+ V
Sbjct: 77 VVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFR 136
Query: 217 MMLDRN-IRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKR 272
+ +R I ++ I L +G+ + A + L ++GF ++ ++ LCK
Sbjct: 137 DIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKA 196
Query: 273 GKLPEARKLLL----FSLKNHHNVDIDLCNAVILGLC-EINRVLEAFGLCYELVEKGLHQ 327
+L +AR++L F + + + ++ C R+ + + E+ KG
Sbjct: 197 RRLADARRVLNEFCDFGFEPNA-----ITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTF 251
Query: 328 ELTCLNDLVTALEARGKVEEAAFISKRI 355
+ +V AL G++EEA I++++
Sbjct: 252 DGFAYCTVVAALVKTGRIEEADEIAEKM 279
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 11/351 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD TFN LI+ C G+L+ A V + D+ + + LI+ LC G +A
Sbjct: 97 PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF 156
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
D++ K G SY + LC+ G+TR A +VLR+I Q + + Y T
Sbjct: 157 HDDVIAK-------GFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNT 209
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I C++ + +L M+ + PDV Y LI G L + A+ +ML +
Sbjct: 210 IIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKN 269
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T++ ++ L ++G ++ V +M+ + + NI ++ F +KA
Sbjct: 270 IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ + ++G ++ ++ LCK + EA L + N++I GL
Sbjct: 330 FVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+ R+ +A+ L E+ +G ++ + L+ AL +V++A + +I
Sbjct: 390 LKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKI 440
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 156/345 (45%), Gaps = 11/345 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +NT+I S C + A + M ++ D +Y+ LI G +A L
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
F+++ K I +P ++ + LC+ G+ +KA VL ++K+G + ++Y +
Sbjct: 262 FNQMLLKNI-------KPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNS 314
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+ + M RR PDV+ Y +I+G + A+ ++M S
Sbjct: 315 LMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKS 374
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T T++S++ LL+ G ++ + M +R ++ + ++ L + DKA
Sbjct: 375 MAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAI 434
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ + +G I +V LCK G+L +A+ + L +++D+ + N ++ GL
Sbjct: 435 TLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGL 494
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
C+ EA L ++ + G + LV AL K ++A
Sbjct: 495 CKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAV 539
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PDT T TLI C G + EAL +++ D SY LI LC+ G+ A
Sbjct: 129 GFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAA 188
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
++ ++ + +V QP Y I LC+ A + + I+KR D ++
Sbjct: 189 LQVLRKI-DGLLV------QPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVT 241
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G G + L ML ++ PDV ++ L+DG ++ + A L M+
Sbjct: 242 YTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMI 301
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K T++S++ +++ V M R + ++ + I L D
Sbjct: 302 KQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVD 361
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + ++ K V ++ L K G++ +A L+ D+ ++++
Sbjct: 362 EAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLL 421
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ ++V +A L ++ ++G+ + LV L G++++A
Sbjct: 422 DALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDA 468
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 150/344 (43%), Gaps = 21/344 (6%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
FN ++ S + A+ + M+ Q+ D +++ILI C G + A + ++F
Sbjct: 67 FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGH 132
K G P + + + LC +GK R+A ++ +G D +SY T+I G
Sbjct: 127 -------KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGL 179
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLL-AMETLEKMLKSSYLPK 191
C+ G ++L + P+V +Y+ +ID L KDK ++ A + +M+ P
Sbjct: 180 CKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDS-LCKDKLVIHASDLCSEMIVKRIFPD 238
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+ +++ L G E+ + ML +NI+ ++ ++ L G KA ++
Sbjct: 239 VVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLA 298
Query: 252 LLYKKGFCVKIEEVVQ-----FLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNAVILGL 304
++ K+G I FL K+ E + +F+ V D+ + +I GL
Sbjct: 299 VMIKQGVDSNIVTYNSLMDGYFLVKQ----ENKATFVFNTMARRGVTPDVQSYSIMINGL 354
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ V EA L E+ K + N L+ L G++ +A
Sbjct: 355 CKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDA 398
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 112/230 (48%), Gaps = 8/230 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD +++ +I+ C +DEA+ +F+ M + + ++ +Y+ LI L + G A
Sbjct: 339 GVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDA 398
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
L +E+ + G +Y + LC++ + KA ++ +I +G Q + +
Sbjct: 399 WDLVNEMHNR-------GQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYT 451
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G C+ G ++ + +L + + DV++Y+ +++G ++ A+ + KM
Sbjct: 452 YTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKME 511
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI 234
+ +P T+ +++ L E ++ ++ M+ + N+S+ S+
Sbjct: 512 DNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSM 561
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 8/256 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + T+N+L+ + ++A VF M VT D SYSI+I LC+ D+A
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF E+ K + P +Y + L ++G+ A ++ ++ RG D ++
Sbjct: 364 VNLFKEMHSKSMA-------PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVIT 416
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ C+ + L+ + + P++ Y L+DG + + A + +L
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL 476
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y ++ ++ L ++G E+ + M D + + LF + D
Sbjct: 477 IKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKND 536
Query: 245 KAFEIVELLYKKGFCV 260
KA +++ + +G V
Sbjct: 537 KAVKLLREMIVQGSAV 552
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+ L+ C G L +A V++++ D Y++++ LC+ G +D
Sbjct: 442 DQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFD 501
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT 119
+A L ++ + G P A +Y+ + + L E+ K KA ++LR+++ +G+
Sbjct: 502 EALSLVSKMEDN-------GCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGS 550
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 163/375 (43%), Gaps = 39/375 (10%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF D + T+I+ C G +A+++F MK +V + Y+ +I LC++G D
Sbjct: 168 DRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVD 227
Query: 64 KAEKLFDELFEKEIVL------------CKFGS-----------------QPLAASYKPI 94
+A L E+ E I L C G P ++ +
Sbjct: 228 EACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNIL 287
Query: 95 FQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDF 153
LC+ G+ +A V+ ++KRG + D +SY ++ G+C G+ ++ M+ R
Sbjct: 288 IDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTA 347
Query: 154 LPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP-HESA 212
LP+V Y LI+G+ + AM L +M + +P T T++ +L L + G +E
Sbjct: 348 LPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWD 407
Query: 213 RVTVMMLDRNIRQNINLSTKSIEL--LFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQ 267
V M R Q +L T ++ L F H DKA + + + + G I ++
Sbjct: 408 LVEAM---RASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLD 464
Query: 268 FLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQ 327
LCK G+L A+++ +I N +I GLC+ + EA L Y++V
Sbjct: 465 GLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLP 524
Query: 328 ELTCLNDLVTALEAR 342
+ +V A+ +
Sbjct: 525 NYITFDTIVRAILVK 539
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 116/299 (38%), Gaps = 40/299 (13%)
Query: 52 LIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL 111
L+ L + Y+ L+ L K + +P ++ + + G+ A +L
Sbjct: 75 LLSTLIKLKRYNAVVSLYTILQSKPTI------KPSLITFSILINAFAQLGQMGFAFSLL 128
Query: 112 RQIMKRGTQDPLSYMTVIM-GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQK 170
I+K G Q + +T +M G C +G LL + R F D Y +I+G +
Sbjct: 129 GNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKI 188
Query: 171 DKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLS 230
K A++ KM K P +++++ L ++G E+ + M++ I ++
Sbjct: 189 GKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSY 248
Query: 231 TKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLL-LFSLKNH 289
I HG C G+ A KLL ++
Sbjct: 249 NSMI-----HG---------------------------FCSVGRFQAAVKLLDEMVVRGK 276
Query: 290 HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
D+ N +I GLC++ RV EA+ + ++++G ++ N L+ G V EA
Sbjct: 277 VYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEA 335
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 177/415 (42%), Gaps = 47/415 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +N +I +C G+L A +VFE +K +Y LI C+ G +
Sbjct: 235 GCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVV 294
Query: 66 EKLFDEL-----------FEKEI-----------------VLCKFGSQPLAASYKPIFQY 97
++L +E+ F I ++ + G +P +Y + +
Sbjct: 295 DQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINF 354
Query: 98 LCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
C G+ ++AE L + +R + SY ++ +C++G Y ++L + PD
Sbjct: 355 SCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPD 414
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKG-FPHESARVT 215
+ Y I G + + +A+ EKM++ P ++ +++ L +KG FP ++
Sbjct: 415 LVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLS 474
Query: 216 VMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKR 272
MLD N++ + + ++ + DKA E+ E++ KG V +++ LCK
Sbjct: 475 -EMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKC 533
Query: 273 GKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC---EINRVLEAFGLCYELVEKGLHQEL 329
GK+ +A + +H D + VI G +++ L+ FG +++++ +
Sbjct: 534 GKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFG---QMMKQKYKPNV 590
Query: 330 TCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYS------SKKSRPNKA 378
L+ + A + + + NL+ +V++Y+ SK +P KA
Sbjct: 591 VAYTSLINGFCKIADMSRAEKVFRAMQSF-NLEPNVVTYTILIGGFSKTGKPEKA 644
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 147/365 (40%), Gaps = 31/365 (8%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
+ G PD ++ IH + G +D AL V E M V D+ Y++L+ LC++G +
Sbjct: 407 AETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRF 466
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
A+ L E+ + + QP A Y + + + KA + +M +G DP
Sbjct: 467 PAAKLLLSEMLDLNL-------QPDAYMYATLVDGFIRNNELDKATELFEVVMSKGI-DP 518
Query: 123 --LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
+ Y +I G C+ G + + M + PD + +IDG++++ A++
Sbjct: 519 GVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMF 578
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+M+K Y P + S++ + + +V M N+ N+ T I
Sbjct: 579 GQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKT 638
Query: 241 GHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHN-----VD-- 293
G +KA EL+ C+ + +L L L KN N +D
Sbjct: 639 GKPEKAASFFELMLMNN-CLPNDTTFHYLIN--GLTNITNTTLLIEKNEENDRSLILDFF 695
Query: 294 -----------IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEAR 342
I N++I+ LC+ V A L +++ KG + C + L+ L
Sbjct: 696 ATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQT 755
Query: 343 GKVEE 347
GK +E
Sbjct: 756 GKSKE 760
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 8/207 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M + G PD T+N LI+ CS G + EA + E K + + SY+ L+ C++G
Sbjct: 335 MMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQG 394
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT- 119
DY A D LF+ + + G +P SY G+ A V ++M++G
Sbjct: 395 DYVMAS---DMLFK----IAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVF 447
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D Y ++ G C++G + LL ML + PD +Y L+DGF++ ++ A E
Sbjct: 448 PDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATEL 507
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKG 206
E ++ P ++ ++ L + G
Sbjct: 508 FEVVMSKGIDPGVVGYNVMIKGLCKCG 534
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 155/375 (41%), Gaps = 19/375 (5%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQ-----VTADSASYSILIRNLCQRGD 61
F P N++I + G +D+A+K+F + V A+++ + L++N G
Sbjct: 124 FKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKN----GK 179
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIF--QYLCEHGKTRKAERVLRQIMKRG- 118
D A +L+D++ E+ G + +Y + + LC+ GK + +++ G
Sbjct: 180 VDVACELYDKMLERG---GDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGC 236
Query: 119 TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+ + Y +I G+C++G + + + + FLP +E Y LIDGF + K + +
Sbjct: 237 VPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQ 296
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
L +M ++SI+ + G ++A + MM + +I I
Sbjct: 297 LLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSC 356
Query: 239 GHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
G +A E +E ++ ++ CK+G A +L + D+
Sbjct: 357 SGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLV 416
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
A I G + A + +++EKG+ + N L++ L +G+ A + +
Sbjct: 417 SYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEM 476
Query: 356 PGLENLDRSVLSYSS 370
L NL Y++
Sbjct: 477 LDL-NLQPDAYMYAT 490
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 22/263 (8%)
Query: 33 VFENMKN--FQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCK-FGSQPLAA 89
V E+MKN F+ T ++ + I + + G DKA K+F ++C+ + P
Sbjct: 115 VLEDMKNRNFKPTLEALNSVICV--YAEYGFVDKAVKMF-------YMVCELYNCFPCVV 165
Query: 90 SYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-------DPLSYMTVIMGHCREGAYENGY 142
+ + L ++GK A + ++++RG D S + V+ G C G E G
Sbjct: 166 ANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGR 225
Query: 143 ELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARL 202
+L+ +P+V Y+ +IDG+ +K A E++ +LP T+ +++
Sbjct: 226 KLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGF 285
Query: 203 LEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI 262
+ G ++ M + N+ + I+ + +G DKA E++ ++ + G I
Sbjct: 286 CKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDI 345
Query: 263 EE---VVQFLCKRGKLPEARKLL 282
++ F C G++ EA + L
Sbjct: 346 TTYNILINFSCSGGRIKEAEEFL 368
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 140/323 (43%), Gaps = 11/323 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ N LI+ C G + A VF + ++ +++ LI+ LC +G +A
Sbjct: 117 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQA 176
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D+ L G Q SY + LC+ G+TR A +LR++ + Q + +
Sbjct: 177 LNFHDK-------LVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVM 229
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C++ + ++L M+ + P+V Y LI GF K A++ KM+
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMI 289
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ ++ + G + ++ M DR NI + ++ L D
Sbjct: 290 SENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVD 349
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA ++ L +G + ++ LC GKL +AR + L +++ + +
Sbjct: 350 KAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMF 409
Query: 302 LGLCEINRVLEAFGLCYELVEKG 324
G C+ EA L ++ E G
Sbjct: 410 YGFCKKGLFDEASALLSKMEENG 432
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP+ T++ LI + G L +A+ +F M + + D +++IL+ C+ G A
Sbjct: 257 GISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYA 316
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
KL DE+ ++ G P +Y I LC+ + KA +L ++ +G + + +
Sbjct: 317 LKLVDEMHDR-------GQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHT 369
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G E+ + +L + + V Y + GF +K A L KM
Sbjct: 370 YTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKME 429
Query: 185 KSSYLPKTSTWHSILARLLEKG 206
++ +P T+ I L +KG
Sbjct: 430 ENGCIPDAKTYELIKLSLFKKG 451
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 151/362 (41%), Gaps = 41/362 (11%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P FN ++ S + + L + + M+ + + + +ILI CQ G A
Sbjct: 84 TPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 143
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
+F ++ K G P ++ + + LC G+ +A +++ G Q + +SY
Sbjct: 144 VFAKIL-------KMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYG 196
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ G +LL + + P+V +Y +IDG + A + +M+
Sbjct: 197 TLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK 256
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T+ ++++ G ++ + M+ NI+ ++
Sbjct: 257 GISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDV-----------------YT 299
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
F I +V CK GK+ A KL+ +I ++++ LC+
Sbjct: 300 FNI---------------LVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 344
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVL 366
+RV +A L +L ++G+ + L+ L GK+E+A I + + ++ D +V+
Sbjct: 345 THRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLL-VKGYDITVV 403
Query: 367 SY 368
+Y
Sbjct: 404 TY 405
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSASYSILIRNLCQRGD 61
D G P+ T+ LI C++G L++A +FE++ K + +T +Y ++ C++G
Sbjct: 360 DQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITV--VTYIVMFYGFCKKGL 417
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ 113
+D+A L ++ E G P A +Y+ I L + G+ AE++ R+
Sbjct: 418 FDEASALLSKMEEN-------GCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 173/356 (48%), Gaps = 19/356 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGN---LDEALKVFENMKNFQVTADSASYSILIRNLC 57
M G G P+ T+NTL++++ + +DE LK+ M+ QV A+YSILI+
Sbjct: 242 MVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKL---MEKEQVVFSVATYSILIQWYS 298
Query: 58 QRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR 117
GD ++AEK+F+E+ EK I + + Y + + G ++A + ++ +R
Sbjct: 299 SSGDIEEAEKIFEEMREKNIEMDVY-------VYSSMISWSRRLGNMKRAFALFDEMSQR 351
Query: 118 G-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
+ +Y +I G C+ G E LL+ M + ++ I++ +DG+ ++ K A
Sbjct: 352 DIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEA 411
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV-MMLDRNIRQNINLSTKSIE 235
+ L+ +++ + ++ILA L K ++ A+ + M+++ ++ N+ T IE
Sbjct: 412 LR-LQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIE 470
Query: 236 LLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNV 292
+ G+ +A + + KKG I ++ CK+ K+ +A K+ +
Sbjct: 471 IYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLP 530
Query: 293 DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
D+ +++I G C + RV EA L E+ KG+ + + +++ L G+ +EA
Sbjct: 531 DLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEA 586
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 41/253 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + FNT + +C G +DEAL++ M+ + AD +Y+IL LC+ YD+A
Sbjct: 387 GVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEA 446
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+ + + + EK G +P ++ + C+ G +AER+ R + K+G
Sbjct: 447 KCILNSMVEK-------GVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGE------ 493
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+P++ Y+ LID + +K+K A + +M+
Sbjct: 494 ----------------------------VPNIITYNTLIDAYCKKEKVKQAHKIKSEMIN 525
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
LP T+ S++ G E+ ++ M + I +N+ T I L G D+
Sbjct: 526 KGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADE 585
Query: 246 AFEIVELLYKKGF 258
AF++ + + K G
Sbjct: 586 AFKLYDEMMKIGL 598
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 165/389 (42%), Gaps = 53/389 (13%)
Query: 25 GNLDEALKVFENM---KNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCK 81
G +D ++ F M F++ S +++I LC+RG+ +KA++L DE+ K IV
Sbjct: 194 GEVDFCVRFFHRMVESNKFEIRVQS--LTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPN 251
Query: 82 -FGSQPL----------------------------AASYKPIFQYLCEHGKTRKAERVLR 112
F L A+Y + Q+ G +AE++
Sbjct: 252 VFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFE 311
Query: 113 QIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKD 171
++ ++ + D Y ++I R G + + L M +RD +P+ Y LI G +
Sbjct: 312 EMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAG 371
Query: 172 KPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ A L +M +++ + +G E+ R+ +M + I N ++ T
Sbjct: 372 QMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGI--NADVFT 429
Query: 232 KSIELLFGHG----HR-DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLL 283
+I +G HR D+A I+ + +KG V ++ CK G L EA +L
Sbjct: 430 YNI---LANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFR 486
Query: 284 FSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARG 343
K +I N +I C+ +V +A + E++ KGL +L + L+ G
Sbjct: 487 DMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVG 546
Query: 344 KVEEA--AFISKRIPGLENLDRSVLSYSS 370
+V+EA F R+ G + R+V +Y+S
Sbjct: 547 RVDEALKLFNEMRLKG---ITRNVATYTS 572
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ TF I +C GNL EA ++F +M+ + +Y+ LI C++ +A
Sbjct: 457 GVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQA 516
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
K+ E+ K G P +Y + C G+ +A ++ ++ +G T++ +
Sbjct: 517 HKIKSEMINK-------GLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVAT 569
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPL 174
Y ++I G +EG + ++L M++ +PD ++ L+ F KPL
Sbjct: 570 YTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSF---HKPL 616
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 160/347 (46%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TFNTLI C G + EAL +++ + D SY LI LC+ G+ A
Sbjct: 128 GYQPDTITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAA 187
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
++ ++ E ++V Y I LC+ +A + + I KR + + ++
Sbjct: 188 LQMLRKI-EGKLV------NTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVT 240
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++I G C G +++ + L ++ ++ PDV ++ ++D ++ K A + M+
Sbjct: 241 FNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMM 300
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K +P T++S++ +++ V +++ + + + + I L D
Sbjct: 301 KECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVD 360
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + +G V ++ LCK G+ A L+ + H +I N++I
Sbjct: 361 EALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLI 420
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ +++ +A L ++ ++G+ ++ N L+ L G++ A
Sbjct: 421 DALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNA 467
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 151/345 (43%), Gaps = 11/345 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+ + ++T+I S C + EA ++ M +++ + +++ LI C G + A +
Sbjct: 200 NTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFR 259
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
LF E+ K I P ++ + LC+ GK ++A+ V+ +MK D ++Y
Sbjct: 260 LFHEIVLKNI-------NPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYN 312
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+++ G+C +LI + + PD Y +I+G + A+ +M
Sbjct: 313 SLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCR 372
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T T+ S++ L + G + + M D NI I+ L + DKA
Sbjct: 373 GIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKA 432
Query: 247 FEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+V+ + +G ++ LCK G+L AR + L +++D+ N +I G
Sbjct: 433 IALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMING 492
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC++ EA L ++ + G+ + ++ A + + E+A
Sbjct: 493 LCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKA 537
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+PD +++ +I+ C +DEAL +F M+ + ++ +YS LI LC+ G Y A
Sbjct: 340 APDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWD 399
Query: 68 LFDEL------------------------FEKEIVLCK----FGSQPLAASYKPIFQYLC 99
L DE+ +K I L K G QP +Y + LC
Sbjct: 400 LVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLC 459
Query: 100 EHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVE 158
+ G+ A V + ++ +G + D +Y +I G C+ G ++ LL M +PD
Sbjct: 460 KGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAV 519
Query: 159 IYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
Y+ +I F KD+ A + L +M+ L
Sbjct: 520 TYETIIRAFFHKDENEKAEKLLREMIARGLL 550
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD CT+N LI C G L A VF+++ + D +Y+I+I LC+ G +D
Sbjct: 441 DQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFD 500
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+AE L ++ + I+ P A +Y+ I + + KAE++LR+++ RG
Sbjct: 501 EAEVLLSKMEDNGII-------PDAVTYETIIRAFFHKDENEKAEKLLREMIARG 548
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N+LI + C +D+A+ + + +K+ + D +Y+ILI LC+ G
Sbjct: 406 DHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLH 465
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A +F +L K G +Y + LC+ G +AE +L ++ G D
Sbjct: 466 NARDVFQDLLIK-------GYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDA 518
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I + E +LL M+ R L
Sbjct: 519 VTYETIIRAFFHKDENEKAEKLLREMIARGLL 550
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 160/347 (46%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TFNTLI C G + EAL +++ + D SY LI LC+ G+ A
Sbjct: 128 GYQPDTITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAA 187
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
++ ++ E ++V Y I LC+ +A + + I KR + + ++
Sbjct: 188 LQMLRKI-EGKLV------NTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVT 240
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++I G C G +++ + L ++ ++ PDV ++ ++D ++ K A + M+
Sbjct: 241 FNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMM 300
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K +P T++S++ +++ V +++ + + + + I L D
Sbjct: 301 KECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVD 360
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + +G V ++ LCK G+ A L+ + H +I N++I
Sbjct: 361 EALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLI 420
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ +++ +A L ++ ++G+ ++ N L+ L G++ A
Sbjct: 421 DALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNA 467
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 151/345 (43%), Gaps = 11/345 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+ + ++T+I S C + EA ++ M +++ + +++ LI C G + A +
Sbjct: 200 NTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFR 259
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
LF E+ K I P ++ + LC+ GK ++A+ V+ +MK D ++Y
Sbjct: 260 LFHEIVLKNI-------NPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYN 312
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+++ G+C +LI + + PD Y +I+G + A+ +M
Sbjct: 313 SLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCR 372
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T T+ S++ L + G + + M D NI I+ L + DKA
Sbjct: 373 GIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKA 432
Query: 247 FEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+V+ + +G ++ LCK G+L AR + L +++D+ N +I G
Sbjct: 433 IALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMING 492
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC++ EA L ++ + G+ + ++ A + + E+A
Sbjct: 493 LCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKA 537
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+PD +++ +I+ C +DEAL +F M+ + ++ +YS LI LC+ G Y A
Sbjct: 340 APDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWD 399
Query: 68 LFDEL------------------------FEKEIVLCK----FGSQPLAASYKPIFQYLC 99
L DE+ +K I L K G QP +Y + LC
Sbjct: 400 LVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLC 459
Query: 100 EHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVE 158
+ G+ A V + ++ +G + D +Y +I G C+ G ++ LL M +PD
Sbjct: 460 KGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAV 519
Query: 159 IYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
Y+ +I F KD+ A + L +M+ L
Sbjct: 520 TYETIIRAFFHKDENEKAEKLLREMIARGLL 550
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD CT+N LI C G L A VF+++ + D +Y+I+I LC+ G +D
Sbjct: 441 DQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFD 500
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+AE L ++ + I+ P A +Y+ I + + KAE++LR+++ RG
Sbjct: 501 EAEVLLSKMEDNGII-------PDAVTYETIIRAFFHKDENEKAEKLLREMIARG 548
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N+LI + C +D+A+ + + +K+ + D +Y+ILI LC+ G
Sbjct: 406 DHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLH 465
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A +F +L K G +Y + LC+ G +AE +L ++ G D
Sbjct: 466 NARDVFQDLLIK-------GYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDA 518
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I + E +LL M+ R L
Sbjct: 519 VTYETIIRAFFHKDENEKAEKLLREMIARGLL 550
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 160/347 (46%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TFNTLI C G + EAL +++ + D SY LI LC+ G+ A
Sbjct: 128 GYQPDTITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAA 187
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
++ ++ E ++V Y I LC+ +A + + I KR + + ++
Sbjct: 188 LQMLRKI-EGKLV------NTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVT 240
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++I G C G +++ + L ++ ++ PDV ++ ++D ++ K A + M+
Sbjct: 241 FNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMM 300
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K +P T++S++ +++ V +++ + + + + I L D
Sbjct: 301 KECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVD 360
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + +G V ++ LCK G+ A L+ + H +I N++I
Sbjct: 361 EALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLI 420
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ +++ +A L ++ ++G+ ++ N L+ L G++ A
Sbjct: 421 DALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNA 467
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 151/345 (43%), Gaps = 11/345 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+ + ++T+I S C + EA ++ M +++ + +++ LI C G + A +
Sbjct: 200 NTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFR 259
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
LF E+ K I P ++ + LC+ GK ++A+ V+ +MK D ++Y
Sbjct: 260 LFHEIVLKNI-------NPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYN 312
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+++ G+C +LI + + PD Y +I+G + A+ +M
Sbjct: 313 SLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCR 372
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T T+ S++ L + G + + M D NI I+ L + DKA
Sbjct: 373 GIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKA 432
Query: 247 FEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+V+ + +G ++ LCK G+L AR + L +++D+ N +I G
Sbjct: 433 IALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMING 492
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC++ EA L ++ + G+ + ++ A + + E+A
Sbjct: 493 LCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKA 537
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+PD +++ +I+ C +DEAL +F M+ + ++ +YS LI LC+ G Y A
Sbjct: 340 APDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWD 399
Query: 68 LFDEL------------------------FEKEIVLCK----FGSQPLAASYKPIFQYLC 99
L DE+ +K I L K G QP +Y + LC
Sbjct: 400 LVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLC 459
Query: 100 EHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVE 158
+ G+ A V + ++ +G + D +Y +I G C+ G ++ LL M +PD
Sbjct: 460 KGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAV 519
Query: 159 IYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
Y+ +I F KD+ A + L +M+ L
Sbjct: 520 TYETIIRAFFHKDENEKAEKLLREMIARGLL 550
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD CT+N LI C G L A VF+++ + D +Y+I+I LC+ G +D
Sbjct: 441 DQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFD 500
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+AE L ++ + I+ P A +Y+ I + + KAE++LR+++ RG
Sbjct: 501 EAEVLLSKMEDNGII-------PDAVTYETIIRAFFHKDENEKAEKLLREMIARG 548
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N+LI + C +D+A+ + + +K+ + D +Y+ILI LC+ G
Sbjct: 406 DHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLH 465
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A +F +L K G +Y + LC+ G +AE +L ++ G D
Sbjct: 466 NARDVFQDLLIK-------GYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDA 518
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I + E +LL M+ R L
Sbjct: 519 VTYETIIRAFFHKDENEKAEKLLREMIARGLL 550
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 147/339 (43%), Gaps = 29/339 (8%)
Query: 4 DGGF-SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
DG F PD +NT+I C ++++A ++ M +++ + +YS LI C G
Sbjct: 200 DGKFVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVG-- 257
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
K + FD F K I + G C+ G+ ++A+ VL +MK+G + D
Sbjct: 258 -KLKDAFD-FFNKMIFILVDG--------------FCKEGRVKEAKNVLAMMMKQGIKPD 301
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y +++ G+C + M R + + Y +I+GF + AM+ +
Sbjct: 302 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFK 361
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M P T+ +++ L + G + ++ M DR + NI ++ L
Sbjct: 362 EMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSILDALCKTH 421
Query: 242 HRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
DKA ++ +G + ++ LCK G+L +AR + L +N+ ++
Sbjct: 422 QVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDARNIFEDLLVKGYNITVNTYT 481
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVT 337
+I G C + E+ L ++ E G C+ D VT
Sbjct: 482 VMIQGFCSHGLLDESLALLSKMEENG------CIPDAVT 514
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 162/370 (43%), Gaps = 27/370 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + D T + LI+S C G++ A V + D+ +++ LI+ LC +GD +A
Sbjct: 98 GIASDLVTCSILINSFCQLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQA 157
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D++ G SY + LC+ G+T A +LR+ + Q D +
Sbjct: 158 LHFHDKVIA-------MGFHLDQVSYGTLINGLCKVGETIAALELLRRFDGKFVQPDVVM 210
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C++ + ++L M+ + P+V Y LI GF K A + KM+
Sbjct: 211 YNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVGKLKDAFDFFNKMI 270
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ ++G E+ V MM+ + I+ ++ + ++ +
Sbjct: 271 -----------FILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVN 319
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNA 299
KA I + +G + ++ CK + EA K LF +H + D+ +A
Sbjct: 320 KAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMK--LFKEMHHKQIFPDVITYSA 377
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
+I GLC+ R+ A L ++ ++G+ + N ++ AL +V++A + + +
Sbjct: 378 LIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKD-Q 436
Query: 360 NLDRSVLSYS 369
+ SV +Y+
Sbjct: 437 GIQPSVYTYT 446
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + + +++ +I+ C +DEA+K+F+ M + Q+ D +YS LI LC+ G A
Sbjct: 332 GVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYA 391
Query: 66 EKLFDELFEKEIV------------LCKF----------------GSQPLAASYKPIFQY 97
+L D++ ++ + LCK G QP +Y +
Sbjct: 392 LQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDG 451
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC+ G+ + A + ++ +G + +Y +I G C G + LL M +PD
Sbjct: 452 LCKGGRLKDARNIFEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENGCIPD 511
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
Y+ +I KDK A + L +M+ L
Sbjct: 512 AVTYEIIICSLFDKDKNDKAEKLLREMITRGLL 544
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 152/363 (41%), Gaps = 21/363 (5%)
Query: 6 GFSPDTCTFNTLIHS----------HCSAGNLDEALKVFENMKNFQVTADSASYSILIRN 55
G+ P+T T NTLI HC G L +A+ +F M + D +++IL+
Sbjct: 127 GYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDG 186
Query: 56 LCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM 115
C+ G +A+ + + + G +P +Y + + KA+ + +
Sbjct: 187 FCKEGRVKEAKNVLAMMMIQ-------GIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA 239
Query: 116 KRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPL 174
+ G + D SY +I G C+ + ELL M + +P+V Y LIDG + K
Sbjct: 240 QLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKIS 299
Query: 175 LAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI 234
A++ +++M P T+ SIL L + + + M ++ I+ N+ T I
Sbjct: 300 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359
Query: 235 ELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHN 291
+ L G + A ++ E L KG + + ++Q C +G EA LL N
Sbjct: 360 KGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCI 419
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
+ +IL L + + A L E++E + NDL+ ++ G + +
Sbjct: 420 PNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGSSPGNSLL 479
Query: 352 SKR 354
K+
Sbjct: 480 CKK 482
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 13/329 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD-YDK 64
G P+ N LI+S C G++ A V + ++ + + LI+ LC G +DK
Sbjct: 92 GIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDK 151
Query: 65 ---AEKLFD--ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT 119
KL D +LF K I+ P ++ + C+ G+ ++A+ VL +M +G
Sbjct: 152 HCIVGKLKDAVDLFNKMILE---NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGI 208
Query: 120 QDP-LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+ ++Y +++ G+ + M + PD++ Y LI+GF + AME
Sbjct: 209 KPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAME 268
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
L++M +P T+ S++ L + G + ++ M DR NI + ++ L
Sbjct: 269 LLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC 328
Query: 239 GHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
+ D A ++ + +G + +++ LC+ GKL +ARK+ L HN+++
Sbjct: 329 KNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVY 388
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKG 324
+I G C+ EA L ++ + G
Sbjct: 389 TYTVMIQGFCDKGLFDEALTLLSKMEDNG 417
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+++++ + C +D A+ + MKN + + +Y+ILI+ LCQ G +
Sbjct: 310 DRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLE 369
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A K+F++L K G +Y + Q C+ G +A +L ++ G +
Sbjct: 370 DARKVFEDLLVK-------GHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNA 422
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI 164
+Y +I+ ++ E +LL M+ +F V + + LI
Sbjct: 423 KTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLI 464
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 13/310 (4%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D +NT+I C +++A + M ++ +Y+ LI LC G A L
Sbjct: 208 DVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLL 267
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTV 128
++ + I P ++ + C+ GK ++A+ V +MK+ + + ++Y ++
Sbjct: 268 HKMILENI-------NPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSL 320
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ G+C + M + PDV Y +I GF + AM+ E+M
Sbjct: 321 MNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQI 380
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
P T++S++ L + G + ++ M DR NI ++ L + H DKA E
Sbjct: 381 FPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIE 440
Query: 249 IVELL----YKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ L + C ++ LCK G+L +A+K+ L N +N+D+ N +I G
Sbjct: 441 LLTKLKDHNIQPSVCTY-NILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGF 499
Query: 305 CEINRVLEAF 314
C+ V+ F
Sbjct: 500 CKKGFVIPQF 509
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 18/371 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + + T + LI+ G+ + VF N+ D+ + + LI+ LC +GD KA
Sbjct: 99 GIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKA 158
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D++ G Q SY+ + LC+ G+T+ A +LR+I + + D +
Sbjct: 159 LHFHDKVLA-------LGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVM 211
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C++ + ++ M+ + P V Y+ LI G + A+ L KM+
Sbjct: 212 YNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI 271
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---G 241
+ P T+ ++ ++G E+ V V+M+ ++++ NI L+ G+
Sbjct: 272 LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNI---VTYNSLMNGYCLVN 328
Query: 242 HRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+KA I + + G + ++ CK + EA KL D+ N
Sbjct: 329 EVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYN 388
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGL 358
++I GLC+ R+ A L E+ ++G + N L+ AL V++A + ++
Sbjct: 389 SLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKD- 447
Query: 359 ENLDRSVLSYS 369
N+ SV +Y+
Sbjct: 448 HNIQPSVCTYN 458
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+N+L++ +C +++A +F M V D SYSI+I C+ D+A KL
Sbjct: 312 PNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKL 371
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYM 126
F+E+ K+I P +Y + LC+ G+ A +++ ++ RG Q P ++Y
Sbjct: 372 FEEMHCKQIF-------PDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG-QPPNIITYN 423
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+++ C+ + ELL + + P V Y+ LI+G + + A + E +L +
Sbjct: 424 SLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVN 483
Query: 187 SYLPKTSTWHSILARLLEKGF 207
Y T+++++ +KGF
Sbjct: 484 GYNIDVYTYNTMIKGFCKKGF 504
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD +++ +I C +DEA+K+FE M Q+ D +Y+ LI LC+ G A
Sbjct: 344 GVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYA 403
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
KL E+ ++ G P +Y + LC++ KA +L ++ Q + +
Sbjct: 404 LKLIGEMHDR-------GQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCT 456
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQK 170
Y +I G C+ G ++ ++ +L + DV Y+ +I GF +K
Sbjct: 457 YNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 147/347 (42%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TFNTLI C G + EAL +++ D SY LI LC+ G+ A
Sbjct: 133 GYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTA 192
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
++ ++ K L K Y I LC+H A + Q I K+ + D ++
Sbjct: 193 LQMLRKIDGK---LVKIN----VVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVT 245
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I G C G E + L M+ ++ PD ++ L+D ++ A L M+
Sbjct: 246 FSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMM 305
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K +P T+ S++ +++ V + N + I D
Sbjct: 306 KEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVD 365
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + KG V ++ LCK G++ A +L+ N +I N +I
Sbjct: 366 EALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLI 425
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ + V +A L ++ ++G+ ++ N L+ L G+++ A
Sbjct: 426 DALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNA 472
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD TF+ LI+ C G L+EA +F M + D +++IL+ LC+ G+ A+
Sbjct: 240 SPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKN 299
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
+ +V+ K G P +Y + C + KA+ VL I + G + SY
Sbjct: 300 ML-------VVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYC 352
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ + L M + PD Y+ LIDG + + A E +++M +
Sbjct: 353 TMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDN 412
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
T++ ++ L + ++ + + D+ I+ ++ I L G A
Sbjct: 413 GQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNA 472
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
++ + L KG+ V +V LCK G EA LL
Sbjct: 473 QDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALL 511
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 158/360 (43%), Gaps = 23/360 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD TFN LI+ +C ++ A + + D+ +++ LI+ LC G +A
Sbjct: 98 GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D + L +F SY + LC+ G+TR A ++LR+I + + + +
Sbjct: 158 LHFHDHVLALGFHLDQF-------SYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVM 210
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C+ + YEL M+ + PDV + LI GF + A +M+
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMV 270
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ ++ L ++G + + V+M+ + N+ + ++ +
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVN 330
Query: 245 KAFEIVELLYKKG-------FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID-- 295
KA ++ + + G +C I CK + EA L LF+ + D
Sbjct: 331 KAKHVLNTISQMGAAPNAHSYCTMING----FCKIKMVDEA--LSLFNDMQFKGIAPDKV 384
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
N++I GLC+ R+ A+ L E+ + G + N L+ AL V++A + K+I
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD T+N+LI C +G + A ++ + M + A+ +Y+ LI LC+ D+A
Sbjct: 378 GIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQA 437
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L ++ ++ G QP ++ + LC+ G+ + A+ V + ++ +G + + +
Sbjct: 438 IALVKKIKDQ-------GIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWT 490
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G C+EG ++ LL M +PD Y+ LI KD+ A + L +M+
Sbjct: 491 YNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550
Query: 185 KSSYL 189
L
Sbjct: 551 ARGLL 555
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD TFN LI+ C G L A VF+++ + + ++ +Y+I++ LC+ G +D
Sbjct: 446 DQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFD 505
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+AE L ++ + I+ P A +Y+ + Q L + KAE++LR+++ RG
Sbjct: 506 EAEALLSKMDDNGII-------PDAVTYETLIQALFHKDENEKAEKLLREMIARG 553
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G + T+N LI + C ++D+A+ + + +K+ + D +++ILI LC+ G
Sbjct: 411 DNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLK 470
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ +F +L K G A +Y + LC+ G +AE +L ++ G D
Sbjct: 471 NAQDVFQDLLSK-------GYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDA 523
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I + E +LL M+ R L
Sbjct: 524 VTYETLIQALFHKDENEKAEKLLREMIARGLL 555
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 147/347 (42%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT TFNTLI C G + EAL +++ D SY LI LC+ G+ A
Sbjct: 133 GYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTA 192
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
++ ++ K L K Y I LC+H A + Q I K+ + D ++
Sbjct: 193 LQMLRKIDGK---LVKIN----VVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVT 245
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I G C G E + L M+ ++ PD ++ L+D ++ A L M+
Sbjct: 246 FSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMM 305
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K +P T+ S++ +++ V + N + I D
Sbjct: 306 KEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVD 365
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + + KG V ++ LCK G++ A +L+ N +I N +I
Sbjct: 366 EALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLI 425
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ + V +A L ++ ++G+ ++ N L+ L G+++ A
Sbjct: 426 DALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNA 472
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD TF+ LI+ C G L+EA +F M + D +++IL+ LC+ G+ A+
Sbjct: 240 SPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKN 299
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
+ +V+ K G P +Y + C + KA+ VL I + G + SY
Sbjct: 300 ML-------VVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYC 352
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ + L M + PD Y+ LIDG + + A E +++M +
Sbjct: 353 TMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDN 412
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
T++ ++ L + ++ + + D+ I+ ++ I L G A
Sbjct: 413 GQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNA 472
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
++ + L KG+ V +V LCK G EA LL
Sbjct: 473 QDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALL 511
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 158/360 (43%), Gaps = 23/360 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD TFN LI+ +C ++ A + + D+ +++ LI+ LC G +A
Sbjct: 98 GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D + L +F SY + LC+ G+TR A ++LR+I + + + +
Sbjct: 158 LHFHDHVLALGFHLDQF-------SYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVM 210
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C+ + YEL M+ + PDV + LI GF + A +M+
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMV 270
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ ++ L ++G + + V+M+ + N+ + ++ +
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVN 330
Query: 245 KAFEIVELLYKKG-------FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID-- 295
KA ++ + + G +C I CK + EA L LF+ + D
Sbjct: 331 KAKHVLNTISQMGAAPNAHSYCTMING----FCKIKMVDEA--LSLFNDMQFKGIAPDKV 384
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
N++I GLC+ R+ A+ L E+ + G + N L+ AL V++A + K+I
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD T+N+LI C +G + A ++ + M + A+ +Y+ LI LC+ D+A
Sbjct: 378 GIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQA 437
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L ++ ++ G QP ++ + LC+ G+ + A+ V + ++ +G + + +
Sbjct: 438 IALVKKIKDQ-------GIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWT 490
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G C+EG ++ LL M +PD Y+ LI KD+ A + L +M+
Sbjct: 491 YNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550
Query: 185 KSSYL 189
L
Sbjct: 551 ARGLL 555
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD TFN LI+ C G L A VF+++ + + ++ +Y+I++ LC+ G +D
Sbjct: 446 DQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFD 505
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+AE L ++ + I+ P A +Y+ + Q L + KAE++LR+++ RG
Sbjct: 506 EAEALLSKMDDNGII-------PDAVTYETLIQALFHKDENEKAEKLLREMIARG 553
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G + T+N LI + C ++D+A+ + + +K+ + D +++ILI LC+ G
Sbjct: 411 DNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLK 470
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ +F +L K G A +Y + LC+ G +AE +L ++ G D
Sbjct: 471 NAQDVFQDLLSK-------GYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDA 523
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I + E +LL M+ R L
Sbjct: 524 VTYETLIQALFHKDENEKAEKLLREMIARGLL 555
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
S + T++ LI C G L +A+ +F M + + D +++IL+ C+ G +A+
Sbjct: 242 SSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKN 301
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYM 126
+ ++ G +P +Y + C + A+ +L + RG T SY
Sbjct: 302 GLAMMMKQ-------GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYN 354
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
VI G C+ + +L M + P+V Y+ LIDG + + A+E ++ M
Sbjct: 355 IVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDR 414
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T+ SIL L + ++ + + + D+ IR N+ T I+ L G + A
Sbjct: 415 GQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 474
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
I E L KG+ + + ++Q C G EA LL
Sbjct: 475 RNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLL 513
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 146/358 (40%), Gaps = 33/358 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT T NT I C G + +AL + + D SY LI LC+ G+ A
Sbjct: 135 GYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAA 194
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLS 124
+L + K + Q Y I +C+ A + +++ +R + + ++
Sbjct: 195 LELLRRVDGKLV-------QLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G ++ L M + PDV ++ L+D F ++ + A L M+
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307
Query: 185 KSSYLPKTSTWHSI-----------LARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS 233
K P T++S+ +A+ + H TV NI N K
Sbjct: 308 KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVR--SYNIVINGFCKIKM 365
Query: 234 IEL---LFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHH 290
++ LF H + F V + ++ LCK G++ A +L+
Sbjct: 366 VDQAMKLFKEMHHKQIFPNV---------ITYNSLIDGLCKSGRISYALELIDLMHDRGQ 416
Query: 291 NVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
DI ++++ LC+ + V +A L +L ++G+ + L+ L G++E+A
Sbjct: 417 QPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 474
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 8/253 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N+L+ +C ++ A + M + VTA SY+I+I C+ D+A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
KLF E+ K+I P +Y + LC+ G+ A ++ + RG Q D ++
Sbjct: 370 MKLFKEMHHKQIF-------PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIIT 422
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ C+ + LLI + + P++ Y LIDG + + A E +L
Sbjct: 423 YSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLL 482
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y +T+ ++ G E+ + M D + + I LF D
Sbjct: 483 VKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEND 542
Query: 245 KAFEIVELLYKKG 257
KA +++ + +G
Sbjct: 543 KAEKLLREMITRG 555
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 152/375 (40%), Gaps = 36/375 (9%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG----DYD 63
+P F ++ S + + L +F+ M+ + + +++ILI CQ G +
Sbjct: 67 TPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFS 126
Query: 64 KAEKLFDELFEKEIV------------------------LCKFGSQPLAASYKPIFQYLC 99
K+ +E + + L G SY + LC
Sbjct: 127 VLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC 186
Query: 100 EHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVE 158
+ G+TR A +LR++ + Q D + Y T+I C++ + ++L M+ R ++
Sbjct: 187 KVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIV 246
Query: 159 IYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
Y LI GF K A+ KM + P T++ ++ ++G E+ MM
Sbjct: 247 TYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMM 306
Query: 219 LDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKL 275
+ + I+ +I ++ + A I+ + +G + V+ CK +
Sbjct: 307 MKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMV 366
Query: 276 PEARKLLLFSLKNHHNV--DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
+A K LF +H + ++ N++I GLC+ R+ A L + ++G ++ +
Sbjct: 367 DQAMK--LFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYS 424
Query: 334 DLVTALEARGKVEEA 348
++ AL V++A
Sbjct: 425 SILDALCKNHLVDKA 439
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+N+LI C +G + AL++ + M + D +YS ++ LC+ DKA L
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
+L ++ G +P +Y + LC+ G+ A + ++ +G + +Y
Sbjct: 443 LIKLKDQ-------GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTV 495
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C G ++ LL M +PD Y+ +I KD+ A + L +M+
Sbjct: 496 MIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555
Query: 188 YL 189
L
Sbjct: 556 LL 557
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+++++ + C +D+A+ + +K+ + + +Y+ILI LC+ G +
Sbjct: 413 DRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLE 472
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A +F++L K G +Y + Q C HG +A +L ++ D
Sbjct: 473 DARNIFEDLLVK-------GYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDA 525
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y +I + + +LL M+ R L
Sbjct: 526 ITYEIIICSLFDKDENDKAEKLLREMITRGLL 557
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 156/351 (44%), Gaps = 11/351 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T + LI+ C L+ A + + ++ + + LI+ LC G+ KA
Sbjct: 88 PDIFTLSILINCFCHLNQLNYAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYF 147
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
+++ K L + SY + LC+ G+T+ A +LR+I + D + Y T
Sbjct: 148 HNDVIAKGFYLNE-------VSYGTLINGLCKSGETKAALSLLRKIEGSLVKPDVVMYNT 200
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I C++ +GY+L M+ + PD Y+ LI GF + A+ L +M +
Sbjct: 201 IIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKN 260
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ ++ L + G ++ V +M+ + + NI + ++ F +KA
Sbjct: 261 VNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKAT 320
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ + ++G + ++ ++ CK + EA L + + N++I GL
Sbjct: 321 YVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGL 380
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
C++ R+ +A+ E+ ++G + + L+ L +V++A + +I
Sbjct: 381 CKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAITLLTKI 431
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 154/345 (44%), Gaps = 11/345 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD +NT+I S C + + ++ M ++ D+ +Y+ LI G +A L
Sbjct: 193 PDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGL 252
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
+ + K + P ++ + LC+ G+ +KA VL ++K+G + ++ +
Sbjct: 253 LNRMTLKNV-------NPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSS 305
Query: 129 IMGHCREGAYENGYELLI-WMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+M C N + + RR DV+ Y +I+GF + A+ ++M +
Sbjct: 306 LMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKN 365
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+P T T++S++ L + G ++ M DR NI + ++ L + DKA
Sbjct: 366 MVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAI 425
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ + +G + I +V LCK GKL +A+++ L N +++D + +I GL
Sbjct: 426 TLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTVMINGL 485
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
C+ EA L ++ + G + ++ AL + ++A
Sbjct: 486 CKEGFFDEALSLLSKMEDNGCTPDGVTYEIIIRALFENNRNDKAV 530
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 8/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+++L+ S +++A VF + V D SYS++I C+ D+A
Sbjct: 295 GVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEA 354
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF E+ K +V P +Y + LC+ G+ A + ++ RG + ++
Sbjct: 355 VNLFKEMHSKNMV-------PNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIIT 407
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ G C+ + LL + + D+ Y L+DG + K A E + +L
Sbjct: 408 YSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLL 467
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++Y + ++ L ++GF E+ + M D + I LF + D
Sbjct: 468 NNTYHLDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIIIRALFENNRND 527
Query: 245 KAFEIVELLYKKGF 258
KA +++ + +G
Sbjct: 528 KAVKLIREMIARGL 541
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 148/351 (42%), Gaps = 19/351 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+T T TLI C G + +AL ++ + SY LI LC+ G+ A
Sbjct: 120 GYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETKAA 179
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
L ++ E +V +P Y I LC+ + + I+K+ D ++
Sbjct: 180 LSLLRKI-EGSLV------KPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAIT 232
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G G + LL M ++ P+V + LID + + A L M+
Sbjct: 233 YNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMI 292
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG----H 240
K P +T+ S L++ F + + + R+ + L +S ++ +
Sbjct: 293 KQGVEPNIATYSS----LMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKN 348
Query: 241 GHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
D+A + + ++ K V ++ LCK G++ +A + +I
Sbjct: 349 KMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITY 408
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++++ GLC+ ++V +A L ++ +G+ ++ LV L GK+ +A
Sbjct: 409 SSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDA 459
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+T T+N+LI C G + +A + M + A+ +YS L+ LC+ DKA L
Sbjct: 368 PNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAITL 427
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++ + I L + +Y + LC++GK R A+ V + ++ D Y
Sbjct: 428 LTKIKNQGIQLDIY-------TYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTV 480
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+EG ++ LL M PD Y+ +I + ++ A++ + +M+
Sbjct: 481 MINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIIIRALFENNRNDKAVKLIREMIARG 540
Query: 188 YL 189
L
Sbjct: 541 LL 542
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 149/324 (45%), Gaps = 19/324 (5%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVT-ADSASYSILIRNLCQRGDYDKA 65
+ P+ C FN L+ HC G++D A +V + M+N + + + +YS L+ LC+ G +A
Sbjct: 233 YKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEA 292
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+LF+E+ K+ ++ P +Y + C GK +A V+ + G + +
Sbjct: 293 FELFEEMVSKDQIV------PDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFN 346
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G C+ G ++ +L M PD Y LI+ F + + A+E L +M
Sbjct: 347 YSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMK 406
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ T T++ IL L +G E+ + M+++ +Q + L+ S ++ ++
Sbjct: 407 ENDCQADTVTFNVILGGLCREGRFDEA----LDMIEKLPQQGVYLNKGSYRIVLNSLTQN 462
Query: 245 ----KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
KA +++ L+ +GF E++ LCK G +A L + D
Sbjct: 463 CELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSW 522
Query: 298 NAVILGLCEINRVLEAFGLCYELV 321
+I +C ++L F L ELV
Sbjct: 523 ELLIDLICRDRKLLYVFELLDELV 546
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 22/300 (7%)
Query: 49 YSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE 108
++IL++ C+RGD D A ++ E+ + S P +Y + LC +G+ ++A
Sbjct: 240 FNILVKYHCRRGDIDSAFEVVKEMRNSKY------SYPNVITYSTLMDGLCRNGRLKEAF 293
Query: 109 RVLRQIMKRG--TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
+ +++ + DPL+Y +I G CREG + ++ +M P+V Y L+DG
Sbjct: 294 ELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDG 353
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+ K A L +M S P T+ S++ G E+ + M + + + +
Sbjct: 354 LCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQAD 413
Query: 227 INLSTKSIELLFG----HGHRDKAFEIVELLYKKGFCVK---IEEVVQFLCKRGKLPEAR 279
T + ++ G G D+A +++E L ++G + V+ L + +L +A
Sbjct: 414 ----TVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKAN 469
Query: 280 KLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL---HQELTCLNDLV 336
KLL L N +++ LC+ +A ++LV+ G H L DL+
Sbjct: 470 KLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLI 529
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G PD T+ +LI+ G +DEA+++ MK AD+ ++++++ LC+ G +D+
Sbjct: 373 SGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDE 432
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
A + ++L ++ + L K SY+ + L ++ + RKA ++L ++ RG
Sbjct: 433 ALDMIEKLPQQGVYLNK-------GSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYA 485
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+ +++ C+EG + L ++ F P + ++ LID + K L E L+++
Sbjct: 486 TSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRKLLYVFELLDEL 545
Query: 184 LKSS 187
+ S+
Sbjct: 546 VTSN 549
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 163/376 (43%), Gaps = 15/376 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M GD F PD T+N LIH C G +DEAL++ MK+ + + +Y+ILI C
Sbjct: 195 MVGDHCF-PDRITYNVLIHGVCKIGVVDEALRLIRQMKDKGLFPNVFTYTILIDGFCNAK 253
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-- 118
D+A + D + E + + A+ + + + KA +L + + R
Sbjct: 254 RVDEAFGVLDMMKESRVCANE-------ATIRTLVHGVFRCVDPSKAFVLLSEFLDREED 306
Query: 119 -TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
L+ TV+ + + L R ++PD +++ ++ +++ + A
Sbjct: 307 FCSGKLACDTVLYCLANNSMAKEMVVFIRKALARGYVPDSSVFNVIMACLVKRAELREAC 366
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
E E K P T+ ++ L + E +++ M+ + N+ I+
Sbjct: 367 EIFEIFTKRGVKPGIGTYLTLAEALYKDEQRDEGDQISDQMVSDGLISNVVSYNMLIDCF 426
Query: 238 FGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
DKA E+ + +GF V ++ CK G + +AR+LL L+N DI
Sbjct: 427 CKVSLMDKASEVFSEMQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDI 486
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKR 354
+ +I GLC + R EAF E+VE G++ N L+ +L + G+ + + +R
Sbjct: 487 FTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRR 546
Query: 355 IPGLENLDRSVLSYSS 370
+ E + + SY++
Sbjct: 547 MQE-EGISPDIYSYNA 561
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 120/281 (42%), Gaps = 11/281 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PD+ FN ++ L EA ++FE V +Y L L + D+
Sbjct: 341 GYVPDSSVFNVIMACLVKRAELREACEIFEIFTKRGVKPGIGTYLTLAEALYKDEQRDEG 400
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+++ D++ ++ SY + C+ KA V ++ RG T + ++
Sbjct: 401 DQISDQMVSDGLI-------SNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVT 453
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T+I GHC++GA ELL +L PD+ + C+IDG + + A E +M+
Sbjct: 454 FNTLINGHCKDGAIIKARELLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEMV 513
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P ++ ++ L G S ++ M + I +I I++ +
Sbjct: 514 EWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNKVE 573
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL 282
KA ++ + + K GF + L + G+L EA+K+
Sbjct: 574 KAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMF 614
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 157/354 (44%), Gaps = 19/354 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ T TLI C G + +AL+ + + + SY LI LC+ G A
Sbjct: 137 GYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAA 196
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+L + K + QP Y I +C+ +A + +++ +G + D ++
Sbjct: 197 LQLLRRVDGKLV-------QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G ++ +L M+ + P+V ++ L+DGF ++ + A L M+
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T++S++ R +++ + + R + NI+ + I D
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369
Query: 245 KAFEIVELLYKKGFCVK-IEEVVQF------LCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
+A L+K+ C I +VV + LCK GK+ A KL+ D
Sbjct: 370 EAMN----LFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITY 425
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
N+++ LC+ ++V +A L ++ ++G+ ++ LV L G++E+A +
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIV 479
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ +++ +IH C +DEA+ +F+ M + D +Y+ LI LC+ G A
Sbjct: 347 GVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYA 406
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
KL DE+ ++ G +Y I LC++ + KA +L ++ G Q D +
Sbjct: 407 LKLVDEMHDR-------GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICT 459
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G C+ G E+ + +L + ++ DV IY +I GF +++ L KM
Sbjct: 460 YTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKME 519
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
++ +P T+ I+ L +K ++ ++ M+ R +
Sbjct: 520 ENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 11/281 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD T+N LI C G + +A +F M + + +++IL+ C+ +A
Sbjct: 242 GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEA 301
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+ + + ++ G +P +Y + C + KA+ + I +RG + S
Sbjct: 302 KNVLAMMMKQ-------GIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHS 354
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ + L M + +PDV Y+ LIDG + K A++ +++M
Sbjct: 355 YSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 414
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
T++SIL L + ++ + M D I+ +I T ++ L +G +
Sbjct: 415 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLE 474
Query: 245 KAFEIVELLYKKGFCVKIE---EVVQFLCKRGKLPEARKLL 282
A + E L KG+ + + ++Q C G E+ LL
Sbjct: 475 DARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLL 515
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD CT+ TL+ C G L++A VFE++ D Y+ +I+ C G +D
Sbjct: 450 DEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFD 509
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
++ L ++ E G P A +Y+ I L + + KAE++LR+++ RG
Sbjct: 510 ESLDLLSKMEEN-------GCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 153/351 (43%), Gaps = 19/351 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P T TFNTLI+ C G L EAL +++ D SY LI LC+ G+ A
Sbjct: 124 GYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAA 183
Query: 66 ----EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQ 120
+K+ +L ++V+ Y I LC+ A ++ + I KR +
Sbjct: 184 LQMLKKIEGKLVNTDVVM-----------YNIIINSLCKDKAVSDAYQLYSEMITKRISP 232
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D +++ ++I+G C G + + L M+ ++ PDV + L+D + A L
Sbjct: 233 DVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNML 292
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
M+K +P T+ S++ +++ V M + + + I L
Sbjct: 293 AVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKI 352
Query: 241 GHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
D+A + + + KG V ++ LCK G++ A +L+ N DI
Sbjct: 353 KMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTY 412
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N++I LC+ + + +A L ++ ++G+ + N L+ L G+++ A
Sbjct: 413 NSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNA 463
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PDT T+N+LI C G + A ++ + M N + AD +Y+ LI LC+ DKA
Sbjct: 369 GIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKA 428
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L ++ ++ G QP +Y + LC+ G+ + A+ V + ++ +G + + +
Sbjct: 429 IALVKKIKDQ-------GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWT 481
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+EG + LL M +PD Y+ +I +KD+ A + L +M+
Sbjct: 482 YNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMI 541
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 154/345 (44%), Gaps = 11/345 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+ D +N +I+S C + +A +++ M +++ D +++ LI C G +A
Sbjct: 196 NTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFG 255
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYM 126
LF E+ K I P ++ + LC+ G +A+ +L +MK+G D ++Y
Sbjct: 256 LFHEMVLKNI-------NPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYS 308
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+++ G+C + M R P Y+ +I+G + A+ ++M
Sbjct: 309 SLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCK 368
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T T++S++ L + G + ++ M + I +I I++L + H DKA
Sbjct: 369 GIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKA 428
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+V+ + +G + ++ LCK G+L A+ + L ++V+ N +I G
Sbjct: 429 IALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMING 488
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ EA L ++ G+ + ++ AL + + E+A
Sbjct: 489 LCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKA 533
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 11/280 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SPD TFN+LI C G L EA +F M + D ++SIL+ LC+ G+ +A+
Sbjct: 230 ISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAK 289
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+ V+ K G P +Y + C + KA+ V + + G SY
Sbjct: 290 NMLA-------VMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSY 342
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G + + L M + PD Y+ LIDG + + A + +++M
Sbjct: 343 NIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHN 402
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+ T++S++ L + ++ + + D+ I+ ++ I+ L G
Sbjct: 403 NGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKN 462
Query: 246 AFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
A ++ + L KG+ V ++ LCK G EA LL
Sbjct: 463 AQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLL 502
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 166/390 (42%), Gaps = 50/390 (12%)
Query: 8 SPDTCTFNTLIHSHCSAGN--LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
+P FN ++ S A N A+ + ++ +T +++IL+ C G+ A
Sbjct: 54 TPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFA 113
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+F ++ K G P ++ + +C +GK ++A ++ G D +S
Sbjct: 114 FSIFAKIL-------KLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVS 166
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLL-AMETLEKM 183
Y T+I G C+ G ++L + + DV +Y+ +I+ L KDK + A + +M
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS-LCKDKAVSDAYQLYSEM 225
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ P T++S++ G E+ + M+ +NI ++ + ++ L G+
Sbjct: 226 ITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNI 285
Query: 244 DKAFEIVELLYKK--------------GFCV-----KIEEVVQFLCKRGKLPEAR--KLL 282
+A ++ ++ K+ G+C+ K + V + + G P A ++
Sbjct: 286 TRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIM 345
Query: 283 LFSLKNHHNVD------IDLC-----------NAVILGLCEINRVLEAFGLCYELVEKGL 325
+ L VD ++C N++I GLC++ R+ A+ L E+ G+
Sbjct: 346 INGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGI 405
Query: 326 HQELTCLNDLVTALEARGKVEEAAFISKRI 355
++ N L+ L +++A + K+I
Sbjct: 406 PADILTYNSLIDVLCKNHHIDKAIALVKKI 435
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P T+N LI C G L A VF+++ + ++ +Y+I+I LC+ G ++
Sbjct: 437 DQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFN 496
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+AE L ++ I+ P A +Y+ I + L + KAE++LR+++ RG
Sbjct: 497 EAEVLLSKMENNGII-------PDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G D T+N+LI C ++D+A+ + + +K+ + +Y+ILI LC+ G
Sbjct: 402 NNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLK 461
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ +F +L K G A +Y + LC+ G +AE +L ++ G D
Sbjct: 462 NAQDVFQDLLIK-------GYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDA 514
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I R+ E +LL M+ R L
Sbjct: 515 VTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+S + T+N +I+ C G +EA + M+N + D+ +Y +IR L ++ + +KA
Sbjct: 474 GYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKA 533
Query: 66 EKLFDELFEKEIVLCK 81
EKL E+ + ++LCK
Sbjct: 534 EKLLREMIIRGLLLCK 549
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 164/410 (40%), Gaps = 69/410 (16%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+ D NTL+ + G EAL + M++ V + +IL + L + GDY
Sbjct: 213 YESDFSVLNTLMRGFLNVGMSLEALDILNRMRDVGVRPSVTAMTILFKLLFRVGDYGTIW 272
Query: 67 KLFDELFEK---------EIVLC-------------------KFGSQPLAASYKPIFQYL 98
LF ++ K ++C KFG +P +Y I
Sbjct: 273 SLFKDMIRKGPAPSSITFNTMICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVIINGC 332
Query: 99 CEHGKTRKAERVLRQIMKRGTQDPLS-YMTVIMGHCREGAYENGYELLIWMLRRDFLPDV 157
C G T A LR +MKRG + +S + T++ CREG +L +L +P+
Sbjct: 333 CVGGNTSVAVGWLRLMMKRGCEPSVSTFNTILHSLCREGNVVEARKLFDRVLALGVVPNT 392
Query: 158 EIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP-----------------KTSTWHSILA 200
IY+ ++DG++ K + + L K ++ +P + W +L
Sbjct: 393 AIYNTMMDGYV-KARDIGRASLLYKEMRIKGVPPDCVTFNIFVGGHYKYGRQEDWTKLLT 451
Query: 201 RLLEKGFPHE-------------SARV--TVMMLDRNIRQNINLSTKSIELLFG----HG 241
L E GF + + R+ + +L ++ + S + L G
Sbjct: 452 DLTEMGFFQDCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLTFSVAAFNSLIAAYSREG 511
Query: 242 HRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
DKAFEI ++ K GF ++ LC++GKL EAR LL + +
Sbjct: 512 LEDKAFEIYHIMVKCGFTPSASTCNSLLMGLCRKGKLQEARALLHRMSEKGFLIKKVAYT 571
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ G ++N + A + E+ E+G++ ++ + L+ L G V+EA
Sbjct: 572 LLFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEA 621
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 152/363 (41%), Gaps = 21/363 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P TFNT++HS C GN+ EA K+F+ + V ++A Y+ ++ + D +A
Sbjct: 352 GCEPSVSTFNTILHSLCREGNVVEARKLFDRVLALGVVPNTAIYNTMMDGYVKARDIGRA 411
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L+ E+ K G P ++ ++G+ ++L + + G QD
Sbjct: 412 SLLYKEMRIK-------GVPPDCVTFNIFVGGHYKYGRQEDWTKLLTDLTEMGFFQDCSL 464
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y + HC G + +LL L V ++ LI + ++ A E M+
Sbjct: 465 YDMTVSWHCWAGRLDQAIKLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKAFEIYHIMV 524
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K + P ST +S+L L KG E AR +L R + + + LLF +
Sbjct: 525 KCGFTPSASTCNSLLMGLCRKGKLQE-ARA---LLHRMSEKGFLIKKVAYTLLFDGYFKM 580
Query: 245 KAFEIVELLYK----KGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
+ ++K +G V ++ L K G + EA ++ L L +
Sbjct: 581 NDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAY 640
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA--AFISKRI 355
N++I G C + R+ +A + E+ +GL + N ++ +G ++ A AF+
Sbjct: 641 NSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHR 700
Query: 356 PGL 358
GL
Sbjct: 701 IGL 703
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 156/382 (40%), Gaps = 17/382 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D ++ + HC AG LD+A+K+ ++ +T A+++ LI + G DKA
Sbjct: 457 GFFQDCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKA 516
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
FE ++ K G P A++ + LC GK ++A +L ++ ++G ++
Sbjct: 517 -------FEIYHIMVKCGFTPSASTCNSLLMGLCRKGKLQEARALLHRMSEKGFLIKKVA 569
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y + G+ + + + M R PDV + LIDG + A E +ML
Sbjct: 570 YTLLFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEML 629
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++P ++S++ G ++ +V M R + + I+ G+
Sbjct: 630 SIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMK 689
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A + +++ G I +V CK + A ++ DI N +
Sbjct: 690 SAIDAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNIRM 749
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEA----RGKVEEAAFISKR-IP 356
G C + ++ A + ELV G+ N ++ + + R + A I IP
Sbjct: 750 HGYCSVRKMNRAIAILDELVSAGIVPNTVTYNTVMGGICSDILDRAMIVTAKLIKMGFIP 809
Query: 357 GLENLDRSVLSYSSKKSRPNKA 378
+ + +LS+ K+ P +A
Sbjct: 810 NVITTN-ILLSHFCKQGMPERA 830
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 122/286 (42%), Gaps = 24/286 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + L + ++D A +++ MK + D ++S LI L + G+ D+A
Sbjct: 562 GFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEA 621
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
++F E+ G P +Y + C G+ +A +V +++ RG D +
Sbjct: 622 YEVFLEMLS-------IGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFT 674
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ +I CR+G ++ + + M R +PD+ ++ L+ G+ + + A + + KM
Sbjct: 675 FNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRADDIVNKMY 734
Query: 185 KSSYLPKTSTWHSIL-----ARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
P +T++ + R + + V+ ++ + N + ++L
Sbjct: 735 PYGLYPDITTYNIRMHGYCSVRKMNRAIAILDELVSAGIVPNTVTYNTVMGGICSDIL-- 792
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL 282
D+A + L K GF + ++ CK+G +PE R LL
Sbjct: 793 ----DRAMIVTAKLIKMGFIPNVITTNILLSHFCKQG-MPE-RALL 832
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 13/276 (4%)
Query: 83 GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENG 141
G +P + +F+ L G + + ++++G +++ T+I G CR G G
Sbjct: 247 GVRPSVTAMTILFKLLFRVGDYGTIWSLFKDMIRKGPAPSSITFNTMICGFCRRGKVVIG 306
Query: 142 YELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILAR 201
L M + PDV Y+ +I+G +A+ L M+K P ST+++IL
Sbjct: 307 ESLFHLMGKFGCEPDVFTYNVIINGCCVGGNTSVAVGWLRLMMKRGCEPSVSTFNTILHS 366
Query: 202 LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK----KG 257
L +G E+ + + DR + + +T + + + LLYK KG
Sbjct: 367 LCREGNVVEARK----LFDRVLALGVVPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKG 422
Query: 258 F---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAF 314
CV V K G+ + KLL + D L + + C R+ +A
Sbjct: 423 VPPDCVTFNIFVGGHYKYGRQEDWTKLLTDLTEMGFFQDCSLYDMTVSWHCWAGRLDQAI 482
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAF 350
L + + GL + N L+ A G +E+ AF
Sbjct: 483 KLLKDSLAMGLTFSVAAFNSLIAAYSREG-LEDKAF 517
>Medtr7g073260.1 | PPR containing plant-like protein | HC |
chr7:27362299-27360390 | 20130731
Length = 583
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 163/359 (45%), Gaps = 30/359 (8%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD+CT++ +I HCS L+EA +V + DSA+ ++LI +LC+RG KA ++
Sbjct: 144 PDSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLINSLCKRGKVKKAMEV 203
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT--QDPLSYM 126
F+ L K + K G Q +Y + + L G+ +A +L MK G D SY
Sbjct: 204 FEFLERKGL---KLGVQ----AYNCLLRGLAYVGRVDEAVEILMD-MKTGNIGVDVYSYS 255
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
V+ G C+ G + EL + PDV ++ LI+G+ ++ + + + L+ M +
Sbjct: 256 AVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVLKMMKEH 315
Query: 187 SYLPKTSTWHSILARLLEK-------GFPHESAR----VTVMMLDRNIRQNINLSTKSIE 235
+ + ++L LL+ G E R V M+ +R+ LS +
Sbjct: 316 GCVADLINYKTVLHGLLKWNETVEAFGVYKEMVRIGFEVDSRMMGTLVRRLCKLSWREKG 375
Query: 236 LLFGHGHRDKAFEIVELLYKKGFCV---KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV 292
LL + A E+ E + ++G V +E +V+ L + K EA L ++ +++
Sbjct: 376 LL------EDACEVFEKMKERGLVVDKRTVEVMVEALFRGEKFDEALVNLNDMVRWGYSL 429
Query: 293 DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
+ VI GLC RV EA L G + LV L A G+V A+F+
Sbjct: 430 EGIAFEEVIEGLCGQGRVDEAVSTLLLLQANGGFLDRVSFGVLVNELNAHGRVFCASFL 488
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ GF PD+ T LI+S C G + +A++VFE ++ + +Y+ L+R L G D
Sbjct: 174 ENGFEPDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLAYVGRVD 233
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
+A ++ ++ I + + SY + LC+ G++ +A + + + G + D
Sbjct: 234 EAVEILMDMKTGNIGVDVY-------SYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDV 286
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+++ +I G+ REG G +L M + D+ Y ++ G L+ ++ + A ++
Sbjct: 287 VTFNALIEGYSREGREMEGVGVLKMMKEHGCVADLINYKTVLHGLLKWNETVEAFGVYKE 346
Query: 183 MLKSSYLPKTSTWHSILARLL-----EKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
M++ + + +++ RL EKG ++ V M +R + + +E L
Sbjct: 347 MVRIGFEVDSRMMGTLVRRLCKLSWREKGLLEDACEVFEKMKERGLVVDKRTVEVMVEAL 406
Query: 238 FGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVD 293
F D+A + + + G+ + EEV++ LC +G++ EA LL N +D
Sbjct: 407 FRGEKFDEALVNLNDMVRWGYSLEGIAFEEVIEGLCGQGRVDEAVSTLLLLQANGGFLD 465
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 198 ILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG 257
+L +LE GF +SA +TV+ I L G KA E+ E L +KG
Sbjct: 168 VLFTVLENGFEPDSATITVL----------------INSLCKRGKVKKAMEVFEFLERKG 211
Query: 258 FCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAF 314
+ ++ +++ L G++ EA ++L+ + VD+ +AV+ GLC++ R EA
Sbjct: 212 LKLGVQAYNCLLRGLAYVGRVDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAM 271
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
L E V GL ++ N L+ G+ E + K
Sbjct: 272 ELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVLK 310
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 159/363 (43%), Gaps = 28/363 (7%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
+ G GFSP T N ++ S +D F+ M +V+ + A+++IL+ LC+RG
Sbjct: 134 LMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERG 193
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
+ A L ++ E G P A +Y + + C+ G+ + A ++ + +G
Sbjct: 194 KFKSAGVLLRKMDET-------GHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIA 246
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D +Y +I CR+ GY +L M + P+ Y+ LI+G +++ K +A +
Sbjct: 247 ADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKV 306
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
E+M + LP + T+++++ G E+ R+ +M+ +R N + +
Sbjct: 307 FEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISK 366
Query: 240 HGHRDKAFEIVELLYKKGFCV---KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
H ++E + G V ++ LCK G L EA +LL LK + DI
Sbjct: 367 HAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVT 426
Query: 297 CNAVILGLCEI-------NRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+ ++ G + NRVL + L Y + G +L AL A + ++
Sbjct: 427 FSVLVNGFLKAGKTGLVPNRVLHS-TLIYNYCKMG---------NLKEALNAYAVMNQSG 476
Query: 350 FIS 352
+S
Sbjct: 477 HVS 479
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G++P F TLI C GN+ A+++ + MK V++ + S +IR L + D
Sbjct: 860 ENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTD 919
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR--GTQD 121
+A ++ + E +I+ P A++ + C+ G KA LR +M++ D
Sbjct: 920 EATRILGIMLEMQII-------PTVATFTTLMHTYCKEGNVAKALE-LRSVMEQCHVKLD 971
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y +I G C +G + ++L M +RD P+ IY LID FL ++ E L
Sbjct: 972 VAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLL 1031
Query: 182 KMLKS 186
+ L++
Sbjct: 1032 RDLRT 1036
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 157/427 (36%), Gaps = 94/427 (22%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G G P+ +TLI+++C GNL EAL + M +D + S+L+ + C+ G
Sbjct: 438 GKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRL 497
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-------- 114
++AE D + + G P + ++ I G KA V ++
Sbjct: 498 EEAEYFVDH-------MSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPS 550
Query: 115 -----------------------MKRGTQDPLS-----YMTVIMGHCREGAYENGYELLI 146
M R + P + Y T++ R G N LL
Sbjct: 551 QFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLD 610
Query: 147 WMLRRDFLPDVEIYDCLIDGFLQKDKP----LLAMETLEKMLKSSYLPKTSTWHSILARL 202
M+ +F+PD Y LI G +K K LL+ +EK L S P + + S++ L
Sbjct: 611 EMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLS---PNPAMYTSLVDGL 667
Query: 203 LEKGFPHESARVTV-----------------MMLDRNIRQN------------------I 227
L++G H A + + ++LDR R+
Sbjct: 668 LKEG--HSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCF 725
Query: 228 NLSTKSIELLFGHGHRDKAFEIVEL---LYKKGFC---VKIEEVVQFLCKRGKLPEARKL 281
NL+T +I LL G+ R +L + GF + ++ CK G L A K
Sbjct: 726 NLATYNI-LLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKF 784
Query: 282 LLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEA 341
L VD N ++ LCE N + AF L +L G+ + N L
Sbjct: 785 LRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVR 844
Query: 342 RGKVEEA 348
+EA
Sbjct: 845 TCSFDEA 851
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 142/346 (41%), Gaps = 18/346 (5%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
+NT++ +GNL A+ + + M DS +Y+ LI LC++G A L
Sbjct: 589 YNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAI 648
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGH 132
EK ++ P A Y + L + G ++ A + ++ G Q D +++ ++ +
Sbjct: 649 EKGLL------SPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRY 702
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
R+G ++L M R ++ Y+ L+ G+ ++ + +M+ + P
Sbjct: 703 SRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDR 762
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG----HGHRDKAFE 248
TWHS++ + G S V V L + + + ++ +L AF+
Sbjct: 763 LTWHSLILGYCKSG----SLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFD 818
Query: 249 IVELLYKKGFCVKIE---EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
+V+ L G ++ + + EAR +L L+N + +I G+C
Sbjct: 819 LVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMC 878
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
+ V A L E+ G+ + ++ ++ L K +EA I
Sbjct: 879 RMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRI 924
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 124/301 (41%), Gaps = 19/301 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF+PD T+++LI +C +G+LD A+K + D + ++L+ LC+R + A
Sbjct: 757 GFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMA 816
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
L + L G P +Y +F +A +L +++ G
Sbjct: 817 FDLVKQ-------LNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQ 869
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ T+I G CR G + EL M +I G + K A L ML
Sbjct: 870 FTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIML 929
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ +P +T+ +++ ++G ++ + +M +++ ++ I L G
Sbjct: 930 EMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQ 989
Query: 245 KAFEIVELLYKKGF----CVKIEEVVQFLCKRGKLPEARKLL-------LFSLKNHHNVD 293
AF++ E + ++ + I + FLC + E+ KLL L SL H ++
Sbjct: 990 AAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRELMSLDLHGGIE 1049
Query: 294 I 294
I
Sbjct: 1050 I 1050
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 131/322 (40%), Gaps = 12/322 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD FN L+ + G + + + M++ + + A+Y+IL+ +R +
Sbjct: 687 GVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARC 746
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
KL++E+ G P ++ + C+ G A + LR+I G + D +
Sbjct: 747 SKLYNEMIIH-------GFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFT 799
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ C + ++L+ + P+V+ Y+ L +GF++ A L +L
Sbjct: 800 LNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALL 859
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++ Y P + +++ + G + + M + + I L D
Sbjct: 860 ENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTD 919
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A I+ ++ + + + CK G + +A +L + H +D+ N +I
Sbjct: 920 EATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLI 979
Query: 302 LGLCEINRVLEAFGLCYELVEK 323
GLC + AF L YE +E+
Sbjct: 980 SGLCADGDIQAAFKL-YEEMEQ 1000
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 153/349 (43%), Gaps = 14/349 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P + N L+ S + L ++ +VF+ M V D +Y+ I C+ G D+A
Sbjct: 205 GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEA 264
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
LF ++ E G P +Y + LC+ G+ +A + + M +P +
Sbjct: 265 VGLFLKMGEG-------GVLPNVVTYNNLIDGLCKSGRLEEA-LMFKGRMVENKVNPSLV 316
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++ G + ++ +L+ M + F P+ +++ LIDG+ +K A+ + M
Sbjct: 317 TYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDM 376
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
P T +++L ++ +V +L + N + + + LL
Sbjct: 377 TLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKF 436
Query: 244 DKAFEIVELLYKKGFCVK---IEEVVQFLCKRGKLPEARKLLL-FSLKNHHNVDIDLCNA 299
D A +IV+ L + V + +V LCK GK EA L + K + NA
Sbjct: 437 DSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNA 496
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ GLCE + E F +C E+VE+GL + N L+ GK+EEA
Sbjct: 497 LLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEA 545
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 178/408 (43%), Gaps = 48/408 (11%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+GG P+ T+N LI C +G L+EAL M +V +Y IL+ L + +
Sbjct: 272 GEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKF 331
Query: 63 DKAEKLFDELFEKEIVLCKF----------------------------GSQPLAASYKPI 94
D+A + E++ K +F G +P A ++ +
Sbjct: 332 DEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTL 391
Query: 95 FQYLCEHGKTRKAERVLRQIMKR---GTQDPLSYMTVIMGHCREGAYENGYELLIWMLRR 151
Q C + +AE+VL ++ +D SY+ ++ C+ +++ +++ +L R
Sbjct: 392 LQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLL--CKSSKFDSALKIVKALLLR 449
Query: 152 DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML-KSSYLPKTSTWHSILARLLEKGFPHE 210
+ + + L+ G + K L A++ ++ K T+T +++L L E+G E
Sbjct: 450 NIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEE 509
Query: 211 SARVTVMMLDRN-IRQNINLSTKSIELLFG---HGHRDKAFEIVELLYKKGF---CVKIE 263
V M++R + I+ +T L+FG G ++AF++ E + K+GF
Sbjct: 510 VFPVCKEMVERGLVLDGISYNT----LIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYN 565
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL-GLCEINRVLEAFGLCYELVE 322
+++ L +GK+ + + +L K+H V A++L G C +R+ A L +LV
Sbjct: 566 FLMKGLADKGKMDDVGR-VLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVY 624
Query: 323 KGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
+ N L+ A G E AF + N+ ++ +YSS
Sbjct: 625 NKVELSYVVYNILIAAHSKAGNFTE-AFKLRDAMRSSNIHPTIFTYSS 671
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 163/385 (42%), Gaps = 53/385 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GFSP+ FN LI + GN+D+AL+V ++M + ++ +++ L++ C+ ++A
Sbjct: 345 GFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQA 404
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
E++ + L + + A SY + LC+ K A ++++ ++ R + S
Sbjct: 405 EQVLEYLLSNVLSV-----NEDACSY--VLHLLCKSSKFDSALKIVKALLLRNIKVNDSL 457
Query: 126 MTVIM-------------------------------------GHCREGAYENGYELLIWM 148
+T+++ G C G E + + M
Sbjct: 458 LTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEM 517
Query: 149 LRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP 208
+ R + D Y+ LI G + K A + EKM+K + P T T++ ++ L +KG
Sbjct: 518 VERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKM 577
Query: 209 HESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV-ELLYKKGFCVKIEEVVQ 267
+ RV D + NI +E D A + +L+Y K V++ VV
Sbjct: 578 DDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNK---VELSYVVY 634
Query: 268 FL-----CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVE 322
+ K G EA KL ++ + I +++I G+C + V EA G+ E+
Sbjct: 635 NILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRN 694
Query: 323 KGLHQELTCLNDLVTALEARGKVEE 347
+GL + C L+ G++++
Sbjct: 695 EGLMPNVFCYTALIGGYCKLGQMDQ 719
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 15/315 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + +T T N L++ C GN++E V + M + D SY+ LI C+ G ++A
Sbjct: 486 GLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEA 545
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
KL +++ ++ G +P +Y + + L + GK RVL + G + +
Sbjct: 546 FKLKEKMMKQ-------GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYT 598
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G+C +N L ++ +Y+ LI + A + + M
Sbjct: 599 YALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMR 658
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S+ P T+ SI+ + E+ + M + + N+ T I G D
Sbjct: 659 SSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMD 718
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFL-----CKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
+ I++ + C++ ++ + CK G EA KLL + N + D
Sbjct: 719 QIESILQEMTSN--CIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTV 776
Query: 300 VILGLCEINRVLEAF 314
+ G C+ N + E
Sbjct: 777 LQKGYCKENELEETL 791
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 17/246 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+ ++ +C+A +D A+ +F + +V Y+ILI + G++
Sbjct: 589 DHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFT 648
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A KL D + I P +Y I +C + +A+ + ++ G +
Sbjct: 649 EAFKLRDAMRSSNI-------HPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNV 701
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y +I G+C+ G + +L M P+ Y +IDG+ + A + L +
Sbjct: 702 FCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNE 761
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR-QNINLSTKSIELLFGHG 241
M+ + P T T+ +L+KG+ E+ + D + + I +T +L H
Sbjct: 762 MIANGISPDTVTY-----TVLQKGYCKENELEETLQGDTAVPLEEITYTTLVDKL---HP 813
Query: 242 HRDKAF 247
H D A
Sbjct: 814 HSDAAL 819
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 155/354 (43%), Gaps = 11/354 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T + LI+S C L+ A + + ++ + + LI LC G KA
Sbjct: 84 GIQPNIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKA 143
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D + K G SY + LC+ G+T+ A ++L +I + D +
Sbjct: 144 LYFHDHVIAK-------GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGLLVKPDVVM 196
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C++ +GY+L M+ P+V Y+ LI GF + A+ L +M
Sbjct: 197 YNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMS 256
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ +++ L ++G ++ V +M+ + + +I + ++ F +
Sbjct: 257 MKNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVN 316
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KA + L +G + ++ LCK + EA L ++ D N++I
Sbjct: 317 KAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLI 376
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
GLC+ R+ + + L E+ + G + N L+ AL +V++A + K+I
Sbjct: 377 DGLCKSGRISDVWDLLVEMHDIGQPANVITYNSLLDALCKNHQVDKAIALLKKI 430
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 158/383 (41%), Gaps = 46/383 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + ++ LI+ C +G AL++ E +K V D Y+ +I LC+
Sbjct: 154 GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDG 213
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLS 124
L+ E+ +I P +Y + G+ ++A +L Q+ MK + D L+
Sbjct: 214 YDLYSEMIVNKI-------HPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLT 266
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF-----LQKDKPLL---- 175
+ T++ G C++G + +L M+++ PD+ Y L+DG+ + K K L
Sbjct: 267 FTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLP 326
Query: 176 --------------------------AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
A ++M S+ P T +++S++ L + G
Sbjct: 327 LRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRIS 386
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VV 266
+ + V M D N+ ++ L + DKA +++ + +G + +V
Sbjct: 387 DVWDLLVEMHDIGQPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILV 446
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
LCK G+L +A+++ L + +++ + N ++ C+ EA L ++ + G
Sbjct: 447 DGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCT 506
Query: 327 QELTCLNDLVTALEARGKVEEAA 349
L+ AL K ++A
Sbjct: 507 PNAITYQTLICALFENNKNDKAV 529
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 106/219 (48%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ ++N +I+ C ++EA +F+ M + +T D+ SY+ LI LC+ G
Sbjct: 329 GVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDV 388
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
L E+ + G +Y + LC++ + KA +L++I +G Q + +
Sbjct: 389 WDLLVEMHD-------IGQPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYT 441
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G C+ G E+ E+ +L + + +V +Y+ +++ F ++ A+ L KM
Sbjct: 442 YTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKME 501
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+ P T+ +++ L E ++ ++ M+ R +
Sbjct: 502 DNGCTPNAITYQTLICALFENNKNDKAVKLLREMIVRGL 540
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 11/321 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+NTLI+ G + EA+ + M ++ D +++ L+ LC++G+ KA +
Sbjct: 227 PNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHV 286
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
+ ++ + +P +Y + + KA+ + + RG T + SY
Sbjct: 287 LAVMIKQRV-------EPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNI 339
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ L M + PD Y+ LIDG + + + L +M
Sbjct: 340 MINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIG 399
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
T++S+L L + ++ + + D+ I+ N+ T ++ L +G + A
Sbjct: 400 QPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQ 459
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
EI L KG+ + + +V CK G EA LL N + +I L
Sbjct: 460 EIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQTLICAL 519
Query: 305 CEINRVLEAFGLCYELVEKGL 325
E N+ +A L E++ +GL
Sbjct: 520 FENNKNDKAVKLLREMIVRGL 540
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G + T+N+L+ + C +D+A+ + + +K+ + + +Y+IL+ LC+ G +
Sbjct: 397 DIGQPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLE 456
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAAS-YKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
A++++ +L K PL S Y + C+ G +A +L ++ G T +
Sbjct: 457 DAQEIYHDLLTK--------GYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPN 508
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I + +LL M+ R L
Sbjct: 509 AITYQTLICALFENNKNDKAVKLLREMIVRGLL 541
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 160/354 (45%), Gaps = 17/354 (4%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G GF P+ +N LI++ C +LD+A +++NM + + + +YSILI + C+RG
Sbjct: 350 GRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGML 409
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
D AE F + E G + Y + C+ G AE + +++ G +
Sbjct: 410 DVAESYFGRMIED-------GIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPT 462
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++ T+I G+C++ E ++L M ++ P V + LI G ++ A + +
Sbjct: 463 ATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFD 522
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M++ P T++ ++ + ++ + ML + + I L G
Sbjct: 523 EMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTG 582
Query: 242 HRDKAFEIVELLYKKGFCVKIEE-----VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
A + ++ L+KK +K+ E ++ C +G+L EA ++ N+D+ +
Sbjct: 583 RVSAAKDFIDDLHKKN--LKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDL-V 639
Query: 297 CNAVIL-GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
C+AV++ G + + FGL ++ ++GL + ++ A G +++
Sbjct: 640 CHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 139/330 (42%), Gaps = 11/330 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P + L+ GN+D A + + F + Y+ LI LC+ D DKA
Sbjct: 318 GFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKA 377
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
E L+ + + L +Y + C+ G AE ++++ G ++ +
Sbjct: 378 ELLYKNMHSMNLPLND-------VTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP 430
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I GHC+ G L M+ P + LI G+ + + A + +M
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMN 490
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ +++ L E++++ M++R I+ IE + D
Sbjct: 491 EKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMD 550
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
KAFE++E + G ++ LC G++ A+ + K + ++ +A++
Sbjct: 551 KAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALL 610
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTC 331
G C R+ EA E++++G++ +L C
Sbjct: 611 HGYCGQGRLTEALSASCEMIQRGINMDLVC 640
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 149/345 (43%), Gaps = 14/345 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T+N +I +C A N+D+A ++ E+M + + D+ +Y LI LC G A+
Sbjct: 531 PTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDF 590
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
D+L +K + L + Y + C G+ +A ++++RG D + +
Sbjct: 591 IDDLHKKNLKLNEM-------CYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAV 643
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G ++ + + LL M + PD IY +ID + ++ + E L+ M+
Sbjct: 644 LIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEK 703
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ + + L + G + + ML NI N ++ L G+ +A
Sbjct: 704 CFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEAT 763
Query: 248 EIV-ELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
++ E+L KG +++ CK G+L EA K+L +N D + +I
Sbjct: 764 DLHHEML--KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYE 821
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C V A L ++ KG+ + N L+ G +++A
Sbjct: 822 HCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKA 866
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 38/221 (17%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD+ + ++I ++ G+ ++ + + M + + +Y+ + LC+ G+ D
Sbjct: 666 DQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEID 725
Query: 64 KAEKLFDELFEKEI------------VLCKFGSQPLA---------------ASYKPIFQ 96
+A LF+++ I L K G+ A A+Y + +
Sbjct: 726 RAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIR 785
Query: 97 YLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
C+ G+ +A +VL ++ + G D ++Y T+I HCR G EL MLR+ P
Sbjct: 786 GFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEP 845
Query: 156 D-----VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
D + IY C ++G L K A E ML P+
Sbjct: 846 DSVAFNLLIYGCCVNGALDK-----AFELRNDMLSRGLKPR 881
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 145/331 (43%), Gaps = 29/331 (8%)
Query: 32 KVFENMKNFQVTADSASYSILIRNLCQRGDYDKA-EKLF---DELFEKEIVLCKFGSQPL 87
+VF+ N V D + S +IR+LC+ D+ +A EK+ F+ IV
Sbjct: 204 EVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIV--------- 254
Query: 88 AASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLI 146
+Y + LC+ G +A V + + ++G +D ++Y T+++G CR +++G L+
Sbjct: 255 --TYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMN 312
Query: 147 WMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKG 206
M+ F+P L+DG +K A + + K+ + +LP +++++ L KG
Sbjct: 313 EMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALC-KG 371
Query: 207 FPHESARVTVMMLDRNIRQ-NINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE- 264
+ A +L +N+ N+ L+ + +L + ++ E + + I E
Sbjct: 372 EDLDKAE----LLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRET 427
Query: 265 ------VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCY 318
++ CK G L A L + +I G C+ +V +AF L
Sbjct: 428 IYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYR 487
Query: 319 ELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
E+ EK + + L+ L + ++ EA+
Sbjct: 488 EMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 143/332 (43%), Gaps = 27/332 (8%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T + +I S C + A + M++ + +Y++LI LC+ G
Sbjct: 211 NAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVL 270
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG---TQ 120
+A ++ L EK G + +Y + C + ++ ++++ G T+
Sbjct: 271 EALEVRKSLREK-------GLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTE 323
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
+S ++ G ++G ++ Y+L++ + R FLP++ +Y+ LI+ L K + L E L
Sbjct: 324 AAVS--GLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINA-LCKGEDLDKAELL 380
Query: 181 EKMLKSSYLPKTSTWHSILA-RLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
K + S LP +SIL ++G + M++ IR+ I I
Sbjct: 381 YKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLI----- 435
Query: 240 HGH-RDKAFEIVELLYKKGFCVKIE-------EVVQFLCKRGKLPEARKLLLFSLKNHHN 291
+GH + E LY K +E ++ CK ++ +A KL +
Sbjct: 436 NGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIA 495
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEK 323
+ A+I GLC N + EA L E+VE+
Sbjct: 496 PSVYTFTALIYGLCSTNEMAEASKLFDEMVER 527
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 11/322 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD TFN+LI+ C G L EA +F M + + +++IL+ LC+ G+ A+
Sbjct: 230 SPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDALCKEGNVKGAKN 289
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
+ + I +P +Y + C + KA+ VL I + G D SY
Sbjct: 290 ALAMMIKGSI-------KPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYN 342
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C+ L M + P+ Y+ LIDG + + A + +++M +
Sbjct: 343 IMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVN 402
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T+ S++ L + ++ + + D+ I+ N+ I+ L G A
Sbjct: 403 GQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNA 462
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
++ + L KG+ + I ++ LCK G +A LL N N ++ +I
Sbjct: 463 QDVFQDLLTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDINPNVVTYETIIRS 522
Query: 304 LCEINRVLEAFGLCYELVEKGL 325
L + +A L E+V +GL
Sbjct: 523 LFYKDYNEKAEKLLREMVARGL 544
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD ++N +I+ C ++EAL +F M+ +++ ++ +Y+ LI LC+ G A
Sbjct: 333 GVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHA 392
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
KL DE+ G P +Y + LC++ KA ++++I +G Q + +
Sbjct: 393 WKLVDEMHVN-------GQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYT 445
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G +N ++ +L + + ++ Y+ LI+G ++ A L KM
Sbjct: 446 YNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKME 505
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+ P T+ +I+ L K + ++ ++ M+ R +
Sbjct: 506 DNDINPNVVTYETIIRSLFYKDYNEKAEKLLREMVARGL 544
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 139/333 (41%), Gaps = 32/333 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + T+ TLI+ C G AL+V + V D YSI+I +LC+ A
Sbjct: 158 GFQLNQVTYATLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIIDSLCKDKLVIDA 217
Query: 66 EKLFDELFEKEIV------------LCKFGS----------------QPLAASYKPIFQY 97
+L+ E+ K I C G P ++ +
Sbjct: 218 YELYSEMIAKTISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDA 277
Query: 98 LCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC+ G + A+ L ++K + D ++Y +++ G+C +L + R PD
Sbjct: 278 LCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPD 337
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y+ +I+GF + A+ +M P T T++S++ L + G + ++
Sbjct: 338 AQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVD 397
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRG 273
M +I + I+ L + H DKA +V+ + +G + ++ LCK G
Sbjct: 398 EMHVNGQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGG 457
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
+L A+ + L ++++I N +I GLC+
Sbjct: 458 RLKNAQDVFQDLLTKGYSLNIRTYNILINGLCK 490
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 115/255 (45%), Gaps = 8/255 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G PD T+N+L+ +C +++A V + V D+ SY+I+I C+ ++
Sbjct: 297 GSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNE 356
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
A LF+E+ + I P +Y + LC+ G+ A +++ ++ G D
Sbjct: 357 ALSLFNEMRCQRI-------SPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIF 409
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++I C+ + L+ + + P++ Y+ LIDG + + A + + +
Sbjct: 410 TYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDL 469
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
L Y T++ ++ L ++G ++ + M D +I N+ I LF +
Sbjct: 470 LTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDINPNVVTYETIIRSLFYKDYN 529
Query: 244 DKAFEIVELLYKKGF 258
+KA +++ + +G
Sbjct: 530 EKAEKLLREMVARGL 544
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 150/355 (42%), Gaps = 27/355 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT T NTL+ C G + EAL + + + +Y+ LI LC+ G+ A
Sbjct: 123 GYQPDTITLNTLVKGFCLNGKVKEALHFHDRVLALGFQLNQVTYATLINGLCKMGETRAA 182
Query: 66 ----EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQ 120
K+ +L ++V+ Y I LC+ A + + I K +
Sbjct: 183 LQVLRKIDGKLVNTDVVM-----------YSIIIDSLCKDKLVIDAYELYSEMIAKTISP 231
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D +++ ++I G C G + + L M+ ++ P+ ++ L+D ++ A L
Sbjct: 232 DVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDALCKEGNVKGAKNAL 291
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
M+K S P T++S++ +++ V L R + +S ++
Sbjct: 292 AMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHV----LSTIARMGVAPDAQSYNIMING 347
Query: 241 GHRDKAFEIVELLYKKGFCVKI-------EEVVQFLCKRGKLPEARKLLLFSLKNHHNVD 293
+ K L+ + C +I ++ LCK G++ A KL+ N D
Sbjct: 348 FCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPD 407
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I +++I LC+ N + +A L ++ ++G+ + N L+ L G+++ A
Sbjct: 408 IFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNA 462
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N LI C G L A VF+++ + + +Y+ILI LC+ G +D
Sbjct: 436 DQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYNILINGLCKEGLFD 495
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
KAE L ++ + +I P +Y+ I + L KAE++LR+++ RG
Sbjct: 496 KAEALLSKMEDNDI-------NPNVVTYETIIRSLFYKDYNEKAEKLLREMVARG 543
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 145/347 (41%), Gaps = 14/347 (4%)
Query: 8 SPDTCTFNTLIHSHC-SAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+P FN ++ S + + + + F M+ + + I+I C + + A
Sbjct: 54 TPSIVEFNKILTSLVKTKTHYNTVISFFRKMQFNGIVPSIVTLGIVINCYCHLREINFAF 113
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
LF ++ K G QP + + + C +GK ++A +++ G Q + ++Y
Sbjct: 114 SLFGKIL-------KMGYQPDTITLNTLVKGFCLNGKVKEALHFHDRVLALGFQLNQVTY 166
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLL-AMETLEKML 184
T+I G C+ G ++L + + DV +Y +ID L KDK ++ A E +M+
Sbjct: 167 ATLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIIDS-LCKDKLVIDAYELYSEMI 225
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++S++ G E+ + M+ +NI N ++ L G+
Sbjct: 226 AKTISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDALCKEGNVK 285
Query: 245 KAFEIVELLYK---KGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
A + ++ K K V ++ C ++ +A+ +L + D N +I
Sbjct: 286 GAKNALAMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMI 345
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G C+I V EA L E+ + + N L+ L G++ A
Sbjct: 346 NGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHA 392
>Medtr6g005000.1 | PPR containing plant-like protein | HC |
chr6:556927-554990 | 20130731
Length = 645
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 14/333 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD T+N LI+ +C L++A +++ M V + SYS L+ LC+ G +A
Sbjct: 293 GFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEA 352
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLC-EHGKTRKAERVLRQIMKRGTQ-DPL 123
+LF+++ ++ G P SY + C E GK + +L +++ G + D +
Sbjct: 353 HQLFNQMVQR-------GIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNV 405
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+ V G+ REG + ++ + R +YD L+ ++ +P A L ++
Sbjct: 406 TCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRI 465
Query: 184 LK-SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ Y+P+ ST+ + L E+ + M ++++ N+ I L
Sbjct: 466 SQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKR 525
Query: 243 RDKAFEIVELLYKKGFCVKIE---EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
+A ++E + G +E ++ C+ + +A LL F K D + NA
Sbjct: 526 TSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNA 585
Query: 300 VILGLCEINRVLEAFGLCYELVEKG-LHQELTC 331
++ CE+ V E L +LV+ G + LTC
Sbjct: 586 IVKVFCEVGNVAELMELQDKLVKIGYVPNSLTC 618
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 90/234 (38%), Gaps = 37/234 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLC-------- 57
G PD T + + G L AL + ++ F + Y L+ LC
Sbjct: 399 GIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAA 458
Query: 58 --------QRGDYDKAEKLFDELFEKEIVLCKFGSQPLA----------------ASYKP 93
Q GDY + +L E LC F + A +YK
Sbjct: 459 RSFLIRISQDGDYVPEMSTYIKLAES---LCSFNNVEEALILKSEMAKKSMKLNLTTYKA 515
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY-MTVIMGHCREGAYENGYELLIWMLRRD 152
I LC +T +AE +L +++ G L +I G+C E + LL + +
Sbjct: 516 IISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEF 575
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKG 206
+ D E Y+ ++ F + ME +K++K Y+P + T ++ R L+KG
Sbjct: 576 QVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVI-RGLQKG 628
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 163/369 (44%), Gaps = 6/369 (1%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ DT NT++ C G + +AL+ + + N + + SY ILI LC+ G ++A
Sbjct: 107 GYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEA 166
Query: 66 EKLFDELFEKEIVLCK-FGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPL 123
L + +++ F + Y + LC +G + ++M G +
Sbjct: 167 VNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEF 226
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++I G C G + G+ L+ M+RR V ++ LIDG + + A E ++M
Sbjct: 227 TYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEM 286
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ Y P T +++ KG + + + + ++++ I G
Sbjct: 287 VNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRV 346
Query: 244 DKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
A + + + ++G V ++ LCK G++ A +++ ++ DI C +
Sbjct: 347 RDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCIL 406
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
+ GLC+ R+ +A L +LVE GL ++ L+ ++ EA + + + L+N
Sbjct: 407 LDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMH-LKN 465
Query: 361 LDRSVLSYS 369
L +++YS
Sbjct: 466 LVPHIVTYS 474
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 156/359 (43%), Gaps = 23/359 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--------KNFQVTADSASYSILIRN 55
+ GFS + ++ LI+ C G ++EA+ + + F V + YSI+I
Sbjct: 140 NNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDC 199
Query: 56 LCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM 115
LC+ G D+ + ++E+ G P +Y + + LC GK + ++ +++
Sbjct: 200 LCRNGFVDEGFEFYNEMMGN-------GVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMI 252
Query: 116 KRGTQDPLSYMTVIM-GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPL 174
+RG + TV++ G C+ G E+ M+ R + P++ L+ G+ K
Sbjct: 253 RRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVD 312
Query: 175 LAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI 234
+A E + + + + T++ + + G ++ RV M + NI I
Sbjct: 313 MARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLI 372
Query: 235 ELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHN 291
+ L G A+EIV+ +++ G I ++ LCK +L +A +LLF+
Sbjct: 373 DCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQA--ILLFNQLVESG 430
Query: 292 VDIDLCNAVIL--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ D+ + IL G C R+ EA L ++ K L + + L+ L G++ A
Sbjct: 431 LTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNA 489
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 8/234 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ GF D T+N IH +C G + +A++VF+ M V + +Y+ LI LC+ G+
Sbjct: 322 GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEV 381
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
A ++ + G P + + LC+ + +A + Q+++ G T D
Sbjct: 382 SGAWEIVKTMHRS-------GLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPD 434
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
SY +I G C LL M ++ +P + Y CLIDG + + A L
Sbjct: 435 VWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLN 494
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
+M LP T T+ +L L +K E+ + M+ R + ++ T I+
Sbjct: 495 EMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMID 548
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 162/385 (42%), Gaps = 37/385 (9%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M G+G P+ T+ +LI C G E + + M + +++LI LC+ G
Sbjct: 216 MMGNG-VCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNG 274
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
+A ++FDE+ + G +P + + C G A + I + G
Sbjct: 275 MLVEAREMFDEMVNR-------GYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFK 327
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+D +Y I G+C+ G + + M R +P++ Y+ LID + + A E
Sbjct: 328 RDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEI 387
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV--TVMMLDRNIRQNINLSTKSIELL 237
++ M +S P T +L L + S R+ +++ ++ + + S +L
Sbjct: 388 VKTMHRSGLTPDIVTCCILLDGLCK------SKRLDQAILLFNQLVESGLTPDVWSYTIL 441
Query: 238 FGHG-----HRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNH 289
HG +A ++ ++ K V ++ LC+ G++ A +LL N
Sbjct: 442 I-HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLL-----NE 495
Query: 290 HNVDIDLCNAVIL-----GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGK 344
+V L + + L + + EA L +++++GL ++ C ++ +
Sbjct: 496 MHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSER 555
Query: 345 VEEAAFISKRIPGLENLDRSVLSYS 369
++EA + + + ++NL +++Y+
Sbjct: 556 IDEAINLFREMH-MKNLVPDIVTYT 579
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
FN +I+ C G LDEA +VF+ MKN + D SYSILI C++G D+A ++F E+
Sbjct: 254 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 313
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMGH 132
I+ P SY + C+ G+ KA V ++ G D SY +I G
Sbjct: 314 NSGIL-------PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGF 366
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
CR+G ++ + M +F P Y LI G+ + + A++ M K P T
Sbjct: 367 CRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDT 426
Query: 193 STWHSILA 200
+ IL+
Sbjct: 427 IACNHILS 434
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 30/229 (13%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P+ +++ LI C G +D+AL+VFE MKN + D SYSILI C++GD D
Sbjct: 314 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 373
Query: 64 KAEKLFDELFEKEI----------------------------VLCKFGSQPLAASYKPIF 95
A K ++E+ ++ K G P + I
Sbjct: 374 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 433
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
C KA + + + G +P SY I CR E +LL ML+R+ L
Sbjct: 434 SIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVL 493
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLL 203
PDV Y LI F ++ A+ KM K T ++IL L
Sbjct: 494 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKT-YTILINLF 541
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 27/316 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ T+ T I C G A ++ +N+ ++ ++ +I LCQ G D+A
Sbjct: 211 GETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEA 270
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
++F E+ I+ P SY + C G+ +A V +++ G + S
Sbjct: 271 SEVFKEMKNSGIL-------PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYS 323
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+EG + E+ M LPDV Y LIDGF +K A++ E+M
Sbjct: 324 YSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMT 383
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI---ELLFGHG 241
+++ P + S++ KG+ ++S + + + I Q + + +I +L +
Sbjct: 384 SNNFSPSAFNYCSLI-----KGY-YKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYC 437
Query: 242 HR---DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPE-ARKLLLFSLKNHHNVDI 294
+ +KA + E + G E + +C RG +PE A +LL LK NV
Sbjct: 438 RKPDFNKALALSEKFQENGVHFNPYSYNEFIHRIC-RGSVPEKALQLLPVMLK--RNVLP 494
Query: 295 DLCNAVILGLCEINRV 310
D+ N L C R+
Sbjct: 495 DVVNYSTLISCFAKRL 510
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 9/230 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD +++ LI C G +D+A +VF+ M+N + + SYSILI C+ G D
Sbjct: 279 NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVD 338
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
KA ++F+E+ I+ P SY + C G A + ++ +
Sbjct: 339 KALEVFEEMKNSGIL-------PDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSA 391
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y ++I G+ + + N + M + PD + ++ + +K A+ EK
Sbjct: 392 FNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEK 451
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN-INLST 231
++ +++ + R+ P ++ ++ +ML RN+ + +N ST
Sbjct: 452 FQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYST 501
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 15/277 (5%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
F+ LI S L+ A VF K+ + + S + L++ L + D LF+
Sbjct: 109 VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFE-- 166
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCE----HGKTRKAERVLRQIMKRG-TQDPLSYMT 127
VL KFG +P +Y + + C R+A +L +I G T + ++Y T
Sbjct: 167 -----VLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 221
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
I G C+ G + + L+ + R++ + ++ +I G Q A E ++M S
Sbjct: 222 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 281
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
LP ++ ++ KG +++ V M + I NI + I+ G DKA
Sbjct: 282 ILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKAL 341
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKL 281
E+ E + G + ++ C++G + A K
Sbjct: 342 EVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKF 378
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + + T+ LI+ S +D A ++F+ MK +V D +Y+ L+ C G+ +A
Sbjct: 526 GITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRA 585
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LFDE+ + G P +Y + K +A ++ ++ +RG D +
Sbjct: 586 RALFDEMSRE-------GCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQIL 638
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRD-FLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y +I C G L M + P+V +Y CLI+ +++ +K A + E+M
Sbjct: 639 YTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEM 698
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 107/266 (40%), Gaps = 10/266 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT N ++ +C + ++AL + E + V + SY+ I +C+ +KA
Sbjct: 421 GMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKA 480
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+L + ++ ++ P +Y + + + KA + ++ K G T + +
Sbjct: 481 LQLLPVMLKRNVL-------PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKT 533
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I + + Y L M PD Y L+ GF + A ++M
Sbjct: 534 YTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS 593
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ + L+ +++ ++ M +R + + L T I G +
Sbjct: 594 REGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMN 653
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLC 270
+A + + + ++G C VV + C
Sbjct: 654 RAEALFDEMKQEGRCTP--NVVMYTC 677
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP+ T+ I+ + ++A K++E MK V D Y++LI C G+ ++A
Sbjct: 596 GCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRA 655
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
E LFDE+ K+ C P Y + + K +AE++ ++ +G
Sbjct: 656 EALFDEM--KQEGRC----TPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 702
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 153/359 (42%), Gaps = 22/359 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T N L++ A + A +F + + +++ L++ +C G+ A L
Sbjct: 88 PNFHTINILLNCFAQAKKANLAFSMFAKLLKLGYEPNIITFNSLLKAMCFNGEVQMALDL 147
Query: 69 FDELFEKEIVLCKFGSQPLA-ASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMT 127
D+L K PL SY + LC+ + A VL+++ D + Y T
Sbjct: 148 HDKL--------KKAGVPLTIVSYGTLISGLCKINRHDAAMLVLKKMKVCVPPDAIIYKT 199
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I C++ E EL M+ PDV Y LI G D A E ++M+ +
Sbjct: 200 IIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAFEFFKEMVSNE 259
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---GHRD 244
P T+ +++A L ++ ES + M+ + ++ + +E GH
Sbjct: 260 INPTVYTYSALMAYLCKRKRVRESKALLNTMIKDGLEPDLAIFNTLME---GHCSLHQMQ 316
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRG-KLPEARKLLLFSLKNHHNVDIDLC--N 298
KA I L ++G I + + L +G +PE L LF V DL N
Sbjct: 317 KAKRIFYSLPQRGITPDIYSYNILFKGLLSQGLNIPE-ETLPLFEDMKSKKVSPDLITYN 375
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPG 357
+I G+C +R+ A+ E+V+KG+ + N L+ AL K++EA ++ RI G
Sbjct: 376 TIIHGMCNFSRMDCAWDFIGEMVDKGIQPDAATYNPLLKALCREKKIDEAIALTNRISG 434
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 144/347 (41%), Gaps = 13/347 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD + T+I C ++ AL+++ M + D +Y+ LI LC ++ A +
Sbjct: 192 PDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAFEF 251
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
F E+ EI P +Y + YLC+ + R+++ +L ++K G + L+
Sbjct: 252 FKEMVSNEI-------NPTVYTYSALMAYLCKRKRVRESKALLNTMIKDGLEPDLAIFNT 304
Query: 129 IM-GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQK--DKPLLAMETLEKMLK 185
+M GHC + + + +R PD+ Y+ L G L + + P + E M
Sbjct: 305 LMEGHCSLHQMQKAKRIFYSLPQRGITPDIYSYNILFKGLLSQGLNIPEETLPLFEDMKS 364
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+++I+ + + M+D+ I+ + ++ L D+
Sbjct: 365 KKVSPDLITYNTIIHGMCNFSRMDCAWDFIGEMVDKGIQPDAATYNPLLKALCREKKIDE 424
Query: 246 AFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A + + +G ++ K G+ A+ + K +++ + + + ++
Sbjct: 425 AIALTNRISGQGIQLDAYTFTILIDAFWKSGRFEAAQATFWDAFKKGYDLTLAVFHVMLK 484
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
GLCE + EA + ++ +KG +V AL ++E+A
Sbjct: 485 GLCENHMFDEAIKILSKMKKKGCTPNKAIYEVIVYALFENDEIEKAT 531
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 142/328 (43%), Gaps = 13/328 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD T+ TLIH C + N A + F+ M + ++ +YS L+ LC+R
Sbjct: 222 ESGIFPDVFTYTTLIHGLCISDNFKAAFEFFKEMVSNEINPTVYTYSALMAYLCKRKRVR 281
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+++ L + + K G +P A + + + C + +KA+R+ + +RG T D
Sbjct: 282 ESKALLN-------TMIKDGLEPDLAIFNTLMEGHCSLHQMQKAKRIFYSLPQRGITPDI 334
Query: 123 LSYMTVIMGHCREG--AYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
SY + G +G E L M + PD+ Y+ +I G + A + +
Sbjct: 335 YSYNILFKGLLSQGLNIPEETLPLFEDMKSKKVSPDLITYNTIIHGMCNFSRMDCAWDFI 394
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
+M+ P +T++ +L L + E+ +T + + I+ + T I+ +
Sbjct: 395 GEMVDKGIQPDAATYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAFWKS 454
Query: 241 GHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
G + A +KKG+ + + +++ LC+ EA K+L K + +
Sbjct: 455 GRFEAAQATFWDAFKKGYDLTLAVFHVMLKGLCENHMFDEAIKILSKMKKKGCTPNKAIY 514
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGL 325
++ L E + + +A L YE+ G
Sbjct: 515 EVIVYALFENDEIEKATKLVYEMSRMGF 542
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 45/222 (20%)
Query: 6 GFSPDTCTFNTLIHSHCSAG-NL-DEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
G +PD ++N L S G N+ +E L +FE+MK+ +V+ D +Y+ +I +C D
Sbjct: 329 GITPDIYSYNILFKGLLSQGLNIPEETLPLFEDMKSKKVSPDLITYNTIIHGMCNFSRMD 388
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A E+ +K G QP AA+Y P+ + LC K +A + +I +G Q D
Sbjct: 389 CAWDFIGEMVDK-------GIQPDAATYNPLLKALCREKKIDEAIALTNRISGQGIQLDA 441
Query: 123 LSYMTVIMGHCREG-----------AYENGYEL------------------------LIW 147
++ +I + G A++ GY+L L
Sbjct: 442 YTFTILIDAFWKSGRFEAAQATFWDAFKKGYDLTLAVFHVMLKGLCENHMFDEAIKILSK 501
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
M ++ P+ IY+ ++ + D+ A + + +M + +L
Sbjct: 502 MKKKGCTPNKAIYEVIVYALFENDEIEKATKLVYEMSRMGFL 543
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+N L+ + C +DEA+ + + + D+ +++ILI + G ++
Sbjct: 399 DKGIQPDAATYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAFWKSGRFE 458
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ F + F+K G A + + + LCE+ +A ++L ++ K+G T +
Sbjct: 459 AAQATFWDAFKK-------GYDLTLAVFHVMLKGLCENHMFDEAIKILSKMKKKGCTPNK 511
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
Y ++ E +L+ M R FL
Sbjct: 512 AIYEVIVYALFENDEIEKATKLVYEMSRMGFL 543
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 149/353 (42%), Gaps = 12/353 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T L++ +C G + + + +S +++ LI+ +C G +A
Sbjct: 40 GIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEA 99
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
LF +V G + SY + LC+ G+TR A ++LR+ D + Y
Sbjct: 100 L-----LFHDHVV--AHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNA--DVVMY 150
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I C+ + Y L M+ + P+V + L+D + K AM L M+K
Sbjct: 151 STIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMK 210
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ +I+ +++ + +M+ + N+ I L D+
Sbjct: 211 KGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDE 270
Query: 246 AFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A + + ++ K V ++ LCK GK+ + +L+ VDI N+++
Sbjct: 271 AMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLH 330
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
LC+ + + +A L E+ ++G+ + L+ L G++E+A I + I
Sbjct: 331 ALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEI 383
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +N +I+ C +DEA+ +F+ M ++ D +Y+ILI LC+ G +
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTS 306
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+L DE+ G +Y + LC++ +A ++++I +G Q + +
Sbjct: 307 LELVDEMRS-------IGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCT 359
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C++G E+ Y + +L + V Y+ +I+G +K A+ L +M
Sbjct: 360 YTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRME 419
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMM----LDRNIRQNINLST 231
++ +P ++ +I+ L EKG ++ ++ M L + +++ +N++T
Sbjct: 420 DNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTT 470
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 161/370 (43%), Gaps = 33/370 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P++ TF TLI C G EAL +++ D SY+IL+ LC+ G+ A
Sbjct: 75 GYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAA 134
Query: 66 EKLF-------DELFEKEIV--LCKF----------------GSQPLAASYKPIFQYLCE 100
++ D + I+ LCK G P ++ + LC+
Sbjct: 135 MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCK 194
Query: 101 HGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
K ++A +L +MK+G + + ++Y ++ G+C + M++ P+V
Sbjct: 195 DRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWC 254
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
Y+ +I+G +K + AM ++M P T++ ++ L + G S + M
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEM- 313
Query: 220 DRNIRQNINLSTKS--IELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGK 274
R+I + +++ T + + L + H D+A +V+ + +G + ++ LCK G+
Sbjct: 314 -RSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGR 372
Query: 275 LPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLND 334
L +A + L +++ + N +I GLC+ EA L + + +
Sbjct: 373 LEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYET 432
Query: 335 LVTALEARGK 344
++ AL +G+
Sbjct: 433 IIYALSEKGE 442
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 148/351 (42%), Gaps = 17/351 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+ D ++T+I S C + +A +++ M + + ++SIL+ LC+ +A
Sbjct: 144 NADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMN 203
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L + +K G +P +Y I C + KA + +++ G + + Y
Sbjct: 204 LLAMMMKK-------GVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYN 256
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C++ + L M + PDV Y+ LIDG + K ++E +++M
Sbjct: 257 IIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSI 316
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
T++S+L L + ++ + + D+ I+ N+ T I+ L G + A
Sbjct: 317 GKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDA 376
Query: 247 FEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+ I + + +G+ + + ++ LCK+G EA LL N D +I
Sbjct: 377 YVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYA 436
Query: 304 LCEINRVLEAFGLCYELVEKGLHQEL------TCLNDLVTALEARGKVEEA 348
L E ++ L ++ +GL + L T + DL A +E+
Sbjct: 437 LSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADLNDKWAAYASLEDG 487
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSASYSILIRNLCQRGD 61
D G P+ CT+ TLI C G L++A +F+ + + + +T +Y+++I LC++G
Sbjct: 350 DQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITV--WTYNVMINGLCKKGL 407
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+D+A L + + + P A SY+ I L E G+T K ++L ++ RG
Sbjct: 408 FDEALALLSRMEDNACI-------PDAVSYETIIYALSEKGETVKTNKLLCAMIVRG 457
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 136/323 (42%), Gaps = 52/323 (16%)
Query: 52 LIRNLCQRGDYDKAEKLFDELFEKEIVLCKF-GSQPLAASYKPIFQYLCEHGKTRKAERV 110
++ +L + Y A LF +L +F G +P + + C G +
Sbjct: 16 ILASLVKINHYPTAISLFRQL--------EFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67
Query: 111 LRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIW---MLRRDFLPDVEIYDCLIDG 166
L +I+K G + + +++ T+I G C G YE L++ ++ F D Y L++G
Sbjct: 68 LTKILKMGYEPNSITFTTLIKGMCLNG---QAYEALLFHDHVVAHGFKLDQVSYAILMNG 124
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+ + AM+ L K ++ + ST I+ L + F ++ R+ M+ + I N
Sbjct: 125 LCKMGETRAAMQMLRKTWVNADVVMYST---IIDSLCKGKFVTDAYRLYSEMIAKGIFPN 181
Query: 227 INLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSL 286
+ F I+ V LCK K +A LL +
Sbjct: 182 V-----------------YTFSIL---------------VDALCKDRKGKQAMNLLAMMM 209
Query: 287 KNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVE 346
K ++ A++ G C +N+V +A + +V++G+ + C N ++ L + +V+
Sbjct: 210 KKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVD 269
Query: 347 EAAFISKRIPGLENLDRSVLSYS 369
EA + K + + ++ V++Y+
Sbjct: 270 EAMNLFKEM-HWKKINPDVVTYN 291
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 164/348 (47%), Gaps = 17/348 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ T+N LI C AG L+ ALKV + MK + + + +I+I LC+ D+A
Sbjct: 409 APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACS 468
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
+F L K +C P + ++ + L G+ A + +++ Q P + Y
Sbjct: 469 IFLGLDHK---VC----SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD-SDQIPNVVVY 520
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I + G E+G+++ M+ R PD+ + + +D + + E++
Sbjct: 521 TSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKA 580
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+P ++ ++ L++ GF E+ ++ M ++ + ++ I+ G DK
Sbjct: 581 QGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDK 640
Query: 246 AFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAV 300
A++++E + KG V VV L K +L EA +LF VD+++ +++
Sbjct: 641 AYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA--YMLFEEAKSIGVDLNVVIYSSL 698
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
I G ++ R+ EA+ + EL++KGL N L+ AL +++EA
Sbjct: 699 IDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEA 746
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 158/354 (44%), Gaps = 17/354 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD N+ + AG +++ +FE +K + D SYSILI L + G +
Sbjct: 547 GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRET 606
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-LS 124
KLF E+ E+ G +Y + C+ GK KA ++L ++ +G Q ++
Sbjct: 607 YKLFYEMKEQ-------GLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT 659
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +V+ G + + Y L +V IY LIDGF + + A LE+++
Sbjct: 660 YGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELM 719
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIEL--LFGHGH 242
+ P + TW+ +L L+ K + A+V + +N++ + N T SI + L
Sbjct: 720 QKGLTPNSYTWNCLLDALV-KAEEIDEAQVCFQNM-KNLKCSPNAMTYSIMINGLCMIRK 777
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC-N 298
+KAF + + K+G + ++ L K G + EAR L K V C N
Sbjct: 778 FNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARG-LFDRFKASGGVPDSACYN 836
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFIS 352
A+I GL N+ ++A+ + E KG L+ AL +E+AA +
Sbjct: 837 AMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVG 890
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 161/372 (43%), Gaps = 21/372 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ + F TL+ G +D AL + + MK+ TAD Y++ I + G D A
Sbjct: 233 GYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMA 292
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLS 124
K F E+ + +V P +Y + LC+ + +A + ++ + R +
Sbjct: 293 WKFFHEMKAQGLV-------PDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYA 345
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+IMG+ G ++ Y LL R+ +P V Y+C++ +K K A+ ++M
Sbjct: 346 YNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR 405
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ + P +T++ ++ L + G + +V M + + NI I+ L D
Sbjct: 406 QDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLD 464
Query: 245 KAFEIVELLYKK-------GFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
+A I L K FC ++ L +RG++ +A L L + ++ +
Sbjct: 465 EACSIFLGLDHKVCSPDSRTFC----SLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVY 520
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPG 357
++I + R + + E+V +G +L LN + + G+VE+ + + I
Sbjct: 521 TSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKA 580
Query: 358 LENLDRSVLSYS 369
+ L V SYS
Sbjct: 581 -QGLVPDVRSYS 591
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 159/430 (36%), Gaps = 67/430 (15%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F+ D +N I G +D A K F MK + D +Y+ LI LC+ D+A
Sbjct: 269 FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAV 328
Query: 67 KLFDELFEKEIVLCKF----------------------------GSQPLAASYKPIFQYL 98
+LF+EL V C + G P +Y I L
Sbjct: 329 ELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCL 388
Query: 99 CEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL---- 154
GK +A R+ ++ + + +Y +I C+ G E ++ M
Sbjct: 389 GRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIM 448
Query: 155 -------------------------------PDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
PD + LIDG ++ + A EKM
Sbjct: 449 TVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKM 508
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
L S +P + S++ + G + ++ M+ R ++ L ++ +F G
Sbjct: 509 LDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEV 568
Query: 244 DKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+K + E + +G + ++ L K G E KL + ++D+ N V
Sbjct: 569 EKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTV 628
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
I G C+ +V +A+ L E+ KGL + +V L +++EA + + +
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSI-G 687
Query: 361 LDRSVLSYSS 370
+D +V+ YSS
Sbjct: 688 VDLNVVIYSS 697
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 138/329 (41%), Gaps = 53/329 (16%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD TFN+LI+ C G L EA +F M + + +++IL+ LC+ G+ A+
Sbjct: 243 SPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLKGAKN 302
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYM 126
L V+ K G P +Y I C + KA+ VL I + G D SY
Sbjct: 303 LLA-------VMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYN 355
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C+ + L M R P+ Y LIDG + + A E +++M +
Sbjct: 356 IMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDN 415
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T++S+ I+ L + H DKA
Sbjct: 416 GQPPDICTYNSL-----------------------------------IDALCKNHHVDKA 440
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKL------LLFSLKNHHNV-DIDL 296
+V+ + +G + + ++ LCK+G+L +A+ L LL ++++ V D
Sbjct: 441 IVLVKKIKDQGIQLNMYTYNILIDGLCKQGRLKDAQGLLNEAETLLSKMEDNGCVPDAVT 500
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGL 325
C +I L E ++ A L E++ +GL
Sbjct: 501 CETIIRALFENDKNERAEKLLREMIARGL 529
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 158/363 (43%), Gaps = 43/363 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T TFNTLI+ C G + EAL ++M + + +Y+ LI LC+ G +A
Sbjct: 136 GHHPTTITFNTLINGMCLNGKIKEALHFHDHMLAHEFHLNQVTYAKLINGLCKMGKTTEA 195
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
+L ++ K + + I LC+ +A + Q I+K+ + D ++
Sbjct: 196 LQLLRKIDGKLV-------NNNVIMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVT 248
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++I G C G + L M+ ++ P+V ++ L+D ++ A L M+
Sbjct: 249 FNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLKGAKNLLAVMM 308
Query: 185 KSSYLPKTSTWHSI----------------LARLLEKGFPHESARVTVMMLDRNIRQNIN 228
K +P T+ SI L+ + G P ++ +M IN
Sbjct: 309 KEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIM---------IN 359
Query: 229 LSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFS 285
K I+++ ++AF + + +G V ++ LCK G++ A + +
Sbjct: 360 GFCK-IKMI------NEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEM 412
Query: 286 LKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKV 345
N DI N++I LC+ + V +A L ++ ++G+ + N L+ L +G++
Sbjct: 413 RDNGQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNILIDGLCKQGRL 472
Query: 346 EEA 348
++A
Sbjct: 473 KDA 475
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 150/354 (42%), Gaps = 27/354 (7%)
Query: 8 SPDTCTFNTLIHSHCSAGN--LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
+P FN ++ S N A+ + ++ +TAD+ +++ILI C G+ A
Sbjct: 66 TPSILEFNKILGSLVKTNNNHYTAAISLSHQLELNGITADTVTFNILINCYCHLGEMTFA 125
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+F ++ K G P ++ + +C +GK ++A ++ + ++
Sbjct: 126 FSIFAKIL-------KLGHHPTTITFNTLINGMCLNGKIKEALHFHDHMLAHEFHLNQVT 178
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G +LL + + +V +++ +ID ++ A E +M+
Sbjct: 179 YAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQMI 238
Query: 185 KSSYLPKTSTWHS------ILARLLEK-GFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
P T++S I+ +L+E G HE M+ +NI N+ ++ L
Sbjct: 239 VKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHE-------MVLKNINPNVYTFNILVDAL 291
Query: 238 FGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
G+ A ++ ++ K+G V ++ C ++ +A+ +L + D
Sbjct: 292 CKEGNLKGAKNLLAVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDA 351
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N +I G C+I + EAF L E+ +G+ + L+ L G++ A
Sbjct: 352 QSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYA 405
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD CT+N+LI + C ++D+A+ + + +K+ + + +Y+ILI LC++G
Sbjct: 414 DNGQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNILIDGLCKQGRLK 473
Query: 64 KAEKLFDELFEKEIVLCKF---GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
A+ L + E E +L K G P A + + I + L E+ K +AE++LR+++ RG
Sbjct: 474 DAQGLLN---EAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARG 528
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVT 215
D ++ LI+ + + A K+LK + P T T+++++ + G E+
Sbjct: 105 DTVTFNILINCYCHLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKIKEALHFH 164
Query: 216 VMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKK---GFCVKIEEVVQFLCKR 272
ML N K I L G +A +++ + K + ++ LCK
Sbjct: 165 DHMLAHEFHLNQVTYAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLCKE 224
Query: 273 GKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCL 332
+ EA +L + + D+ N++I G C + +++EAFGL +E+V K ++ +
Sbjct: 225 KLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTF 284
Query: 333 NDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
N LV AL G ++ A + + E + +V++YSS
Sbjct: 285 NILVDALCKEGNLKGAKNLLAVMMK-EGVIPNVVTYSS 321
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 147/329 (44%), Gaps = 19/329 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +NT+I S C ++EA ++ M + ++ D +YS LI G A L
Sbjct: 40 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 99
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+++ + I +P ++ + C+ GK ++ + V +MK+G + + ++Y +
Sbjct: 100 FNKMILENI-------KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 152
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C + M + PD + Y+ +I+GF + K AM +KM +
Sbjct: 153 LMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKN 212
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+P T+ S++ L + G + ++ M DR + +I + ++ L + DKA
Sbjct: 213 IIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 272
Query: 248 --------EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
++ E L+ KG+ + + ++Q C +G EA LL N D
Sbjct: 273 ALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 332
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGL 325
+IL L + + A L E++ +GL
Sbjct: 333 YEIIILSLFKKDENDMAEKLLREMIARGL 361
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG +PDT ++N +I+ C +DEA+ +F+ M + + +Y+ LI LC+ G
Sbjct: 176 GGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISY 235
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA--------ERVLRQIMK 116
A KL DE+ ++ G P +Y I LC++ + KA ++V +
Sbjct: 236 ALKLVDEMHDR-------GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFV 288
Query: 117 RGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLL 175
+G D +Y +I G C +G + LL M +PD + Y+ +I +KD+ +
Sbjct: 289 KGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDM 348
Query: 176 AMETLEKMLKSSYL 189
A + L +M+ L
Sbjct: 349 AEKLLREMIARGLL 362
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+ +L+ +C +++A +F M V D+ SY+I+I C+ D+A
Sbjct: 142 GIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEA 201
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF ++ K I+ P +Y + LC+ GK A +++ ++ RG D ++
Sbjct: 202 MNLFKKMHCKNII-------PNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 254
Query: 125 YMTVIMGHCREGAYENGYELLIW--------MLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
Y +++ C+ + LL + + + DV Y +I GF K A
Sbjct: 255 YSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEA 314
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEK 205
+ L KM + +P T+ I+ L +K
Sbjct: 315 LALLSKMEDNGRIPDAKTYEIIILSLFKK 343
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 15/275 (5%)
Query: 89 ASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIW 147
SY + LC+ G+ R A ++LR++ + Q + + Y T+I C+ ++L
Sbjct: 8 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 67
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M+ PDV Y LI GF K A++ KM+ + P T++ ++ + G
Sbjct: 68 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 127
Query: 208 PHESARVTVMMLDRNIRQNINLSTKSIELLFGH---GHRDKAFEIVELLYKKGFCVKIEE 264
E V MM+ + I+ N+ L+ G+ +KA I + + G +
Sbjct: 128 MKEGKTVFAMMMKQGIKPNV---VTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQS 184
Query: 265 ---VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNAVILGLCEINRVLEAFGLCYE 319
++ CK K+ EA LF + N+ ++ ++I GLC+ ++ A L E
Sbjct: 185 YNIMINGFCKIKKVDEAMN--LFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDE 242
Query: 320 LVEKGLHQELTCLNDLVTALEARGKVEEA-AFISK 353
+ ++G+ ++ + ++ AL +V++A A ++K
Sbjct: 243 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 277
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 156/350 (44%), Gaps = 17/350 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G +P+T +NTL+H+ C G + A + M V + +++ILI + + +
Sbjct: 205 NNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEM----VDPNEVTFNILISSYYKEENLV 260
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDP 122
+A L ++ F +V P + + + LC G+ +A VL ++ G+ D
Sbjct: 261 QALVLLEKCFALSLV-------PDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDA 313
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y T+I G C G + G L M + +LP+V+ Y+ LI GF + LA++
Sbjct: 314 VAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFND 373
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M T+ +++ L +G + + +M + ++S + +++G
Sbjct: 374 MKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYN-SIIYGLFK 432
Query: 243 RDKAFEIVELLYKKG--FCVKIEEVVQFL--CKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+++ E E L K G F ++ + + CK G + +A+ + + I + N
Sbjct: 433 QNRFDEASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYN 492
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+++ G + + EA L E++ + N ++T +GK+E A
Sbjct: 493 SLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESA 542
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 6/252 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ T+N LI+ C + LD AL +F +MK + + ++ +IR LC G +
Sbjct: 343 GYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDG 402
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+ EL E+ K GS+ + Y I L + + +A L ++ K +
Sbjct: 403 FSIL-ELMEE----TKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRAVDRS 457
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
MT+I C+EGA E+ + M+ +P + +Y+ L+ GF Q A+E + +M+
Sbjct: 458 MTIIQ-KCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMIS 516
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
++ P ST+++I+ E+G + + + R N + I++L G K
Sbjct: 517 NNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQK 576
Query: 246 AFEIVELLYKKG 257
A ++ + +KG
Sbjct: 577 ALQVFLEMVEKG 588
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 30/224 (13%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADS--ASYSILIRNLCQ 58
MK DG + + TF+T+I CS G +++ + E M+ + + + Y+ +I L +
Sbjct: 374 MKTDG-INRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFK 432
Query: 59 RGDYDKAE-------KLFDELFEKEIVL---CKFGSQ----------------PLAASYK 92
+ +D+A KLF ++ + + CK G+ P Y
Sbjct: 433 QNRFDEASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYN 492
Query: 93 PIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMTVIMGHCREGAYENGYELLIWMLRR 151
+ +HG R+A ++ +++ S + +I C +G E+ + + + R
Sbjct: 493 SLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITAR 552
Query: 152 DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
+P+ E Y LID +K A++ +M++ LP W
Sbjct: 553 GCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQCIW 596
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 147/329 (44%), Gaps = 19/329 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +NT+I S C ++EA ++ M + ++ D +YS LI G A L
Sbjct: 176 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 235
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+++ + I +P ++ + C+ GK ++ + V +MK+G + + ++Y +
Sbjct: 236 FNKMILENI-------KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 288
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C + M + PD + Y+ +I+GF + K AM +KM +
Sbjct: 289 LMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKN 348
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+P T+ S++ L + G + ++ M DR + +I + ++ L + DKA
Sbjct: 349 IIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 408
Query: 248 --------EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
++ E L+ KG+ + + ++Q C +G EA LL N D
Sbjct: 409 ALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 468
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGL 325
+IL L + + A L E++ +GL
Sbjct: 469 YEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
GG +PDT ++N +I+ C +DEA+ +F+ M + + +Y+ LI LC+ G
Sbjct: 310 AQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI 369
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA--------ERVLRQI 114
A KL DE+ ++ G P +Y I LC++ + KA ++V +
Sbjct: 370 SYALKLVDEMHDR-------GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDL 422
Query: 115 MKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKP 173
+G D +Y +I G C +G + LL M +PD + Y+ +I +KD+
Sbjct: 423 FVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDEN 482
Query: 174 LLAMETLEKMLKSSYL 189
+A + L +M+ L
Sbjct: 483 DMAEKLLREMIARGLL 498
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+ +L+ +C +++A +F M V D+ SY+I+I C+ D+A
Sbjct: 278 GIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEA 337
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF ++ K I+ P +Y + LC+ GK A +++ ++ RG D ++
Sbjct: 338 MNLFKKMHCKNII-------PNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 390
Query: 125 YMTVIMGHCREGAYENGYELLIW--------MLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
Y +++ C+ + LL + + + DV Y +I GF K A
Sbjct: 391 YSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEA 450
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEK 205
+ L KM + +P T+ I+ L +K
Sbjct: 451 LALLSKMEDNGRIPDAKTYEIIILSLFKK 479
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 148/358 (41%), Gaps = 44/358 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + + T N LI+ G + VF N+ + + + LI+ LC
Sbjct: 90 GIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLC-------- 141
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L SY + LC+ G+ R A ++LR++ + Q + +
Sbjct: 142 ---------------------LKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVM 180
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I C+ ++L M+ PDV Y LI GF K A++ KM+
Sbjct: 181 YNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMI 240
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---G 241
+ P T++ ++ + G E V MM+ + I+ N+ L+ G+
Sbjct: 241 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV---VTYCSLMDGYCLVK 297
Query: 242 HRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDL 296
+KA I + + G + ++ CK K+ EA LF + N+ ++
Sbjct: 298 QVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMN--LFKKMHCKNIIPNVVT 355
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA-AFISK 353
++I GLC+ ++ A L E+ ++G+ ++ + ++ AL +V++A A ++K
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 413
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 161/371 (43%), Gaps = 16/371 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ T T++ C G + +A+ +N+ + D Y LI LC+ G A
Sbjct: 106 GYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDA 165
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L E+ E ++V +P Y I C+ T KA + +I+ G D L+
Sbjct: 166 FQLLQEM-EGQVV------KPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 218
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G CR G + +L+ M+ ++ P+V ++ LID F +K K + A M+
Sbjct: 219 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 278
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T++++++ G E+ ++ + +R I ++ T I D
Sbjct: 279 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 338
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHN--VDIDLCNA 299
+A + + K + I ++ LCK G++ A + LFS N+ ++ N
Sbjct: 339 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWE--LFSTINNDGPPPNVITYNI 396
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
+I C+I + L + KGL + N L+ ++ EA + + +
Sbjct: 397 LIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS-K 455
Query: 360 NLDRSVLSYSS 370
NL ++Y+S
Sbjct: 456 NLAPDSITYNS 466
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFNTLI HC GN+ EA K+F+ + + D SY+ILI C+ D+A
Sbjct: 281 GQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEA 340
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF+E+ K +VL Y + LC+ G+ A + I G + ++
Sbjct: 341 VSLFNEMRCKNMVL-------DIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVIT 393
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I C+ + G EL M + P V Y+ LI+G+ + + AM L M
Sbjct: 394 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 453
Query: 185 KSSYLPKTSTWHSILARLLEKG 206
+ P + T++S+ L + G
Sbjct: 454 SKNLAPDSITYNSLFDGLCKSG 475
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 11/344 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P FNT+I S + A+ + + M VT + SI I C G+ A
Sbjct: 39 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFA--- 95
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
F ++ K G QP + + + LC +G+ +KA + +G D + Y T
Sbjct: 96 ----FSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGT 151
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ G + ++LL M + P++ IY+ +ID F + + A + K++
Sbjct: 152 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 211
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ S++ G E ++ M+++NI N+ I+ G +A
Sbjct: 212 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 271
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ L+ K+G V ++ C G + EARKL + D+ +I+G
Sbjct: 272 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 331
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ R+ EA L E+ K + ++ + L+ L G++ A
Sbjct: 332 CKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 375
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 128/314 (40%), Gaps = 40/314 (12%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+ +LI C G E ++ M N + + ++++LI C++G
Sbjct: 209 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 268
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDP 122
+A+ +F+ ++ K G QP ++ + C HG +A ++ + +RG D
Sbjct: 269 EAQGMFN-------LMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 321
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
SY +I+G+C+ + L M ++ + D+ +Y LIDG + + A E
Sbjct: 322 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 381
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ P T++ ++ + Q+I++ + +L+ G G
Sbjct: 382 INNDGPPPNVITYNILIDAFCK-------------------IQDIDMGIELFKLMCGKGL 422
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
L+ G+ CK ++ EA LL + D N++
Sbjct: 423 TPTVLTYNILI--NGY-----------CKSKRIREAMNLLSVMQSKNLAPDSITYNSLFD 469
Query: 303 GLCEINRVLEAFGL 316
GLC+ R+ +A+ L
Sbjct: 470 GLCKSGRISDAWEL 483
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 8/252 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+P+ TFN LI + C G + EA +F M D +++ LI C G+ +A
Sbjct: 247 INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 306
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSY 125
KLFD +FE+ I+ P SY + C+ + +A + ++ K D + Y
Sbjct: 307 KLFDTVFERGIL-------PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLY 359
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I G C+ G +EL + P+V Y+ LID F + + +E + M
Sbjct: 360 SSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCG 419
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T++ ++ + E+ + +M +N+ + + L G
Sbjct: 420 KGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISD 479
Query: 246 AFEIVELLYKKG 257
A+E+ ++++ G
Sbjct: 480 AWELFKVMHVGG 491
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 168/385 (43%), Gaps = 50/385 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ ++ TLI+ +CS G + +A+KVF+ M + +S +YS+LIR + D++
Sbjct: 140 GHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESG 199
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
+L +L+E+ + + A++ + LC+ G + + ++M G+ P +
Sbjct: 200 RELMCKLWERMKMEDELSVN--VAAFANLIDSLCKEGFFNEVFEI-AELMPCGSSLPEQV 256
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y +I C+ G Y ++ M +R F+P Y+ +I G + + + LE
Sbjct: 257 VYGQMIDSFCKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLE-- 314
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
E A + + + + + +++
Sbjct: 315 --------------------------EGAEFGFSLCEHTYKVLVEALCRVLDV------- 341
Query: 244 DKAFEIVEL-LYKKGF-CVKIEEV-VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
DKA E+++L LYK+G +I + ++ LC E +L+F L++H D+ N V
Sbjct: 342 DKAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITLNTV 401
Query: 301 ILGLCEINRVLEAFGLCYE-LVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
I G C++ R EA + + L+ K ++ L++ L KV+EA + R+
Sbjct: 402 INGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVMPEN 461
Query: 360 NLDRSVLSYSS------KKSRPNKA 378
L V++Y+ K RPN A
Sbjct: 462 GLKPGVVTYNVLIRCLYKLKRPNDA 486
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 138/338 (40%), Gaps = 13/338 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P+ + +I S C G A ++ M+ + SY+ +I L + GD +
Sbjct: 249 GSSLPEQVVYGQMIDSFCKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMR 308
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPL 123
+L +E E LC+ +YK + + LC KA VL+ ++ K G
Sbjct: 309 GYQLLEEGAEFGFSLCE-------HTYKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTR 361
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y + C +L++ML DV + +I+GF + + A++ L M
Sbjct: 362 IYNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDM 421
Query: 184 LKSSYL-PKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHG 241
L + P T+ ++++ LL+ E+ + +M + ++ + I L+
Sbjct: 422 LLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLK 481
Query: 242 HRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+ AFE+ + G +V+ LC+ ++ EA+ + D +
Sbjct: 482 RPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIHDNFVYA 541
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
A++ GLC + EA YELV+ G+ + N L+
Sbjct: 542 AILKGLCSSGKFNEACHFLYELVDSGISPNIYSYNILI 579
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 13/325 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F P ++N +IH G+ ++ E F + +Y +L+ LC+ D DKA
Sbjct: 286 FVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLDVDKAR 345
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
++ + KE V Y + LC + VL +++ Q D ++
Sbjct: 346 EVLKLMLYKEGV-------DKTRIYNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITL 398
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFL-PDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
TVI G C+ G ++ ++L ML F PDV + LI G L +K A++ +++
Sbjct: 399 NTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVM 458
Query: 185 KSSYLPKTSTWHSILARLLEK-GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ L +++L R L K P+++ V M I + T +E L
Sbjct: 459 PENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQI 518
Query: 244 DKAFEIVE-LLYKKGFCVKI--EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++A + +++ G +++ LC GK EA L + + + +I N +
Sbjct: 519 EEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSGISPNIYSYNIL 578
Query: 301 ILGLCEINRVLEAFGLCYELVEKGL 325
I C + E + + E+ + G+
Sbjct: 579 INCACNLGLKREVYQIVREMNKNGV 603
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P T+N LI ++A +VF NM +T DS +Y++++ LC+ +
Sbjct: 460 ENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQIE 519
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A+ + + + F Y I + LC GK +A L +++ G + +
Sbjct: 520 EAKSFWQSVIWPSGIHDNF-------VYAAILKGLCSSGKFNEACHFLYELVDSGISPNI 572
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCL 163
SY +I C G Y+++ M + PD + L
Sbjct: 573 YSYNILINCACNLGLKREVYQIVREMNKNGVAPDCVTWRIL 613
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 161/371 (43%), Gaps = 16/371 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ T T++ C G + +A+ +N+ + D Y LI LC+ G A
Sbjct: 122 GYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDA 181
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L E+ E ++V +P Y I C+ T KA + +I+ G D L+
Sbjct: 182 FQLLQEM-EGQVV------KPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 234
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G CR G + +L+ M+ ++ P+V ++ LID F +K K + A M+
Sbjct: 235 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 294
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T++++++ G E+ ++ + +R I ++ T I D
Sbjct: 295 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 354
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHN--VDIDLCNA 299
+A + + K + I ++ LCK G++ A + LFS N+ ++ N
Sbjct: 355 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWE--LFSTINNDGPPPNVITYNI 412
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
+I C+I + L + KGL + N L+ ++ EA + + +
Sbjct: 413 LIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS-K 471
Query: 360 NLDRSVLSYSS 370
NL ++Y+S
Sbjct: 472 NLAPDSITYNS 482
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFNTLI HC GN+ EA K+F+ + + D SY+ILI C+ D+A
Sbjct: 297 GQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEA 356
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF+E+ K +VL Y + LC+ G+ A + I G + ++
Sbjct: 357 VSLFNEMRCKNMVL-------DIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVIT 409
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I C+ + G EL M + P V Y+ LI+G+ + + AM L M
Sbjct: 410 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 469
Query: 185 KSSYLPKTSTWHSILARLLEKG 206
+ P + T++S+ L + G
Sbjct: 470 SKNLAPDSITYNSLFDGLCKSG 491
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 11/344 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P FNT+I S + A+ + + M VT + SI I C G+ A
Sbjct: 55 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFA--- 111
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
F ++ K G QP + + + LC +G+ +KA + +G D + Y T
Sbjct: 112 ----FSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGT 167
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ G + ++LL M + P++ IY+ +ID F + + A + K++
Sbjct: 168 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 227
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ S++ G E ++ M+++NI N+ I+ G +A
Sbjct: 228 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 287
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ L+ K+G V ++ C G + EARKL + D+ +I+G
Sbjct: 288 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 347
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ R+ EA L E+ K + ++ + L+ L G++ A
Sbjct: 348 CKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 391
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 128/314 (40%), Gaps = 40/314 (12%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+ +LI C G E ++ M N + + ++++LI C++G
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDP 122
+A+ +F+ ++ K G QP ++ + C HG +A ++ + +RG D
Sbjct: 285 EAQGMFN-------LMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 337
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
SY +I+G+C+ + L M ++ + D+ +Y LIDG + + A E
Sbjct: 338 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 397
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ P T++ ++ + Q+I++ + +L+ G G
Sbjct: 398 INNDGPPPNVITYNILIDAFCKI-------------------QDIDMGIELFKLMCGKGL 438
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
L+ G+ CK ++ EA LL + D N++
Sbjct: 439 TPTVLTYNILI--NGY-----------CKSKRIREAMNLLSVMQSKNLAPDSITYNSLFD 485
Query: 303 GLCEINRVLEAFGL 316
GLC+ R+ +A+ L
Sbjct: 486 GLCKSGRISDAWEL 499
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 8/251 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LI + C G + EA +F M D +++ LI C G+ +A K
Sbjct: 264 NPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARK 323
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYM 126
LFD +FE+ I+ P SY + C+ + +A + ++ K D + Y
Sbjct: 324 LFDTVFERGIL-------PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYS 376
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++I G C+ G +EL + P+V Y+ LID F + + +E + M
Sbjct: 377 SLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGK 436
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T++ ++ + E+ + +M +N+ + + L G A
Sbjct: 437 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDA 496
Query: 247 FEIVELLYKKG 257
+E+ ++++ G
Sbjct: 497 WELFKVMHVGG 507
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 161/371 (43%), Gaps = 16/371 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ T T++ C G + +A+ +N+ + D Y LI LC+ G A
Sbjct: 122 GYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDA 181
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L E+ E ++V +P Y I C+ T KA + +I+ G D L+
Sbjct: 182 FQLLQEM-EGQVV------KPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 234
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I G CR G + +L+ M+ ++ P+V ++ LID F +K K + A M+
Sbjct: 235 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 294
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K P T++++++ G E+ ++ + +R I ++ T I D
Sbjct: 295 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 354
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHN--VDIDLCNA 299
+A + + K + I ++ LCK G++ A + LFS N+ ++ N
Sbjct: 355 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWE--LFSTINNDGPPPNVITYNI 412
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
+I C+I + L + KGL + N L+ ++ EA + + +
Sbjct: 413 LIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS-K 471
Query: 360 NLDRSVLSYSS 370
NL ++Y+S
Sbjct: 472 NLAPDSITYNS 482
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TFNTLI HC GN+ EA K+F+ + + D SY+ILI C+ D+A
Sbjct: 297 GQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEA 356
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF+E+ K +VL Y + LC+ G+ A + I G + ++
Sbjct: 357 VSLFNEMRCKNMVL-------DIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVIT 409
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I C+ + G EL M + P V Y+ LI+G+ + + AM L M
Sbjct: 410 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 469
Query: 185 KSSYLPKTSTWHSILARLLEKG 206
+ P + T++S+ L + G
Sbjct: 470 SKNLAPDSITYNSLFDGLCKSG 491
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 11/344 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P FNT+I S + A+ + + M VT + SI I C G+ A
Sbjct: 55 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFA--- 111
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
F ++ K G QP + + + LC +G+ +KA + +G D + Y T
Sbjct: 112 ----FSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGT 167
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ G + ++LL M + P++ IY+ +ID F + + A + K++
Sbjct: 168 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 227
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ S++ G E ++ M+++NI N+ I+ G +A
Sbjct: 228 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 287
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ L+ K+G V ++ C G + EARKL + D+ +I+G
Sbjct: 288 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 347
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ R+ EA L E+ K + ++ + L+ L G++ A
Sbjct: 348 CKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 391
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 128/314 (40%), Gaps = 40/314 (12%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+ +LI C G E ++ M N + + ++++LI C++G
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDP 122
+A+ +F+ ++ K G QP ++ + C HG +A ++ + +RG D
Sbjct: 285 EAQGMFN-------LMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 337
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
SY +I+G+C+ + L M ++ + D+ +Y LIDG + + A E
Sbjct: 338 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 397
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ P T++ ++ + Q+I++ + +L+ G G
Sbjct: 398 INNDGPPPNVITYNILIDAFCKI-------------------QDIDMGIELFKLMCGKGL 438
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
L+ G+ CK ++ EA LL + D N++
Sbjct: 439 TPTVLTYNILI--NGY-----------CKSKRIREAMNLLSVMQSKNLAPDSITYNSLFD 485
Query: 303 GLCEINRVLEAFGL 316
GLC+ R+ +A+ L
Sbjct: 486 GLCKSGRISDAWEL 499
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 8/251 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LI + C G + EA +F M D +++ LI C G+ +A K
Sbjct: 264 NPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARK 323
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYM 126
LFD +FE+ I+ P SY + C+ + +A + ++ K D + Y
Sbjct: 324 LFDTVFERGIL-------PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYS 376
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++I G C+ G +EL + P+V Y+ LID F + + +E + M
Sbjct: 377 SLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGK 436
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T++ ++ + E+ + +M +N+ + + L G A
Sbjct: 437 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDA 496
Query: 247 FEIVELLYKKG 257
+E+ ++++ G
Sbjct: 497 WELFKVMHVGG 507
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 28/288 (9%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F PD + +L+H C AG++ +A +VF +MK V + +YSI+I +LC+ G +A
Sbjct: 243 FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAH 302
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSY 125
+F E+ + G P A ++ + + + G+T K +V Q+ + G D +SY
Sbjct: 303 DVFSEMIDA-------GCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISY 355
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I HC++ + ++L M+++ P+ ++ + + A KM +
Sbjct: 356 NFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKE 415
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+P T T++ ++ + ++ M + + N+N I + GH +
Sbjct: 416 LKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNN 475
Query: 246 AFE--------------------IVELLYKKGFCVKIEEVVQFLCKRG 273
A+ ++ELL G K EE+V+ + RG
Sbjct: 476 AYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARG 523
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ TFN+L+ H AG ++ L+V+ MK AD+ SY+ LI + C+ + D
Sbjct: 310 DAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLD 369
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+A K+ D + +K G P A+++ IF + E A R+ +
Sbjct: 370 EAVKVLDTMVKK-------GVAPNASTFNSIFGCIAELHDVNGAHRMYAK---------- 412
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
M +P+ Y+ L+ F + ++ ++M
Sbjct: 413 ------------------------MKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEM 448
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN-IRQNINLSTKSIELLFGHGH 242
+S P +T+ ++ EKG + + + M++ ++ N+++ +ELL G
Sbjct: 449 DESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQ 508
Query: 243 RDKAFEIVELLYKKGF 258
K E+VE + +GF
Sbjct: 509 LKKHEELVEKMVARGF 524
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 30/221 (13%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
TF+ L+ + AG EA+ F M+++ D S+SI+I +LC++ +AE FD L
Sbjct: 180 TFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSL 239
Query: 73 ---FEKEIVL--------CKFGS----------------QPLAASYKPIFQYLCEHGKTR 105
FE ++++ C+ G +P +Y + LC G+
Sbjct: 240 KHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQIT 299
Query: 106 KAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCL 163
+A V +++ G DP +++ +++ H + G E ++ M R D Y+ L
Sbjct: 300 RAHDVFSEMIDAGC-DPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFL 358
Query: 164 IDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLE 204
I+ + + A++ L+ M+K P ST++SI + E
Sbjct: 359 IESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAE 399
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 7/201 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF +N +I + D A + + MK+ V +++S+L+R + G +A
Sbjct: 138 GFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEA 197
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
F+ + + +G +P S+ + LC+ + +AE + + D + Y
Sbjct: 198 VHAFNRMED-------YGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEPDVIVY 250
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+++ G CR G E+ M P+V Y +ID + + A + +M+
Sbjct: 251 TSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMID 310
Query: 186 SSYLPKTSTWHSILARLLEKG 206
+ P T++S++ ++ G
Sbjct: 311 AGCDPNAVTFNSLMRVHVKAG 331
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 11/279 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP TF+ LI+ C G L EA + M + D +++IL+ LC+ GD A+
Sbjct: 233 SPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVDALCKEGDVKGAKS 292
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
+V+ K G P +Y I C + KA+ +L I + G SY
Sbjct: 293 FL-------VVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYS 345
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C+ + L M R P+ Y LIDG + + A E +++M +
Sbjct: 346 IMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVN 405
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T+ S++ L + ++ + + D+ I+ ++ I+ L G A
Sbjct: 406 GQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNA 465
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
++ + L KG+ + I ++ LCK G +A LL
Sbjct: 466 QDVFQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALL 504
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P +++ +I+ C +DEAL +F M+ + ++ +YS LI LC+ G + A
Sbjct: 336 GVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCA 395
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L DE+ G P +Y + LC++ KA ++++I +G Q D +
Sbjct: 396 WELVDEMHVN-------GQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYT 448
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+ G +N ++ +L + + ++ Y+ LI+G + A L KM
Sbjct: 449 YNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALLSKMK 508
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+ +P T+ +I+ L K ++ ++ ML R +
Sbjct: 509 GNDVIPDAVTYETIIHSLFYKDENEKAEKLLREMLGRGL 547
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 161/385 (41%), Gaps = 52/385 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ + + LI+ +C G + A + + ++ +++ L++ LC G ++A
Sbjct: 91 GIKPNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEA 150
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLS 124
D + G +Y + LC+ GKT++A +VLR+I K + +
Sbjct: 151 IHFHDHVLA-------LGFHLDQVTYGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVM 203
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y TVI C++ + YEL M+ + P V + LI GF + A + +M+
Sbjct: 204 YNTVIDSLCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMV 263
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH---G 241
+ P T++ ++ L ++G + V+M+ + ++ ++ SI + GH
Sbjct: 264 LKNINPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDV-VTYNSI--MDGHCLVN 320
Query: 242 HRDKAFEIVELLYK--------------KGFC------------------------VKIE 263
+KA ++ ++ + GFC V
Sbjct: 321 EVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYS 380
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEK 323
++ LCK G+ A +L+ N +I +++I LC+ N + +A L ++ ++
Sbjct: 381 SLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQ 440
Query: 324 GLHQELTCLNDLVTALEARGKVEEA 348
G+ ++ N L+ L G+++ A
Sbjct: 441 GIQPDMYTYNILIDGLCKGGRLKNA 465
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+N LI C G L A VF+++ + + SY+ILI LC+ G +D
Sbjct: 439 DQGIQPDMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRSYNILINGLCKDGLFD 498
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
KAE L ++ +++ P A +Y+ I L + KAE++LR+++ RG
Sbjct: 499 KAEALLSKMKGNDVI-------PDAVTYETIIHSLFYKDENEKAEKLLREMLGRG 546
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+++LI + C +LD+A+ + + +K+ + D +Y+ILI LC+ G A
Sbjct: 406 GQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNA 465
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
+ +F +L K G SY + LC+ G KAE +L ++ D ++
Sbjct: 466 QDVFQDLLTK-------GYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIPDAVT 518
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFL 154
Y T+I + E +LL ML R L
Sbjct: 519 YETIIHSLFYKDENEKAEKLLREMLGRGLL 548
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 140/320 (43%), Gaps = 11/320 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ + +I C +++A ++ M ++ D +Y+ LI C G A L
Sbjct: 203 PNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGL 262
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++ + I P + + C+ GK ++A+ V+ +MK G + + ++Y +
Sbjct: 263 LHKMILENI-------NPNVYTMSILVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNS 315
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G+C +L M +R + DV+ Y +I+GF + A++ ++M
Sbjct: 316 LIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQ 375
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+P T T+ S++ L + G ++ + M DR + NI + L + H DKA
Sbjct: 376 LVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAI 435
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ +G +++ LC G+L +A+ + L +N+D+ A+I G
Sbjct: 436 ALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKGYNLDVYTYTAMIRGF 495
Query: 305 CEINRVLEAFGLCYELVEKG 324
C EA L ++ + G
Sbjct: 496 CYEGLFDEALALLSKMKDNG 515
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+N+LI +C +++A + M V AD SYSI+I C+ D+A
Sbjct: 305 GVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEA 364
Query: 66 EKLFDELFEKEIV------------LCKF----------------GSQPLAASYKPIFQY 97
LF E+ +++V LCK G QP +Y +
Sbjct: 365 IDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNA 424
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
LC++ KA +LR+ +G Q L +Y +I G C G ++ + +L + + D
Sbjct: 425 LCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKGYNLD 484
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
V Y +I GF + A+ L KM + +P T+ I+ L +K
Sbjct: 485 VYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEIIILSLFKK 533
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 8/182 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PDT T+++LI C +G + +A ++ M + + +Y+ L+ LCQ DKA L
Sbjct: 378 PDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIAL 437
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
+ F+ + G QP +Y + + LC G+ + A+ V + ++ +G D +Y
Sbjct: 438 LRK-FKTQ------GIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKGYNLDVYTYTA 490
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C EG ++ LL M +P+ + Y+ +I +KD+ +A + L +M++
Sbjct: 491 MIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEIIILSLFKKDENDMAEKLLREMIRRG 550
Query: 188 YL 189
L
Sbjct: 551 LL 552
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 145/350 (41%), Gaps = 11/350 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+ T+I C G + EAL + + + SY LI LC+ G+ A
Sbjct: 130 GYEPNVIILTTIIKGLCLKGEVREALHFHDKVVAQGFQLNQVSYGALINGLCKVGETRAA 189
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
+L + K + QP Y I +C+ A + + I KR D ++
Sbjct: 190 LELLRRVDGKIV-------QPNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPDVVT 242
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C G ++ LL M+ + P+V L+D F + KP A + ++
Sbjct: 243 YNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGKPKEAKAVVAVLM 302
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K+ P T++S++ +++ + M R + ++ + I D
Sbjct: 303 KNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVD 362
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A ++ + + + + ++ LCK G++ +A +L+ +I N+++
Sbjct: 363 EAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLL 422
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
LC+ + V +A L + +G+ L L+ L G++++A +
Sbjct: 423 NALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVV 472
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 143/344 (41%), Gaps = 11/344 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P F ++ S A + A+ + M+ V ++ + SILI C G + +
Sbjct: 63 PPIFHFGVMLGSLVKANHYTTAVSLHRKMELNGVASNLITMSILINCFCHLGQNPLSFSV 122
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F ++ K G +P I + LC G+ R+A +++ +G Q + +SY
Sbjct: 123 FAKIL-------KMGYEPNVIILTTIIKGLCLKGEVREALHFHDKVVAQGFQLNQVSYGA 175
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ G ELL + + P+V +Y +IDG + A +M+
Sbjct: 176 LINGLCKVGETRAALELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKR 235
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T++++++ G ++ + M+ NI N+ + ++ G +A
Sbjct: 236 IFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGKPKEAK 295
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+V +L K G V ++ C ++ +A +L + D+ + +I G
Sbjct: 296 AVVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGF 355
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+I V EA L E+ + L + + L+ L G++ +A
Sbjct: 356 CKIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDA 399
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N+L+++ C ++D+A+ + K + +Y+ILI+ LC G
Sbjct: 408 DRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLK 467
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A+ +F +L K G +Y + + C G +A +L ++ G +
Sbjct: 468 DAQVVFQDLLIK-------GYNLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNA 520
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
+Y +I+ ++ + +LL M+RR L
Sbjct: 521 KTYEIIILSLFKKDENDMAEKLLREMIRRGLL 552
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT ++N L+ + C G++ A +F M V D SY IL++ LC++ + A
Sbjct: 177 GVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGA 236
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF+++ K V P + +Y + LC K R+A ++L ++ +G D +
Sbjct: 237 VDLFEDMLNKGFV-------PDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 289
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y TVI+G CREG + +++ M LP++ Y L++G A + +E+ML
Sbjct: 290 YNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEML 349
Query: 185 KSSYLPKTSTWHSILARLLEKGF 207
+ P + H+++ KGF
Sbjct: 350 SKGFSPHFAVIHALV-----KGF 367
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 27 LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQP 86
L A +F++ V D+ SY+IL+R C GD A LF+++F++++V P
Sbjct: 163 LRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVV-------P 215
Query: 87 LAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELL 145
SY+ + Q LC + A + ++ +G D +Y T++ CR+ Y+LL
Sbjct: 216 DIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLL 275
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
M + PD+ Y+ +I GF ++ + A + ++ M + LP ++ +++ L
Sbjct: 276 CRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHL 335
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEV 265
G MLD +TK +E + G + F V I +
Sbjct: 336 G-----------MLDE--------ATKYVEEMLSKG------------FSPHFAV-IHAL 363
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVE 322
V+ C G++ EA +L SL++ D ++ +CE++ ++ G+ E+++
Sbjct: 364 VKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDDGVKIDGVLEEVLK 420
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 8/272 (2%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G+ PD + T+I C G L EA K++ M + + +Y+++I C+ D+
Sbjct: 299 DRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFA 358
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A KL+D+ +C G SY + L HGKT +A + ++ ++G +D
Sbjct: 359 EARKLYDD-------MCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDL 411
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY ++I G C+EG LL +L + P V + LI + AM L+
Sbjct: 412 ISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKD 471
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M P ST ++ L +KG + + ML ++ N+ I+ L
Sbjct: 472 MHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENR 531
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGK 274
D +++L++++G+ ++ + + K K
Sbjct: 532 LDDILIVLDLMFREGYRLEKSRICSLVTKFSK 563
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 12/206 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G++ + +++T+I G DEAL +F M + D SY+ LI+ LCQ G+ KA
Sbjct: 371 GYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKA 430
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
L ++L + G +P +S+ P+ + LC+ G T A R+L+ + R + S
Sbjct: 431 TNLLNKLLIQ-------GLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIAST 483
Query: 125 --YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
YM I+G ++G + G E L+ ML P+++ ++ LID ++++ + L+
Sbjct: 484 HDYM--IIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDL 541
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFP 208
M + Y + S S++ + +K FP
Sbjct: 542 MFREGYRLEKSRICSLVTKFSKKNFP 567
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 160/370 (43%), Gaps = 17/370 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD + N L + AG + A + E +F DS +R L + G
Sbjct: 92 GFKPDQSSCNALFDALVDAGAVKAAKSLLE-YPDFVPKNDSLEG--YVRLLGENG----- 143
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+ +E+F+ + L K G P A+S+ + G+T ++ +++ G +
Sbjct: 144 --MVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDV 201
Query: 126 MTV---IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
TV I C E NGYELL +L + D +++ LI+GF ++ + E L
Sbjct: 202 ETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHI 261
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M+ P T+ I+ LL++ E+ RV + DR + + T I+ G
Sbjct: 262 MIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGL 321
Query: 243 RDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
+A ++ + +KG ++ CK EARKL + ++ +
Sbjct: 322 LAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYST 381
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE 359
+I GL + EA L +E+ KG+ ++L N L+ L G++ +A + ++ ++
Sbjct: 382 MISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLL-IQ 440
Query: 360 NLDRSVLSYS 369
L+ SV S++
Sbjct: 441 GLEPSVSSFT 450
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 146/333 (43%), Gaps = 19/333 (5%)
Query: 25 GNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGS 84
G ++E VF ++K ++S+++ + + G D KL++ + E + G
Sbjct: 143 GMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGV-----GV 197
Query: 85 QPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYE 143
+ + + C K +LRQ++++G D + +I G C++ Y+ E
Sbjct: 198 NIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSE 257
Query: 144 LLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLL 203
+L M+ P + Y +I+G L++ K A + Y P + +++
Sbjct: 258 ILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFC 317
Query: 204 EKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH-RD--KAFEIVELLYKKGFC- 259
+ G E+ ++ M+ + + N T ++ +++G+ RD +A ++ + + +G+
Sbjct: 318 DMGLLAEARKLWFEMIQKGLVPN--EYTYNV-MIYGYCKVRDFAEARKLYDDMCGRGYAE 374
Query: 260 --VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAVILGLCEINRVLEAFG 315
V ++ L GK EA L LF + + DL N++I GLC+ + +A
Sbjct: 375 NVVSYSTMISGLYLHGKTDEA--LSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATN 432
Query: 316 LCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
L +L+ +GL ++ L+ L G E A
Sbjct: 433 LLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGA 465
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 153/359 (42%), Gaps = 15/359 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP+ + TLI C G++ A K+F MK + A+ +YS+LI ++G +
Sbjct: 194 GLSPNVVIYTTLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEG 253
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++++ + IV P +Y + C G KA V ++ ++ ++
Sbjct: 254 FQMYESMKLSGIV-------PNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMT 306
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G CR +L + R P++ Y+ LI G+ +K A+ ++
Sbjct: 307 YNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELK 366
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+++++A + G + + M +RNI T + + +
Sbjct: 367 SNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFVRINYME 426
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDID--LCNA 299
KAFEI L+ K G + ++ LC G + EA K LF + N++ + + +
Sbjct: 427 KAFEIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASK--LFKSLDELNMEPNSVIYDT 484
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGL 358
+I G C+ A L E++ KG+ + + L K++EA + + + L
Sbjct: 485 LIHGYCKEGNCYRALRLLNEMIGKGMVPNVASFCSTIGLLCKDEKLKEAEVVLQHMVNL 543
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 143/382 (37%), Gaps = 40/382 (10%)
Query: 7 FSPDTC--------TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQ 58
F P TC + + +++ S+G +A V + + QVT+ S+S L+ L Q
Sbjct: 26 FIPSTCQGLQHTSQSVSFILNRLLSSGLQSQAQSVLVRVISGQVTSSMFSHSSLMEELTQ 85
Query: 59 ----------------------RGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQ 96
D+A E+ K G P++ ++ +
Sbjct: 86 THFTSSSTCSLLYEAIVNAYVHSQSPDEALYFLHEMIHK-------GHAPISNTFNNLLN 138
Query: 97 YLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
L +A V ++ + D S+ +I G C G ++LL M + P+
Sbjct: 139 LLIRSNSFCRAWLVFDELKNKVVLDVYSFGIMIKGCCEAGDLMKSFQLLGMMEKTGLSPN 198
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
V IY LIDG + LA + KM + T+ ++ ++G E ++
Sbjct: 199 VVIYTTLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGFQMYE 258
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRG 273
M I N+ + I G DKAF + + + +K I ++ LC+
Sbjct: 259 SMKLSGIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLCRMK 318
Query: 274 KLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLN 333
KL EA KL + +I N +I G C+ ++ A L EL GL + N
Sbjct: 319 KLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYN 378
Query: 334 DLVTALEARGKVEEAAFISKRI 355
L+ G + A + K +
Sbjct: 379 TLIAGYSKVGNLAGALNLVKEM 400
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 39/345 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD L+ CS G +D A ++ + + V + Y+ LI + G D
Sbjct: 178 DSGLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNALIHGFYKMGKKD 237
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
KAE + + K G P +Y + Y C+ +AER++ + + G D
Sbjct: 238 KAEAI-------RGFMSKNGCAPDLVTYNILLNYGCDEVTVDEAERLVETMERSGMADLY 290
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY ++ C+ + Y ++ ++ + D Y+ +I F + + A E E+M
Sbjct: 291 SYNELLKAFCKAYQVDRAYLYMVNKMQSKGVCDAVSYNTIIVAFCKVRRTERAYELYEEM 350
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ P T+ ++ L KG + + ++ V M I ++ T ++ G+
Sbjct: 351 CRKGIQPDVVTFTVLIKAFLRKGGSNVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNI 410
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
DKA+ + FC +E N + D+ NA+I G
Sbjct: 411 DKAYGV--------FCDMVE------------------------NGVSPDVVSYNAIING 438
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
C+ +RV+ A+ L E+ KGL + N +V L K+ EA
Sbjct: 439 FCKASRVMGAWRLYEEMQVKGLDPDEVTFNLIVGVLIQGNKISEA 483
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 137/321 (42%), Gaps = 11/321 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+N LI + L+ A+ +F MK + + +++IL+ C+ G + A+ +
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMT 127
+ + +I +P +Y + C K KA+ + + G + Y T
Sbjct: 294 LAIMMKDDI-------KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G C+ + L M R +P+V Y LIDG + + A++ +++M
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ SIL L + ++ + + D+ IR ++ T I+ L G + A
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ E L KG+ + + ++Q C +G +A LL N + VIL L
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL 526
Query: 305 CEINRVLEAFGLCYELVEKGL 325
E + A L E++ +GL
Sbjct: 527 FEKDENDTAEKLLREMIVRGL 547
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
GG + + T+++ C +DEA+ +FE M+ ++ + +YS LI LC+ G
Sbjct: 333 ASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRI 392
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
A KL DE+ ++ G P +Y I LC++ KA +L + +G + D
Sbjct: 393 FYALKLVDEMHDR-------GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y +I G C+ G E+ + +L + + DV Y +I GF K A+ L
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLS 505
Query: 182 KMLKSSYLPKTSTWHSILARLLEK 205
KM + +P T+ ++ L EK
Sbjct: 506 KMEDNGCIPNAKTYELVILSLFEK 529
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 153/350 (43%), Gaps = 15/350 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSASYSILIRNLCQRGDY 62
G D TFN LI+ G + +F + K + TA +++ LI+ LC +G
Sbjct: 90 NGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTA--ITFNTLIKGLCLKGHI 147
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
+A D++ + G SY + LC+ G+ A ++L+++ + Q +
Sbjct: 148 HQALHFHDKVVAQ-------GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPN 200
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+ Y +I C+ + ++L M+ + PDV Y+ LI GF K A++
Sbjct: 201 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFN 260
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
KM K + P T++ ++ ++G +++ V +M+ +I+ ++ ++
Sbjct: 261 KMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSIN 320
Query: 242 HRDKAFEIVELLYKKGFCVKIE---EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+KA +I + + G ++ +V CK + EA L ++ +
Sbjct: 321 KVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYS 380
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++I GLC++ R+ A L E+ ++G + + ++ AL V++A
Sbjct: 381 SLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKA 430
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+++++ + C ++D+A+ + N+K+ + D +Y+ILI+ LCQ G +
Sbjct: 404 DRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLE 463
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ +F++L K G +Y + Q C+ G KA +L ++ G +
Sbjct: 464 DAQNVFEDLLVK-------GYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNA 516
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
+Y VI+ + + +LL M+ R L
Sbjct: 517 KTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 137/321 (42%), Gaps = 11/321 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+N LI + L+ A+ +F MK + + +++IL+ C+ G + A+ +
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMT 127
+ + +I +P +Y + C K KA+ + + G + Y T
Sbjct: 294 LAIMMKDDI-------KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G C+ + L M R +P+V Y LIDG + + A++ +++M
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ SIL L + ++ + + D+ IR ++ T I+ L G + A
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ E L KG+ + + ++Q C +G +A LL N + VIL L
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL 526
Query: 305 CEINRVLEAFGLCYELVEKGL 325
E + A L E++ +GL
Sbjct: 527 FEKDENDTAEKLLREMIVRGL 547
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
GG + + T+++ C +DEA+ +FE M+ ++ + +YS LI LC+ G
Sbjct: 333 ASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRI 392
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
A KL DE+ ++ G P +Y I LC++ KA +L + +G + D
Sbjct: 393 FYALKLVDEMHDR-------GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y +I G C+ G E+ + +L + + DV Y +I GF K A+ L
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLS 505
Query: 182 KMLKSSYLPKTSTWHSILARLLEK 205
KM + +P T+ ++ L EK
Sbjct: 506 KMEDNGCIPNAKTYELVILSLFEK 529
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 153/350 (43%), Gaps = 15/350 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSASYSILIRNLCQRGDY 62
G D TFN LI+ G + +F + K + TA +++ LI+ LC +G
Sbjct: 90 NGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTA--ITFNTLIKGLCLKGHI 147
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-D 121
+A D++ + G SY + LC+ G+ A ++L+++ + Q +
Sbjct: 148 HQALHFHDKVVAQ-------GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPN 200
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+ Y +I C+ + ++L M+ + PDV Y+ LI GF K A++
Sbjct: 201 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFN 260
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
KM K + P T++ ++ ++G +++ V +M+ +I+ ++ ++
Sbjct: 261 KMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSIN 320
Query: 242 HRDKAFEIVELLYKKGFCVKIE---EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCN 298
+KA +I + + G ++ +V CK + EA L ++ +
Sbjct: 321 KVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYS 380
Query: 299 AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++I GLC++ R+ A L E+ ++G + + ++ AL V++A
Sbjct: 381 SLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKA 430
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+++++ + C ++D+A+ + N+K+ + D +Y+ILI+ LCQ G +
Sbjct: 404 DRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLE 463
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ +F++L K G +Y + Q C+ G KA +L ++ G +
Sbjct: 464 DAQNVFEDLLVK-------GYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNA 516
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
+Y VI+ + + +LL M+ R L
Sbjct: 517 KTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 118/256 (46%), Gaps = 11/256 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T+NTL+ + G L+EA + F MK + D +Y+ ++ G+ ++
Sbjct: 234 GVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRS 293
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+++FD + ++ +V P A+Y + Q LC+ + A V +++ +G L +
Sbjct: 294 KRVFDAMVKEGLV-------PSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTT 346
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y VI G C G E G E + M +P V+ Y+ +I + + + +E EKM
Sbjct: 347 YNVVIRGLCHSGEIERGVEFMKRMEENGCMPSVQTYNVVIRYYCDEGELEKGLELFEKMG 406
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHE---SARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+ LP T++ +++ + + + + ++ + M+ R + + L G
Sbjct: 407 NGTCLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEMVGRGFLPRKFTFNRVLNGLVLTG 466
Query: 242 HRDKAFEIVELLYKKG 257
+R+ A EI+ + + G
Sbjct: 467 NREFANEILRMQSRSG 482
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 14/281 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
P TF L + + G +A+KVF +M D S++ ++ LC+ + A
Sbjct: 131 LGPTPKTFAILAERYATGGKAHKAVKVFLSMHEHGCHQDLNSFNTILDVLCKTKRVEMAN 190
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LS 124
LF L + C + SY + C +T A +VL+++++RG DP ++
Sbjct: 191 NLFKTLRGR--FKCD------SVSYNIMANGWCLIKRTPMALQVLKEMVERGV-DPTMVT 241
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G+ R G +E + M +R DV Y ++ GF + + + M+
Sbjct: 242 YNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRVFDAMV 301
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K +P +T+++++ L +K + V M+ + N+ I L G +
Sbjct: 302 KEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVVIRGLCHSGEIE 361
Query: 245 KAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
+ E ++ + + G ++ V+++ C G+L + +L
Sbjct: 362 RGVEFMKRMEENGCMPSVQTYNVVIRYYCDEGELEKGLELF 402
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 112/254 (44%), Gaps = 8/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ T+++L+ +C +++A +F NM V D SY+ILI C+ D A
Sbjct: 21 GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAA 80
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
LF+E+ ++I+ P +Y + LC+ GK A +++ ++ RG D ++
Sbjct: 81 MNLFEEMHCRKII-------PNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 133
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ C+ + LL + + P++ Y LI+G + +P A E +L
Sbjct: 134 YSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLL 193
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y +T+ ++ G E+ + M + N I LF D
Sbjct: 194 VKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDEND 253
Query: 245 KAFEIVELLYKKGF 258
KA +++ + +G
Sbjct: 254 KAEKLLLEMITRGL 267
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 8/220 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG +PD ++N LI+ C D A+ +FE M ++ + +Y+ LI LC+ G
Sbjct: 55 GGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISY 114
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
A KL DE+ ++ G P +Y + LC++ KA +L ++ +G Q +
Sbjct: 115 ALKLVDEMHDR-------GQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMY 167
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I G C+ G E+ + +L + + +V Y +I F A+ L KM
Sbjct: 168 TYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKM 227
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
++ +P T+ I+ L +K ++ ++ + M+ R +
Sbjct: 228 EENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGL 267
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 13/232 (5%)
Query: 56 LCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM 115
C+ G +A+ +F + +K G +P +Y + C + KA+ + +
Sbjct: 1 FCKEGKVKEAKNVFAAMMKK-------GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMA 53
Query: 116 KRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPL 174
+ G D SY +I G C+ + L M R +P+V Y+ LIDG + K
Sbjct: 54 QGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKIS 113
Query: 175 LAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML-DRNIRQNINLSTKS 233
A++ +++M P T+ S+L L K P + A + L D+ ++ N+ T
Sbjct: 114 YALKLVDEMHDRGQPPDIITYSSLLDALC-KNHPGDKAIALLTKLKDQGLQPNMYTYTIL 172
Query: 234 IELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
I L G + A I E L KG+ + + ++ C G EA +L
Sbjct: 173 INGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAML 224
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+++L+ + C D+A+ + +K+ + + +Y+ILI LC+ G +
Sbjct: 124 DRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPE 183
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ +F++L K G +Y + C +G +A +L ++ + G +
Sbjct: 184 DAQNIFEDLLVK-------GYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNA 236
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y +I + + +LL+ M+ R L
Sbjct: 237 VTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 268
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 162/363 (44%), Gaps = 14/363 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
TFN +I+ C G +A +M+ + V + +Y+ +I C RG ++ A K+F +
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMG 131
+K + +P +Y LC+ + +A VL ++++ G + ++Y +I G
Sbjct: 279 KDKNL-------KPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDG 331
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C +G + + M+ R + V Y+ LI + + A + +++M + P
Sbjct: 332 CCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPD 391
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T++ + G ++ + M+++NIR + T I++ +A E +
Sbjct: 392 VVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFK 451
Query: 252 LLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC-NAVILGLCEI 307
K+G I ++ C G + A +LL + N V ++ N ++ G C
Sbjct: 452 KSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLK-EMDNAKVVPDEVTFNTLMQGYCRE 510
Query: 308 NRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLS 367
+V EA L E+ E+G+ + N L++ RG +++A + + L D ++L+
Sbjct: 511 RKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSL-GFDPTLLT 569
Query: 368 YSS 370
Y++
Sbjct: 570 YNA 572
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 149/347 (42%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+NT+I+ +C G + A K+F+ MK+ + D +Y+ I LC+ ++A
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA 306
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ +L E +V P A +Y + C G KA ++M RG +
Sbjct: 307 SGVLCKLLESGLV-------PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFT 359
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I E E +++ M + PDV Y+ I+G+ + A+ ++M+
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMV 419
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ + P T+ S++ ++ E+ + + +I + I+ +G+ D
Sbjct: 420 EKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNID 479
Query: 245 KAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+AF++++ + V ++Q C+ K+ EA+KLL + D N +I
Sbjct: 480 RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLI 539
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G + + +A + E++ G L N L+ G+ + A
Sbjct: 540 SGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHA 586
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD FN LI HC GN+D A ++ + M N +V D +++ L++ C+ ++A
Sbjct: 457 GMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEA 516
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
+KL DE+ E+ G +P SY + + G + A V +++ G DP L
Sbjct: 517 KKLLDEMKER-------GIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGF-DPTLL 568
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKD 171
+Y +I G+ + G ++ ELL M + PD Y +I+ D
Sbjct: 569 TYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTND 616
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 135/323 (41%), Gaps = 11/323 (3%)
Query: 30 ALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAA 89
A V+E M + + +++I+I LC+ G + KA+ + E+ +G +P
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHM---EV----YGVKPNVV 253
Query: 90 SYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWM 148
+Y + C GK A ++ + + + + D +Y + I C+E E +L +
Sbjct: 254 TYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKL 313
Query: 149 LRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP 208
L +P+ Y+ LIDG K A ++M+ + T++ ++ L +
Sbjct: 314 LESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRI 373
Query: 209 HESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIE---EV 265
E+ + M ++ + ++ I G+ KA + + + +K +E +
Sbjct: 374 EEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSL 433
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
+ KR ++ EA + S+K DI + NA+I G C + AF L E+ +
Sbjct: 434 IDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKV 493
Query: 326 HQELTCLNDLVTALEARGKVEEA 348
+ N L+ KVEEA
Sbjct: 494 VPDEVTFNTLMQGYCRERKVEEA 516
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 3/193 (1%)
Query: 159 IYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
++D L+ + Q KP A+E L M ++ +PKT T +S+L+ LL+ + V M
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208
Query: 219 LDRNIRQNINLSTKSIELLFGHGHRDKAFEIV---ELLYKKGFCVKIEEVVQFLCKRGKL 275
+ NI+ +I I +L G KA + + E+ K V V+ C RGK
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268
Query: 276 PEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDL 335
A K+ + D N+ I LC+ R+ EA G+ +L+E GL N L
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328
Query: 336 VTALEARGKVEEA 348
+ +G +++A
Sbjct: 329 IDGCCNKGDLDKA 341
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 147/347 (42%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+ I + A +D+A +F+ M + D +Y++LI LC G DKA
Sbjct: 265 GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKA 324
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++L+ ++ P +Y + + G +R ++ G D ++
Sbjct: 325 KELYVKMRASS-------HSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVT 377
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I C+ G + +++L M + P++ Y+ +I G L+ + A+E LE M
Sbjct: 378 YTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENME 437
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P ++ + + G P ++ M R I +I S+ L G
Sbjct: 438 SLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRIS 497
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A +I L+K G V +++ K G++ +A +LL + D+ + N++I
Sbjct: 498 EAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLI 557
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
L + RV A+ + L L + N L+T L GK+ +A
Sbjct: 558 NTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKA 604
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 163/379 (43%), Gaps = 28/379 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+ LI + C+AG LD+A +++ M+ + D +Y L+ + GD +
Sbjct: 298 DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLE 357
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
++ ++E+ E + G P +Y + + LC+ G +A +L + +G L
Sbjct: 358 TVKRFWNEM-EVD------GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL 410
Query: 124 -SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y T+I G + + ELL M P Y ID + + P A++T E
Sbjct: 411 HTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET 470
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI------EL 236
M K +P + ++ L L E G E+ + N LS S+ +
Sbjct: 471 MKKRGIMPSIAACNASLYTLAETGRISEAEDIF------NDLHKCGLSPDSVTYNMLMKC 524
Query: 237 LFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL--LFSLKNHHN 291
G DKA +++ + KG + I ++ L K G++ A K+ L +LK
Sbjct: 525 YSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPT 584
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
V N ++ GL + ++L+A L + E G N L+ L V+ A +
Sbjct: 585 VVT--YNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKM 642
Query: 352 SKRIPGLENLDRSVLSYSS 370
R+ + N + VL+Y++
Sbjct: 643 FCRMT-MMNCNPDVLTYNT 660
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 8/196 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G FSP CT+ LI AG ++A+K+FE M ++ +S Y+ILI + G+ D
Sbjct: 895 GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDF 954
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A +LF ++ ++ G +P SY + + LC G+ +A + ++ G D +
Sbjct: 955 ACELFKKMVKE-------GIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTV 1007
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY +I G + + L M R PD+ Y+ LI K +A++ E++
Sbjct: 1008 SYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEEL 1067
Query: 184 LKSSYLPKTSTWHSIL 199
P T+++++
Sbjct: 1068 QLVGLEPSVFTYNALI 1083
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 151/350 (43%), Gaps = 15/350 (4%)
Query: 27 LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQP 86
++EA+ E + V D LI+ LC+R A+ +FD+ F K + G P
Sbjct: 741 IEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDK-FTKNL-----GIHP 794
Query: 87 LAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELL 145
SY + L T KA + + GT + +Y ++ H + Y+L
Sbjct: 795 TLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLY 854
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
M R P+ ++ +I ++ + A++ +++ + P T+ ++ LL+
Sbjct: 855 SEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKA 914
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE- 264
G ++ ++ MLD N + I G D A E+ + + K+G ++
Sbjct: 915 GRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSY 974
Query: 265 --VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAVILGLCEINRVLEAFGLCYEL 320
+V+ LC G++ EA + F +D D N +I GL + R+ EA L E+
Sbjct: 975 TILVECLCITGRIDEAVQ--YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEM 1032
Query: 321 VEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
+G+ +L N L+ L GKV+ A + + + L L+ SV +Y++
Sbjct: 1033 KNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQ-LVGLEPSVFTYNA 1081
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 142/348 (40%), Gaps = 12/348 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + ++N LIH G +EALKV++ M + + +YS L+ L +RGD K
Sbjct: 196 GFILNAYSYNGLIHLLL-PGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKI 254
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
L +E+ K I G +P +Y + L + A + +++ G D ++
Sbjct: 255 MNLLEEM--KSI-----GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVIT 307
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I C G + EL + M PD Y L+D F + +M
Sbjct: 308 YTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEME 367
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y P T+ ++ L + G + + +M + I N++ I L D
Sbjct: 368 VDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLD 427
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPE-ARKLLLFSLKNHHNV--DIDLCNAVI 301
+A E++E + G V F+ GK + A+ + F + I CNA +
Sbjct: 428 EALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASL 487
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
L E R+ EA + +L + GL + N L+ G++++A
Sbjct: 488 YTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKAT 535
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 128/320 (40%), Gaps = 53/320 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+NT+I A LDEAL++ ENM++ V + SY + I + GD KA
Sbjct: 405 GIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKA 464
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
F+ + ++ G P A+ L E G+ +AE + + K G + D ++
Sbjct: 465 IDTFETMKKR-------GIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVT 517
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI------------------------- 159
Y ++ + + G + +LL M+ + PDV I
Sbjct: 518 YNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK 577
Query: 160 ----------YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
Y+ L+ G ++ K L A+E M +S P T T++S+L L +
Sbjct: 578 NLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVD 637
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK------KGFCVKIE 263
+ ++ M N ++ I L G D AF + K C I
Sbjct: 638 LALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIP 697
Query: 264 EVVQFLCKRGKLPEARKLLL 283
VV + G++ +A K+++
Sbjct: 698 GVV----RHGRVEDAIKVVM 713
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 12/235 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD N+LI++ AG +D A K+F +KN ++ +Y+IL+ L + G KA
Sbjct: 545 GCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKA 604
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLS 124
+LF + E G P ++ + L ++ A ++ R M D L+
Sbjct: 605 LELFGSMTES-------GCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLT 657
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFL-PDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y T+I G REG + Y + + FL PD LI G ++ + A++ + +
Sbjct: 658 YNTIIYGLIREGRID--YAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEF 715
Query: 184 LKSSYLPKTST-WHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
+ + L S W ++ +L + E+ +++ ++ Q+ ++ I++L
Sbjct: 716 VHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVL 770
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 145/349 (41%), Gaps = 22/349 (6%)
Query: 17 LIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEK 75
LI C +A VF+ KN + SY+ L+ L +KA +LF+++
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 76 EIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL---RQIMKRGTQ-DPLSYMTVIMG 131
G+ P +Y + HGK+++ ++ ++ RG + + +++ +I
Sbjct: 826 -------GTHPNNFTYNLLLD---AHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISA 875
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
+ +L ++ DF P Y LIDG L+ + AM+ E+ML P
Sbjct: 876 LVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPN 935
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
+ ++ ++ + G + + M+ IR ++ T +E L G D+A + E
Sbjct: 936 SVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFE 995
Query: 252 LLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL--CNAVILGLCE 306
L G V ++ L K +L EA L LFS + + DL NA+IL L
Sbjct: 996 ELKLTGLDPDTVSYNFIINGLGKSRRLDEA--LSLFSEMKNRGISPDLYTYNALILHLGI 1053
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+V A + EL GL + N L+ G ++A + K++
Sbjct: 1054 AGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 8/207 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P++ +N LI+ +G +D A ++F+ M + D SY+IL+ LC G D
Sbjct: 929 DYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRID 988
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A + F+EL G P SY I L + + +A + ++ RG + D
Sbjct: 989 EAVQYFEELKLT-------GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDL 1041
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y +I+ G + ++ + P V Y+ LI G A +K
Sbjct: 1042 YTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKK 1101
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPH 209
M+ P T T+ + + G H
Sbjct: 1102 MMVVGCSPNTETFAQLPNKYPRAGLVH 1128
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 140/322 (43%), Gaps = 11/322 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SPD T N+LI+ C G L EA+ + M + ++SIL+ C+ G +A+
Sbjct: 242 SPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKM 301
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYM 126
+ +K+I+L +Y + C + KA+ + + RG + SY
Sbjct: 302 MLGVTMKKDIILD-------VVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYT 354
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ + L M R +P+V Y+ LIDG + K ++ +++M
Sbjct: 355 TMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDR 414
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T++SIL L + ++ + + D+ IR ++ T I+ L G + A
Sbjct: 415 GQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDA 474
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
++ E L KG+ + + ++Q C +G A LL N + VIL
Sbjct: 475 QKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILS 534
Query: 304 LCEINRVLEAFGLCYELVEKGL 325
L E + A L E++ +GL
Sbjct: 535 LFEKDENDMAEKLLREMIARGL 556
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 145/347 (41%), Gaps = 11/347 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ TFNTLI C G++ +AL + + D SY LI LC+ G A
Sbjct: 135 GFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAA 194
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLS 124
+L + K + QP A Y I +C+ A + Q++ KR + D +
Sbjct: 195 LQLLKRVDGKLV-------QPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++I G C G + LL M+ + P + + L+D F ++ K A L +
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTM 307
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K + T++S++ +++ + M R + N+ T I L D
Sbjct: 308 KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+A + E + + V ++ L K GK+ KL+ +I N+++
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ + V +A L L ++G+ ++ L+ L GK+E+A
Sbjct: 428 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDA 474
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 8/182 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+N+LI G + LK+ + M + + +Y+ ++ LC+ DKA L
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL 442
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
L ++ G +P +Y + + LC+ GK A++V ++ +G D +Y
Sbjct: 443 LTNLKDQ-------GIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTV 495
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C +G ++ LL M +P+ + Y+ +I +KD+ +A + L +M+
Sbjct: 496 MIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARG 555
Query: 188 YL 189
L
Sbjct: 556 LL 557
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 141/343 (41%), Gaps = 40/343 (11%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P FN ++ S A + AL + + M+ + +D +++ILI Q G +
Sbjct: 67 TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
+F ++ +K G P A ++ + + LC G +A +++ +G D +SY
Sbjct: 127 VFGKILKK-------GFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYG 179
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T+I G C+ G +LL + + P+ +Y+ +ID + A + +M+
Sbjct: 180 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 239
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T +S++ G E+ V +L + I +NIN + +L
Sbjct: 240 RISPDDFTCNSLIYGFCIMGQLKEA----VGLLHKMILENINPRMYTFSIL--------- 286
Query: 247 FEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
V CK GK+ EA+ +L ++K +D+ N+++ G C
Sbjct: 287 -------------------VDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCL 327
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+ + +A + + +G+ + ++ L V+EA
Sbjct: 328 VKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAV 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 28/143 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N+++ + C ++D+A+ + N+K+ + D +Y++LI+ LCQ G +
Sbjct: 413 DRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLE 472
Query: 64 KAEKLFDELFEK---------EIVLCKF-------------------GSQPLAASYKPIF 95
A+K+F++L K +++ F G P A +Y+ +
Sbjct: 473 DAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVI 532
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
L E + AE++LR+++ RG
Sbjct: 533 LSLFEKDENDMAEKLLREMIARG 555
>Medtr1g080120.2 | PPR containing plant-like protein | HC |
chr1:35583141-35579895 | 20130731
Length = 573
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 143/349 (40%), Gaps = 40/349 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT TFN +I S C G+L AL+ E M D+ +Y+ +IR + +GD + A
Sbjct: 175 GGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLA 234
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ + K G P +Y + + +C+H +A VL + + G D
Sbjct: 235 VSFWKDQLRK-------GFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINM 287
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ ++G Y++ ++ +L P+V Y+ LI + + L+ M
Sbjct: 288 YNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMN 347
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++S P T++ +L L + GF S + + M+ N +I
Sbjct: 348 ETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDI----------------- 390
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
V ++ LCK G + E+ +LL + + + N VI GL
Sbjct: 391 ---------------VTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGL 435
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
+ + A + E+VEKG+ + LV L + EEA I K
Sbjct: 436 ARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFK 484
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 140/342 (40%), Gaps = 15/342 (4%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T N ++ S CS G L A ++ E M S + LIR L + G DK K+ +
Sbjct: 112 TSNKILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMN-- 169
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMG 131
++ G P ++ + LC+ G + A L + G D +Y T+I
Sbjct: 170 -----MMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTII-- 222
Query: 132 HCREGAYENGYELLIW--MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
C + + W LR+ F P + Y L++ + A+E LE M +
Sbjct: 223 RCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCC 282
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P + ++S++ ++G ++A V +L ++ N+ I L HG+ D +I
Sbjct: 283 PDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDI 342
Query: 250 VELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
++++ + V ++ LCK G L + L + + + + DI N ++ LC+
Sbjct: 343 LKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCK 402
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ E+ L + L L N ++ L ++ A
Sbjct: 403 EGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSA 444
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SP T+N L++S C +G LD ++ ++ M + + D +Y+ L+ LC+ G D++
Sbjct: 351 ISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESI 410
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+L L P +Y + L + A+ + +++++G D +++
Sbjct: 411 QLLHSLSGTN-------CSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITH 463
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T++ G C+ +E E+ M R Y C+I G ++ K A++ L+ M+K
Sbjct: 464 RTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVK 523
Query: 186 SSYLPKTSTWHSILARLLEKGFPHES 211
+ P ++++L + +G +E+
Sbjct: 524 AQCKPDGKIYYTLLKSVANEGMVNEA 549
>Medtr1g080120.1 | PPR containing plant-like protein | HC |
chr1:35583728-35579895 | 20130731
Length = 573
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 143/349 (40%), Gaps = 40/349 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT TFN +I S C G+L AL+ E M D+ +Y+ +IR + +GD + A
Sbjct: 175 GGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLA 234
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ + K G P +Y + + +C+H +A VL + + G D
Sbjct: 235 VSFWKDQLRK-------GFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINM 287
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ ++G Y++ ++ +L P+V Y+ LI + + L+ M
Sbjct: 288 YNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMN 347
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
++S P T++ +L L + GF S + + M+ N +I
Sbjct: 348 ETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDI----------------- 390
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
V ++ LCK G + E+ +LL + + + N VI GL
Sbjct: 391 ---------------VTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGL 435
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
+ + A + E+VEKG+ + LV L + EEA I K
Sbjct: 436 ARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFK 484
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 140/342 (40%), Gaps = 15/342 (4%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T N ++ S CS G L A ++ E M S + LIR L + G DK K+ +
Sbjct: 112 TSNKILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMN-- 169
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMG 131
++ G P ++ + LC+ G + A L + G D +Y T+I
Sbjct: 170 -----MMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTII-- 222
Query: 132 HCREGAYENGYELLIW--MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
C + + W LR+ F P + Y L++ + A+E LE M +
Sbjct: 223 RCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCC 282
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P + ++S++ ++G ++A V +L ++ N+ I L HG+ D +I
Sbjct: 283 PDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDI 342
Query: 250 VELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
++++ + V ++ LCK G L + L + + + + DI N ++ LC+
Sbjct: 343 LKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCK 402
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ E+ L + L L N ++ L ++ A
Sbjct: 403 EGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSA 444
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SP T+N L++S C +G LD ++ ++ M + + D +Y+ L+ LC+ G D++
Sbjct: 351 ISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESI 410
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+L L P +Y + L + A+ + +++++G D +++
Sbjct: 411 QLLHSLSGTN-------CSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITH 463
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T++ G C+ +E E+ M R Y C+I G ++ K A++ L+ M+K
Sbjct: 464 RTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVK 523
Query: 186 SSYLPKTSTWHSILARLLEKGFPHES 211
+ P ++++L + +G +E+
Sbjct: 524 AQCKPDGKIYYTLLKSVANEGMVNEA 549
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG +PDT ++N +I+ C +DEA+ +F+ M + + +Y+ LI LC+ G
Sbjct: 4 GGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISY 63
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA--------ERVLRQIMK 116
A KL DE+ ++ G P +Y I LC++ + KA ++V +
Sbjct: 64 ALKLVDEMHDR-------GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFV 116
Query: 117 RGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLL 175
+G D +Y +I G C +G + LL M +PD + Y+ +I +KD+ +
Sbjct: 117 KGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDM 176
Query: 176 AMETLEKMLKSSYL 189
A + L +M+ L
Sbjct: 177 AEKLLREMIARGLL 190
>Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr5:32993125-32987939 | 20130731
Length = 872
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 167/393 (42%), Gaps = 45/393 (11%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNL-------------DEALKVFENMKNFQVTADSASYSI 51
G +P+ T++T I C AG+L DEA +V E MK+ + D YSI
Sbjct: 372 SGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCELDEASQVLEEMKSIGILPDVYGYSI 431
Query: 52 LIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL 111
LI C+ GD K L +++ +I +P ++ I LC+ KT + V+
Sbjct: 432 LIDAFCKNGDDKKVVDLREDMKLNQI-------KPSIVNHTSIIHRLCK-SKTMPMQIVM 483
Query: 112 RQIMKRGTQ----DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
+ G D Y T++ G CREG + +LL M +F P Y I GF
Sbjct: 484 NKFRAIGASGCKYDQTIYETLVDGFCREGDMVSAGKLLEEMGSNNFAPSAFCYCSQIKGF 543
Query: 168 LQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI 227
+ + A++ M K P T + IL+ K +E+ ++ D + N
Sbjct: 544 YKLRQFANALKVYSIMQKRGIRPDTIACNHILSIYCRKREFNEALALSEEFRDHGVSLNP 603
Query: 228 NLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKL--- 281
+ I L +KA +++ ++ K+ V ++ K+ +A KL
Sbjct: 604 YSYNEFINKLCRESFPEKALQLLPVMLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTR 663
Query: 282 -----LLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLV 336
+ F++K H + IDLC + C+I++ + F ++ ++G+H + N L+
Sbjct: 664 MTKVGITFNIKTHTAL-IDLC----IRNCKIDKACDLFE---DMEKRGVHPDQITYNTLI 715
Query: 337 TALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
A G++ A + R+ E +V++YS
Sbjct: 716 AAFCNTGEMIIAKTLFDRMLQ-EGCSPNVVTYS 747
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 161/367 (43%), Gaps = 23/367 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T N LI+ +C + A +F + +D+ + + L++ LC G ++
Sbjct: 90 PDIFTLNILINCYCHVQQMPFAFSIFAKILKMGFESDAITLTTLMKGLCLNGKVKESLHF 149
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
D + G Q +Y + LC+ G+T+ A +LR+I R + D + + T
Sbjct: 150 HDHVLA-------LGFQLDHVTYGTLINGLCKIGETKAALLMLRKIEGRLVESDVVMHNT 202
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I C+ + YEL M+ + P++ ++ LI GF + A +ML +
Sbjct: 203 IIDSLCKHKFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKN 262
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T++ ++ L ++G E+ V +M+ + ++ L+ G+ + +
Sbjct: 263 INPDIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDV---VTYNSLMDGYCLVKEVY 319
Query: 248 E---IVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAVIL 302
E ++ ++ + G I Q LCK + EA L LF+ + D N++I
Sbjct: 320 EAKHVLNIISRMGAAPDI----QSLCKIKMIDEA--LSLFNEMRSKGITPDKVTYNSLID 373
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLD 362
GLC+ R+ A+ E+ G+ + N L+ AL V++A + K+I + +
Sbjct: 374 GLCKARRIPCAWEFVDEMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIKD-QGIQ 432
Query: 363 RSVLSYS 369
+ +YS
Sbjct: 433 SDMYTYS 439
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 153/354 (43%), Gaps = 26/354 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D T TL+ C G + E+L +++ D +Y LI LC+ G+ A
Sbjct: 122 GFESDAITLTTLMKGLCLNGKVKESLHFHDHVLALGFQLDHVTYGTLINGLCKIGETKAA 181
Query: 66 ----EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQ 120
K+ L E ++V+ + I LC+H A + + I KR +
Sbjct: 182 LLMLRKIEGRLVESDVVM-----------HNTIIDSLCKHKFVTDAYELYSEMITKRISP 230
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
+ +++ ++I G C G + + L ML ++ PD+ ++ L+D ++ K A +
Sbjct: 231 NIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPDIYTFNILVDVLCKEGKIKEAKNVI 290
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
M+K P T++S++ +E+ V NI + + I+ L
Sbjct: 291 AVMMKEGVEPDVVTYNSLMDGYCLVKEVYEAKHVL------NIISRMG-AAPDIQSLCKI 343
Query: 241 GHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
D+A + + KG V ++ LCK ++P A + + N +I
Sbjct: 344 KMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTY 403
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
N++I LC+ + V +A L ++ ++G+ ++ + L+ L +G++++A I
Sbjct: 404 NSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVI 457
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 16/278 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ TFN+LI+ C G L EA +F M + D +++IL+ LC+ G +A+
Sbjct: 229 SPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPDIYTFNILVDVLCKEGKIKEAKN 288
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMT 127
+ V+ K G +P +Y + C + +A+ VL I + G + +
Sbjct: 289 VIA-------VMMKEGVEPDVVTYNSLMDGYCLVKEVYEAKHVLNIISRMGAAPDIQSL- 340
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
C+ + L M + PD Y+ LIDG + + A E +++M +
Sbjct: 341 -----CKIKMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANG 395
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
T++S++ L + ++ + + D+ I+ ++ + I+ L G A
Sbjct: 396 IPANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQ 455
Query: 248 EIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLL 282
I + L KG+ + + ++ LC +G EA LL
Sbjct: 456 VIFQDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLL 493
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD T+N+LI C A + A + + M + A+ +Y+ LI LC+ DKA
Sbjct: 360 GITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLIDALCKNHHVDKA 419
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L ++ ++ G Q +Y + LC+ G+ + A+ + + ++ +G + +
Sbjct: 420 IVLVKKIKDQ-------GIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGYNLNVCT 472
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C +G ++ LL M +PD Y+ + + D+ A + L +M+
Sbjct: 473 YSIMINGLCSKGLFDEATTLLSKMEDNGCIPDAVTYEPINRALFKNDENDKAEQLLREMI 532
Query: 185 KSSYL 189
L
Sbjct: 533 ARGLL 537
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD I S C +DEAL +F M++ +T D +Y+ LI LC+ A
Sbjct: 332 GAAPD-------IQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCA 384
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ DE+ I F +Y + LC++ KA ++++I +G Q D +
Sbjct: 385 WEFVDEMHANGIPANIF-------TYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYT 437
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C++G ++ + +L + + +V Y +I+G K A L KM
Sbjct: 438 YSILIDGLCKQGRLKDAQVIFQDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLLSKME 497
Query: 185 KSSYLPKTSTWHSI 198
+ +P T+ I
Sbjct: 498 DNGCIPDAVTYEPI 511
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G D T++ LI C G L +A +F+++ + +YSI+I LC +G +D
Sbjct: 428 DQGIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGYNLNVCTYSIMINGLCSKGLFD 487
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+A L ++ + G P A +Y+PI + L ++ + KAE++LR+++ RG
Sbjct: 488 EATTLLSKMEDN-------GCIPDAVTYEPINRALFKNDENDKAEQLLREMIARG 535
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 133/329 (40%), Gaps = 51/329 (15%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+NTLI+ C G L++A+++F M+ + + S++ILI LC+ GD + +
Sbjct: 134 PDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSV 193
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
+ ++ + +P + + K KA + + + G T D SY
Sbjct: 194 LAVMIKQSV-------KPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNI 246
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G + + L M + PD Y LIDG + + + +++M +
Sbjct: 247 MINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATG 306
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
T+ S+L N+ KS GH D A
Sbjct: 307 RSANVITYSSLL----------------------------NVLCKS-------GHFDTAI 331
Query: 248 EIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
I + KGF V +V LCK G+L +A+++ L + +D+ L +I GL
Sbjct: 332 RIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGL 391
Query: 305 CEINRVLEAFG-----LCYELVEKGLHQE 328
C EA+G + YE++ + L +
Sbjct: 392 CREALFDEAYGCTPNAVTYEIIIRALFKN 420
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 138/351 (39%), Gaps = 33/351 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT T TL+ C + +AL +++ D+ SY LI LC+ G+
Sbjct: 40 GYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAP 99
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA-ERVLRQIMKRGTQDPLS 124
++ Y I LC+ A + ++KR D ++
Sbjct: 100 DQFM---------------------YSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVT 138
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C G E+ L M ++ +P+V ++ LIDG ++ L M+
Sbjct: 139 YNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMI 198
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K S P T S L++ F + A + + + + + +S ++ +
Sbjct: 199 KQSVKPDVVTCSS----LIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKA 254
Query: 245 KAFEIVELLYKK-------GFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
K + +L+K+ + ++ L K G++ L+ + ++
Sbjct: 255 KMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITY 314
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++++ LC+ A + ++ +KG + N LV L G++++A
Sbjct: 315 SSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDA 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 127/304 (41%), Gaps = 29/304 (9%)
Query: 79 LCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGA 137
+ K G QP + + + LC + + +KA ++ +G + D +SY T+I G C+ G
Sbjct: 36 ILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGE 95
Query: 138 YE---------------------NGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
+ + Y+L M+ + PDV Y+ LI GF + A
Sbjct: 96 TKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDA 155
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIEL 236
+ +M + +P +++ ++ L ++G V +M+ ++++ ++ + I+
Sbjct: 156 IRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDG 215
Query: 237 LFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVD 293
F +KA I + + G + + ++ L K + EA ++LF ++
Sbjct: 216 YFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEA--VILFKEMQFKSMT 273
Query: 294 IDLC--NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
D + +I GL ++ R+ + L E+ G + + L+ L G + A I
Sbjct: 274 PDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRI 333
Query: 352 SKRI 355
+I
Sbjct: 334 FTKI 337
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F+P F +L++ C G L EA V MK+ + D ++ L+ Q G A
Sbjct: 249 FTPTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPDIVVFNNLLGGYAQAGKMGDAY 308
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
L E+ K G +P AASY + Q LC+H K +A R+ ++ + G Q D ++Y
Sbjct: 309 DLLKEMRRK-------GCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITY 361
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G C+ G + GYELL M + P+ Y ++ +K++ ME + +M K
Sbjct: 362 TTLISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQK 421
Query: 186 SSYLPKTSTWHSIL 199
+P + ++ ++
Sbjct: 422 IGCVPDLNIYNIVI 435
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD FN L+ + AG + +A + + M+ ++ASY++LI++LC+ +
Sbjct: 281 DAGIEPDIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLE 340
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A ++F E + + G Q +Y + C+ GK ++ +L Q+ + G + +
Sbjct: 341 EAMRMFVE-------MQRSGCQMDVITYTTLISGFCKWGKIKRGYELLDQMKQEGHSPNQ 393
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI 164
L+YM +++ H ++ E EL+ M + +PD+ IY+ +I
Sbjct: 394 LTYMHIMVAHEKKEELEECMELVNEMQKIGCVPDLNIYNIVI 435
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 20/345 (5%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
F L+ SA + +A++V + M + D + L+ LC+ G +A LF+++
Sbjct: 186 VFVILMRRFASARMVSKAIEVLDEMPKYGCEVDEYVFGCLLDALCKNGSVKEAASLFEDM 245
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
++ P + + C+ GK +A+ VL Q+ G + D + + ++ G
Sbjct: 246 --------RYKFTPTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPDIVVFNNLLGG 297
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
+ + G + Y+LL M R+ P+ Y LI + +K AM +M +S
Sbjct: 298 YAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMD 357
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+ ++++ + G + M N + ++ H +++ E +E
Sbjct: 358 VITYTTLISGFCKWGKIKRGYELLDQMKQEGHSPN---QLTYMHIMVAHEKKEELEECME 414
Query: 252 LL--YKKGFCVK----IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
L+ +K CV V++ CK G++ + +L + N ID +I G
Sbjct: 415 LVNEMQKIGCVPDLNIYNIVIRLACKLGEVKQGVRLWNEMEASGLNPGIDTFVIMINGFL 474
Query: 306 EINRVLEAFGLCYELVEKGLHQ--ELTCLNDLVTALEARGKVEEA 348
E ++EA E+V +GL + L +L+ +L K+E A
Sbjct: 475 EQECLVEACEFFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMA 519
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 131/311 (42%), Gaps = 11/311 (3%)
Query: 49 YSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE 108
+ IL+R KA ++ DE+ K+G + + + LC++G ++A
Sbjct: 187 FVILMRRFASARMVSKAIEVLDEM-------PKYGCEVDEYVFGCLLDALCKNGSVKEAA 239
Query: 109 RVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL 168
+ + + T + +++ G C+EG +L+ M PD+ +++ L+ G+
Sbjct: 240 SLFEDMRYKFTPTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPDIVVFNNLLGGYA 299
Query: 169 QKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNIN 228
Q K A + L++M + P +++ ++ L + E+ R+ V M + ++
Sbjct: 300 QAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVI 359
Query: 229 LSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLC---KRGKLPEARKLLLFS 285
T I G + +E+++ + ++G + + K+ +L E +L+
Sbjct: 360 TYTTLISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEM 419
Query: 286 LKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA-LEARGK 344
K D+++ N VI C++ V + L E+ GL+ + ++ LE
Sbjct: 420 QKIGCVPDLNIYNIVIRLACKLGEVKQGVRLWNEMEASGLNPGIDTFVIMINGFLEQECL 479
Query: 345 VEEAAFISKRI 355
VE F + +
Sbjct: 480 VEACEFFKEMV 490
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 50/357 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD TFNTLI C G + EAL +++ + D SY LI LC+ G +A
Sbjct: 15 GFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKMGKTTEA 74
Query: 66 ----EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQ 120
K+ +L ++V+ Y I LC+ +A + + I KR +
Sbjct: 75 LQVLRKIDGKLVNTDVVM-----------YSTIIDSLCKDKLVTEAYVLYSEMITKRISP 123
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D +++ +I G C G + + L M+ ++ PDV ++ L+D F ++ A +
Sbjct: 124 DVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVI 183
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
M+K +P T+ S++ +++ V ++ + N N
Sbjct: 184 AMMMKEGVIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNAN------------ 231
Query: 241 GHRDKAFEIVELLYKKGFCVKIEEVVQFL------CKRGKLPEARKLLLFSLKNHHNVDI 294
++ I+ GFC KI+ V + L C RG P+ + H NV
Sbjct: 232 -----SYNII----INGFC-KIKMVDEALNLFNEMCCRGIAPDK----MHDRGQHANVIT 277
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
N+ + LC+ ++V +A ++ + G+ + N L+ L ++E A I
Sbjct: 278 --YNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVI 332
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 141/346 (40%), Gaps = 27/346 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D ++ TLI+ C G EAL+V + V D YS +I +LC+ +A
Sbjct: 50 GFHLDQVSYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEA 109
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
L+ E+ K I P ++ + C G+ ++A + + ++K D +
Sbjct: 110 YVLYSEMITKRI-------SPDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYT 162
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++ C+EG + ++ M++ +PDV Y L+DG+ +K A L +
Sbjct: 163 FNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLMDGYCLVNKVNKAKHVLSLIS 222
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMML----------DRNIRQNINLSTKSI 234
+ P ++++ I+ + E+ + M DR N+ +
Sbjct: 223 RMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQHANVITYNSFL 282
Query: 235 ELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHN 291
L + DKA V+ + G I ++ LCK +L A+ + L +
Sbjct: 283 HALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVIFQDLLIKGYK 342
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVT 337
V + N +I GLC +A L ++ E G C+ D+VT
Sbjct: 343 VTVWTYNIMINGLCLEGLFDQAMILLEKMEENG------CIPDVVT 382
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 4/203 (1%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ +L+ +C +++A V + +T ++ SY+I+I C+ D+A
Sbjct: 190 GVIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEA 249
Query: 66 EKLFDELFEKEIVLCKF---GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
LF+E+ + I K G +Y LC++ + KA +++I G Q
Sbjct: 250 LNLFNEMCCRGIAPDKMHDRGQHANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPY 309
Query: 123 L-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+ +Y +I G C+E EN + +L + + V Y+ +I+G + AM LE
Sbjct: 310 INTYNILIDGLCKEVRLENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDQAMILLE 369
Query: 182 KMLKSSYLPKTSTWHSILARLLE 204
KM ++ +P T+ +I+ L +
Sbjct: 370 KMEENGCIPDVVTYETIIRALFK 392
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 22/295 (7%)
Query: 79 LCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGA 137
+ K G QP ++ + + LC +GK ++A ++ G D +SY T+I G C+ G
Sbjct: 11 ILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKMGK 70
Query: 138 YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL-EKMLKSSYLPKTSTWH 196
++L + + DV +Y +ID L KDK + L +M+ P T+
Sbjct: 71 TTEALQVLRKIDGKLVNTDVVMYSTIIDS-LCKDKLVTEAYVLYSEMITKRISPDVVTFS 129
Query: 197 SILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKK 256
+++ G E+ + M+ +NI ++ ++ G+ +A ++ ++ K+
Sbjct: 130 ALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKE 189
Query: 257 GFCVKIEEVVQF------LCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRV 310
G I +VV + C K+ +A+ +L + + + N +I G C+I V
Sbjct: 190 GV---IPDVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMV 246
Query: 311 LEAFGLCYELV----------EKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
EA L E+ ++G H + N + AL +V++A K+I
Sbjct: 247 DEALNLFNEMCCRGIAPDKMHDRGQHANVITYNSFLHALCKNHQVDKAIAFVKKI 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G + T+N+ +H+ C +D+A+ + +K+ + +Y+ILI LC+ +
Sbjct: 268 DRGQHANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLE 327
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
A+ +F +L K G + +Y + LC G +A +L ++ + G D
Sbjct: 328 NAQVIFQDLLIK-------GYKVTVWTYNIMINGLCLEGLFDQAMILLEKMEENGCIPDV 380
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
++Y T+I + + +LL M+ R L
Sbjct: 381 VTYETIIRALFKNDENDRAEKLLREMIARGLL 412
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 153/343 (44%), Gaps = 11/343 (3%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
+ ++T+I C + +A ++ M ++ ++S LI C G + A +LF
Sbjct: 192 NVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLF 251
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTV 128
+E+ K I P A ++ + LC+ GK ++A+ V+ +MK G + + +Y T+
Sbjct: 252 NEMVMKNI-------NPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTL 304
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ G+C +L + R P+ Y+ +I+GF + A+ +M
Sbjct: 305 MDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGI 364
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
P T++S++ L + G + + M + I +I I++ + H DKA
Sbjct: 365 APHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIA 424
Query: 249 IVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
+V+ + + G + ++ LCK G+L A+ + L +NV+ N +I GLC
Sbjct: 425 LVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLC 484
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ EA L ++ + G+ + ++ AL + + E+A
Sbjct: 485 KEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKA 527
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P T+N+LI C AG + A ++ + M N + AD +Y+ LI C+ DKA
Sbjct: 363 GIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKA 422
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L ++ E G QP +Y + LC+ G+ + A+ V + ++ +G + +
Sbjct: 423 IALVKKIKEH-------GIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWT 475
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G C+EG ++ LL M +PD Y+ +I KD+ A + L +M+
Sbjct: 476 YNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMV 535
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 11/278 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P TF++LI+ C G +A ++F M + D+ +++IL+ LC+ G +A+ +
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNV 285
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLSYMT 127
V+ K G +P +Y + C + KA+ VL I + R + SY
Sbjct: 286 IA-------VMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNI 338
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ + L M R P Y+ LIDG + + A E +++M +
Sbjct: 339 MINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNC 398
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
T++S++ + ++ + + + I+ N+ I+ L G A
Sbjct: 399 IPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQ 458
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
++ + L KG+ V ++ LCK G EA LL
Sbjct: 459 DVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLL 496
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 148/386 (38%), Gaps = 68/386 (17%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T + LI+ +C G + A VF IL LC G ++A
Sbjct: 97 GVKPDLFTLSILINCYCHLGQMTFAFSVFA--------------KILKMGLCLNGKVNEA 142
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI----------- 114
D + G +Y + LC+ G+TR A +VLRQI
Sbjct: 143 LLFHDHVLA-------LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVM 195
Query: 115 -------------------------MKRGTQDPLSYMTVIMGHCREGAYENGYELLIWML 149
+KR +++ ++I G C G +++ + L M+
Sbjct: 196 YSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMV 255
Query: 150 RRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPH 209
++ PD ++ L+D ++ K A + M+K P T+++++
Sbjct: 256 MKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVG 315
Query: 210 ESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFC-------VKI 262
++ V ++ R + +++S ++ + K + L+ + C V
Sbjct: 316 KAKHVLSIIS----RMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTY 371
Query: 263 EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVE 322
++ LCK G++P A +L+ N DI N++I C+ V +A L ++ E
Sbjct: 372 NSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKE 431
Query: 323 KGLHQELTCLNDLVTALEARGKVEEA 348
G+ + N L+ L G+++ A
Sbjct: 432 HGIQPNMCTYNILIDGLCKGGQLKNA 457
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 8/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T+NTL+ +C + +A V + +V +S SY+I+I C+ D+A
Sbjct: 293 GVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEA 352
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF E +C G P +Y + LC+ G+ A ++ ++ D ++
Sbjct: 353 LCLFHE-------MCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVT 405
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++I C+ + L+ + P++ Y+ LIDG + + A + + +L
Sbjct: 406 YNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLL 465
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
Y T++ ++ L ++G E+ + M D I + I+ LF +
Sbjct: 466 IKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENE 525
Query: 245 KAFEIVELLYKKGF 258
KA +++ + KG
Sbjct: 526 KAQKLLREMVIKGL 539
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 20/272 (7%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD TF++LI+ C G +A ++F M + D +++IL+ LC+ GD A+ L
Sbjct: 167 PDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNL 226
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
V+ K G P +Y + C + KA+ V I + G D +Y
Sbjct: 227 L-------AVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSI 279
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C+ + L M RR P+ Y+ LIDG + + A E ++ M +
Sbjct: 280 MINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNG 339
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
T++S++ L + H +D+ I+ ++ I+ L G A
Sbjct: 340 QPADIFTYNSLIDALCKN---HH--------IDQGIQPDMYTYNILIDGLCKGGRLKNAQ 388
Query: 248 EIVE-LLYKKGFCVKIEEVVQFLCKRGKLPEA 278
+I + LL K+G +++ ++ + G +P+A
Sbjct: 389 DIFQDLLIKEGLFDEVDALMSKMDDNGIIPDA 420
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ +L+ +C +++A VF + V D+ +YSI+I C+ D+A
Sbjct: 234 GVIPDVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEA 293
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LFDE+ + G P +Y + LC+ G+ A ++ + G D +
Sbjct: 294 LSLFDEMRRR-------GIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQPADIFT 346
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDK---------PLL 175
Y ++I C+ + G + PD+ Y+ LIDG + + LL
Sbjct: 347 YNSLIDALCKNHHIDQGIQ-----------PDMYTYNILIDGLCKGGRLKNAQDIFQDLL 395
Query: 176 AMETL--------EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
E L KM + +P T+ +I+ L K ++ ++ M+ R +
Sbjct: 396 IKEGLFDEVDALMSKMDDNGIIPDAVTYVTIIRALFHKDENEQAEKLLREMIARGL 451
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD T++ +I+ C +DEAL +F+ M+ + ++ +Y+ LI LC+ G A
Sbjct: 269 GVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYA 328
Query: 66 EKLFDELFEK----EI--------VLCKF-----GSQPLAASYKPIFQYLCEHGKTRKAE 108
+L D + +I LCK G QP +Y + LC+ G+ + A+
Sbjct: 329 WELVDTMHNNGQPADIFTYNSLIDALCKNHHIDQGIQPDMYTYNILIDGLCKGGRLKNAQ 388
Query: 109 RVLRQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL 168
+ + ++ +EG ++ L+ M +PD Y +I
Sbjct: 389 DIFQDLL-----------------IKEGLFDEVDALMSKMDDNGIIPDAVTYVTIIRALF 431
Query: 169 QKDKPLLAMETLEKMLKSSYL 189
KD+ A + L +M+ L
Sbjct: 432 HKDENEQAEKLLREMIARGLL 452
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 105/238 (44%), Gaps = 14/238 (5%)
Query: 114 IMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKP 173
I K+ D +++ ++I G C G +++ + L M+ ++ DV ++ L+D ++
Sbjct: 161 IAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDALCKEGDV 220
Query: 174 LLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS 233
+A L M+K +P T+ S++ +++ V ++ + + + +
Sbjct: 221 KVAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIM 280
Query: 234 IELLFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHH 290
I D+A + + + ++G V ++ LCK G++P A +L+ N
Sbjct: 281 INGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQ 340
Query: 291 NVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
DI N++I LC+ + +++G+ ++ N L+ L G+++ A
Sbjct: 341 PADIFTYNSLIDALCKNHH-----------IDQGIQPDMYTYNILIDGLCKGGRLKNA 387
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 140/332 (42%), Gaps = 12/332 (3%)
Query: 29 EALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLA 88
EA+ +F + + + + +IL+R LC+ G+ D+A KL +L FG P
Sbjct: 196 EAVDLFWELVRLRYCPVTYTINILMRGLCRAGEIDEACKLLGDLRS-------FGCSPDV 248
Query: 89 ASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELLI 146
+Y I C + +A L ++ G P +SY T+I G+C+ + L
Sbjct: 249 ITYNTIIHGFCRISEVDRARSFLNEVCLNGQVAPDVVSYTTIISGYCKLSRMKEASSLFD 308
Query: 147 WMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKG 206
M+R +P+ ++ LIDGF++ ++ KML P T+ S++ G
Sbjct: 309 EMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVG 368
Query: 207 FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVK---IE 263
+ + M R + ++ + + + +A +I+ L + +
Sbjct: 369 QVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYN 428
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEK 323
V+ CK G + EA K+L +N D +I+G C R+ EA G+ +++
Sbjct: 429 PVIDGYCKSGNVDEANKILAEMEENRCKPDKLTYTILIIGHCSKGRMAEAIGIFDKMLAV 488
Query: 324 GLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+ +N+L + L G EAA + + +
Sbjct: 489 CCAPDEITINNLRSCLLKAGMPAEAARVKQAL 520
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 13/264 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVF-ENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G SPD T+NT+IH C +D A E N QV D SY+ +I C+ +
Sbjct: 243 GCSPDVITYNTIIHGFCRISEVDRARSFLNEVCLNGQVAPDVVSYTTIISGYCKLSRMKE 302
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
A LFDE+ G+ P A ++ + + G + + +++ RG D +
Sbjct: 303 ASSLFDEMIRS-------GTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVV 355
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ ++I G+ G + E+ M R + + L++GF + ++ A + L ++
Sbjct: 356 TFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRL 415
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+S +P++ ++ ++ + G E+ ++ M + R + T +I L+ GH +
Sbjct: 416 KQSDVVPQSFVYNPVIDGYCKSGNVDEANKILAEMEEN--RCKPDKLTYTI-LIIGHCSK 472
Query: 244 DKAFEIVELLYKK-GFCVKIEEVV 266
+ E + + K C +E+
Sbjct: 473 GRMAEAIGIFDKMLAVCCAPDEIT 496
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 43/210 (20%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PD TF +LI+ + G + AL+++ M + +V A ++S+L+ C+ +A
Sbjct: 349 GCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEA 408
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLS 124
+ L + ++V P + Y P+ C+ G +A ++L ++ + R D L+
Sbjct: 409 RDILTRLKQSDVV-------PQSFVYNPVIDGYCKSGNVDEANKILAEMEENRCKPDKLT 461
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I+GHC +G A+ +KML
Sbjct: 462 YTILIIGHCSKGRMAE-----------------------------------AIGIFDKML 486
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARV 214
P T +++ + LL+ G P E+ARV
Sbjct: 487 AVCCAPDEITINNLRSCLLKAGMPAEAARV 516
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+ TLI H AG LD A+ ++E M+ ++ D+ +YS++I L + G+ A++L
Sbjct: 475 PDRVTYCTLIDIHAKAGYLDVAMSMYERMQQVGLSPDTFTYSVMINCLGKSGNLAAADRL 534
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F E+ ++ G P +Y + + A ++ R + G + D ++Y
Sbjct: 535 FGEMVDQ-------GCVPNIVTYNIMIALQAKARNYEAALKLYRDMQNAGFRPDKVTYSI 587
Query: 128 V--IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
V ++GHC G E + + M +R+++PD +Y L+D + + A E ML
Sbjct: 588 VMEVLGHC--GYLEEAEAVFVEMKQRNWVPDEPVYGLLVDLWGKAGNVEKAWEWYGAMLS 645
Query: 186 SSYLPKTSTWHSILARLL 203
+ LP T +S+L+ L
Sbjct: 646 AGLLPNVPTCNSLLSAFL 663
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 11/277 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPDT T++ +I+ +GNL A ++F M + + +Y+I+I + +Y+ A
Sbjct: 507 GLSPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNIVTYNIMIALQAKARNYEAA 566
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
KL+ ++ G +P +Y + + L G +AE V ++ +R D
Sbjct: 567 LKLYRDMQNA-------GFRPDKVTYSIVMEVLGHCGYLEEAEAVFVEMKQRNWVPDEPV 619
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ + G E +E ML LP+V + L+ FL+ + A L+ M+
Sbjct: 620 YGLLVDLWGKAGNVEKAWEWYGAMLSAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQSMV 679
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
P T+ +L+ + ++ +M ++ L + G RD
Sbjct: 680 ALGLSPSLQTYTLLLSCCTDAQSQYDMGFCCELMKVSGHPAHVFLQSMPAAGPDGQNVRD 739
Query: 245 KAFEIVELLY---KKGFCVKIEEVVQFLCKRGKLPEA 278
A + ++L++ ++G ++ VV FL K G EA
Sbjct: 740 HASKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEA 776
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N+L+ +C +++A +F M + VTA+ SYSI+I C+ D+A
Sbjct: 341 GIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQA 400
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ----- 120
KLF E+ K+I P +Y + LC+ G+ A + ++ RG Q
Sbjct: 401 MKLFKEMHHKQIF-------PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIIT 453
Query: 121 ------------DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL 168
+ +Y +I G C+ G E+ + +L + + V Y +I GF
Sbjct: 454 LTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFC 513
Query: 169 QKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLE 204
K AM L KM + +P T+ I+ L +
Sbjct: 514 NKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFD 549
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 30/278 (10%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+N LI+ C G L +A+ +F M + + D +++IL+ C+ G +A+
Sbjct: 274 PDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNG 333
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
++ K G +P +Y + C + KA+ + + RG T + SY
Sbjct: 334 L-------AMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSI 386
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I C+ + +L M + P+V Y LIDG + + A+E ++M
Sbjct: 387 MINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRG 446
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T L R L+ D+ IR N+ T I+ L G + A
Sbjct: 447 QQPDIIT----LTRQLK---------------DQGIRPNMFTYTILIDGLCKGGRLEDAR 487
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
I E L KG+ + + ++ C +G EA LL
Sbjct: 488 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLL 525
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 128/311 (41%), Gaps = 24/311 (7%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
P+ +NT+I S C ++A ++ M + ++ D +Y+ LI C G A
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
LF+++ + I P ++ + C+ G+ ++A+ L +MK+G + D ++Y
Sbjct: 297 GLFNKMTSENI-------NPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTY 349
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+++ +C + M R +V Y +I+ F + AM+ ++M
Sbjct: 350 NSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHH 409
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ S++ L + G + + M DR + +I T+ ++ G R
Sbjct: 410 KQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLK---DQGIRPN 466
Query: 246 AFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
F L + LCK G+L +AR + L +N+ ++ +I G C
Sbjct: 467 MFTYTIL-------------IDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFC 513
Query: 306 EINRVLEAFGL 316
EA L
Sbjct: 514 NKGLFDEAMTL 524
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 8/234 (3%)
Query: 105 RKAERVLRQIMKRGTQDPLS-YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCL 163
R ++LR++ + Q L Y T+I C++ + ++L M+ + PDV Y+ L
Sbjct: 223 RAPLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNAL 282
Query: 164 IDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
I+GF K A+ KM + P T++ ++ ++G E+ MM+ + I
Sbjct: 283 INGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGI 342
Query: 224 RQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARK 280
+ ++ ++ +KA I + +G + ++ CK + +A K
Sbjct: 343 KPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMK 402
Query: 281 LLLFSLKNHHNV--DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCL 332
LF +H + ++ +++I GLC+ R+ A L E+ ++G ++ L
Sbjct: 403 --LFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITL 454
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 22/285 (7%)
Query: 85 QPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLSYMTVIMGHCREGAYENGYE 143
QP Y I +C+ A + +++ KR D +Y +I G C G ++
Sbjct: 238 QPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIG 297
Query: 144 LLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLL 203
L M + PDV ++ L+D F ++ + A L M+K P T++S++ R
Sbjct: 298 LFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYC 357
Query: 204 EKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV-ELLYKKGF--CV 260
+++ + M R + N+ + I D+A ++ E+ +K+ F +
Sbjct: 358 LVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVI 417
Query: 261 KIEEVVQFLCKRGKLPEARKL---------------LLFSLKNHHNVDIDLCNAVIL--G 303
++ LCK G++ A +L L LK+ + ++ IL G
Sbjct: 418 TYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKD-QGIRPNMFTYTILIDG 476
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
LC+ R+ +A + +L+ KG + + ++ +G +EA
Sbjct: 477 LCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEA 521
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 13/308 (4%)
Query: 53 IRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLR 112
++ LC G +A D++ KE L + SY + LC+ G+TR A +VLR
Sbjct: 1 MKGLCLNGKVKEALYFHDDVIAKEFQLNQ-------VSYGTLIDGLCKAGETRAAMQVLR 53
Query: 113 QIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKD 171
I Q + + Y T+I C++ + ++L M+ P+V Y+ LI GF
Sbjct: 54 NIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMRIFPNVVTYNTLIYGFCIVG 113
Query: 172 KPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ A++ L +ML + P T+++++ L ++G ++ +V M+ + + N+ +
Sbjct: 114 QMKQAIDLLNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYS 173
Query: 232 KSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLL-FSLK 287
++ F +KA + + ++G + ++ LCK + EA L LK
Sbjct: 174 FLMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLK 233
Query: 288 NHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
N DI N++I GL + R+ +A+ L E+ +G ++ N L+ AL +V+
Sbjct: 234 NMAP-DIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDM 292
Query: 348 AAFISKRI 355
A + +I
Sbjct: 293 AITLFTKI 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 150/335 (44%), Gaps = 11/335 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ ++T+I+S C + +A ++ M ++ + +Y+ LI C G +A L
Sbjct: 62 PNVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMRIFPNVVTYNTLIYGFCIVGQMKQAIDL 121
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
+E+ K I P ++ + LC+ G+ +KA +VL ++K+G + + ++Y
Sbjct: 122 LNEMLLKNI-------SPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSF 174
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+ + M+RR +V Y +I+G + A+ ++M +
Sbjct: 175 LMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKN 234
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T++S++ LL+ G ++ + M +R ++ ++ L + D A
Sbjct: 235 MAPDIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAI 294
Query: 248 EIVELLYKKG---FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ + +G + +V LCK G+L +A+++ L +++D+ + +I GL
Sbjct: 295 TLFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMINGL 354
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
C+ + +A L ++ + G L+ AL
Sbjct: 355 CKESLFDKALSLLSKMKDNGCTPNPVTFEILIRAL 389
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 148/339 (43%), Gaps = 15/339 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F + ++ TLI C AG A++V N+ V + YS +I +LC+ A
Sbjct: 25 FQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAF 84
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLSY 125
L+ E+ I P +Y + C G+ ++A +L + ++K + + +++
Sbjct: 85 DLYSEMVAMRIF-------PNVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTF 137
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T++ G C+EG + ++L +M+++ +V Y L+DG+ + A M++
Sbjct: 138 NTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFLVKEVNKATFVFNTMVR 197
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
++ ++ L + E+ + M +N+ +I I+ L +G
Sbjct: 198 RGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRISD 257
Query: 246 AFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A+++V ++ +G + ++ LCK ++ A + LF+ + + IL
Sbjct: 258 AWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMA--ITLFTKIKDQGIQPYIYTYTIL 315
Query: 303 --GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
GLC+ R+ +A + L+ KG H ++ ++ L
Sbjct: 316 VDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMINGL 354
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+PD T+N+LI G + +A + M N AD +Y+ L+ LC+ D A
Sbjct: 235 MAPDIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAI 294
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
LF ++ ++ G QP +Y + LC++G+ + A+ V + ++ +G D Y
Sbjct: 295 TLFTKIKDQ-------GIQPYIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMY 347
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+I G C+E ++ LL M P+ ++ LI + D A+E L KM+
Sbjct: 348 TVMINGLCKESLFDKALSLLSKMKDNGCTPNPVTFEILIRALFENDMNDKAVELLRKMI 406
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 8/252 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SP+ TFNTL+ C G + +A KV M V + +YS L+ + +KA
Sbjct: 130 ISPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFLVKEVNKAT 189
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSY 125
+F+ + + G SY + LC++ +A + +++ +K D ++Y
Sbjct: 190 FVFNTMVRR-------GVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTY 242
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I G + G + ++L+ M R DV Y+ L+D + + +A+ K+
Sbjct: 243 NSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKD 302
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ ++ L + G ++ V ++L + ++ + T I L DK
Sbjct: 303 QGIQPYIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMINGLCKESLFDK 362
Query: 246 AFEIVELLYKKG 257
A ++ + G
Sbjct: 363 ALSLLSKMKDNG 374
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+N+L+ + C +D A+ +F +K+ + +Y+IL+ LC+ G A
Sbjct: 269 GQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDA 328
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
++++ +I+L K G Y + LC+ KA +L ++ G T +P++
Sbjct: 329 QEVY------QILLIK-GYHLDVRMYTVMINGLCKESLFDKALSLLSKMKDNGCTPNPVT 381
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFL 154
+ +I + ELL M+ RD L
Sbjct: 382 FEILIRALFENDMNDKAVELLRKMIVRDLL 411
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M G G P+ TFNTLI+ C G L EA +VF MK V + +Y+ LI Q G
Sbjct: 281 MMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAG 340
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
+ + LF+E+ ++ + +Y + LC+ GKT+KA +++++ K
Sbjct: 341 NSEMGIGLFEEMERNKV-------KADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLV 393
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ ++ +I G C E + + M+R F P+ + L F + + A++
Sbjct: 394 PNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQV 453
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKG 206
L ML+ P +S + + L G
Sbjct: 454 LRDMLERFMTPDSSILSEVYSGLCRCG 480
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 138/325 (42%), Gaps = 12/325 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P + N + S + + + M+ +++ + + ++++ C+ G+ +KA
Sbjct: 180 GFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKA 239
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
++ +++ K++ LC P ++ + C+ G A +V +M + P +
Sbjct: 240 SEVLEKM--KDMGLC-----PNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVV 292
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ T+I G C+EG + M + P+V Y+ LI+GF Q + + E+M
Sbjct: 293 TFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEM 352
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
++ T++ ++ L ++G ++A + + N+ N + + I +
Sbjct: 353 ERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNS 412
Query: 244 DKAFEIVELLYKKGFCVK---IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
++AF + + + GF + CK A ++L L+ D + + V
Sbjct: 413 ERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEV 472
Query: 301 ILGLCEINRVLEAFGLCYELVEKGL 325
GLC R A LC E+ K L
Sbjct: 473 YSGLCRCGRKQFALMLCSEIEAKRL 497
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTADSASYSILIRNLCQRGD 61
D G P+ TFN+LI +C G L ALKV + M KN V + +++ LI C+ G
Sbjct: 248 DMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKN-GVFPNVVTFNTLINGFCKEGK 306
Query: 62 YDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ- 120
+A ++F E+ + P +Y + + G + + ++ + +
Sbjct: 307 LHEANRVFSEMKLANVA-------PNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKA 359
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D L+Y +I+G C+EG + ++ + + + +P+ + LI G ++ A
Sbjct: 360 DILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVY 419
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGF 207
M++S + P +T+ R+L F
Sbjct: 420 RSMVRSGFSPNENTF-----RMLASAF 441
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ T+NTLI+ AGN + + +FE M+ +V AD +Y+ LI LC+ G KA
Sbjct: 323 APNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAY 382
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYM 126
+ EL + +V P A+++ + C + +A V R +++ G + + ++
Sbjct: 383 MVKELDKGNLV-------PNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFR 435
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+ C+ ++ ++L ML R PD I + G + + A+ ML S
Sbjct: 436 MLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGRKQFAL-----MLCS 490
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVT 215
K RLL +GF E +T
Sbjct: 491 EIEAK---------RLLPQGFDREKIVIT 510
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 95/242 (39%), Gaps = 8/242 (3%)
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
PL + T+ N + + M F P VE + + L +P L +
Sbjct: 148 SSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSF 207
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
+M ++ P T + +++ + G ++++ V M D + N+ I
Sbjct: 208 YRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCD 267
Query: 240 HGHRDKAFEIVELLYKKG----FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV--D 293
G A ++ +L+ K V ++ CK GKL EA + +FS NV +
Sbjct: 268 KGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANR--VFSEMKLANVAPN 325
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
+ N +I G + GL E+ + ++ N L+ L GK ++AA++ K
Sbjct: 326 VVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVK 385
Query: 354 RI 355
+
Sbjct: 386 EL 387
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D T+ L+ + A + EAL FENM+ D SY +IR LC G D A + +
Sbjct: 235 DVNTWTILVSLYGKAKKISEALLAFENMQKCGCEPDVVSYRTIIRLLCSSGKGDIAMEFY 294
Query: 70 DELFEKEIVL-----------CKFGSQPLAA------------------SYKPIFQYLCE 100
++ +K+IVL C S +AA + + + C
Sbjct: 295 KDMVKKDIVLDDVRLYKMLMNCMAESGDVAAVNLLGNDMTRLCLMPENSVFGCMLKSFCI 354
Query: 101 HGKTRKAERVLRQI-MKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI 159
G+ ++A ++R + K +P + T++ G C+ G + E++ M RRD + +
Sbjct: 355 SGRIKEALELIRDLKYKDAVLEPEYFETLVRGLCKAGRISDALEIVEIMKRRDIVV-WNV 413
Query: 160 YDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML 219
+I+G+L+++ +A++ + M +S Y+P S++ ++ L + E+ + ML
Sbjct: 414 QGIIINGYLRRNDFCMALDVFQSMKESGYVPTVSSYTELIQHLFKLSRYEEACMMYDEML 473
Query: 220 DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG-------FCVKIEEVVQFLCKR 272
+ I+ +I T + +A++I + + +G + V I+E LCK
Sbjct: 474 GKGIKPDIVAMTAMVAGHVSQNRISEAWKIFKSMESQGIKATGKSYSVFIKE----LCKA 529
Query: 273 GKLPEARKLL 282
+ + K+L
Sbjct: 530 SRTDDIVKVL 539
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 16/286 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCS--AGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGD 61
DGG+SP T+ LI + C +D+ALK++ M N D + LC+ G
Sbjct: 756 DGGYSPSRSTYKYLIIALCGRKGRKIDDALKIYGEMVNSGHVPDKELIETYLGCLCEMGR 815
Query: 62 YDKAEKLFDELFEKEIVLCKFG-SQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGT 119
A K D L +FG + PL Y + LC GK +A +++ ++ ++
Sbjct: 816 ILDARKCIDS-------LQRFGYTVPLC--YSLFIRALCRAGKVEEALKLVEEVGAEKIN 866
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ L+Y +++ G ++G E + M + P + +Y LI F ++ A++
Sbjct: 867 VEKLTYGSIVHGLLQKGKLEEALTKVSRMKQEGITPTIHVYTSLIVHFFKQKHVEKAIQI 926
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
+ML+S Y P T+ +++ + G +++ V M + + + + L
Sbjct: 927 YAEMLESGYEPNVVTYSALIRGYMNVGRYNDAWNVFYRMKFKGPFPDFKTYSMFLSCLCK 986
Query: 240 HGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLL 282
G ++A ++ + + G + V L + GK AR +L
Sbjct: 987 AGRSEEAMRLISEMLESGIVPSTINFRTVFYGLNREGKQGLARVVL 1032
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 12/275 (4%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG--DYDKAEKLFD 70
T+ +I + G + A+ F+ MK+ + ++Y LI LC R D A K++
Sbjct: 730 TWTIMIMIYGRTGLTEMAMNCFKEMKDGGYSPSRSTYKYLIIALCGRKGRKIDDALKIYG 789
Query: 71 ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIM 130
E+ G P + LCE G+ A + + + + G PL Y I
Sbjct: 790 EMVNS-------GHVPDKELIETYLGCLCEMGRILDARKCIDSLQRFGYTVPLCYSLFIR 842
Query: 131 GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
CR G E +L+ + + Y ++ G LQK K A+ + +M + P
Sbjct: 843 ALCRAGKVEEALKLVEEVGAEKINVEKLTYGSIVHGLLQKGKLEEALTKVSRMKQEGITP 902
Query: 191 KTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV 250
+ S++ ++ ++ ++ ML+ N+ + I G + A+ +
Sbjct: 903 TIHVYTSLIVHFFKQKHVEKAIQIYAEMLESGYEPNVVTYSALIRGYMNVGRYNDAWNVF 962
Query: 251 ELLYKKGFCVKIEEVVQF---LCKRGKLPEARKLL 282
+ KG + F LCK G+ EA +L+
Sbjct: 963 YRMKFKGPFPDFKTYSMFLSCLCKAGRSEEAMRLI 997
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 10/221 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G++ C ++ I + C AG ++EALK+ E + ++ + +Y ++ L Q+G ++A
Sbjct: 830 GYTVPLC-YSLFIRALCRAGKVEEALKLVEEVGAEKINVEKLTYGSIVHGLLQKGKLEEA 888
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ ++ G P Y + + + KA ++ ++++ G + + ++
Sbjct: 889 LTKVSRMKQE-------GITPTIHVYTSLIVHFFKQKHVEKAIQIYAEMLESGYEPNVVT 941
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G+ G Y + + + M + PD + Y + + + AM + +ML
Sbjct: 942 YSALIRGYMNVGRYNDAWNVFYRMKFKGPFPDFKTYSMFLSCLCKAGRSEEAMRLISEML 1001
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQ 225
+S +P T + ++ L +G ARV + IR+
Sbjct: 1002 ESGIVPSTINFRTVFYGLNREG-KQGLARVVLQQKSELIRK 1041
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G+ P+ T++ LI + + G ++A VF MK D +YS+ + LC+ G +
Sbjct: 932 ESGYEPNVVTYSALIRGYMNVGRYNDAWNVFYRMKFKGPFPDFKTYSMFLSCLCKAGRSE 991
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ 113
+A +L E+ E IV P +++ +F L GK A VL+Q
Sbjct: 992 EAMRLISEMLESGIV-------PSTINFRTVFYGLNREGKQGLARVVLQQ 1034
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+T TFN ++ G + A KVF+ M +V SY+ LI L ++GD DKA
Sbjct: 177 GFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKA 236
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+L +++ K G + +Y + + LC GK +A++++ + RG + L
Sbjct: 237 MRLVEDMRRK-------GKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVN 289
Query: 126 MTVIMGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+V+M + G + L M +R PDV Y+ ++ ++ K A + L +M
Sbjct: 290 FSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQ 349
Query: 185 KSSYLPKTSTWHSILARLLEKG-FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
S P +T+ +L L G F + + +M R+ + + + LL G+
Sbjct: 350 ISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVVGLL-KSGNI 408
Query: 244 DKAFEIVELLYKKGFCVKIEE---VVQFLC 270
D + ++E + K+ +E V+++ C
Sbjct: 409 DGGYFVLEEMVKRKVDFDLESWEAVIKYAC 438
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 11/297 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
+FN L++ G EA FE ++ +++I+++ ++G+++ A K+FDE+
Sbjct: 149 SFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEM 208
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
E+++ QP SY + +L G KA R++ + ++G + + ++Y ++ G
Sbjct: 209 LERKV-------QPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEG 261
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C G YE +L+ M R P + + L++ ++ K AM +M K P
Sbjct: 262 LCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPD 321
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T++ + L ++G E+ ++ V M N ++ L +G + ++
Sbjct: 322 VVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLN 381
Query: 252 LLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
L++ C + +V L K G + +L +K + D++ AVI C
Sbjct: 382 LMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEAVIKYAC 438
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 139/346 (40%), Gaps = 35/346 (10%)
Query: 28 DEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPL 87
++AL +F + SY+ L+ L + ++ E + ++ +I
Sbjct: 63 EQALSLFHHYNQLGYKHYYPSYAALLYKLARSKNFHAVETILTQMKNTDI---------- 112
Query: 88 AASYKPIFQYLCEHGKTRKAERVLRQIMK----RGTQDPLSYMTVIMGH---CREG-AYE 139
+ +F L +H KA + R + K R Q + + +++ H C A+E
Sbjct: 113 -QCNETVFIALFQHYGPVKAVELFRAMPKFNCARTLQSFNALLNILVDHGMFCEANDAFE 171
Query: 140 NGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL 199
YE+ F P+ ++ ++ G+L+K + A + ++ML+ P +++S++
Sbjct: 172 RCYEM-------GFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLI 224
Query: 200 ARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV-ELLYK--K 256
L KG ++ R+ M + R N +E L G ++A +++ ++ Y+ K
Sbjct: 225 GFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCK 284
Query: 257 GFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
V ++ L KRGK+ EA L K D+ N + LC+ + EA+ +
Sbjct: 285 PQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKM 344
Query: 317 CYELVEKGLHQELTCLNDLVTALEARGKVEEA------AFISKRIP 356
E+ G L+ L G E F S+ P
Sbjct: 345 LVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCP 390
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+T TFN ++ G + A KVF+ M +V SY+ LI L ++GD DKA
Sbjct: 177 GFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKA 236
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+L +++ K G + +Y + + LC GK +A++++ + RG + L
Sbjct: 237 MRLVEDMRRK-------GKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVN 289
Query: 126 MTVIMGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+V+M + G + L M +R PDV Y+ ++ ++ K A + L +M
Sbjct: 290 FSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQ 349
Query: 185 KSSYLPKTSTWHSILARLLEKG-FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
S P +T+ +L L G F + + +M R+ + + + LL G+
Sbjct: 350 ISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVVGLL-KSGNI 408
Query: 244 DKAFEIVELLYKKGFCVKIEE---VVQFLC 270
D + ++E + K+ +E V+++ C
Sbjct: 409 DGGYFVLEEMVKRKVDFDLESWEAVIKYAC 438
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 11/297 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
+FN L++ G EA FE ++ +++I+++ ++G+++ A K+FDE+
Sbjct: 149 SFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEM 208
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
E+++ QP SY + +L G KA R++ + ++G + + ++Y ++ G
Sbjct: 209 LERKV-------QPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEG 261
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C G YE +L+ M R P + + L++ ++ K AM +M K P
Sbjct: 262 LCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPD 321
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T++ + L ++G E+ ++ V M N ++ L +G + ++
Sbjct: 322 VVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLN 381
Query: 252 LLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
L++ C + +V L K G + +L +K + D++ AVI C
Sbjct: 382 LMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEAVIKYAC 438
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 139/346 (40%), Gaps = 35/346 (10%)
Query: 28 DEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPL 87
++AL +F + SY+ L+ L + ++ E + ++ +I
Sbjct: 63 EQALSLFHHYNQLGYKHYYPSYAALLYKLARSKNFHAVETILTQMKNTDI---------- 112
Query: 88 AASYKPIFQYLCEHGKTRKAERVLRQIMK----RGTQDPLSYMTVIMGH---CREG-AYE 139
+ +F L +H KA + R + K R Q + + +++ H C A+E
Sbjct: 113 -QCNETVFIALFQHYGPVKAVELFRAMPKFNCARTLQSFNALLNILVDHGMFCEANDAFE 171
Query: 140 NGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL 199
YE+ F P+ ++ ++ G+L+K + A + ++ML+ P +++S++
Sbjct: 172 RCYEM-------GFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLI 224
Query: 200 ARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV-ELLYK--K 256
L KG ++ R+ M + R N +E L G ++A +++ ++ Y+ K
Sbjct: 225 GFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCK 284
Query: 257 GFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
V ++ L KRGK+ EA L K D+ N + LC+ + EA+ +
Sbjct: 285 PQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKM 344
Query: 317 CYELVEKGLHQELTCLNDLVTALEARGKVEEA------AFISKRIP 356
E+ G L+ L G E F S+ P
Sbjct: 345 LVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCP 390
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+T TFN ++ G + A KVF+ M +V SY+ LI L ++GD DKA
Sbjct: 177 GFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKA 236
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
+L +++ K G + +Y + + LC GK +A++++ + RG + L
Sbjct: 237 MRLVEDMRRK-------GKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVN 289
Query: 126 MTVIMGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+V+M + G + L M +R PDV Y+ ++ ++ K A + L +M
Sbjct: 290 FSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQ 349
Query: 185 KSSYLPKTSTWHSILARLLEKG-FPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
S P +T+ +L L G F + + +M R+ + + + LL G+
Sbjct: 350 ISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVVGLL-KSGNI 408
Query: 244 DKAFEIVELLYKKGFCVKIEE---VVQFLC 270
D + ++E + K+ +E V+++ C
Sbjct: 409 DGGYFVLEEMVKRKVDFDLESWEAVIKYAC 438
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 11/297 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
+FN L++ G EA FE ++ +++I+++ ++G+++ A K+FDE+
Sbjct: 149 SFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEM 208
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
E+++ QP SY + +L G KA R++ + ++G + + ++Y ++ G
Sbjct: 209 LERKV-------QPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEG 261
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C G YE +L+ M R P + + L++ ++ K AM +M K P
Sbjct: 262 LCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPD 321
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T++ + L ++G E+ ++ V M N ++ L +G + ++
Sbjct: 322 VVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLN 381
Query: 252 LLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
L++ C + +V L K G + +L +K + D++ AVI C
Sbjct: 382 LMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEAVIKYAC 438
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 139/346 (40%), Gaps = 35/346 (10%)
Query: 28 DEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPL 87
++AL +F + SY+ L+ L + ++ E + ++ +I
Sbjct: 63 EQALSLFHHYNQLGYKHYYPSYAALLYKLARSKNFHAVETILTQMKNTDI---------- 112
Query: 88 AASYKPIFQYLCEHGKTRKAERVLRQIMK----RGTQDPLSYMTVIMGH---CREG-AYE 139
+ +F L +H KA + R + K R Q + + +++ H C A+E
Sbjct: 113 -QCNETVFIALFQHYGPVKAVELFRAMPKFNCARTLQSFNALLNILVDHGMFCEANDAFE 171
Query: 140 NGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL 199
YE+ F P+ ++ ++ G+L+K + A + ++ML+ P +++S++
Sbjct: 172 RCYEM-------GFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLI 224
Query: 200 ARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV-ELLYK--K 256
L KG ++ R+ M + R N +E L G ++A +++ ++ Y+ K
Sbjct: 225 GFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCK 284
Query: 257 GFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
V ++ L KRGK+ EA L K D+ N + LC+ + EA+ +
Sbjct: 285 PQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKM 344
Query: 317 CYELVEKGLHQELTCLNDLVTALEARGKVEEA------AFISKRIP 356
E+ G L+ L G E F S+ P
Sbjct: 345 LVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCP 390
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 158/374 (42%), Gaps = 35/374 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ + + LI+ +C G + A +F + ++ + + L++ C +A
Sbjct: 92 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 151
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLS 124
D + G SY + LC+ G+TR A ++LRQI K + D +
Sbjct: 152 LHFHDHVLA-------LGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVM 204
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C++ + YEL M+ + P V + LI G+ + A L +M+
Sbjct: 205 YSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 264
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI--------------------R 224
+ P T++ ++ L ++G E+ +M+ + R
Sbjct: 265 LKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLYIISR 324
Query: 225 QNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKI-------EEVVQFLCKRGKLPE 277
+ + +S ++ + K + L+ + C +I ++ LCK G++
Sbjct: 325 MRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISY 384
Query: 278 ARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVT 337
A +L+ + DI N++I LC+ + V +A L ++ ++G+ ++ N L+
Sbjct: 385 AWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILID 444
Query: 338 ALEARGKVEEAAFI 351
L +G++++A I
Sbjct: 445 GLCKQGRLKDAQVI 458
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 157/371 (42%), Gaps = 35/371 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + ++ TLI+ C G AL++ ++ V+ D YS +I LC+ + A
Sbjct: 162 GFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDA 221
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
+L+ E+ K I P + + C G+ ++A +LR+ ++K D +
Sbjct: 222 YELYSEMITKRI-------SPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYT 274
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL------QKDKP----- 173
+ ++ C+EG + + M++ +PDV Y L+DG+ + P
Sbjct: 275 FNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLYIISRMRVAPNARSY 334
Query: 174 ------LLAMETLEKMLKSSY-------LPKTSTWHSILARLLEKGFPHESARVTVMMLD 220
++ ++K L Y P T T++S++ L + G + + M D
Sbjct: 335 SIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRD 394
Query: 221 RNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPE 277
+I I+ L + H DKA +V+ + +G + + ++ LCK+G+L +
Sbjct: 395 SGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKD 454
Query: 278 ARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVT 337
A+ + L +N+ + +I GLC + EA L ++ + G + ++
Sbjct: 455 AQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIR 514
Query: 338 ALEARGKVEEA 348
AL K E A
Sbjct: 515 ALFENDKNERA 525
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 130/322 (40%), Gaps = 20/322 (6%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SP T N+LI+ +C G EA + M + D +++IL+ LC+ G +A+
Sbjct: 233 ISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAK 292
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM 126
V+ K G P +Y + C + +R R + SY
Sbjct: 293 -------SGIAVMMKEGVMPDVVTYSSLMDGYCLYIISRM----------RVAPNARSYS 335
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
VI G C+ + L M R PD Y+ LIDG + + A E +++M S
Sbjct: 336 IVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDS 395
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
T++S++ L + ++ + + D+ I+ ++ I+ L G A
Sbjct: 396 GQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDA 455
Query: 247 FEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
I + L KG+ + + ++ LC G L EA LL N D C +I
Sbjct: 456 QVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRA 515
Query: 304 LCEINRVLEAFGLCYELVEKGL 325
L E ++ A L E++ +GL
Sbjct: 516 LFENDKNERAEKLLREMIARGL 537
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+PDT T+N+LI C +G + A ++ + M++ AD +Y+ LI LC+ DKA
Sbjct: 362 IAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAI 421
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SY 125
L ++ ++ I L + +Y + LC+ G+ + A+ + + ++ +G + +Y
Sbjct: 422 ALVKKIKDQGIQLDMY-------TYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTY 474
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C EG LL M +PD + +I + DK A + L +M+
Sbjct: 475 TIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIA 534
Query: 186 SSYL 189
L
Sbjct: 535 RGLL 538
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 28/143 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G D T+N+LI + C ++D+A+ + + +K+ + D +Y+ILI LC++G
Sbjct: 394 DSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLK 453
Query: 64 KAEKLFDELF-------------------------EKEIVLCKF---GSQPLAASYKPIF 95
A+ +F +L E E +L K G P A + + I
Sbjct: 454 DAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETII 513
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
+ L E+ K +AE++LR+++ RG
Sbjct: 514 RALFENDKNERAEKLLREMIARG 536
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 153/390 (39%), Gaps = 56/390 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD + L+H +C++ N D+AL V+++M + + + +S ++ L + G +
Sbjct: 325 GLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEV 384
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+F+E E + + + +Y +F LC+ GK A +L ++ D
Sbjct: 385 VDMFEEFKESGLFIDR-------KAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKH 437
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G+ +G L M R F PDV Y+ L GF + AM+ L M
Sbjct: 438 YTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYME 497
Query: 185 KSSYLPKTSTWHSILARLLEKG-----------FPHESARVTV----------------- 216
P ++T I+ L G ES ++V
Sbjct: 498 SQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIE 557
Query: 217 -------------MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CV 260
ML+ N++ + + +K L +G+ + A + L GF V
Sbjct: 558 KSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAV 617
Query: 261 KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL--GLCEINRVLEAFGLCY 318
++ CK LPEA + LF + D I+ G C++N + EA L
Sbjct: 618 TYTIMINGYCKTNCLPEAHE--LFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFK 675
Query: 319 ELVEKGLHQELTCLNDLVTALEARGKVEEA 348
++ E+G+ ++ ++ L G E A
Sbjct: 676 DMKERGIKPDVIAYTVIIKGLLNSGHTEIA 705
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 153/370 (41%), Gaps = 20/370 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +FN LI+ +D AL +F K+F + + +Y+I+I+ LC++GD++ ++
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
FDE+ E G + Y + LC++ ++ VL+ R +Y
Sbjct: 248 FDEMKEA-------GVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTA 300
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
VI G C E + + + M ++ +PDV +Y L+ G+ A+ + M+
Sbjct: 301 VIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRG 360
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH----GHR 243
+ IL L E G A V M + + + K+ +LF G
Sbjct: 361 IKTNCVIFSCILHCLDEMG----RALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKV 416
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCK---RGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
D A +++ L V ++ + +GK EA+ L + D+ N +
Sbjct: 417 DDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVL 476
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
G EA L + +G+ T ++ L + GKVEEA + G E+
Sbjct: 477 AAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKG-ES 535
Query: 361 LDRSVLSYSS 370
++ SV Y++
Sbjct: 536 VEISVEIYTA 545
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 2/216 (0%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P++ T +I CSAG ++EA + F +K V Y+ L+ C+ +K+
Sbjct: 500 GVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKS 559
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+L E F + + +P Y IF LC +G A + + G T D ++
Sbjct: 560 HEL-KEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVT 618
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G+C+ +EL M R PD Y +I+G+ + + A E + M
Sbjct: 619 YTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMK 678
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLD 220
+ P + I+ LL G + ++ M+D
Sbjct: 679 ERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMID 714
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF+PD T+ +I+ +C L EA ++F++MK +T D+ +Y+I+I C+ +A
Sbjct: 611 GFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREA 670
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+LF ++ E+ G +P +Y I + L G T A ++ +++ G
Sbjct: 671 HELFKDMKER-------GIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMG 716
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 150/358 (41%), Gaps = 12/358 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK + P+T T+N LI C AGN+D+A ++F M Q+ + + + L+ +C+ G
Sbjct: 305 MKTEKKNKPNTITYNCLIDGFCKAGNIDKARELFGLMNEEQIQPNVVTLNTLVDGMCKIG 364
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
A + F+E+ K G + A +Y + C KA + +++ G +
Sbjct: 365 RVFSAVEFFNEMKGK-------GLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSGCS 417
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D + Y +I G G + ++ + R F D Y+ LI GF +K K E
Sbjct: 418 PDAIVYYCLISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERVYEM 477
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L +M ++ P T++++++ L + G + +V M+ ++ ++ I
Sbjct: 478 LNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAYCL 537
Query: 240 HGHRDKAFEIVELLYKKGFC----VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
+ D+A +I + V ++ LCK + A L+ +
Sbjct: 538 KKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSLMDDMKVKGVQPNTT 597
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
NA+ G+ + + +AF L +VE + + + L L A G++E+ K
Sbjct: 598 TYNAIFKGVQDKRMLHKAFELMDRMVEDACNPDYVTMEILTEWLSAIGEIEKLKLFVK 655
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 148/352 (42%), Gaps = 19/352 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVT-ADSASYSILIRNLCQRGDYDK 64
G PD +NTLI+ C G +E L + E MK + ++ +Y+ LI C+ G+ DK
Sbjct: 274 GVEPDVVLYNTLINGLCKVGREEEGLNLLEEMKTEKKNKPNTITYNCLIDGFCKAGNIDK 333
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A +LF + E++I QP + + +C+ G+ A ++ +G + + +
Sbjct: 334 ARELFGLMNEEQI-------QPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAV 386
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I C + + ML PD +Y CLI G + A + ++
Sbjct: 387 TYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQL 446
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
++ + ++ +++ +K + M + ++ +I + L G
Sbjct: 447 KRAGFGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDF 506
Query: 244 DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL----LFSLKNHHNVDIDL 296
A ++++ + K+G V V+ C + + EA K+ S+ + V +
Sbjct: 507 ATATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTV---I 563
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N +I LC+ N V A L ++ KG+ T N + ++ + + +A
Sbjct: 564 YNILIDALCKNNDVERAVSLMDDMKVKGVQPNTTTYNAIFKGVQDKRMLHKA 615
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 138/354 (38%), Gaps = 54/354 (15%)
Query: 27 LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQP 86
++E L E MK + ++ ILI C+ D+A +FD+L K G +P
Sbjct: 221 MNELLAEMEEMK---IHPSVITFGILINQFCKSRRIDEALGVFDKLRGKGREKKWIGVEP 277
Query: 87 LAASYKPIFQYLCEHGKTRKAERVLRQIM--KRGTQDPLSYMTVIMGHCREGAYENGYEL 144
Y + LC+ G+ + +L ++ K+ + ++Y +I G C+ G + EL
Sbjct: 278 DVVLYNTLINGLCKVGREEEGLNLLEEMKTEKKNKPNTITYNCLIDGFCKAGNIDKAREL 337
Query: 145 LIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLE 204
M P+V + L+DG + + A+E +M
Sbjct: 338 FGLMNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEFFNEM--------------------- 376
Query: 205 KGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKG------- 257
KG + ++ N T I G + DKA + + + G
Sbjct: 377 KG--------------KGLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIV 422
Query: 258 -FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
+C ++ L G++ +A ++ + +D N +I G C+ ++ + +
Sbjct: 423 YYC-----LISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERVYEM 477
Query: 317 CYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
E+ E G+ ++ N LV+ L G A + K++ E L SV++Y +
Sbjct: 478 LNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIK-EGLKPSVVTYGA 530
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 143/349 (40%), Gaps = 29/349 (8%)
Query: 2 KGDGGF-SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
K DG + + ++T+I S C + EA +++ M +V+ D ++S LI C G
Sbjct: 178 KIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVG 237
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK---- 116
+ +A LF E+ I P ++ + LC+ G T++ + VL +MK
Sbjct: 238 QFKEAFGLFHEMVLTNI-------NPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQ 290
Query: 117 --------------RGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDC 162
R T D SY +I C+ + L M + PD Y
Sbjct: 291 VNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSS 350
Query: 163 LIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN 222
LIDG + ++ A E L++M T+ S L L + ++ + + D+
Sbjct: 351 LIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQG 410
Query: 223 IRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEAR 279
I+ NIN I+ L G + A I + L KG+ V + ++ LC G EA
Sbjct: 411 IQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAM 470
Query: 280 KLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQE 328
LL N D+ +I L + + +A L E++ +GL +E
Sbjct: 471 TLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEE 519
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 145/354 (40%), Gaps = 37/354 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT T TLI C G + EAL +++ + SY ILI LC+ G+ A
Sbjct: 113 GYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAA 172
Query: 66 ----EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQ 120
K+ +L +V+ Y I LC+ +A + Q I+K+ +
Sbjct: 173 LQVLRKIDGKLVNTNVVM-----------YSTIIDSLCKEKLVTEAYELYSQMIVKKVSP 221
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
D +++ +I G C G ++ + L M+ + PDV ++ L+D ++ L
Sbjct: 222 DVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVL 281
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
M+K E +++ V ++ R + +++ T I+ L
Sbjct: 282 AVMMK------------------EVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKI 323
Query: 241 GHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC 297
D+A + + KG V ++ LCK ++ A +LL D+
Sbjct: 324 KMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITY 383
Query: 298 NAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
+ + LC+ ++V +A L ++ ++G+ + N L+ L G+ E A I
Sbjct: 384 TSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVI 437
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 7/216 (3%)
Query: 140 NGYELLIWMLRR----DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTW 195
N Y + I + R P + ++ +I+ + + A L K+LK Y P T T
Sbjct: 62 NNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITL 121
Query: 196 HSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYK 255
+++ L G HE+ ++ R R N I L G A +++ +
Sbjct: 122 TTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDG 181
Query: 256 KGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLE 312
K V ++ LCK + EA +L + + D+ +A+I G C + + E
Sbjct: 182 KLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKE 241
Query: 313 AFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
AFGL +E+V ++ ++ N LV AL G +E
Sbjct: 242 AFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKET 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+ + +H+ C +D+A+ + + +K+ + + +Y+ILI LC+ G ++ A
Sbjct: 375 GQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENA 434
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ +F +L K G + +Y + LC G +A +L ++ G T D ++
Sbjct: 435 QVIFQDLLIK-------GYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVT 487
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPD-VEI 159
Y T+I + +LL M+ R L + VEI
Sbjct: 488 YETIIRALFKNDENHKAEKLLREMIARGLLEEKVEI 523
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NTLI +C G EAL V + M+ + D SY+ LI C+ G +A
Sbjct: 230 GVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREA 289
Query: 66 EKLFDEL----------------------FE-----KEIVLCKFGSQPLAASYKPIFQYL 98
++F E+ FE +E+++ K G P +Y I + L
Sbjct: 290 MRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAK-GLYPGVVTYNSILRKL 348
Query: 99 CEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV 157
C G+ R A ++L ++ +R Q D ++ T+I +C+ G + + ML P+
Sbjct: 349 CSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNS 408
Query: 158 EIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL 199
Y LI GF + + A E L ML + + P T+ I+
Sbjct: 409 FTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIV 450
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 134/345 (38%), Gaps = 77/345 (22%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + D ++N+LI+ C G + EA+++F +K+ + +Y+ LI C+ ++++A
Sbjct: 265 GINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKD--AIPNHVTYTTLIDGYCKANEFEEA 322
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L +E+++ K G P +Y I + LC G+ R A ++L ++ +R Q D ++
Sbjct: 323 LRL------REMMVAK-GLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVT 375
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T+I +C+ G + + ML P+ Y LI GF + + A E L ML
Sbjct: 376 CNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGML 435
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ + P T+ I+ +K + D
Sbjct: 436 DAGFSPNYRTYSWIVDSYCKKD-----------------------------------NTD 460
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
+ + KGFC+ +I L A+I L
Sbjct: 461 AVLALPDEFLSKGFCL--------------------------------NISLYRALIRRL 488
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
C+I R+ A L Y + KG+ + L + G A+
Sbjct: 489 CKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAAS 533
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 135/327 (41%), Gaps = 20/327 (6%)
Query: 11 TCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFD 70
CT L++S G KV++ M V + Y+ LI + D ++AE + +
Sbjct: 167 ACT--VLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILN 224
Query: 71 ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVI 129
E+ K +V P +Y + C+ G +A V ++ + G D +SY ++I
Sbjct: 225 EMEVKGVV-------PDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLI 277
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
G C+EG + + +D +P+ Y LIDG+ + ++ A+ E M+
Sbjct: 278 YGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLY 335
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P T++SIL +L G ++ ++ M +R ++ + I G + A +
Sbjct: 336 PGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKF 395
Query: 250 VELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
+ + G + ++ CK +L A++LL L + + + ++ C+
Sbjct: 396 KTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCK 455
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLN 333
+ L E + KG CLN
Sbjct: 456 KDNTDAVLALPDEFLSKGF-----CLN 477
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 10/186 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G +P++ T+ LIH C L+ A ++ M + + + +YS ++ + C++ + D
Sbjct: 401 EAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTD 460
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
L DE K L + Y+ + + LC+ + AE++L + +G + D
Sbjct: 461 AVLALPDEFLSKGFCLN-------ISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDS 513
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCL--IDGFLQKDKPLLAMETL 180
+ Y ++ + + G ++L M RR + V+IY C +D K + +
Sbjct: 514 VIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIYRCFSALDASQNKVSQMFWDHVV 573
Query: 181 EKMLKS 186
E+ L S
Sbjct: 574 ERGLMS 579
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 147/346 (42%), Gaps = 15/346 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T+N+L++ + ++ A +VF+ MK + D +Y+ +I+ C+ G KA ++
Sbjct: 210 PSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAIEM 269
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
E+ E++ +P SY + Q G + ++ +G + P Y
Sbjct: 270 VREM---EVI----NLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSL 322
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
VI G C+ G GY L M+R + +Y LID + + A+ E+M
Sbjct: 323 VICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDG 382
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ +I+ L + G E+ + + N + I+ L G D+A
Sbjct: 383 IEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEAE 442
Query: 248 EIVELLYKKG-----FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
++ + + +KG +C ++ LCK G++ +A L+ ++ + +I
Sbjct: 443 KVFDEMAEKGCPPDSYCYN--ALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILIS 500
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
L ++R EA + +++KG+ + C L L GKV A
Sbjct: 501 ELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARA 546
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 142/345 (41%), Gaps = 46/345 (13%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
N+LI S +AG ++E L V+ M + +Y+ L+ L + AE++FD + E
Sbjct: 181 NSLIKSFGNAGLVNELLFVWRGMNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKE 240
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHC 133
++P +Y + + C+ GKTRKA ++R++ + D +SYMTV+
Sbjct: 241 GR-------TKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACY 293
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTS 193
EG + L M + F Y +I G + K L E M+++
Sbjct: 294 AEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNG------ 347
Query: 194 TWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELL 253
+ N + T I+ G+ D A + E +
Sbjct: 348 -----------------------------CKGNKAVYTALIDCYGKSGNSDGALRLFERM 378
Query: 254 YKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRV 310
G V +V LCK G++ EA F +N V+ +++I GL + RV
Sbjct: 379 KMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRV 438
Query: 311 LEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
EA + E+ EKG + C N L+ L G++++A + KR+
Sbjct: 439 DEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRM 483
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 10/251 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK DG PD T++ +++ C +G ++EAL F+ V ++ YS LI L + G
Sbjct: 378 MKMDG-IEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAG 436
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+AEK+FDE+ EK G P + Y + LC+ G+ A +++++ + G +
Sbjct: 437 RVDEAEKVFDEMAEK-------GCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCE 489
Query: 121 DPLSYMTVIMGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ T+++ R E ++ M+ + P+V + L G K A +
Sbjct: 490 QTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKV 549
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L+++ + +T+ + ++ L + G E+ ++ ++DR + T I L
Sbjct: 550 LDELAPMGVVLETA-YEDMIGALCKAGRVKEACKLADGIVDRGREIPGKIRTVMIHSLRK 608
Query: 240 HGHRDKAFEIV 250
G+ D A +++
Sbjct: 609 AGNADLAIKLM 619
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 163/385 (42%), Gaps = 30/385 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+G PD T+NT+I +C AG +A+++ M+ + D SY +++ GD D
Sbjct: 240 EGRTKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVD 299
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
L+ E+ +K G + + Y + LC+ GK + + +++ G + +
Sbjct: 300 FCLSLYHEMEDK-------GFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNK 352
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y +I + + G + L M PD Y +++G + + A+ +
Sbjct: 353 AVYTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQF 412
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
++ + + S++ L + G E+ +V M ++ + I+ L G
Sbjct: 413 CNENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGR 472
Query: 243 RDKAFEIVELLYKKG-------FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
D A +V+ + + G F + I E+ F R + EA K+ + ++
Sbjct: 473 IDDALALVKRMERDGCEQTVYTFTILISEL--FRVHRNE--EAVKMWDLMIDKGITPNVA 528
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFIS--- 352
A+ +GLC +V A + EL G+ E T D++ AL G+V+EA ++
Sbjct: 529 CFRALSIGLCLSGKVARACKVLDELAPMGVVLE-TAYEDMIGALCKAGRVKEACKLADGI 587
Query: 353 ----KRIPGLENLDRSVLSYSSKKS 373
+ IPG R+V+ +S +K+
Sbjct: 588 VDRGREIPG---KIRTVMIHSLRKA 609
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 147/346 (42%), Gaps = 15/346 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P T+N+L++ + ++ A +VF+ MK + D +Y+ +I+ C+ G KA ++
Sbjct: 210 PSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAIEM 269
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
E+ E++ +P SY + Q G + ++ +G + P Y
Sbjct: 270 VREM---EVI----NLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSL 322
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
VI G C+ G GY L M+R + +Y LID + + A+ E+M
Sbjct: 323 VICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDG 382
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ +I+ L + G E+ + + N + I+ L G D+A
Sbjct: 383 IEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEAE 442
Query: 248 EIVELLYKKG-----FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
++ + + +KG +C ++ LCK G++ +A L+ ++ + +I
Sbjct: 443 KVFDEMAEKGCPPDSYCYN--ALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILIS 500
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
L ++R EA + +++KG+ + C L L GKV A
Sbjct: 501 ELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARA 546
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 142/345 (41%), Gaps = 46/345 (13%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
N+LI S +AG ++E L V+ M + +Y+ L+ L + AE++FD + E
Sbjct: 181 NSLIKSFGNAGLVNELLFVWRGMNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKE 240
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHC 133
++P +Y + + C+ GKTRKA ++R++ + D +SYMTV+
Sbjct: 241 GR-------TKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACY 293
Query: 134 REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTS 193
EG + L M + F Y +I G + K L E M+++
Sbjct: 294 AEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNG------ 347
Query: 194 TWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELL 253
+ N + T I+ G+ D A + E +
Sbjct: 348 -----------------------------CKGNKAVYTALIDCYGKSGNSDGALRLFERM 378
Query: 254 YKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRV 310
G V +V LCK G++ EA F +N V+ +++I GL + RV
Sbjct: 379 KMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRV 438
Query: 311 LEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
EA + E+ EKG + C N L+ L G++++A + KR+
Sbjct: 439 DEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRM 483
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 10/251 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK DG PD T++ +++ C +G ++EAL F+ V ++ YS LI L + G
Sbjct: 378 MKMDG-IEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAG 436
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+AEK+FDE+ EK G P + Y + LC+ G+ A +++++ + G +
Sbjct: 437 RVDEAEKVFDEMAEK-------GCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCE 489
Query: 121 DPLSYMTVIMGHC-REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+ T+++ R E ++ M+ + P+V + L G K A +
Sbjct: 490 QTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKV 549
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L+++ + +T+ + ++ L + G E+ ++ ++DR + T I L
Sbjct: 550 LDELAPMGVVLETA-YEDMIGALCKAGRVKEACKLADGIVDRGREIPGKIRTVMIHSLRK 608
Query: 240 HGHRDKAFEIV 250
G+ D A +++
Sbjct: 609 AGNADLAIKLM 619
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 163/385 (42%), Gaps = 30/385 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+G PD T+NT+I +C AG +A+++ M+ + D SY +++ GD D
Sbjct: 240 EGRTKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVD 299
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
L+ E+ +K G + + Y + LC+ GK + + +++ G + +
Sbjct: 300 FCLSLYHEMEDK-------GFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNK 352
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y +I + + G + L M PD Y +++G + + A+ +
Sbjct: 353 AVYTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQF 412
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
++ + + S++ L + G E+ +V M ++ + I+ L G
Sbjct: 413 CNENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGR 472
Query: 243 RDKAFEIVELLYKKG-------FCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
D A +V+ + + G F + I E+ F R + EA K+ + ++
Sbjct: 473 IDDALALVKRMERDGCEQTVYTFTILISEL--FRVHRNE--EAVKMWDLMIDKGITPNVA 528
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFIS--- 352
A+ +GLC +V A + EL G+ E T D++ AL G+V+EA ++
Sbjct: 529 CFRALSIGLCLSGKVARACKVLDELAPMGVVLE-TAYEDMIGALCKAGRVKEACKLADGI 587
Query: 353 ----KRIPGLENLDRSVLSYSSKKS 373
+ IPG R+V+ +S +K+
Sbjct: 588 VDRGREIPG---KIRTVMIHSLRKA 609
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 8/253 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SPD T+NTL++ G L EA+ +F M + D +++IL+ LC+ G+ KA
Sbjct: 150 ISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKAR 209
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSY 125
+ V+ K P +Y + + KA V + +RG T D SY
Sbjct: 210 NVL-------AVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSY 262
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+ + LL M + P+ Y LIDG + + A + + +M
Sbjct: 263 SVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHN 322
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
T++S+L L + ++ + + D+ I+ +I T ++ L +G
Sbjct: 323 RGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKD 382
Query: 246 AFEIVELLYKKGF 258
A E+ ++L KG+
Sbjct: 383 AQEVYQILLIKGY 395
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 132/287 (45%), Gaps = 12/287 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ ++T+I+S C + +A ++ M +++ D +Y+ L+ G +A L
Sbjct: 117 PNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGL 176
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
F+++ K I +P ++ + LC+ G+ +KA VL ++K+ D ++Y +
Sbjct: 177 FNQMLLKNI-------KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNS 229
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+ + M RR PDV Y +I+G + A+ L++M S
Sbjct: 230 LMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKS 289
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T T+ S++ L + G ++ + M +R ++ ++ L + DKA
Sbjct: 290 MAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAI 349
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL-LFSLKNHH 290
++ + +G I +V LCK G+L +A+++ + +K +H
Sbjct: 350 TLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYH 396
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 155/355 (43%), Gaps = 21/355 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--------KNFQVTADSASYSILIRNLC 57
G D N L++ C G + KV E + K FQ+ + SY LI LC
Sbjct: 38 GIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQL--NQVSYGTLIDGLC 95
Query: 58 QRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMK 116
+ G+ A ++ + + +V QP Y I LC+ A + Q ++K
Sbjct: 96 KAGETRAAMQVLRNI-DGLLV------QPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLK 148
Query: 117 RGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA 176
R + D ++Y T++ G G + L ML ++ PD+ ++ L+DG ++ + A
Sbjct: 149 RISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKA 208
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIEL 236
L M+K S P T++S++ +++ V M R + +++ + I
Sbjct: 209 RNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMING 268
Query: 237 LFGHGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVD 293
L D+A +++ ++ K V ++ L K G++ +A L+ D
Sbjct: 269 LCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPAD 328
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ N+++ LC+ ++V +A L ++ ++G+ ++ LV L G++++A
Sbjct: 329 VITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDA 383
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D T+N+L+ + C +D+A+ + +K+ + D +Y+IL+ LC+ G A
Sbjct: 324 GQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDA 383
Query: 66 EKLF----------DELFEKEIVLCK----FGSQPLAASYKPIFQYLCEHGKTRKAERVL 111
++++ D LF+K + L G P +++ + + L E+ KA +L
Sbjct: 384 QEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELL 443
Query: 112 RQIMKRG 118
R+++ RG
Sbjct: 444 REMIARG 450
>Medtr1g008310.1 | PPR containing plant-like protein | HC |
chr1:854624-850741 | 20130731
Length = 636
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 8/212 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF P+ FN LI+ + D +V MK FQ+ D +YS ++ Q G D
Sbjct: 313 DLGFKPNLLVFNVLINGFVDRMDRDGVDEVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQD 372
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
K +++FD + + G +P +Y + + +T KAE +L +++ G + +
Sbjct: 373 KCKQIFDNMLQS-------GVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNV 425
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+++ VI G G +N ++ M P++ ++ LI G+ + D+P + E L+
Sbjct: 426 VTFTNVISGWGSSGRMDNAIKIFDKMCELGVSPNLRTFEALIWGYAKADQPWKSEEILQL 485
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
M + PK ST+ + G E+ R+
Sbjct: 486 MEEFHVHPKKSTFLLVSKAWRFAGLTEEAIRL 517
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 131/287 (45%), Gaps = 18/287 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDY 62
+ GF P T T++ LI + G EA+K+ + M + D +Y++LI+ LCQ G+
Sbjct: 172 ESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNM 231
Query: 63 DKAEKLFDELFEKEIVLCKF---GSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT 119
+A ++CK G P + ++ + + +T +AE ++ ++ ++G
Sbjct: 232 SEAWN----------IVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGL 281
Query: 120 Q-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+ + ++ ++ G+ +EG + + + + F P++ +++ LI+GF+ + E
Sbjct: 282 EPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDE 341
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
L M + P T+ +I+ + GF + ++ ML ++ +++ + ++
Sbjct: 342 VLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYV 401
Query: 239 GHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLL 282
+KA E++ + + G V V+ G++ A K+
Sbjct: 402 RSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIF 448
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 8/214 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ TF +++ + G + EAL+ +K+ + +++LI R D D
Sbjct: 280 GLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGV 339
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+++ + E +I QP +Y I + G K +++ +++ G + D +
Sbjct: 340 DEVLRLMKEFQI-------QPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHA 392
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G+ R E ELL M+ P+V + +I G+ + A++ +KM
Sbjct: 393 YSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDKMC 452
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
+ P T+ +++ + P +S + +M
Sbjct: 453 ELGVSPNLRTFEALIWGYAKADQPWKSEEILQLM 486
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 10/259 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M DG PD T+N LI + C +GN+ EA + M + DS +++ +
Sbjct: 205 MLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNS 264
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+ +AE + E+ K G +P ++ I + G+ ++A + + +I G +
Sbjct: 265 ETAEAEAMILEMQRK-------GLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFK 317
Query: 121 DPLSYMTVIMGHCREGAYENGY-ELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
L V++ + +G E+L M PDV Y +++ + Q +
Sbjct: 318 PNLLVFNVLINGFVDRMDRDGVDEVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQI 377
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM-MLDRNIRQNINLSTKSIELLF 238
+ ML+S P + SIL + + E A + M++ +R N+ T I
Sbjct: 378 FDNMLQSGVKPDVHAY-SILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWG 436
Query: 239 GHGHRDKAFEIVELLYKKG 257
G D A +I + + + G
Sbjct: 437 SSGRMDNAIKIFDKMCELG 455
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ ++N +I+ C ++EA +F++M + +T D+ SY+ LI LC+ G
Sbjct: 197 GVTPELHSYNVMINGLCKNKMVNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDV 256
Query: 66 EKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
L DE+ + QP+ +Y + LC++ + KA +L+++ +G Q +
Sbjct: 257 WDLIDEMHNR--------CQPVNVITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMY 308
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++ G C+ G + E+ +L + + +V +Y+ +++ F ++ A+ L KM
Sbjct: 309 TYTILVDGLCKNGRLADAREIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKM 368
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+ P T+ +++ L E ++ ++ M+ R +
Sbjct: 369 EDNGCTPDAITYQTLICALFENNKNDKAVKLLREMIVRGL 408
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 133/336 (39%), Gaps = 16/336 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D N L++ C G L+ A V + D+ + + LI+ LC+ G +
Sbjct: 73 GIQTDIVNLNILVNCFCQLGQLNYAFSVLAKILKMGYQPDTVTLTTLIKGLCRSGQIEGL 132
Query: 66 ---------EKLFDELFEKEI---VLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ 113
+ D L + ++ V+ K G +P +Y + + KA +
Sbjct: 133 LVKPNVVMYSTIIDSLCKDKLSGAVMIKQGVEPNVVTYTSLMDGYFLVKEVNKATYIFNT 192
Query: 114 IMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDK 172
I +RG L SY +I G C+ L M R+ PD Y+ LIDG +
Sbjct: 193 IAQRGVTPELHSYNVMINGLCKNKMVNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGS 252
Query: 173 PLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTK 232
+ +++M T++S+L L + ++ + M D+ I+ N+ T
Sbjct: 253 ISDVWDLIDEMHNRCQPVNVITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTI 312
Query: 233 SIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNH 289
++ L +G A EI L KG+ + + +V CK G EA LL N
Sbjct: 313 LVDGLCKNGRLADAREIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNG 372
Query: 290 HNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
D +I L E N+ +A L E++ +GL
Sbjct: 373 CTPDAITYQTLICALFENNKNDKAVKLLREMIVRGL 408
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+ L+ C G L +A +++ ++ + + Y++++ C+ G +D
Sbjct: 300 DQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFD 359
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+A L ++ + G P A +Y+ + L E+ K KA ++LR+++ RG
Sbjct: 360 EALSLLSKMEDN-------GCTPDAITYQTLICALFENNKNDKAVKLLREMIVRG 407
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 147/354 (41%), Gaps = 18/354 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T + LI+S C L+ A + + ++ + + LI LC G KA
Sbjct: 98 GIQPDIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKA 157
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D + K G SY + LC+ G+T+ A ++L +I + D +
Sbjct: 158 LYFHDHVIAK-------GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVM 210
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF--LQKDKPLL-----AM 177
Y T+I C++ +GY+L M+ P+V Y+ LI GF L + K + A
Sbjct: 211 YNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGEVKKAR 270
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
L M+K P T+ S++ +++ + + R + N+ I L
Sbjct: 271 YVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGL 330
Query: 238 FGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
+ D+A + + ++ K V ++ LCK G++ + + DI
Sbjct: 331 CKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDI 390
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N++ GLC+ ++V A L ++ ++G+ + L L G++E+A
Sbjct: 391 ITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDA 444
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ ++N +I+ C +DEA+ +F+ M + + ++ +Y+ LI LC+ G
Sbjct: 315 GVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDV 374
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
DE+ ++ G +Y +F LC++ + +A +L++I +G Q + S
Sbjct: 375 WDFIDEMHDR-------GQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYS 427
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y + +G C+ G E+ E+ + + + D ++Y +I+G ++ A+ L KM
Sbjct: 428 YTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMK 487
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+ P T+ I+ L E ++ + M+ R +
Sbjct: 488 DNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 152/356 (42%), Gaps = 7/356 (1%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + ++ LI+ C +G AL++ E +K F V D Y+ +I LC+
Sbjct: 168 GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDG 227
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLS 124
L+ E+ +I L + + Q G+ +KA VL ++K R D ++
Sbjct: 228 YDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVT 287
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ G+ L + R P+V Y+ +I+G + A+ ++M
Sbjct: 288 YSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMH 347
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+P T T++S++ L + G + M DR +I + L + D
Sbjct: 348 SKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVD 407
Query: 245 KAFEIVELLYKKGFCVKIEEVVQF---LCKRGKLPEARKLLL-FSLKNHHNVDIDLCNAV 300
+A +++ + +G + LCK G+L +A+++ ++K +H +D + +
Sbjct: 408 RAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYH-LDAKMYTVM 466
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA-FISKRI 355
I GLC+ EA L ++ + G + ++ AL + ++A FI + I
Sbjct: 467 INGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMI 522
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P ++ L C G L++A +V+ ++ D+ Y+++I LC+ G +D
Sbjct: 418 DQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFD 477
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+A L ++ + G P +Y+ I + L E + KA + +R+++ RG
Sbjct: 478 EALSLLSKMKDN-------GCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARG 525
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 147/354 (41%), Gaps = 18/354 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T + LI+S C L+ A + + ++ + + LI LC G KA
Sbjct: 98 GIQPDIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKA 157
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D + K G SY + LC+ G+T+ A ++L +I + D +
Sbjct: 158 LYFHDHVIAK-------GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVM 210
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF--LQKDKPLL-----AM 177
Y T+I C++ +GY+L M+ P+V Y+ LI GF L + K + A
Sbjct: 211 YNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGEVKKAR 270
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
L M+K P T+ S++ +++ + + R + N+ I L
Sbjct: 271 YVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGL 330
Query: 238 FGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDI 294
+ D+A + + ++ K V ++ LCK G++ + + DI
Sbjct: 331 CKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDI 390
Query: 295 DLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N++ GLC+ ++V A L ++ ++G+ + L L G++E+A
Sbjct: 391 ITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDA 444
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ ++N +I+ C +DEA+ +F+ M + + ++ +Y+ LI LC+ G
Sbjct: 315 GVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDV 374
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
DE+ ++ G +Y +F LC++ + +A +L++I +G Q + S
Sbjct: 375 WDFIDEMHDR-------GQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYS 427
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y + +G C+ G E+ E+ + + + D ++Y +I+G ++ A+ L KM
Sbjct: 428 YTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMK 487
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
+ P T+ I+ L E ++ + M+ R +
Sbjct: 488 DNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 152/356 (42%), Gaps = 7/356 (1%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + ++ LI+ C +G AL++ E +K F V D Y+ +I LC+
Sbjct: 168 GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDG 227
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLS 124
L+ E+ +I L + + Q G+ +KA VL ++K R D ++
Sbjct: 228 YDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVT 287
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +++ G+ L + R P+V Y+ +I+G + A+ ++M
Sbjct: 288 YSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMH 347
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+P T T++S++ L + G + M DR +I + L + D
Sbjct: 348 SKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVD 407
Query: 245 KAFEIVELLYKKGFCVKIEEVVQF---LCKRGKLPEARKLLL-FSLKNHHNVDIDLCNAV 300
+A +++ + +G + LCK G+L +A+++ ++K +H +D + +
Sbjct: 408 RAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYH-LDAKMYTVM 466
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA-FISKRI 355
I GLC+ EA L ++ + G + ++ AL + ++A FI + I
Sbjct: 467 INGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMI 522
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P ++ L C G L++A +V+ ++ D+ Y+++I LC+ G +D
Sbjct: 418 DQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFD 477
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+A L ++ + G P +Y+ I + L E + KA + +R+++ RG
Sbjct: 478 EALSLLSKMKDN-------GCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARG 525
>Medtr1g010020.2 | PPR containing plant-like protein | HC |
chr1:1683287-1686329 | 20130731
Length = 589
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 11/281 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+G +PD TL+ ++ G ++AL ++ M D +Y++LI +C+
Sbjct: 266 NGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMH 325
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDP 122
A E+ +K ++ P +Y + LC+ GK +A + + K R D
Sbjct: 326 LAYGYACEMLKKGLI-------PDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQ 378
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY +I G C G +LL+ ML +P I++ +ID + + + A T ++
Sbjct: 379 ISYKMMIHGLCLNGDVLRAKDLLLCMLNNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQ 438
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
ML S LP T+++++ L+ G H + + M +N+R ++ I G
Sbjct: 439 MLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGD 498
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARK 280
D A ++ + + ++G + E ++ C G + EA +
Sbjct: 499 LDLAHQLCDEMVQRGREPDLITCTEFIRGYCIIGNIEEAEE 539
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 147/347 (42%), Gaps = 8/347 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+NTLI + + N ++A +F M N + + + +I++R LC++G +KA
Sbjct: 195 GPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKA 254
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ D++ + + L AS + Y ++GK+ +A + +++++ T+ D ++
Sbjct: 255 RNMLDKILNDD---NGEATPDLVASTTLMDNYF-KNGKSNQALGLWNEMIQKCTKVDVVA 310
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G CR Y ML++ +PDV Y+ LI ++ K A M
Sbjct: 311 YNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEACYLFGVMS 370
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K +P ++ ++ L G + + + ML+ + + I+
Sbjct: 371 KMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCMLNNFMVPQAIIWNLIIDSYGRCEDLR 430
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
AF + + G + ++ K G + A L + D+ N +I
Sbjct: 431 NAFLTRDQMLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLI 490
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G I + A LC E+V++G +L + + G +EEA
Sbjct: 491 GGAINIGDLDLAHQLCDEMVQRGREPDLITCTEFIRGYCIIGNIEEA 537
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 35/287 (12%)
Query: 71 ELFEKEIVLCKFGSQPLAASYKPI-----FQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
++ + I L K G A Y + ++LC GK A + ++M++G D +
Sbjct: 108 KIMRENISLVKIGLHGYAFEYNNVENAATIRFLCLEGKLAAAWWLRIKMMEKGVLPDVYT 167
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++ G C G EN L+ ML+ P+ Y+ LI G+ A + M
Sbjct: 168 HNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMS 227
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T + I+ L EKG E AR MLD+ + + +T +L+ D
Sbjct: 228 NTGIQPNRVTCNIIVRALCEKGHL-EKAR---NMLDKILNDDNGEATP--DLVASTTLMD 281
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
F K GK +A L ++ VD+ N +I G+
Sbjct: 282 NYF-----------------------KNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGV 318
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
C ++ A+G E+++KGL ++ N L+ AL GK+ EA ++
Sbjct: 319 CRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEACYL 365
>Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:44584-42871 | 20130731
Length = 443
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 130/323 (40%), Gaps = 40/323 (12%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SPD TFN+LI+ C G L EA +F M + + +++IL+ LC+ G+ A+
Sbjct: 156 ISPDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAK 215
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSY 125
L LA K + + KA+ VL I + G D SY
Sbjct: 216 NL------------------LAMMMKQV-------NEVNKAKHVLSTITQMGVPPDAQSY 250
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+ + L M R P+ Y LIDG + + A E +++M
Sbjct: 251 NIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRD 310
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+ P T++S++ L + H + + M NI I+ L G
Sbjct: 311 NGQQPDICTYNSLIDALCKN--HHVDQGIQLDMYTYNIL---------IDGLCKQGRLKD 359
Query: 246 AFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
A I + L KG+ + + ++ LC G L EA LL N D C +I
Sbjct: 360 AQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEALLSKMEDNGCVPDAVTCETIIR 419
Query: 303 GLCEINRVLEAFGLCYELVEKGL 325
L E ++ A L E++ +GL
Sbjct: 420 ALFENDKNERAEKLLREMIVRGL 442
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 154/350 (44%), Gaps = 40/350 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T TFNTLI+ C G EAL ++M + +Y+ILI LC+ G +A
Sbjct: 50 GHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQVTYAILINGLCKMGKTTEA 109
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
+ ++ K + + + I LC+ +A + Q I+K+ + D ++
Sbjct: 110 LQFLRKIDGKLVNIN-------VLMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVT 162
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++I G C G + L M+ ++ P+V ++ L+D ++ A L M+
Sbjct: 163 FNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAMMM 222
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K + + + +L+ + + G P ++ +M IN K I+++ +
Sbjct: 223 KQ--VNEVNKAKHVLSTITQMGVPPDAQSYNIM---------INGFCK-IKMV------N 264
Query: 245 KAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
+AF + + +G V ++ LCK G++ A +L+ N DI N++I
Sbjct: 265 EAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNGQQPDICTYNSLI 324
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
LC+ + V++G+ ++ N L+ L +G++++A I
Sbjct: 325 DALCKNHH-----------VDQGIQLDMYTYNILIDGLCKQGRLKDAQVI 363
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 39/143 (27%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD CT+N+LI + C ++D+ +++ D +Y+ILI LC++G
Sbjct: 310 DNGQQPDICTYNSLIDALCKNHHVDQGIQL-----------DMYTYNILIDGLCKQGRLK 358
Query: 64 KAEKLFDELF-------------------------EKEIVLCKF---GSQPLAASYKPIF 95
A+ +F +L E E +L K G P A + + I
Sbjct: 359 DAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEALLSKMEDNGCVPDAVTCETII 418
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
+ L E+ K +AE++LR+++ RG
Sbjct: 419 RALFENDKNERAEKLLREMIVRG 441
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 175 LAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI 234
A K+LK + P T T+++++ + G E+ ML ++N T +I
Sbjct: 38 FAFSIFAKILKLGHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHVF--HLNQVTYAI 95
Query: 235 ELLFGHGHRDKAFEIVELLYK-KGFCVKIE-----EVVQFLCKRGKLPEARKLLLFSLKN 288
L+ G K E ++ L K G V I ++ LCK + EA +L +
Sbjct: 96 -LINGLCKMGKTTEALQFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQMIVK 154
Query: 289 HHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ D+ N++I G C + +++EAFGL +E+V K ++ + N LV AL G V+ A
Sbjct: 155 KISPDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGA 214
Query: 349 ----AFISKRIPGLENLDRSVLSYSSKKSRPNKA 378
A + K++ + N + VLS ++ P A
Sbjct: 215 KNLLAMMMKQVNEV-NKAKHVLSTITQMGVPPDA 247
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 32/277 (11%)
Query: 81 KFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYE 139
K G P ++ + +C +GK ++A ++ + ++Y +I G C+ G
Sbjct: 48 KLGHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQVTYAILINGLCKMGKTT 107
Query: 140 NGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL 199
+ L + + +V +++ +ID ++ A E +M+ P T++S++
Sbjct: 108 EALQFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLI 167
Query: 200 ------ARLLEK-GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVEL 252
+L+E G HE M+ +NI N+ ++ L G+ A ++ +
Sbjct: 168 YGFCFVGQLIEAFGLFHE-------MVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAM 220
Query: 253 LYKKGFCV-KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVL 311
+ K+ V K + V+ + + G P+A+ N +I G C+I V
Sbjct: 221 MMKQVNEVNKAKHVLSTITQMGVPPDAQSY----------------NIMINGFCKIKMVN 264
Query: 312 EAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
EAF L E+ +G+ + L+ L G++ A
Sbjct: 265 EAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYA 301
>Medtr6g075180.1 | PPR containing plant-like protein | HC |
chr6:27846701-27844575 | 20130731
Length = 524
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMK---NFQVTADSASYSILIRNLCQRGDY 62
G PD T+NT + ++C G + +A+++FE M+ + + + SYSILI L Q
Sbjct: 253 GHKPDNFTYNTALDTYCKEGMITDAVELFEFMRTKGSIISSPTAKSYSILIVALVQN--- 309
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
D+ E+ F + + G P +YK I + +C GK +A + L ++ K+G D
Sbjct: 310 DRMEECFKFMGH----MISSGCLPDVTTYKDIIEGMCLCGKIDEAYKFLEEMGKKGYPPD 365
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+++ + C E +L M+ +P V+ Y+ LI F + D P A ET
Sbjct: 366 IVTHNCFLKVLCHNKKSEEALKLYGRMIELSCIPSVQTYNMLISMFFKMDDPDGAFETWH 425
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
+M K P T T+ ++E F A ++L+ I + I L + + L
Sbjct: 426 EMEKRGCRPDTDTY----GVMIEGLFNCNKAEDACILLEEVINKGIKLPYRKFDSLL 478
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 8/278 (2%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ T+N L+ C N +KV E M D+ +Y+ + C+ G A +
Sbjct: 220 NPNGDTYNILVFGWCRVRNPSRGMKVLEEMIQLGHKPDNFTYNTALDTYCKEGMITDAVE 279
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYM 126
LF+ + K ++ S P A SY + L ++ + + + + ++ G D +Y
Sbjct: 280 LFEFMRTKGSII----SSPTAKSYSILIVALVQNDRMEECFKFMGHMISSGCLPDVTTYK 335
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G C G + Y+ L M ++ + PD+ ++C + K A++ +M++
Sbjct: 336 DIIEGMCLCGKIDEAYKFLEEMGKKGYPPDIVTHNCFLKVLCHNKKSEEALKLYGRMIEL 395
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
S +P T++ +++ + P + M R R + + IE LF + A
Sbjct: 396 SCIPSVQTYNMLISMFFKMDDPDGAFETWHEMEKRGCRPDTDTYGVMIEGLFNCNKAEDA 455
Query: 247 FEIVELLYKKGFCV---KIEEVVQFLCKRGKLPEARKL 281
++E + KG + K + ++ L + G L KL
Sbjct: 456 CILLEEVINKGIKLPYRKFDSLLMQLSEIGNLQAIHKL 493
>Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:38145334-38144441 | 20130731
Length = 297
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 133/305 (43%), Gaps = 17/305 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T N LI+ +C + A +F + + + + L++ LC GD KA
Sbjct: 5 GIRPDIVTINILINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGDVQKA 64
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
F + IV P ++ C G ++A+ +L +M +G + + ++
Sbjct: 65 LH-----FHENIV------NPDVCTFNIFIDEFCLQGNMKEAKNILGVMMIQGMKPNVVT 113
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ G+C M+ DV Y+ +I+GF + A++ E+M
Sbjct: 114 YSALMDGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMY 173
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR- 243
+ +P T+++++ L + G + ++ M D + ++ S F H+
Sbjct: 174 SKNIIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPAD-EITYNSFLHTFCKNHQL 232
Query: 244 DKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
DKA +V+ ++ +G V + ++ L K G+L +A+++ L +NVD+ +
Sbjct: 233 DKAIALVKEIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQQIFKDLLIKGYNVDVVTYKYM 292
Query: 301 ILGLC 305
I GLC
Sbjct: 293 ISGLC 297
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 17/285 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G+ P +N +++ A L A +++E MKN V +Y L+ C+ +
Sbjct: 247 DLGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVE 306
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
KA ++ E+ K G +P A Y PI L E G+ ++A ++ + L
Sbjct: 307 KALEMVGEM-------TKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTL 359
Query: 124 S-YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
S Y +++ G C+ G E ++L M+ R FLP Y+ F + K M K
Sbjct: 360 STYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTK 419
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M++S + P T+H +L L E+ + +V++ M + ++ ST LL
Sbjct: 420 MIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHK 479
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQF------LCKRGKLPEARKL 281
++AF E + ++G I + + F L K+G ARKL
Sbjct: 480 LEEAFAEFEDMIRRGI---IPQYLTFQKLNVELKKQGMNEMARKL 521
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 153/364 (42%), Gaps = 53/364 (14%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSAS----YSILIRNLCQRGDYDKAEKL 68
TF +I + AG A++ FE K+ + DS S + ILI +LC+ G +A +
Sbjct: 180 TFAIIIRRYARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSAREASEY 239
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYM 126
L KE L G P Y + K + AER+ + MK P ++Y
Sbjct: 240 L--LRRKETDL---GWVPSIRVYNIMLNGWFRARKLKHAERLWEE-MKNENVRPSVVTYG 293
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
T++ G+CR E E++ M + P+ +Y+ +ID + + A+ +E+
Sbjct: 294 TLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVL 353
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN--------------------IRQN 226
P ST++S++ + G ++++ M+ R + +
Sbjct: 354 QIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEG 413
Query: 227 INLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSL 286
+NL TK IE GH + +V ++ LC+ KL A ++ +
Sbjct: 414 MNLYTKMIE--SGHNPDRLTYHLV---------------LKMLCEEEKLELAVQVSM--E 454
Query: 287 KNHHNVDIDLCNAVILG--LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGK 344
H D+DL + +L LC+++++ EAF +++ +G+ + L L+ +G
Sbjct: 455 MRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKLNVELKKQGM 514
Query: 345 VEEA 348
E A
Sbjct: 515 NEMA 518
>Medtr1g010020.1 | PPR containing plant-like protein | HC |
chr1:1683523-1688017 | 20130731
Length = 726
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 11/279 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+G +PD TL+ ++ G ++AL ++ M D +Y++LI +C+
Sbjct: 247 NGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMH 306
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDP 122
A E+ +K ++ P +Y + LC+ GK +A + + K R D
Sbjct: 307 LAYGYACEMLKKGLI-------PDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQ 359
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+SY +I G C G +LL+ ML +P I++ +ID + + + A T ++
Sbjct: 360 ISYKMMIHGLCLNGDVLRAKDLLLCMLNNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQ 419
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
ML S LP T+++++ L+ G H + + M +N+R ++ I G
Sbjct: 420 MLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGD 479
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEA 278
D A ++ + + ++G + E ++ C G + EA
Sbjct: 480 LDLAHQLCDEMVQRGREPDLITCTEFIRGYCIIGNIEEA 518
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 147/347 (42%), Gaps = 8/347 (2%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ T+NTLI + + N ++A +F M N + + + +I++R LC++G +KA
Sbjct: 176 GPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKA 235
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ D++ + + L AS + Y ++GK+ +A + +++++ T+ D ++
Sbjct: 236 RNMLDKILNDD---NGEATPDLVASTTLMDNYF-KNGKSNQALGLWNEMIQKCTKVDVVA 291
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G CR Y ML++ +PDV Y+ LI ++ K A M
Sbjct: 292 YNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEACYLFGVMS 351
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
K +P ++ ++ L G + + + ML+ + + I+
Sbjct: 352 KMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCMLNNFMVPQAIIWNLIIDSYGRCEDLR 411
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVI 301
AF + + G + ++ K G + A L + D+ N +I
Sbjct: 412 NAFLTRDQMLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLI 471
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
G I + A LC E+V++G +L + + G +EEA
Sbjct: 472 GGAINIGDLDLAHQLCDEMVQRGREPDLITCTEFIRGYCIIGNIEEA 518
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 35/287 (12%)
Query: 71 ELFEKEIVLCKFGSQPLAASYKPI-----FQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
++ + I L K G A Y + ++LC GK A + ++M++G D +
Sbjct: 89 KIMRENISLVKIGLHGYAFEYNNVENAATIRFLCLEGKLAAAWWLRIKMMEKGVLPDVYT 148
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
+ ++ G C G EN L+ ML+ P+ Y+ LI G+ A + M
Sbjct: 149 HNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMS 208
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T + I+ L EKG E AR MLD+ + + +T +L+ D
Sbjct: 209 NTGIQPNRVTCNIIVRALCEKGHL-EKAR---NMLDKILNDDNGEATP--DLVASTTLMD 262
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
F K GK +A L ++ VD+ N +I G+
Sbjct: 263 NYF-----------------------KNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGV 299
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
C ++ A+G E+++KGL ++ N L+ AL GK+ EA ++
Sbjct: 300 CRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEACYL 346
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+T ++NTLI C +G L A K+ + M++ + +Y+ L+ LC+ DKA L
Sbjct: 393 PNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIAL 452
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-LSYMT 127
+ ++ G QP +Y + LC+ G+ + A+ + + ++ +G P +Y
Sbjct: 453 VNNFKDQ-------GIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNI 505
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDK 172
+I G C EG + LL M +PDV Y +I +KD+
Sbjct: 506 MINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDE 550
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 133/347 (38%), Gaps = 81/347 (23%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+T T TLI C G ++EAL +++ + +Y ILI LC+
Sbjct: 221 GYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKM------ 274
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLS 124
G+TR A +VLRQI K + +
Sbjct: 275 ------------------------------------GQTRAALQVLRQIEGKLVNTNVVM 298
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y TVI G C++ + Y L M+ + P V + A +M+
Sbjct: 299 YSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTFK--------------AFSLFHEMV 344
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++ ++ L + G E+ V + M+D + +NL T+
Sbjct: 345 LKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVD----EALNLFTE------------ 388
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ K V ++ CK G+L A KLL ++ N+++ L
Sbjct: 389 --------MHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHAL 440
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
C+ + V +A L ++G+ ++ N LV L +G++++A I
Sbjct: 441 CKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLI 487
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 104/233 (44%), Gaps = 4/233 (1%)
Query: 29 EALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEI-VLCKFGSQPL 87
+A +F M + + +++IL+ LC+ G +A+ + ++ ++ + + + +P
Sbjct: 335 KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPN 394
Query: 88 AASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSYMTVIMGHCREGAYENGYELL 145
SY + C+ G+ A ++L Q+ RG Q P ++Y +++ C+ + L+
Sbjct: 395 TVSYNTLIDGFCKSGRLSHAWKLLDQMRDRG-QPPNVITYNSLLHALCKNHHVDKAIALV 453
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
+ PD+ Y+ L+DG ++ + A + +L Y T T++ ++ L +
Sbjct: 454 NNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLE 513
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF 258
G E+ + M D ++ I LF DKA ++V L +G
Sbjct: 514 GLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVRGL 566
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 136/337 (40%), Gaps = 43/337 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + T+ LI+ C G AL+V ++ V + YS +I LC+ A
Sbjct: 256 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDA 315
Query: 66 EKLFDELFEKEI--VLCKFGS------------QPLAASYKPIFQYLCEHGKTRKAERVL 111
L+ E+ K I + F + P ++ + LC+ GK ++A+ V+
Sbjct: 316 YGLYSEMIVKRIPPTVVTFKAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVI 375
Query: 112 RQIMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKD 171
+++ + L+ T + HC+ P+ Y+ LIDGF +
Sbjct: 376 IKMV----DEALNLFTEM--HCK--------------------PNTVSYNTLIDGFCKSG 409
Query: 172 KPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ A + L++M P T++S+L L + ++ + D+ I+ +++
Sbjct: 410 RLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYN 469
Query: 232 KSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKN 288
++ L G A I + L KG+ + ++ LC G L EA LL N
Sbjct: 470 TLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDN 529
Query: 289 HHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
D+ +I L E + +A L EL+ +GL
Sbjct: 530 GCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVRGL 566
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 28/143 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+N+L+H+ C ++D+A+ + N K+ + D +Y+ L+ LC++G
Sbjct: 423 DRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLK 482
Query: 64 KAEKLFDELF-------------------------EKEIVLCKF---GSQPLAASYKPIF 95
A+ +F +L E E +L K G P +Y+ I
Sbjct: 483 DAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTII 542
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
L E + KAE+++R+++ RG
Sbjct: 543 HALFEKDENDKAEKLVRELIVRG 565
>Medtr5g089850.1 | PPR containing protein | HC |
chr5:39081850-39080081 | 20130731
Length = 502
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 52/298 (17%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +F+++I G L AL FE MK + D+ Y+ILI C+ D A
Sbjct: 206 GVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGA 265
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
K+ +E+ E+ V+ +Y + LC A+ + +++++RG D +
Sbjct: 266 LKVRNEMVERSCVMD-------VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYT 318
Query: 125 YMTVIMGHCREGAYENGYELL--------------IW--MLRRDFLPDVEIYDCLIDGF- 167
T+I G+C++G L +W M+ R+ P + LI+GF
Sbjct: 319 LTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISREIFPHYISFSILINGFC 378
Query: 168 -------------LQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK--------- 205
L+ A + L M+ P T+++++ RLL
Sbjct: 379 SLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINRLLPDLVTYNAILG 438
Query: 206 GFP-----HESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF 258
GF E+ V M+D+ I + + T I + +AF + + + ++GF
Sbjct: 439 GFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEAFRVHDEMLQRGF 496
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 33/345 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD TFN ++ ++ EA +VF M V D S+S +I + G+ +A
Sbjct: 171 GFCPDAATFNPVLVESFRKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRA 230
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
F+++ G P Y + C + A +V ++++R D ++
Sbjct: 231 LAYFEKM-------KGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVT 283
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM- 183
Y T++ G CR ++ EL M+ R PD LI G+ + A+ E +
Sbjct: 284 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETIT 343
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
L+S W +++R + FPH ++ +L I +L S L+ G+
Sbjct: 344 LRSEMEKAKELWRDMISREI---FPH---YISFSIL---INGFCSLGLVSESLIKGY--- 391
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+ G K + + + G P+ + +L N D+ NA++ G
Sbjct: 392 ----------LRAGNVSKANDFLNTMVSEGVPPDC--ITYNTLINRLLPDLVTYNAILGG 439
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
R+ EA + +++++KG++ + + ++ ++ ++EA
Sbjct: 440 FSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEA 484
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 125/294 (42%), Gaps = 12/294 (4%)
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
+Y+ LI LC+ G Y+ A+ + D++ G P AA++ P+ +A
Sbjct: 143 TYNALINGLCKEGGYESAKCVLDKML-------GVGFCPDAATFNPVLVESFRKEDVWEA 195
Query: 108 ERVLRQIMKRGT-QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
ERV ++++ G D +S+ ++I R G M +PD IY LI+G
Sbjct: 196 ERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 255
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+ + + A++ +M++ S + T++++L L ++ + M++R + +
Sbjct: 256 YCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 315
Query: 227 INLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSL 286
T I G+ KA + E + + K +E+ + + R P + FS+
Sbjct: 316 FYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISREIFPH---YISFSI 372
Query: 287 KNHHNVDIDLCN-AVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
+ + L + ++I G V +A +V +G+ + N L+ L
Sbjct: 373 LINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINRL 426
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 55/214 (25%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T TLIH +C GN+ +AL +FE + R + +KA
Sbjct: 311 GVFPDFYTLTTLIHGYCKDGNMTKALSLFET-------------------ITLRSEMEKA 351
Query: 66 EKLFDELFEKEIV------------LCKFG--SQPLAASYKPIFQYLCEHGKTRKAERVL 111
++L+ ++ +EI C G S+ L Y G KA L
Sbjct: 352 KELWRDMISREIFPHYISFSILINGFCSLGLVSESLIKGY-------LRAGNVSKANDFL 404
Query: 112 RQIMKRGTQ---------------DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPD 156
++ G D ++Y ++ G R G + +L M+ + PD
Sbjct: 405 NTMVSEGVPPDCITYNTLINRLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPD 464
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
Y +I+G++ KD A ++ML+ ++P
Sbjct: 465 KSTYTSVINGYVSKDNMKEAFRVHDEMLQRGFVP 498
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+PDT T+N+LI C +G + + + + M N AD +Y+ L+ LC+ DKA
Sbjct: 264 MAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAI 323
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
L ++ ++ G QP +Y + LC++G+ + A+ V + ++ +G D Y
Sbjct: 324 TLLTKIKDQ-------GIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYHLDVKMY 376
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ G C+EG +++ L+ M P+ Y+ LI + K ++ L +M+
Sbjct: 377 SVMVNGLCKEGLFDDALSLVSKMEDNSCTPNAVTYETLIRALFENGKNDKTVKLLREMI 435
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 11/278 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+ TLIH C G EA+ + M ++ D +++ L+ LC+ G+ +A +
Sbjct: 126 PDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDGLCKEGEVKQARNV 185
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
V+ K G P +Y + + KA V I + G + SY
Sbjct: 186 L-------AVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGVIPSVQSYSV 238
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C++ + L + ++ PD Y+ LIDG + + + +++M
Sbjct: 239 MINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIG 298
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
T++S+L L + ++ + + D+ I+ N+ T ++ L +G A
Sbjct: 299 QPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQ 358
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
+ + L KG+ + ++ +V LCK G +A L+
Sbjct: 359 VVYQNLLIKGYHLDVKMYSVMVNGLCKEGLFDDALSLV 396
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 155/368 (42%), Gaps = 26/368 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D + LI+ C G+L+ A V + D+ + + +++ +C G KA
Sbjct: 5 GIQTDVVNSSILINCFCHLGHLNYAFSVLTKILKLGFEPDTITLTTVMKGMCLTGQVRKA 64
Query: 66 EKLFDELFEKEIVLCKFGSQPLAAS------YKPIFQYLCEHGKTRKAERVLRQ-IMKRG 118
D + K L L ++ + + LC++ A + + I+KR
Sbjct: 65 LHFHDHVIAKGFKLNHVTFMGLWSTDYVNLEKQELPCSLCKNKLIIDASALCSEMIVKRI 124
Query: 119 TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
D ++Y T+I G C G ++ LL ML ++ DV+ ++ L+DG ++ + A
Sbjct: 125 FPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDGLCKEGEVKQARN 184
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
L M+K P T+ S L++ F + + + R + S +S ++
Sbjct: 185 VLAVMIKQGVDPDIFTYIS----LMDGYFLVKEVNKATYVFNTIARSGVIPSVQSYSVMI 240
Query: 239 G----HGHRDKAFEIVELLYKKGFC---VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHN 291
D+A + + L K + ++ LCK G++ + L + HN
Sbjct: 241 NGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDL----IDEMHN 296
Query: 292 V----DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
+ D+ N+++ LC+ ++V +A L ++ ++G+ + LV L G++++
Sbjct: 297 IGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKD 356
Query: 348 AAFISKRI 355
A + + +
Sbjct: 357 AQVVYQNL 364
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 162/368 (44%), Gaps = 29/368 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENM--KNFQVTAD------SASYSILIR--- 54
GF PDT T T++ C G + +AL +++ K F++ S Y L +
Sbjct: 40 GFEPDTITLTTVMKGMCLTGQVRKALHFHDHVIAKGFKLNHVTFMGLWSTDYVNLEKQEL 99
Query: 55 --NLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLR 112
+LC+ A L E+ K I P +Y + C G+ ++A +L
Sbjct: 100 PCSLCKNKLIIDASALCSEMIVKRIF-------PDVVTYTTLIHGFCIVGQFKEAVGLLN 152
Query: 113 Q-IMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKD 171
Q ++K + D ++ T++ G C+EG + +L M+++ PD+ Y L+DG+
Sbjct: 153 QMLLKNISLDVQTFNTLVDGLCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVK 212
Query: 172 KPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLST 231
+ A + +S +P ++ ++ L +K E+ + + +N+ +
Sbjct: 213 EVNKATYVFNTIARSGVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYN 272
Query: 232 KSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKN 288
I+ L G +++++ ++ G + ++ LCK ++ +A LL +K+
Sbjct: 273 SLIDGLCKSGRISDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLLT-KIKD 331
Query: 289 HHNVDIDLCNAVIL--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVE 346
+ ++ IL GLC+ R+ +A + L+ KG H ++ + +V L G +
Sbjct: 332 Q-GIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYHLDVKMYSVMVNGLCKEGLFD 390
Query: 347 EA-AFISK 353
+A + +SK
Sbjct: 391 DALSLVSK 398
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+ L+ C G L +A V++N+ D YS+++ LC+ G +D
Sbjct: 331 DQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYHLDVKMYSVMVNGLCKEGLFD 390
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
A L ++ + P A +Y+ + + L E+GK K ++LR+++ RG
Sbjct: 391 DALSLVSKMEDNS-------CTPNAVTYETLIRALFENGKNDKTVKLLREMIVRG 438
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 142/332 (42%), Gaps = 32/332 (9%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
+ +NT+I+ C ++++A ++ M + ++ + +YS LI G A LF
Sbjct: 202 NAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLF 261
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTV 128
+++ + I +P ++ + C+ K ++ + V +MK+G D ++Y ++
Sbjct: 262 NKIILENI-------KPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSL 314
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
+ G+C + M + PD+ Y+ LI+GF + K AM +M +
Sbjct: 315 MDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNI 374
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
+P T++S++ L + G + ++ M DR + NI I+ LF DKA
Sbjct: 375 IPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIA 434
Query: 249 IVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
++ +G + ++ LCK +++ ++ N +I G C
Sbjct: 435 LITKFKDQGIQPSMYTYTILIDGLCKV---------------EGYDITVNTYNVMIHGFC 479
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVT 337
+ EA L ++ ++ +C+ + VT
Sbjct: 480 KKGLFDEALSLLSKM------KDSSCIPNAVT 505
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 28/239 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N+L+ +C ++ A +F M V D SY+ILI C+ DKA
Sbjct: 303 GIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 362
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
LF+E+ K I+ P +Y + L + G+ A +++ Q+ RG + L+
Sbjct: 363 MNLFNEMHCKNII-------PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILT 415
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLID------------------- 165
Y ++I + + L+ + P + Y LID
Sbjct: 416 YNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMI 475
Query: 166 -GFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNI 223
GF +K A+ L KM SS +P T+ + LL+ ++ ++ M+ R +
Sbjct: 476 HGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 534
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 146/334 (43%), Gaps = 16/334 (4%)
Query: 27 LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQP 86
L A VF + ++ + + LI+ LC +G +A D+ L G
Sbjct: 114 LSLAFSVFAKILKMGYHPNTITLNTLIKGLCLKGQIHQAFLFHDK-------LVALGFHL 166
Query: 87 LAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELL 145
SY + LC+ G+TR A +L+++ + Q + + Y TVI G C++ + ++L
Sbjct: 167 DQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLY 226
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
M+ + P+V Y LI GF K A++ K++ + P T++ ++ +
Sbjct: 227 SEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKD 286
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE- 264
E V MM+ + I ++ ++ + A I + + G I
Sbjct: 287 RKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSY 346
Query: 265 --VVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNAVILGLCEINRVLEAFGLCYEL 320
++ CK K+ +A LF+ + N+ ++ N++I GL + R+ A L ++
Sbjct: 347 NILINGFCKIKKVDKAMN--LFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 404
Query: 321 VEKGLHQELTCLNDLVTALEARGKVEEA-AFISK 353
++G+ + N ++ AL +V++A A I+K
Sbjct: 405 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITK 438
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ T+N +IH C G DEAL + MK+ ++ +Y I IR+L + DKA
Sbjct: 463 GYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKA 522
Query: 66 EKLFDELFEKEIVLCKFGSQPLAA 89
EKLF E+ + + L + S P ++
Sbjct: 523 EKLFREMITRGL-LNRSASYPCSS 545
>Medtr4g094688.1 | PPR containing plant protein | HC |
chr4:38731040-38725816 | 20130731
Length = 1086
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 10/284 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
DG DT T+N+LI + G +A +++E+M+ D ++Y ++I NL + G D
Sbjct: 245 DGCCEVDTETYNSLITLFLNKGLPYKAFEIYESMEKANCKLDISTYELMIPNLAKSGRLD 304
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
A KLF E+ ++ +P + + + + G+ A ++ ++ G + P
Sbjct: 305 AAFKLFQEMKGRDF-------RPGLNIFASLVDSMGKAGRLDSAMKIYMEMRGYGYRPPP 357
Query: 124 S-YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ Y+++I + + G E L M F P+ +Y +I+ + K +AM
Sbjct: 358 TIYVSLIESYVKSGKLETALRLWDEMKLAGFRPNFGLYTLIIESHAKSGKLDIAMSAFSD 417
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M K+ +LP ST+ +L G + ++ M + +R ++ T + LL
Sbjct: 418 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLSLLANKKL 477
Query: 243 RDKAFEIVELLYKKGFCVKI--EEVVQFLCKRGKLPEARKLLLF 284
D A +++ + G+ V + +V+ K G + A + L F
Sbjct: 478 VDVAAKVLLEMKTMGYSVDVTASDVLMVYIKEGSVDLALRWLRF 521
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GF P+ + +I SH +G LD A+ F +M+ ++Y+ L+ G D
Sbjct: 386 AGFRPNFGLYTLIIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDH 445
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
A KL++ + G +P ++Y + L A +VL ++ G ++
Sbjct: 446 AMKLYNSM-------TNAGLRPGLSTYTVLLSLLANKKLVDVAAKVLLEMKTMGYSVDVT 498
Query: 125 YMTVIMGHCREGAYENGYELLIWM----LRRDFLPDVEIYD-CLIDGFLQKDKPLLAMET 179
V+M + +EG+ + L +M +R + ++++ C+ +G + KPL
Sbjct: 499 ASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKNGIYESAKPL----- 553
Query: 180 LEKMLKSSYLPKTSTWHSILARLL 203
LE + S+ + SILA L+
Sbjct: 554 LETYVNSAAKVDLILYTSILAHLV 577
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 143/338 (42%), Gaps = 14/338 (4%)
Query: 24 AGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFG 83
AG + A + + ++N D +Y+ LI +G Y+ A +F+++ + G
Sbjct: 219 AGRVSSAASLLKTLENDGFEIDVYAYTCLITAYASKGRYNDAVSVFNKM-------QRDG 271
Query: 84 SQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG--TQDPLSYMTVIMGHCREGA-YEN 140
P +Y I + G + + MK D +Y T+I CR G+ YE
Sbjct: 272 CTPTLVTYNSILNVYGKMGMSWSRVTAIFDSMKTNGVVPDLYTYNTLITC-CRRGSLYEE 330
Query: 141 GYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILA 200
+ + F+PD Y+ L+D F + +P A++ L+ M + + P T++S+++
Sbjct: 331 VVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLIS 390
Query: 201 RLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCV 260
+ G+ E++R+ V M+++ I+ ++ T + G + AFE+ + + G
Sbjct: 391 AHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKP 450
Query: 261 KI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLC 317
I +++ RG E K+ + + DI N ++ E G+
Sbjct: 451 NICTFNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVF 510
Query: 318 YELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
E+ G E N L++A G ++A + K +
Sbjct: 511 KEMKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSM 548
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 154/346 (44%), Gaps = 44/346 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GFSP T+N+LI +H G L+EA ++ M + D +Y+ L+ + G + A
Sbjct: 377 GFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFA 436
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+++DE+ G +P ++ + + G + +V +I + G + D ++
Sbjct: 437 FEVYDEMKAA-------GCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVT 489
Query: 125 YMTV--IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ T+ + GH + + G + M R F+P+ + ++ LI + + AM +
Sbjct: 490 WNTLLAVFGHNQMDSEVAG--VFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKS 547
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
ML+S P ST++++LA L GF +S ++ M D R N L+ S+ + +G
Sbjct: 548 MLESGVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPN-ELTYSSLLHAYANG- 605
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
K E ++ L ++ + IE L + L+L S K+ DL
Sbjct: 606 --KEIERMKALGEEIYSGSIETHPVLL---------KTLVLVSSKS------DL------ 642
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
L E R +EL E+G+ LT LN +++ + V +A
Sbjct: 643 -LMETERAF------FELKERGITPGLTTLNAMISIYGRKQVVSKA 681
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 138/321 (42%), Gaps = 38/321 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ TFNTLI ++ G+ D+A+ V+++M V+ D ++Y+ ++ L + G ++++
Sbjct: 517 GFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQS 576
Query: 66 EKLFDELFE--------------------KEIVLCK-FGSQPLAASY-------KPIFQY 97
EK+ E+ + KEI K G + + S K +
Sbjct: 577 EKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEIYSGSIETHPVLLKTLVLV 636
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMG-HCREGAYENGYELLIWMLRRDFLPD 156
+ + ER ++ +RG L+ + ++ + R+ E+L +M F P
Sbjct: 637 SSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPS 696
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y+ L+ + + DK + E L ++LK P ++++++ G E+ R+
Sbjct: 697 LTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFS 756
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIE----EVVQFLCKR 272
M D + N+ + +A +++ + K+G C + ++ + CK
Sbjct: 757 EMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQG-CRPDQNTYNSIIDWYCKH 815
Query: 273 GKLPEARKLLLFSLKNHHNVD 293
+ EA +KN N+D
Sbjct: 816 NRQDEANSF----VKNLGNID 832
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 116/280 (41%), Gaps = 31/280 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G SPD T+N ++ + G +++ K+ MK+ + + +YS L+ + +
Sbjct: 550 ESGVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIE 609
Query: 64 KAEKLFDELFE----------KEIVLCKFGSQPLAASYKPIFQYLCEHGKT--------- 104
+ + L +E++ K +VL S L + + F+ L E G T
Sbjct: 610 RMKALGEEIYSGSIETHPVLLKTLVLVSSKSDLLMETERAFFE-LKERGITPGLTTLNAM 668
Query: 105 ----------RKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDF 153
KA +L + + G T +Y +++ + R ++ E+L +L++
Sbjct: 669 ISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGM 728
Query: 154 LPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
PD Y+ +I + + + A+ +M S+ +P T+++ +A E+
Sbjct: 729 KPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAID 788
Query: 214 VTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELL 253
V M+ + R + N I+ H +D+A V+ L
Sbjct: 789 VIRYMIKQGCRPDQNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 135/346 (39%), Gaps = 78/346 (22%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNL-DEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G PD T+NTLI + C G+L +E + VF+ +K+ D +Y+ L+
Sbjct: 307 GVVPDLYTYNTLI-TCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALL----------- 354
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
++F K + ++A +VL+ + G + +
Sbjct: 355 ------DVFAKA-------------------------RRPKEALQVLKDMESNGFSPTII 383
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++I H R G E L + M+ + PDV Y L+ GF + K A E ++M
Sbjct: 384 TYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEM 443
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ P T+++++ +G E +V + + +I ++ ++ +FGH
Sbjct: 444 KAAGCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECGCSPDI-VTWNTLLAVFGHNQM 502
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
D ++ V + + + G +PE D N +I
Sbjct: 503 DS---------------EVAGVFKEMKRSGFVPER----------------DTFNTLISA 531
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+A + ++E G+ +L+ N ++ AL ARG E +
Sbjct: 532 YSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAAL-ARGGFWEQS 576
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 143/338 (42%), Gaps = 14/338 (4%)
Query: 24 AGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFG 83
AG + A + + ++N D +Y+ LI +G Y+ A +F+++ + G
Sbjct: 219 AGRVSSAASLLKTLENDGFEIDVYAYTCLITAYASKGRYNDAVSVFNKM-------QRDG 271
Query: 84 SQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG--TQDPLSYMTVIMGHCREGA-YEN 140
P +Y I + G + + MK D +Y T+I CR G+ YE
Sbjct: 272 CTPTLVTYNSILNVYGKMGMSWSRVTAIFDSMKTNGVVPDLYTYNTLITC-CRRGSLYEE 330
Query: 141 GYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILA 200
+ + F+PD Y+ L+D F + +P A++ L+ M + + P T++S+++
Sbjct: 331 VVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLIS 390
Query: 201 RLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCV 260
+ G+ E++R+ V M+++ I+ ++ T + G + AFE+ + + G
Sbjct: 391 AHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKP 450
Query: 261 KI---EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLC 317
I +++ RG E K+ + + DI N ++ E G+
Sbjct: 451 NICTFNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVF 510
Query: 318 YELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
E+ G E N L++A G ++A + K +
Sbjct: 511 KEMKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSM 548
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 154/346 (44%), Gaps = 44/346 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GFSP T+N+LI +H G L+EA ++ M + D +Y+ L+ + G + A
Sbjct: 377 GFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFA 436
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+++DE+ G +P ++ + + G + +V +I + G + D ++
Sbjct: 437 FEVYDEMKAA-------GCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVT 489
Query: 125 YMTV--IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+ T+ + GH + + G + M R F+P+ + ++ LI + + AM +
Sbjct: 490 WNTLLAVFGHNQMDSEVAG--VFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKS 547
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
ML+S P ST++++LA L GF +S ++ M D R N L+ S+ + +G
Sbjct: 548 MLESGVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPN-ELTYSSLLHAYANG- 605
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
K E ++ L ++ + IE L + L+L S K+ DL
Sbjct: 606 --KEIERMKALGEEIYSGSIETHPVLL---------KTLVLVSSKS------DL------ 642
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
L E R +EL E+G+ LT LN +++ + V +A
Sbjct: 643 -LMETERAF------FELKERGITPGLTTLNAMISIYGRKQVVSKA 681
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 138/321 (42%), Gaps = 38/321 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ TFNTLI ++ G+ D+A+ V+++M V+ D ++Y+ ++ L + G ++++
Sbjct: 517 GFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQS 576
Query: 66 EKLFDELFE--------------------KEIVLCK-FGSQPLAASY-------KPIFQY 97
EK+ E+ + KEI K G + + S K +
Sbjct: 577 EKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEIYSGSIETHPVLLKTLVLV 636
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMG-HCREGAYENGYELLIWMLRRDFLPD 156
+ + ER ++ +RG L+ + ++ + R+ E+L +M F P
Sbjct: 637 SSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPS 696
Query: 157 VEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTV 216
+ Y+ L+ + + DK + E L ++LK P ++++++ G E+ R+
Sbjct: 697 LTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFS 756
Query: 217 MMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIE----EVVQFLCKR 272
M D + N+ + +A +++ + K+G C + ++ + CK
Sbjct: 757 EMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQG-CRPDQNTYNSIIDWYCKH 815
Query: 273 GKLPEARKLLLFSLKNHHNVD 293
+ EA +KN N+D
Sbjct: 816 NRQDEANSF----VKNLGNID 832
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 116/280 (41%), Gaps = 31/280 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G SPD T+N ++ + G +++ K+ MK+ + + +YS L+ + +
Sbjct: 550 ESGVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIE 609
Query: 64 KAEKLFDELFE----------KEIVLCKFGSQPLAASYKPIFQYLCEHGKT--------- 104
+ + L +E++ K +VL S L + + F+ L E G T
Sbjct: 610 RMKALGEEIYSGSIETHPVLLKTLVLVSSKSDLLMETERAFFE-LKERGITPGLTTLNAM 668
Query: 105 ----------RKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDF 153
KA +L + + G T +Y +++ + R ++ E+L +L++
Sbjct: 669 ISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGM 728
Query: 154 LPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
PD Y+ +I + + + A+ +M S+ +P T+++ +A E+
Sbjct: 729 KPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAID 788
Query: 214 VTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELL 253
V M+ + R + N I+ H +D+A V+ L
Sbjct: 789 VIRYMIKQGCRPDQNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 135/346 (39%), Gaps = 78/346 (22%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNL-DEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G PD T+NTLI + C G+L +E + VF+ +K+ D +Y+ L+
Sbjct: 307 GVVPDLYTYNTLI-TCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALL----------- 354
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
++F K + ++A +VL+ + G + +
Sbjct: 355 ------DVFAKA-------------------------RRPKEALQVLKDMESNGFSPTII 383
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++I H R G E L + M+ + PDV Y L+ GF + K A E ++M
Sbjct: 384 TYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEM 443
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ P T+++++ +G E +V + + +I ++ ++ +FGH
Sbjct: 444 KAAGCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECGCSPDI-VTWNTLLAVFGHNQM 502
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
D ++ V + + + G +PE D N +I
Sbjct: 503 DS---------------EVAGVFKEMKRSGFVPER----------------DTFNTLISA 531
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+A + ++E G+ +L+ N ++ AL ARG E +
Sbjct: 532 YSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAAL-ARGGFWEQS 576
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 143/350 (40%), Gaps = 52/350 (14%)
Query: 12 CTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
FN L+ + C + N+ +A ++F++MK + DS +YSIL+ + + KA ++F E
Sbjct: 167 AAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDSKTYSILLEGWGKEPNLPKAREVFGE 225
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMG 131
+ G P +Y + LC+ G+ +A V+++ M P S++ ++
Sbjct: 226 MVSA-------GCNPDIVTYGIMVDILCKAGRVDEAVEVVKE-MDDNDCRPTSFIYSVLV 277
Query: 132 HCR--EGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
H E E+ ++ + M + DV +Y+ LI F + +K L++M +
Sbjct: 278 HTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIA 337
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P + T + I++ L+ G DKAF +
Sbjct: 338 PNSRTCNVIMSSLI-----------------------------------SQGETDKAFSV 362
Query: 250 VELLYKKGFCVKIEE----VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
+ K C + +++ C+R ++ A K+ + + + +I GLC
Sbjct: 363 FRRMIK--LCEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLC 420
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
++A L E++EKG+ L L G+ + F+ ++I
Sbjct: 421 AKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRDDVLKFLHEKI 470
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 13/219 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D P + ++ L+H++ +++A+ +F M+ + AD Y+ LI C+
Sbjct: 263 DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLK 322
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
++ E+ G P + + I L G+T KA V R+++K D
Sbjct: 323 NVHRVLKEMESN-------GIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDAD 375
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I C + ++ +M + F+P + + LI+G K + A LE+M
Sbjct: 376 TYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEM 435
Query: 184 LKSSYLPKTSTWHSILARLLEKG------FPHESARVTV 216
++ P T+ + L+++G F HE + V
Sbjct: 436 IEKGIRPSRITFGKLRQLLIKEGRDDVLKFLHEKINMLV 474
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 9/241 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G +PD T+ ++ C AG +DEA++V + M + S YS+L+ G +
Sbjct: 229 AGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTY---GVESR 285
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
E D E E K G Y + C+ K + RVL+++ G
Sbjct: 286 IEDAIDMFMEME----KNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSR 341
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
VIM +G + + + M++ PD + Y LI F ++++ +A++ + M
Sbjct: 342 TCNVIMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYM 400
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
++P T+ ++ L KG ++ + M+++ IR + K +LL G
Sbjct: 401 KSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRD 460
Query: 244 D 244
D
Sbjct: 461 D 461
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 143/350 (40%), Gaps = 52/350 (14%)
Query: 12 CTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
FN L+ + C + N+ +A ++F++MK + DS +YSIL+ + + KA ++F E
Sbjct: 167 AAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDSKTYSILLEGWGKEPNLPKAREVFGE 225
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMG 131
+ G P +Y + LC+ G+ +A V+++ M P S++ ++
Sbjct: 226 MVSA-------GCNPDIVTYGIMVDILCKAGRVDEAVEVVKE-MDDNDCRPTSFIYSVLV 277
Query: 132 HCR--EGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
H E E+ ++ + M + DV +Y+ LI F + +K L++M +
Sbjct: 278 HTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIA 337
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P + T + I++ L+ G DKAF +
Sbjct: 338 PNSRTCNVIMSSLI-----------------------------------SQGETDKAFSV 362
Query: 250 VELLYKKGFCVKIEE----VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
+ K C + +++ C+R ++ A K+ + + + +I GLC
Sbjct: 363 FRRMIK--LCEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLC 420
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
++A L E++EKG+ L L G+ + F+ ++I
Sbjct: 421 AKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRDDVLKFLHEKI 470
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 13/219 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D P + ++ L+H++ +++A+ +F M+ + AD Y+ LI C+
Sbjct: 263 DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLK 322
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
++ E+ G P + + I L G+T KA V R+++K D
Sbjct: 323 NVHRVLKEMESN-------GIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDAD 375
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I C + ++ +M + F+P + + LI+G K + A LE+M
Sbjct: 376 TYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEM 435
Query: 184 LKSSYLPKTSTWHSILARLLEKG------FPHESARVTV 216
++ P T+ + L+++G F HE + V
Sbjct: 436 IEKGIRPSRITFGKLRQLLIKEGRDDVLKFLHEKINMLV 474
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 9/241 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G +PD T+ ++ C AG +DEA++V + M + S YS+L+ G +
Sbjct: 229 AGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTY---GVESR 285
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
E D E E K G Y + C+ K + RVL+++ G
Sbjct: 286 IEDAIDMFMEME----KNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSR 341
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
VIM +G + + + M++ PD + Y LI F ++++ +A++ + M
Sbjct: 342 TCNVIMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYM 400
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
++P T+ ++ L KG ++ + M+++ IR + K +LL G
Sbjct: 401 KSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRD 460
Query: 244 D 244
D
Sbjct: 461 D 461
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 143/350 (40%), Gaps = 52/350 (14%)
Query: 12 CTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
FN L+ + C + N+ +A ++F++MK + DS +YSIL+ + + KA ++F E
Sbjct: 167 AAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDSKTYSILLEGWGKEPNLPKAREVFGE 225
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMG 131
+ G P +Y + LC+ G+ +A V+++ M P S++ ++
Sbjct: 226 MVSA-------GCNPDIVTYGIMVDILCKAGRVDEAVEVVKE-MDDNDCRPTSFIYSVLV 277
Query: 132 HCR--EGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
H E E+ ++ + M + DV +Y+ LI F + +K L++M +
Sbjct: 278 HTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIA 337
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P + T + I++ L+ G DKAF +
Sbjct: 338 PNSRTCNVIMSSLI-----------------------------------SQGETDKAFSV 362
Query: 250 VELLYKKGFCVKIEE----VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
+ K C + +++ C+R ++ A K+ + + + +I GLC
Sbjct: 363 FRRMIK--LCEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLC 420
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
++A L E++EKG+ L L G+ + F+ ++I
Sbjct: 421 AKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRDDVLKFLHEKI 470
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 13/219 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D P + ++ L+H++ +++A+ +F M+ + AD Y+ LI C+
Sbjct: 263 DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLK 322
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
++ E+ G P + + I L G+T KA V R+++K D
Sbjct: 323 NVHRVLKEMESN-------GIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDAD 375
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I C + ++ +M + F+P + + LI+G K + A LE+M
Sbjct: 376 TYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEM 435
Query: 184 LKSSYLPKTSTWHSILARLLEKG------FPHESARVTV 216
++ P T+ + L+++G F HE + V
Sbjct: 436 IEKGIRPSRITFGKLRQLLIKEGRDDVLKFLHEKINMLV 474
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 9/241 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G +PD T+ ++ C AG +DEA++V + M + S YS+L+ G +
Sbjct: 229 AGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTY---GVESR 285
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
E D E E K G Y + C+ K + RVL+++ G
Sbjct: 286 IEDAIDMFMEME----KNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSR 341
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
VIM +G + + + M++ PD + Y LI F ++++ +A++ + M
Sbjct: 342 TCNVIMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYM 400
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
++P T+ ++ L KG ++ + M+++ IR + K +LL G
Sbjct: 401 KSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRD 460
Query: 244 D 244
D
Sbjct: 461 D 461
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 143/350 (40%), Gaps = 52/350 (14%)
Query: 12 CTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
FN L+ + C + N+ +A ++F++MK + DS +YSIL+ + + KA ++F E
Sbjct: 167 AAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDSKTYSILLEGWGKEPNLPKAREVFGE 225
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMG 131
+ G P +Y + LC+ G+ +A V+++ M P S++ ++
Sbjct: 226 MVSA-------GCNPDIVTYGIMVDILCKAGRVDEAVEVVKE-MDDNDCRPTSFIYSVLV 277
Query: 132 HCR--EGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
H E E+ ++ + M + DV +Y+ LI F + +K L++M +
Sbjct: 278 HTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIA 337
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P + T + I++ L+ G DKAF +
Sbjct: 338 PNSRTCNVIMSSLI-----------------------------------SQGETDKAFSV 362
Query: 250 VELLYKKGFCVKIEE----VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLC 305
+ K C + +++ C+R ++ A K+ + + + +I GLC
Sbjct: 363 FRRMIK--LCEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLC 420
Query: 306 EINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
++A L E++EKG+ L L G+ + F+ ++I
Sbjct: 421 AKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRDDVLKFLHEKI 470
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 13/219 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D P + ++ L+H++ +++A+ +F M+ + AD Y+ LI C+
Sbjct: 263 DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLK 322
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
++ E+ G P + + I L G+T KA V R+++K D
Sbjct: 323 NVHRVLKEMESN-------GIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDAD 375
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y +I C + ++ +M + F+P + + LI+G K + A LE+M
Sbjct: 376 TYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEM 435
Query: 184 LKSSYLPKTSTWHSILARLLEKG------FPHESARVTV 216
++ P T+ + L+++G F HE + V
Sbjct: 436 IEKGIRPSRITFGKLRQLLIKEGRDDVLKFLHEKINMLV 474
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 9/241 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G +PD T+ ++ C AG +DEA++V + M + S YS+L+ G +
Sbjct: 229 AGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTY---GVESR 285
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
E D E E K G Y + C+ K + RVL+++ G
Sbjct: 286 IEDAIDMFMEME----KNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSR 341
Query: 125 YMTVIMGH-CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
VIM +G + + + M++ PD + Y LI F ++++ +A++ + M
Sbjct: 342 TCNVIMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYM 400
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
++P T+ ++ L KG ++ + M+++ IR + K +LL G
Sbjct: 401 KSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRD 460
Query: 244 D 244
D
Sbjct: 461 D 461
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G SP+ T+ TL+ + S G+ ++A + F +KN + D +Y L++ C+ G
Sbjct: 647 AGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQS 706
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A + E+ K+I F Y + G +A +++Q+ K G Q D
Sbjct: 707 ALAVTKEMSSKKIPRNTF-------VYNILIDGWARRGDVWEAADLMQQMRKEGVQPDIH 759
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y + I C+ G +N +++ M R P+++ Y LI G+ + P A++ E +
Sbjct: 760 TYTSFINACCKAGDMQNATQVIKEMEARGIKPNLKTYTTLIHGWARAAFPEKALKCFEDL 819
Query: 184 LKSSYLPKTSTWHSILARLLEKG 206
+ P + +H ++ LL +
Sbjct: 820 KVAGLKPDRAVYHCLMTSLLSRA 842
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 146/356 (41%), Gaps = 50/356 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GFSP ++ LI+ + G + +AL++ MK + + +YS+L + D+ A
Sbjct: 473 GFSPSIVSYGCLINLYTKIGKVSKALEISRVMKTVGIKHNMKTYSMLFNGFVKLKDWANA 532
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLS 124
+F+++ K G +P Y I + C G +A +++Q+ + R +
Sbjct: 533 FSVFEDI-------TKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHRATTRT 585
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ +I G R G E+ M R +P V Y+ LI G ++K + A++ L++M
Sbjct: 586 FLPIIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILDEMN 645
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ +++ +G+ G +
Sbjct: 646 LAGVSPNEHTYTTLM-----QGYA------------------------------SLGDTE 670
Query: 245 KAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLL--LFSLKNHHNVDIDLCNA 299
KAF+ +L G + + E +++ CK G++ A + + S K N + N
Sbjct: 671 KAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTFV--YNI 728
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRI 355
+I G V EA L ++ ++G+ ++ + A G ++ A + K +
Sbjct: 729 LIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINACCKAGDMQNATQVIKEM 784
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 150/348 (43%), Gaps = 13/348 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P + +++LIH++ +++EAL MK+ + +YSI++ + G+ D A
Sbjct: 333 GIEPSSHVYSSLIHAYAVGRDMEEALNCVRKMKDEGIEMSIVTYSIIVGGFAKLGNADAA 392
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS- 124
+ F E E L A Y I C+ K +AE ++R++ ++G P+
Sbjct: 393 DNWFKEAKESLPSLN-------AVIYGSIIYAHCQACKMGRAEALVREMEEQGIDAPIDI 445
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G+ G E + + F P + Y CLI+ + + K A+E + +++
Sbjct: 446 YHTMMDGYTMIGNEEKCLIVFERLKECGFSPSIVSYGCLINLYTKIGKVSKALE-ISRVM 504
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN-IRQNINLSTKSIELLFGHGHR 243
K+ + +S+L K +A + ++ ++ ++ L ++ G G+
Sbjct: 505 KTVGIKHNMKTYSMLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNIVKAFCGMGNM 564
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLL-LFSLKNHHNV--DIDLCNAV 300
D+A IV+ + ++ + + + E R+ L +F + NA+
Sbjct: 565 DRAICIVKQMQRERHRATTRTFLPIIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNAL 624
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
ILGL E ++ +A + E+ G+ L+ + G E+A
Sbjct: 625 ILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKA 672
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 13/238 (5%)
Query: 11 TCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFD 70
T TF +IH AG AL++F+ M+ +Y+ LI L ++ +KA ++ D
Sbjct: 583 TRTFLPIIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILD 642
Query: 71 ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVI 129
E+ G P +Y + Q G T KA + + G + D +Y ++
Sbjct: 643 EM-------NLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALL 695
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
C+ G ++ + M + + +Y+ LIDG+ ++ A + +++M K
Sbjct: 696 KACCKSGRMQSALAVTKEMSSKKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQ 755
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T+ S + + G + +V M R I+ N+ T I HG AF
Sbjct: 756 PDIHTYTSFINACCKAGDMQNATQVIKEMEARGIKPNLKTYTTLI-----HGWARAAF 808
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T+N LI +++AL++ + M V+ + +Y+ L++ GD +KA
Sbjct: 613 GCIPTVHTYNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKA 672
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLS 124
+ F +L G + +Y+ + + C+ G+ + A V +++ K+ ++
Sbjct: 673 FQYF-------TILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTFV 725
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G R G +L+ M + PD+ Y I+ + A + +++M
Sbjct: 726 YNILIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINACCKAGDMQNATQVIKEME 785
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHES 211
P T+ +++ FP ++
Sbjct: 786 ARGIKPNLKTYTTLIHGWARAAFPEKA 812
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMK-NFQVTADSASYSILIRNLCQRGD 61
G+ G TF LIH +D+AL++F+ M+ T D + Y +LI LC+ D
Sbjct: 246 GECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKD 305
Query: 62 YDKAEKLFDELFEKEI-----VLCKFGS-----------------------QPLAASYKP 93
D+A LF E+ E + +L K S Q L Y
Sbjct: 306 TDRAISLFSEMKEFGVRPDIGILTKLISCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNA 365
Query: 94 IFQYLCEHGKTRKAERVLRQIM--KRGTQDPLSYMTVIMGHCREGAYEN--GYELLI-WM 148
+ G +A R++R ++ K T + M V + + N + ++I
Sbjct: 366 LLTCYVNDGLMDEAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSFSIVIDGF 425
Query: 149 LRRDFL----------------PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
L+ D L P + IY+ LID + ++ + E L +M + P
Sbjct: 426 LKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTH 485
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVEL 252
T++SI L ++ + + M I +T ++ L HG +A E ++
Sbjct: 486 FTYNSIYGCLCKRKDVSAACVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDN 545
Query: 253 LYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINR 309
+ ++GF V + L ++ A K+ + H D+ N +I GLC++NR
Sbjct: 546 MTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNR 605
Query: 310 VLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
EA L +ELV++GL + N + G V++A R+ E+ SV++Y+
Sbjct: 606 FTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTK-EDKVPSVVTYT 664
Query: 370 S------KKSRPNKA 378
+ K+ RP+ A
Sbjct: 665 TLVDGFCKEERPDDA 679
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 28/281 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD +++ I + +D A+K+F+++ + D +++LIR LC+ + +A
Sbjct: 550 GFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEA 609
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA-ERVLRQIMKRGTQDPLS 124
E LF EL ++ G P +Y C++G KA + R + ++
Sbjct: 610 EDLFHELVKR-------GLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVT 662
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G C+E ++ L M + P+ + LI G + +P A+ L +M
Sbjct: 663 YTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCKCCRPTEALCYLREMQ 722
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P + + ++L+ L D N+ + + ++L F D
Sbjct: 723 QKEMKPDSFIYVALLSAYLS---------------DLNLTSAFEIFREMVDLGFFPKPLD 767
Query: 245 KAF-EIVELLYKKGFCV--KIEEVVQFLCKRGKLPEARKLL 282
K + +V+ + K FC + +Q L + GKLP +LL
Sbjct: 768 KNYPTVVDAILK--FCKDDRTSSGIQVLIEEGKLPMHCELL 806
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF+P+ TFN LI+ HC G + +A + E + ++ D ++S +I LC+ ++A
Sbjct: 5 GFTPNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEA 64
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ F+E+ E +G P A Y + + LC G+T ++ ++LR++ + G + D S
Sbjct: 65 FECFNEMVE-------WGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYS 117
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I CR E +L M + F PD Y I + + +E +KM
Sbjct: 118 YNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGR----LEEAKKMF 173
Query: 185 KS 186
S
Sbjct: 174 YS 175
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 117 RG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLL 175
RG T + +++ +I GHC++GA E L +L PD+ + C+IDG + +
Sbjct: 4 RGFTPNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKRTEE 63
Query: 176 AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
A E +M++ P ++ ++ L G S ++ M + I +I I+
Sbjct: 64 AFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQ 123
Query: 236 LLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV 292
+ +KA ++ + + K GF + L + G+L EA+K+ N +
Sbjct: 124 IFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSIEANGCSP 183
Query: 293 DIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELT 330
D +CN VI L +RV EA + +KG+ T
Sbjct: 184 DSYVCNLVIKALVRHDRVEEAQKIVERCRQKGIALNCT 221
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G +P+ +N LI S CS G ++K+ M+ ++ D SY+ LI+ C+ +
Sbjct: 73 EWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNKVE 132
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
KA+KLFD + K G P +Y L E G+ +A+++ I G P
Sbjct: 133 KAKKLFDS-------MSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSIEANGCS-PD 184
Query: 124 SYM 126
SY+
Sbjct: 185 SYV 187
>Medtr7g099380.1 | PPR containing plant-like protein | HC |
chr7:39851414-39850788 | 20130731
Length = 208
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P+ T+N L+H +C L EA++V E M + D +Y+ ++R LC G D
Sbjct: 3 NNGLVPNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKID 62
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDP 122
+A +L DE+ +V P +Y + EH + A +++ ++ RG ++
Sbjct: 63 EAVRLRDEMESLRLV-------PDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENA 115
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEI--YDCLIDGFLQKDKPLLAMETL 180
+++ ++ C+EG + + M FL V + Y+ +I+G+ + K A + +
Sbjct: 116 VTHNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKMAKAFKMM 175
Query: 181 EKMLKSSYLPKTSTWHSILARL-LEK 205
++M + T T ++IL L LEK
Sbjct: 176 DEMGRKGLKTDTFTLNTILYTLCLEK 201
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 7/207 (3%)
Query: 148 MLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGF 207
M +P+ Y+ L+ G+ + A+E E M + LP T+++++ L ++G
Sbjct: 1 MKNNGLVPNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGK 60
Query: 208 PHESARVTVMMLD-RNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIE 263
E+ R+ M R + + +T I+ F H AF++VE + +G V
Sbjct: 61 IDEAVRLRDEMESLRLVPDGVTYNT-LIDGCFEHQGSAAAFKLVEEMKSRGVKENAVTHN 119
Query: 264 EVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLC--NAVILGLCEINRVLEAFGLCYELV 321
+V++ CK G + EA + ++ + + L N +I G C+ ++ +AF + E+
Sbjct: 120 IMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKMAKAFKMMDEMG 179
Query: 322 EKGLHQELTCLNDLVTALEARGKVEEA 348
KGL + LN ++ L K+++A
Sbjct: 180 RKGLKTDTFTLNTILYTLCLEKKLDDA 206
>Medtr5g088510.1 | PPR containing plant-like protein | LC |
chr5:38416793-38420408 | 20130731
Length = 978
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 151/346 (43%), Gaps = 27/346 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ PD T N ++ C G ++ AL+++E+ F + ++ +Y LI NLC G
Sbjct: 384 ESSIPPDQITMNVVLCFFCKIGMVNVALQLYESRSQFGLNPNTIAYKYLILNLCWDGSVK 443
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
+A +F + + P ++ + LC K + + ++ +R T P
Sbjct: 444 EAYSVFKRFIGNDKLF------PDRETFTTLANALCRECKVDEMKELMDLAKEREFTLSP 497
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVE---IYDCLIDGFLQKDKPLLAMET 179
++ I C+ G E+GY+ L + YD +I+GF++ +K +A
Sbjct: 498 VTNAKFISALCQAGRLEDGYD------EHGKLENATAKLYYDKMIEGFIKSNKGEIAARL 551
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
L +M + + + +++ RLL+ P RVT +LD + + + + G
Sbjct: 552 LVEMKEKNLRLTRFSCRAVICRLLDMDNP--ITRVT-KLLDSLTQGKPDTKIFNF-FIVG 607
Query: 240 HGH---RDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVD 293
GH D A E+ EL+ + + V+ + GK+ +A SL+ V
Sbjct: 608 AGHANNTDLAREVYELMPRNNIVPTLLSQRLVLNSYLRNGKIIDALN-FFNSLRRLGVVS 666
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
L ++++GLC+ N+V A +E++ G++ ++ C LV L
Sbjct: 667 KKLYCSMVIGLCKSNKVDIAHDFLFEMLNAGVNPDIECFESLVWKL 712
>Medtr1g112240.1 | PPR containing plant-like protein | HC |
chr1:50767348-50763755 | 20130731
Length = 559
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 147/341 (43%), Gaps = 25/341 (7%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+ LI ++C +G L A VF M+N+ + + + Y+ I L + G++DKAE++
Sbjct: 170 PNEDTYALLIKAYCMSGKLQSAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNFDKAEEI 229
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
F + CK + SY + + GK+ A +V +++ + + + +Y
Sbjct: 230 FKRMKRDG---CKLSLE----SYTMLINLYGKAGKSYMALKVFDEMLSQKCKPNICTYTA 282
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ REG E E+ M PDV Y+ L++ + + P A E M
Sbjct: 283 LVNAFAREGLCEKAEEIFEQMQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMG 342
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH----GHR 243
P ++++ ++ + GF ++ V + R I + KS +L G+
Sbjct: 343 CEPDRASYNILVDAYGKAGFQDDAEAV----FENMKRVGITPTMKSHMVLLSAYSKMGNV 398
Query: 244 DKAFEIVELLYKKGFCVK---IEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
K +I+ + K G + + ++ + G+ + ++L K + VDI N +
Sbjct: 399 TKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEKGSYVVDISTFNIL 458
Query: 301 ILGLCE---INRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
I + I ++ E F L L+ KGL ++ + A
Sbjct: 459 IHRYGQAGFIEKMEEQFQL---LLTKGLKPDVVTWTSRIGA 496
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD +N L+ ++ AG A ++F M++ D ASY+IL+ + G D
Sbjct: 305 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQD 364
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
AE +F+ + + G P S+ + + G K E +L Q+ K G + D
Sbjct: 365 DAEAVFEN-------MKRVGITPTMKSHMVLLSAYSKMGNVTKCEDILNQMCKSGLKLDT 417
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLID-----GFLQKDKPLLAM 177
+++ + R G + E+L M + ++ D+ ++ LI GF++K +
Sbjct: 418 FVLNSMLNLYGRLGQFGKMEEVLTVMEKGSYVVDISTFNILIHRYGQAGFIEKME----- 472
Query: 178 ETLEKMLKSSYLPKTSTWHS 197
E + +L P TW S
Sbjct: 473 EQFQLLLTKGLKPDVVTWTS 492
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD ++N L+ ++ AG D+A VFENMK +T S+ +L+ + G+ K
Sbjct: 342 GCEPDRASYNILVDAYGKAGFQDDAEAVFENMKRVGITPTMKSHMVLLSAYSKMGNVTKC 401
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ--DPL 123
E + ++ +CK G + + G+ K E VL +M++G+ D
Sbjct: 402 EDILNQ-------MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL-TVMEKGSYVVDIS 453
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ +I + + G E E +L + PDV + I + +K L +E E+M
Sbjct: 454 TFNILIHRYGQAGFIEKMEEQFQLLLTKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEM 513
Query: 184 LKSSYLPKTSTWHSILA 200
+ + P T +LA
Sbjct: 514 IDAGCYPDGGTAKVLLA 530
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 109/292 (37%), Gaps = 27/292 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +N I+ GN D+A ++F+ MK SY++LI + G A
Sbjct: 202 GLPSSAVVYNAYINGLMKGGNFDKAEEIFKRMKRDGCKLSLESYTMLINLYGKAGKSYMA 261
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
K+FDE+ ++ CK P +Y + G KAE + Q+ + G + D +
Sbjct: 262 LKVFDEMLSQK---CK----PNICTYTALVNAFAREGLCEKAEEIFEQMQEAGLEPDVYA 314
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ + R G E+ M PD Y+ L+D + + A E M
Sbjct: 315 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFENMK 374
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P + +L+ + G + + M ++ + + + L G
Sbjct: 375 RVGITPTMKSHMVLLSAYSKMGNVTKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFG 434
Query: 245 KAFEIVELLYK-------------------KGFCVKIEEVVQFLCKRGKLPE 277
K E++ ++ K GF K+EE Q L +G P+
Sbjct: 435 KMEEVLTVMEKGSYVVDISTFNILIHRYGQAGFIEKMEEQFQLLLTKGLKPD 486
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SP+ T+ LI C G L+EAL +F+ M + + + +++ L+ C+ G ++A
Sbjct: 26 GISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEA 85
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ + + + EK++ + +Y + C + KA+ + + + +R + D S
Sbjct: 86 KNVLNTMMEKDL-------KSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRS 138
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I C+ + +L M + PDV Y LIDG + + AME +++M
Sbjct: 139 YNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMD 198
Query: 185 KSSYLPKTSTWHSILARL 202
P T+ I+ L
Sbjct: 199 DRGEPPNIITYCPIVDVL 216
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 42 VTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEH 101
++ + +Y+ LI C G ++A LF ++ + I P ++ + C+
Sbjct: 27 ISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENI-------NPNVYTFNGLVDAFCKE 79
Query: 102 GKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIY 160
GK +A+ VL +M++ + D ++Y +++ G+C + M R+ DV Y
Sbjct: 80 GKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSY 139
Query: 161 DCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLD 220
+ +I+ F + A++ E+M P T+H+++ L + G + + M D
Sbjct: 140 NIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDD 199
Query: 221 RNIRQNI 227
R NI
Sbjct: 200 RGEPPNI 206
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 161/397 (40%), Gaps = 44/397 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRN-------- 55
+ G PD+ FN +I++ +G + EA+K+F MK +++++ LI+
Sbjct: 106 ENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPH 165
Query: 56 --------LCQRGDYDKAEKLF----------DELFEKEIVLCKF---GSQPLAASYKPI 94
+ Q G+ E+ + +EL E V+ K G QP +Y +
Sbjct: 166 EAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTL 225
Query: 95 FQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMT---VIMGHCREGAYENGYELLIWMLRR 151
+ ++G+T AER++ ++ + + + T +I G+C+EG L M
Sbjct: 226 ARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKEL 285
Query: 152 DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHES 211
P+ +++ LI G+L E L M + P T+ +I+ G
Sbjct: 286 GVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNC 345
Query: 212 ARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQF 268
+ M+ I +I + + G DKA ++ + K G V ++
Sbjct: 346 EEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISG 405
Query: 269 LCKRGKLPEARKLLLFSLKNHHNVDIDL--CNAVILGLCEINRVLEAFGLCYELVEKGLH 326
C GK+ A L L+ N ++L +I G E + +A L + E G+
Sbjct: 406 WCAAGKMDCA--LRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVA 463
Query: 327 QELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDR 363
E++ + +LV LE E +IPG ++LDR
Sbjct: 464 PEMSTI-ELVQMLEEE---SEFDESFDKIPG-QSLDR 495
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 10/291 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M DG P+ T+N LI + C+ L+EA V M N + D +Y+ L R Q G
Sbjct: 174 MIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNG 233
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+ D AE+L ++ + + +P + I + C+ G +A R L ++ + G
Sbjct: 234 ETDNAERLILKMQQYNNKV-----KPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVH 288
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+P+ + ++I G+ + E L M PDV Y +++ + E
Sbjct: 289 PNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEI 348
Query: 180 LEKMLKSSYLPKTSTWHSILAR-LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
+ M+K+ P +SILA+ + G P ++ + M ++ N+ + T I
Sbjct: 349 FDDMVKAEIEPDIQA-YSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWC 407
Query: 239 GHGHRDKAFEIVELLYKKG--FCVKIEEVVQFLCKRGKLPEARKLLLFSLK 287
G D A + E + + G +K E + + K P + LL +++
Sbjct: 408 AAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTME 458
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRD 152
+ L GK +A + + + G + + +Y T++ R + + LL +
Sbjct: 49 LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
PD +++ +I+ F K AM+ KM + P TST+++++ G PHE+
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAM 168
Query: 213 RVTVMML-DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQF 268
++ MM+ D N++ N I+ ++A+ ++ + G V + +
Sbjct: 169 KLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 228
Query: 269 LCKRGKLPEARKLLLFSLKNHHNVDID--LCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
+ G+ A +L+L + ++ V + C +I G C+ + EA Y++ E G+H
Sbjct: 229 FAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVH 288
Query: 327 QELTCLNDLV 336
N L+
Sbjct: 289 PNPVVFNSLI 298
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 161/397 (40%), Gaps = 44/397 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRN-------- 55
+ G PD+ FN +I++ +G + EA+K+F MK +++++ LI+
Sbjct: 106 ENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPH 165
Query: 56 --------LCQRGDYDKAEKLF----------DELFEKEIVLCKF---GSQPLAASYKPI 94
+ Q G+ E+ + +EL E V+ K G QP +Y +
Sbjct: 166 EAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTL 225
Query: 95 FQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMT---VIMGHCREGAYENGYELLIWMLRR 151
+ ++G+T AER++ ++ + + + T +I G+C+EG L M
Sbjct: 226 ARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKEL 285
Query: 152 DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHES 211
P+ +++ LI G+L E L M + P T+ +I+ G
Sbjct: 286 GVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNC 345
Query: 212 ARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQF 268
+ M+ I +I + + G DKA ++ + K G V ++
Sbjct: 346 EEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISG 405
Query: 269 LCKRGKLPEARKLLLFSLKNHHNVDIDL--CNAVILGLCEINRVLEAFGLCYELVEKGLH 326
C GK+ A L L+ N ++L +I G E + +A L + E G+
Sbjct: 406 WCAAGKMDCA--LRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVA 463
Query: 327 QELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDR 363
E++ + +LV LE E +IPG ++LDR
Sbjct: 464 PEMSTI-ELVQMLEEE---SEFDESFDKIPG-QSLDR 495
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 10/291 (3%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M DG P+ T+N LI + C+ L+EA V M N + D +Y+ L R Q G
Sbjct: 174 MIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNG 233
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
+ D AE+L ++ + + +P + I + C+ G +A R L ++ + G
Sbjct: 234 ETDNAERLILKMQQYNNKV-----KPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVH 288
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
+P+ + ++I G+ + E L M PDV Y +++ + E
Sbjct: 289 PNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEI 348
Query: 180 LEKMLKSSYLPKTSTWHSILAR-LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
+ M+K+ P +SILA+ + G P ++ + M ++ N+ + T I
Sbjct: 349 FDDMVKAEIEPDIQA-YSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWC 407
Query: 239 GHGHRDKAFEIVELLYKKG--FCVKIEEVVQFLCKRGKLPEARKLLLFSLK 287
G D A + E + + G +K E + + K P + LL +++
Sbjct: 408 AAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTME 458
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRD 152
+ L GK +A + + + G + + +Y T++ R + + LL +
Sbjct: 49 LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
PD +++ +I+ F K AM+ KM + P TST+++++ G PHE+
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAM 168
Query: 213 RVTVMML-DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQF 268
++ MM+ D N++ N I+ ++A+ ++ + G V + +
Sbjct: 169 KLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 228
Query: 269 LCKRGKLPEARKLLLFSLKNHHNVDID--LCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
+ G+ A +L+L + ++ V + C +I G C+ + EA Y++ E G+H
Sbjct: 229 FAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVH 288
Query: 327 QELTCLNDLV 336
N L+
Sbjct: 289 PNPVVFNSLI 298
>Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:51916-50064 | 20130731
Length = 381
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 8/227 (3%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G PD T + LI+ +C G ++ A +F N+ ++ + + L++ +C G +
Sbjct: 161 NGIIPDIVTLSILINCYCHLGQMNFAFSIFGNILKMGFQPNTVTLNTLVKGMCLNGKVKE 220
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPL 123
A D + L + +Y + LC+ GKT +A +VLR+I K D +
Sbjct: 221 ALHFHDHVIALGFPLNQ-------VTYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVV 273
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y T+I C+E YEL M+ + F P V LI GF + A +M
Sbjct: 274 MYSTIIDSLCKEIFVTEAYELYSQMIVKKFSPYVVTLSSLIYGFCIVGQLKKAFCLFHEM 333
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLS 230
L ++ P T++ ++ L ++G + + +M+ R ++ S
Sbjct: 334 LLTNIHPNVYTFNILVDALCKEGNVKGAMNLLAVMMKEAFRLHVEYS 380
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + T+ TLI+ C G EAL+V + V D YS +I +LC+ +A
Sbjct: 232 GFPLNQVTYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKEIFVTEA 291
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+L+ ++ K+ P + + C G+ +KA + +++ + +
Sbjct: 292 YELYSQMIVKKF-------SPYVVTLSSLIYGFCIVGQLKKAFCLFHEMLLTNIHPNVYT 344
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYD 161
+ ++ C+EG + LL M++ F VE D
Sbjct: 345 FNILVDALCKEGNVKGAMNLLAVMMKEAFRLHVEYSD 381
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 8/199 (4%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G SP+ T+ LI C G L+EAL +F+ M + + + +++ L+ C+ G ++
Sbjct: 20 SGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEE 79
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPL 123
A+ + + + EK++ + +Y + C + KA+ + + + +R + D
Sbjct: 80 AKNVLNTMMEKDL-------KSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVR 132
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
SY +I C+ + +L M + PDV Y LIDG + + AME +++M
Sbjct: 133 SYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEM 192
Query: 184 LKSSYLPKTSTWHSILARL 202
P T+ I+ L
Sbjct: 193 DDRGEPPNIITYCPIVDVL 211
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 91/207 (43%), Gaps = 8/207 (3%)
Query: 22 CSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCK 81
C +++A ++ M ++ + +Y+ LI C G ++A LF ++ + I
Sbjct: 2 CKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENI---- 57
Query: 82 FGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYEN 140
P ++ + C+ GK +A+ VL +M++ + D ++Y +++ G+C
Sbjct: 58 ---NPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFK 114
Query: 141 GYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILA 200
+ M R+ DV Y+ +I+ F + A++ E+M P T+H+++
Sbjct: 115 AQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLID 174
Query: 201 RLLEKGFPHESARVTVMMLDRNIRQNI 227
L + G + + M DR NI
Sbjct: 175 GLCKSGRLSYAMELVDEMDDRGEPPNI 201
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 156/352 (44%), Gaps = 27/352 (7%)
Query: 9 PDTCTFNTLIHSHCSAGN--LDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
P FN ++ S + N A+ +F ++ +VT D +++I+I C G+ + A
Sbjct: 65 PPIIEFNKILGSLVKSKNNHYPTAISLFNQLELNRVTPDIVTFNIVINCYCHLGEINFAF 124
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYM 126
L ++ KFG QP + + + G+TR A ++LR+I + +
Sbjct: 125 SLLGKIL-------KFGFQPNIVTLTTLIK-----GETRAALQMLRKIEGKLVNTDVVMY 172
Query: 127 TVIMGHCREGAY------ENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
T I+ A+ + + L M+ + LP+V + L+D ++ A +
Sbjct: 173 TAIIDMLSFMAFAWLVNSKQAFGLFHEMVLTNILPNVYTSNILVDALCKEGNVKQAKNMI 232
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
M+K +P T+ S++ +++ V ++ R I+ +++ T I L
Sbjct: 233 AMMMKQGVVPDVVTYTSLMDGYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKI 292
Query: 241 GHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHN----VDIDL 296
D+A + + ++ + V ++ LCK G++ A +LL K H + V+I
Sbjct: 293 KMVDEALNLFKEMHCEPNMVTYSSLIDGLCKSGRVSHAWELL---DKMHDDRGQPVNIIT 349
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N+++ LC+ + V +A L ++ ++G+ +T N L+ L G++ A
Sbjct: 350 YNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLCKEGRLRNA 401
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 67/118 (56%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M D G + T+N+L+H+ C ++D+A+ + + +K+ + + +Y+ILI LC+ G
Sbjct: 337 MHDDRGQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLCKEG 396
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
A+ LFDE + G P A +Y+ I + L ++ + KAE++LR+++ RG
Sbjct: 397 RLRNAQGLFDEAVTLLSKMEDNGCIPDAVTYETIIRALFKNDENDKAEKLLREMIARG 454
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ +L+ +C +++A VF + ++ D SY+I+I LC+ D+A
Sbjct: 239 GVVPDVVTYTSLMDGYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEA 298
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ--DPL 123
LF E+ +P +Y + LC+ G+ A +L ++ Q + +
Sbjct: 299 LNLFKEMH----------CEPNMVTYSSLIDGLCKSGRVSHAWELLDKMHDDRGQPVNII 348
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF-----LQKDKPLL--A 176
+Y +++ C+ + L+ + + P++ Y+ LIDG L+ + L A
Sbjct: 349 TYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLCKEGRLRNAQGLFDEA 408
Query: 177 METLEKMLKSSYLPKTSTWHSILARLLE 204
+ L KM + +P T+ +I+ L +
Sbjct: 409 VTLLSKMEDNGCIPDAVTYETIIRALFK 436
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKN-FQVTADSASYSILIRNLCQRGDYDKAE 66
SPD ++N L+ + C + L + M+ F V + +Y+ILI N+C + +A
Sbjct: 195 SPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREAT 254
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+L D L E+ G +P Y I + C + +A V ++ ++G + D ++Y
Sbjct: 255 RLVDILEEE-------GFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITY 307
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G + G +LL M + PD Y L++G +K + L A+ LE+M
Sbjct: 308 NTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEM 367
Query: 186 SSYLPKTSTWHSIL-----ARLLEKG 206
P T T++++L +R+ +K
Sbjct: 368 KGCSPNTCTYNTLLHGLCKSRMFDKA 393
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 125/293 (42%), Gaps = 10/293 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G SPD T + + S C+A +D+A+++ + + + + D SY+ L++NLC+
Sbjct: 158 GISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLV 217
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
DE+ KF +P +Y + +C R+A R++ + + G + D
Sbjct: 218 YAFIDEM------RTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFL 271
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G+C E+ M + PD+ Y+ LI G + + A + L M
Sbjct: 272 YNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMA 331
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ + P T+ S++ + KG + + M + N + L D
Sbjct: 332 EKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFD 391
Query: 245 KAFEIVELLYKKGFCVKIEEVVQF---LCKRGKLPEARKLLLFSLKNHHNVDI 294
KA E+ + G + + F LC G++ +A ++ +++++ D+
Sbjct: 392 KAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDV 444
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD +NT++ +C EA++V+ MK V D +Y+ LI L + G +A
Sbjct: 264 GFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEA 323
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLS 124
+KL + EK G P +Y + +C G+T A +L ++ MK + + +
Sbjct: 324 KKLLRVMAEK-------GHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCT 376
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ G C+ ++ EL M D+ Y + + A E + +
Sbjct: 377 YNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAV 436
Query: 185 KSSYLPKTSTWHSILARL 202
+S L + + ++ + L
Sbjct: 437 ESKSLSDVAAYSTLESTL 454
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 158/345 (45%), Gaps = 21/345 (6%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
+ CT LI C G + EA ++F M+ +++ LI LC+ + +KA+ LF
Sbjct: 359 NVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLF 418
Query: 70 DEL-----FEKEIVLCKFGSQPLAASYKPI--FQYLCEHGKTRKAERVLRQIMKRGTQDP 122
+L + L + GS ++ S + + + +CE G+ +A +++ + D
Sbjct: 419 CKLEVGRRHSLHLSLSQ-GSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDI 477
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDF-LPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y ++ C + Y ++ ++ + PD Y +I G D+ A + +
Sbjct: 478 ITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQ 537
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLD--RNIRQNINLSTKSIE-LLF 238
+M K+ P S + +++ L K + +R + L+ +++ N S ++E LF
Sbjct: 538 RMQKTGSEPTLSVYRTLMTCLCRKS---KVSRAFTLYLEHLKSLPSRDNDSISTLEKYLF 594
Query: 239 GHGHRDKAFEIVELLYK-KGFCVKIEEVVQF-LCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G ++EL +K + F + ++ C+ GK+ EA L++ S+ + N+ I+
Sbjct: 595 GEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEA--LIILSVLDEFNIKINA 652
Query: 297 --CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
C +I GLC+ R+ +A + +EKG + N L+T L
Sbjct: 653 TSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFMLKPMICNHLLTCL 697
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 13/314 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +NT++ + L+ AL ++ M V + +Y++LI C+RG+ A
Sbjct: 114 GIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGA 173
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
+++ DE+ IV P S I C+ +A ++ MK + P +
Sbjct: 174 QEMLDEMKRVGIV-------PCVLSTTSILYGCCQANNVDEAHKLFND-MKETSYPPDMI 225
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRD-FLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
S V+ G C+ G E +WM++ D F + Y LI+ F + + A K
Sbjct: 226 SCNVVLNGFCKMGRLEEALS-FVWMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTK 284
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M K +P + ++ L ++G E+A++ M + + I+ L
Sbjct: 285 MFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDL 344
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
++A + + + C + + +CKRG + EA++L K + N +I
Sbjct: 345 LNRAQSLSLEISEHNVCTHTILICE-MCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLIN 403
Query: 303 GLCEINRVLEAFGL 316
GLC+ + +A L
Sbjct: 404 GLCKAKNLEKAKNL 417
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 158/345 (45%), Gaps = 21/345 (6%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
+ CT LI C G + EA ++F M+ +++ LI LC+ + +KA+ LF
Sbjct: 359 NVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLF 418
Query: 70 DEL-----FEKEIVLCKFGSQPLAASYKPI--FQYLCEHGKTRKAERVLRQIMKRGTQDP 122
+L + L + GS ++ S + + + +CE G+ +A +++ + D
Sbjct: 419 CKLEVGRRHSLHLSLSQ-GSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDI 477
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDF-LPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y ++ C + Y ++ ++ + PD Y +I G D+ A + +
Sbjct: 478 ITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQ 537
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLD--RNIRQNINLSTKSIE-LLF 238
+M K+ P S + +++ L K + +R + L+ +++ N S ++E LF
Sbjct: 538 RMQKTGSEPTLSVYRTLMTCLCRKS---KVSRAFTLYLEHLKSLPSRDNDSISTLEKYLF 594
Query: 239 GHGHRDKAFEIVELLYK-KGFCVKIEEVVQF-LCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G ++EL +K + F + ++ C+ GK+ EA L++ S+ + N+ I+
Sbjct: 595 GEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEA--LIILSVLDEFNIKINA 652
Query: 297 --CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
C +I GLC+ R+ +A + +EKG + N L+T L
Sbjct: 653 TSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFMLKPMICNHLLTCL 697
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 13/314 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +NT++ + L+ AL ++ M V + +Y++LI C+RG+ A
Sbjct: 114 GIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGA 173
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
+++ DE+ IV P S I C+ +A ++ MK + P +
Sbjct: 174 QEMLDEMKRVGIV-------PCVLSTTSILYGCCQANNVDEAHKLFND-MKETSYPPDMI 225
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRD-FLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
S V+ G C+ G E +WM++ D F + Y LI+ F + + A K
Sbjct: 226 SCNVVLNGFCKMGRLEEALS-FVWMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTK 284
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M K +P + ++ L ++G E+A++ M + + I+ L
Sbjct: 285 MFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDL 344
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
++A + + + C + + +CKRG + EA++L K + N +I
Sbjct: 345 LNRAQSLSLEISEHNVCTHTILICE-MCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLIN 403
Query: 303 GLCEINRVLEAFGL 316
GLC+ + +A L
Sbjct: 404 GLCKAKNLEKAKNL 417
>Medtr7g082160.1 | PPR containing plant-like protein | HC |
chr7:31475033-31473081 | 20130731
Length = 578
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 9/189 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P T L+ C GN +EA+KV ++ ++T YSI+I+ LC +
Sbjct: 334 NSGLLPSTFVVFRLMSELCRLGNTEEAVKVLRIVEEKKLTCVQEGYSIVIKALCDHRRVE 393
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDP 122
+A KLF + E G +P Y + LC+ G A V + K R D
Sbjct: 394 EAGKLFGRMLE-------IGLKPKLVVYNSVISMLCKLGDLDNANGVFEIMNKNRCFPDS 446
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++Y+ +I C ++ YELL+ ML ++P Y+ L+D L++ L LE+
Sbjct: 447 ITYIALIHAQCACKNWKVAYELLMEMLGLGWIPHFHTYN-LVDSLLREHDQLDLCHKLER 505
Query: 183 MLKSSYLPK 191
L++ L K
Sbjct: 506 KLENQKLLK 514
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 127/285 (44%), Gaps = 21/285 (7%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG PD ++N L+ ++ G + E++ VF M+ +SA+YSIL+ + G YD
Sbjct: 308 GGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSILLNLYGKHGRYDD 367
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
LF E+ + P A +Y + Q E G ++ + ++ + +
Sbjct: 368 VRDLFLEMKVSN-------TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVDENIEPNME 420
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQK---DKPLLAMETL 180
+Y +I + G +E+ ++L+ M + +P + Y +I+ + Q ++ L+A T+
Sbjct: 421 TYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEALVAFNTM 480
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
++ + P T++S++ G E + M + + ++++ IE L
Sbjct: 481 NEVGST---PTVETYNSLVCSFSRGGLYKEVEAILFRMSESGLPRDVHSFNGVIEALRQA 537
Query: 241 GHRDKAFEI-VELLYKKGFC----VKIEEVVQFLCKRGKLPEARK 280
G ++A + VE+ +K C E V+ C G + E+ +
Sbjct: 538 GQYEEAVKAHVEM--EKANCDPNESTFEAVLSIYCSAGLVDESEE 580
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 130/312 (41%), Gaps = 11/312 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+NTL+ + G DEA VF M V D +YS L+ G +K
Sbjct: 239 GIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYLVHTF---GKLNKL 295
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
EK+ + L E E GS P +SY + + + G +++ V RQ+ + G + +
Sbjct: 296 EKVSELLREME----SGGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSAT 351
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ + + G Y++ +L + M + PD Y+ LI F + + M+
Sbjct: 352 YSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMV 411
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T+ ++ + G ++ ++ + M ++ I + T IE +
Sbjct: 412 DENIEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYE 471
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLC--KRGKLPEARKLLLFSLKNHH-NVDIDLCNAVI 301
+A + + G +E +C RG L + + +LF + D+ N VI
Sbjct: 472 EALVAFNTMNEVGSTPTVETYNSLVCSFSRGGLYKEVEAILFRMSESGLPRDVHSFNGVI 531
Query: 302 LGLCEINRVLEA 313
L + + EA
Sbjct: 532 EALRQAGQYEEA 543
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 143/347 (41%), Gaps = 14/347 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEA--LKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
SP T+NT+I++ C+ G LD L +F M++ + D +Y+ L+ RG D+A
Sbjct: 205 SPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEA 263
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
E +F + E +V P +Y + + K K +LR++ G+ D S
Sbjct: 264 EMVFRTMNEGGVV-------PDINTYSYLVHTFGKLNKLEKVSELLREMESGGSLPDVSS 316
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ + G + + M +P+ Y L++ + + + + +M
Sbjct: 317 YNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSILLNLYGKHGRYDDVRDLFLEMK 376
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
S+ P T++ ++ E G+ E + M+D NI N+ I G +
Sbjct: 377 VSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVDENIEPNMETYEGLIFACGKGGLFE 436
Query: 245 KAFEIVELLYKKGFCVKIEEVVQFLCKRGKLP-EARKLLLFSLKNH--HNVDIDLCNAVI 301
A +I+ + +KG + + G+ L+ F+ N ++ N+++
Sbjct: 437 DAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSTPTVETYNSLV 496
Query: 302 LGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
E + + + E GL +++ N ++ AL G+ EEA
Sbjct: 497 CSFSRGGLYKEVEAILFRMSESGLPRDVHSFNGVIEALRQAGQYEEA 543
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G G PD T+NTLI + NL EA+ VF +M++ + D +Y+ +I + G
Sbjct: 328 GKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFA 387
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
KAE LF++L G P A +Y + + G T K + +++K G +D
Sbjct: 388 LKAEHLFEKLKSN-------GFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKD 440
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y T+I + + G ++ L M PD Y LID + K A + +
Sbjct: 441 EMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMS 500
Query: 182 KMLKSSYLPKTSTWHSIL 199
+ML + P T+ +++
Sbjct: 501 EMLDAGVKPTLHTYSALI 518
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 123/277 (44%), Gaps = 15/277 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D T+NT+IH + G DEAL+++ +MK+ D+ +Y++LI L + ++A
Sbjct: 436 GFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEA 495
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
K+ E+ + G +P +Y + + G+ +AE ++ + G + D L+
Sbjct: 496 SKVMSEMLDA-------GVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLA 548
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ R + L M+ F PD +Y+ ++ ++++ + +E+++
Sbjct: 549 YSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMG----DVIERVV 604
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ + + H I + L++ G A++ + + + + +
Sbjct: 605 QDTKELGSMNPHDISSVLVKGGCYDHGAKMLKVAISNGYELDREIFLSIMSSYSSSARYS 664
Query: 245 KAFEIVELLYKKG---FCVKIEEVVQFLCKRGKLPEA 278
+A E+VE + + E ++ LCK GKL A
Sbjct: 665 EACELVEFFREHAPDDIQMITEALIIILCKAGKLDAA 701
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 29/193 (15%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M D G +PD T+NTLI +C +E L + MK+ + +Y +I ++
Sbjct: 989 MIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQ 1048
Query: 61 DYDKAEKLFDELFEKEI----------------------------VLCKFGSQPLAASYK 92
YD+AE+LF+EL ++ + G +P A+
Sbjct: 1049 LYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMH 1108
Query: 93 PIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRR 151
+ + G+ +A+R+L+ + G D L Y +VI + ++G + G E L M
Sbjct: 1109 LLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEA 1168
Query: 152 DFLPDVEIYDCLI 164
PD I+ C I
Sbjct: 1169 AIEPDHRIWTCFI 1181
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 146/363 (40%), Gaps = 52/363 (14%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
FN ++ S + + A+ + M+ + D + SILI CQ G + A + ++
Sbjct: 57 FNKILSSLAKLNHFNIAISFSQQMELKGIQPDIFTLSILINCFCQLGQINFAFSILGKIL 116
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGH 132
K G +P + + + LC +G+ RKA ++ +G + +SY T+I G
Sbjct: 117 -------KLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGL 169
Query: 133 CREGAYENGYELL-----IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
C+ G +LL + ++R PDV +Y +ID F + + A + +M+
Sbjct: 170 CKSGETRAALQLLRKIEGLLLVR----PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKK 225
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T++S++ G E+ + M+ +N N+ ++ L G +A
Sbjct: 226 IYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAK 285
Query: 248 EIVELLYKK--------------GFCV-----KIEEVVQFLCKRGKLPEARKLLLFSLKN 288
++ ++ K+ G+ + K V L +RG P R
Sbjct: 286 SVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSY------- 338
Query: 289 HHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+ +I GLC++ V EA L E+ K L N L+ L G++ +
Sbjct: 339 ---------SVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDV 389
Query: 349 AFI 351
++
Sbjct: 390 WYL 392
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 120/276 (43%), Gaps = 13/276 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ TFN+LI+ C G +EA+ +F M + +++IL+ LC+ G+ +A+ +
Sbjct: 228 PNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSV 287
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
+ ++ + +P +Y + + KA V + +RG T + SY
Sbjct: 288 LTVMIKQHV-------EPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSV 340
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM-LKS 186
+I G C+ + L M + P+ Y+ LIDG + + +++M +K
Sbjct: 341 MINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKD 400
Query: 187 -SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
P T+ ++ RL + G ++ + M DR N+ T I+ L + + DK
Sbjct: 401 LGVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDK 460
Query: 246 AFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEA 278
A + + G + ++ LCK G++ +A
Sbjct: 461 AIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADA 496
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 165/406 (40%), Gaps = 50/406 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T + LI+ C G ++ A + + ++ + + LI+ LC G+ KA
Sbjct: 84 GIQPDIFTLSILINCFCQLGQINFAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKA 143
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI----------- 114
+++ K L + SY + LC+ G+TR A ++LR+I
Sbjct: 144 LYFHNDVIAKGFYLNE-------VSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVI 196
Query: 115 --------------------------MKRGTQDPLSYMTVIMGHCREGAYENGYELLIWM 148
+K+ + +++ ++I G C G +E L M
Sbjct: 197 MYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEM 256
Query: 149 LRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFP 208
+ ++ P+V ++ L+DG ++ + A L M+K P T++S++
Sbjct: 257 ILKNTNPNVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEV 316
Query: 209 HESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEV 265
+++ V + R + N+ + I L D+A + + ++ K + +
Sbjct: 317 NKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSL 376
Query: 266 VQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL--GLCEINRVLEAFGLCYELVEK 323
+ LCK G++ + L+ V D+ IL LC+ R+ +A+ L E+ ++
Sbjct: 377 IDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDR 436
Query: 324 GLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYS 369
G + L+ L +++A + ++ L ++ +V +Y+
Sbjct: 437 GQPANVVTYTSLIDGLCKNHNLDKAIALFTKMKDL-GVEPNVYTYN 481
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+ +++ +I+ C +DEA+ +F+ M + +T ++ +Y+ LI LC+ G
Sbjct: 330 GVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDV 389
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
L DE+ K++ G +P +Y + LC+ G+ A ++ ++ RG + ++
Sbjct: 390 WYLIDEMQIKDL-----GVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDRGQPANVVT 444
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLID 165
Y ++I G C+ + L M P+V Y+ LID
Sbjct: 445 YTSLIDGLCKNHNLDKAIALFTKMKDLGVEPNVYTYNILID 485
>Medtr7g072070.1 | PPR containing plant-like protein | HC |
chr7:26781971-26778389 | 20130731
Length = 492
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 9/274 (3%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
+F LI + C +D A+K+ M D S++I +LC++ D E L
Sbjct: 185 SFWVLIKALCRIKRVDYAIKMMNCMVEDGYCLDDKICSLIISSLCEQNDLTSVEALVVWG 244
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
+++ C P + ++L + GK A +L Q+ + G + D + Y V+ G
Sbjct: 245 NMRKLGFC-----PGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSG 299
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
+EG Y EL +L +PDV Y+ I+G +++ A++ + M K P
Sbjct: 300 IVKEGDYVKLDELFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPN 359
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T++++L L G ++ RV M + + N++ ++ L G G +A ++E
Sbjct: 360 VVTYNTLLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLE 419
Query: 252 LLYKKGFCVK---IEEVVQFLCKRGKLPEARKLL 282
+ +K F + + +V +C++G + +A L+
Sbjct: 420 EMLEKCFYPRSSTFDSIVHQMCQKGLISDALVLM 453
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P +I G +AL++ +K + D Y+I++ + + GDY K
Sbjct: 250 GFCPGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKEGDYVKL 309
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
++LFDE+ G P +Y LC+ +A +++ + K G + + ++
Sbjct: 310 DELFDEIL-------VLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVT 362
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T++ C G ++ M + ++ Y ++DG + K + A LE+ML
Sbjct: 363 YNTLLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEML 422
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
+ + P++ST+ SI+ ++ +KG ++ ++++++ + ++ + K E L
Sbjct: 423 EKCFYPRSSTFDSIVHQMCQKGLISDA----LVLMNKIVAKSFDPGAKVWEALL 472
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G PD + ++ G+ + ++F+ + + D +Y++ I LC++ ++D
Sbjct: 283 EDGIKPDIVCYTIVLSGIVKEGDYVKLDELFDEILVLGLVPDVYTYNVYINGLCKQNNFD 342
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+A K+ + + K G +P +Y + LC G KA+RV++++ +G + L
Sbjct: 343 EALKIV-------VSMEKLGCKPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGVELNL 395
Query: 124 -SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y ++ G +G LL ML + F P +D ++ QK A+ + K
Sbjct: 396 HTYRIMLDGLVGKGEIGEACVLLEEMLEKCFYPRSSTFDSIVHQMCQKGLISDALVLMNK 455
Query: 183 MLKSSYLPKTSTWHSIL 199
++ S+ P W ++L
Sbjct: 456 IVAKSFDPGAKVWEALL 472
>Medtr7g029515.1 | PPR containing plant protein | HC |
chr7:10579080-10580534 | 20130731
Length = 484
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 146/321 (45%), Gaps = 16/321 (4%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T ++ A +A+++F++++ + ++ S ++L+ LC+ ++A +++ EL
Sbjct: 139 TIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL 198
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTVIMG 131
K P A ++ + C + +A ++++ G + +SY T+I
Sbjct: 199 --------KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC 250
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
+C+E ++ Y+LL M ++ P+V Y ++ + +K A++ +E+M P
Sbjct: 251 YCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPD 310
Query: 192 TSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV 250
T ++S + L G ++ V V M N+ N + + + + ++AF I+
Sbjct: 311 TLFFNSFIYTLGRAGRIDDATYVFKVAMPKANVAPNTSTYNSMVSMFCYYAREERAFGIL 370
Query: 251 ELLYKKGFCVKIEEVVQFLCKRG-KLPEARKLL---LFSLKNHHNVDIDLCNAVIL--GL 304
+ + K G C + L K K+ E L L + N + + +DL +L GL
Sbjct: 371 KEMEKSGLCKPDIQTFHPLIKSCFKMREIDTWLNDILNDMVNKYQIGLDLSTYSLLIHGL 430
Query: 305 CEINRVLEAFGLCYELVEKGL 325
C +R AF L E+V++ +
Sbjct: 431 CRADRCKWAFDLFEEMVDQDI 451
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LIH C+ ++EA + MK + SYS +I+ CQ ++D+
Sbjct: 203 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 262
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L DE+ + P +Y I L + K +A +V+ ++ G + D L +
Sbjct: 263 LLDEMQAQ-------NCSPNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFN 315
Query: 127 TVIMGHCREGAYENG-YELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+ I R G ++ Y + M + + P+ Y+ ++ F + A L++M K
Sbjct: 316 SFIYTLGRAGRIDDATYVFKVAMPKANVAPNTSTYNSMVSMFCYYAREERAFGILKEMEK 375
Query: 186 SSYL-PKTSTWHSIL 199
S P T+H ++
Sbjct: 376 SGLCKPDIQTFHPLI 390
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 157/345 (45%), Gaps = 21/345 (6%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
+ CT LI C G + EA ++F M+ +++ LI LC+ + +KA+ LF
Sbjct: 359 NVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLF 418
Query: 70 DEL-----FEKEIVLCKFGSQPLAASYKPI--FQYLCEHGKTRKAERVLRQIMKRGTQDP 122
+L + L + GS ++ S + + + +CE G+ +A +++ + D
Sbjct: 419 CKLEVGRRHSLHLSLSQ-GSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDI 477
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDF-LPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y ++ C + Y ++ ++ + PD Y +I G D+ A + +
Sbjct: 478 ITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQ 537
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLD--RNIRQNINLSTKSIE-LLF 238
+M K+ P S + +++ L K + +R + + +++ N S ++E LF
Sbjct: 538 RMQKTGSEPTLSVYRTLMTCLCRKS---KVSRAFTLYFEHLKSLPSRDNDSISALEKYLF 594
Query: 239 GHGHRDKAFEIVELLYK-KGFCVKIEEVVQF-LCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G ++EL +K + F + ++ C+ GK+ EA L++ S+ + N+ I+
Sbjct: 595 GEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEA--LIILSVLDEFNIKINA 652
Query: 297 --CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
C +I GLC+ R+ +A + +EKG + N L+T L
Sbjct: 653 TSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFMLKPMICNHLLTCL 697
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 13/311 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD +NT++ + L+ AL ++ M V + +Y++LI C+RG+ A
Sbjct: 114 GIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGA 173
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--L 123
+++ DE+ IV P S I C+ +A ++ MK + P +
Sbjct: 174 QEMLDEMKRVGIV-------PCVLSTTSILYGCCQANNVDEAHKLFND-MKETSYPPDMI 225
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRD-FLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
S V+ G C+ G E +WM++ D F + Y LI+ F + + A K
Sbjct: 226 SCNVVLNGFCKMGRLEEALS-FVWMIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTK 284
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M K +P + ++ L ++G E+A++ M + + I+ L G
Sbjct: 285 MFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGL 344
Query: 243 RDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
++A + + + C + + +CKRG + EA++L K + N +I
Sbjct: 345 LNRAQSLRLEISEHNVCTHTILICE-MCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLIN 403
Query: 303 GLCEINRVLEA 313
GLC+ N + +A
Sbjct: 404 GLCKANNLEKA 414
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 11/247 (4%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
T+NTL+ +C A +++A VF + ++T SY I+I LC+ D+A LF E+
Sbjct: 83 TYNTLMDGYCLANEVNKAKNVFNVIGKRRMTPYVFSYIIIINGLCKIKMVDEALNLFTEM 142
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMTVIMG 131
CK P +Y + LC+ G+ A +L Q+ RG D ++Y + +
Sbjct: 143 H------CK----PNTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVITYNSFLHA 192
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
C+ + L+ + + P++ Y LIDG ++ + A + +L Y
Sbjct: 193 LCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVT 252
Query: 192 TSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
T+ ++ L +G E+ + M D N I LF + DKA +++
Sbjct: 253 LWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATIIHALFKNDENDKAEKLLR 312
Query: 252 LLYKKGF 258
+ +G
Sbjct: 313 EMIARGL 319
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 8/182 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+T T+N+LI C +G + A ++ + M + AD +Y+ + LC+ DKA L
Sbjct: 146 PNTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVITYNSFLHALCKNHQVDKAIAL 205
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMT 127
++ ++ G QP +Y + LC+ G+ A+ + + ++ +G + L +Y
Sbjct: 206 VKKIKDQ-------GIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLWTYTI 258
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+I G C EG ++ LL M +P+ Y +I + D+ A + L +M+
Sbjct: 259 MINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATIIHALFKNDENDKAEKLLREMIARG 318
Query: 188 YL 189
L
Sbjct: 319 LL 320
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 28/143 (19%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G D T+N+ +H+ C +D+A+ + + +K+ + + +YSILI LC+ G +
Sbjct: 176 DRGQPADVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLE 235
Query: 64 KAEKLFDELFEK--EIVLCKF--------------------------GSQPLAASYKPIF 95
A+ +F +L K ++ L + G P A +Y I
Sbjct: 236 NAQVIFQDLLIKGYKVTLWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATII 295
Query: 96 QYLCEHGKTRKAERVLRQIMKRG 118
L ++ + KAE++LR+++ RG
Sbjct: 296 HALFKNDENDKAEKLLREMIARG 318
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 7/200 (3%)
Query: 87 LAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELL 145
+ +Y + C + KA+ V I KR T SY+ +I G C+ + L
Sbjct: 80 VXVTYNTLMDGYCLANEVNKAKNVFNVIGKRRMTPYVFSYIIIINGLCKIKMVDEALNLF 139
Query: 146 IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
M + P+ Y+ LIDG + + A E L++M T++S L L +
Sbjct: 140 TEMHCK---PNTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVITYNSFLHALCKN 196
Query: 206 GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE- 264
++ + + D+ I+ NIN + I+ L G + A I + L KG+ V +
Sbjct: 197 HQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLWTY 256
Query: 265 --VVQFLCKRGKLPEARKLL 282
++ LC G EA LL
Sbjct: 257 TIMINGLCLEGLFDEAMTLL 276
>Medtr6g071320.1 | PPR containing plant-like protein | HC |
chr6:26368240-26366732 | 20130731
Length = 484
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 174/400 (43%), Gaps = 64/400 (16%)
Query: 11 TCTFNTLIHSHCSAGNLDEALKVF-ENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T +FNTL+ + L++A +F E+ ++V + + ++L+ LC++ D A ++F
Sbjct: 97 TQSFNTLLKIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIF 156
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-----RQIMKRGTQDPLS 124
E+ ++ P SY + + LC+ + +A +L R +K +D +
Sbjct: 157 QEMDYQDCY-------PNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVI 209
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI-----DGFLQKDKPLLAMET 179
Y T++ C G ++ E+L +LR+ Y+ L DG KD +
Sbjct: 210 YRTLLDALCDNGKFDEAVEILGKILRKGLKAPKRCYNRLDITQCGDG---KDVEVTKRWI 266
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
E +++ S +P T+++ S+ L E+G E+ +V + M DR R ++ + L
Sbjct: 267 HEALVRGS-VPSTASYTSMAVDLYEEGKIDEADKVIIEMKDRRFRPKHSIFEAKVAALCK 325
Query: 240 HGHRDKAFEIVE------------------------------------LLYKKGFCVKIE 263
G D+A +++E + KK C+ +
Sbjct: 326 VGKVDEAIKVIEEDMVEVNCLPNARVYTILLKNIRSVGNSTSVLESLNKMSKKVNCMADK 385
Query: 264 E----VVQFLCKRGKLPEARKLL-LFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCY 318
E +++ LC+ GK +A +LL S+K++ + N +I GLC + R EA
Sbjct: 386 ETYCILLEMLCREGKYLQASQLLEQMSIKSYWP-SANSYNLLIEGLCSLGRQYEAVMWLE 444
Query: 319 ELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGL 358
+++ +G E++ N L ++ G ++ +A RI L
Sbjct: 445 DMISQGKLPEISVWNSLASSFCNSGMMKVSAETFNRIKSL 484
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 8/209 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T ++ ++ G +DEA KV MK+ + + + + LC+ G D+A
Sbjct: 273 GSVPSTASYTSMAVDLYEEGKIDEADKVIIEMKDRRFRPKHSIFEAKVAALCKVGKVDEA 332
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT--QDPL 123
K+ +E + + P A Y + + + G + L ++ K+ D
Sbjct: 333 IKVIEE------DMVEVNCLPNARVYTILLKNIRSVGNSTSVLESLNKMSKKVNCMADKE 386
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++ CREG Y +LL M + + P Y+ LI+G + A+ LE M
Sbjct: 387 TYCILLEMLCREGKYLQASQLLEQMSIKSYWPSANSYNLLIEGLCSLGRQYEAVMWLEDM 446
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESA 212
+ LP+ S W+S+ + G SA
Sbjct: 447 ISQGKLPEISVWNSLASSFCNSGMMKVSA 475
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVF-ENMKNFQVTADSASYSILIRNLCQRGDY 62
D F P F + + C G +DEA+KV E+M ++ Y+IL++N+ G+
Sbjct: 306 DRRFRPKHSIFEAKVAALCKVGKVDEAIKVIEEDMVEVNCLPNARVYTILLKNIRSVGNS 365
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQD 121
+ +++ +K V C + +Y + + LC GK +A ++L Q+ +K
Sbjct: 366 TSVLESLNKMSKK--VNCMADKE----TYCILLEMLCREGKYLQASQLLEQMSIKSYWPS 419
Query: 122 PLSYMTVIMGHCREGAYENGYELLIW---MLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
SY +I G C G YE ++W M+ + LP++ +++ L F ++ E
Sbjct: 420 ANSYNLLIEGLCSLG---RQYEAVMWLEDMISQGKLPEISVWNSLASSFCNSGMMKVSAE 476
Query: 179 TLEKM 183
T ++
Sbjct: 477 TFNRI 481
>Medtr4g068800.4 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +++ LI + C G +++ K++E M+ ++ AD SY+ +I C+ GD +A
Sbjct: 274 GCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRA 333
Query: 66 EKLFDEL------------------------FEKEIVLCK----FGSQPLAASYKPIFQY 97
E+ + E+ E +++ K +P A++ + +
Sbjct: 334 EEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRL 393
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPL--SYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
LC G+ +A + LR + + P SY +I G C EG + +L ML + F
Sbjct: 394 LCYKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQL 453
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+ EIY+ IDG++++ +A ++ML++
Sbjct: 454 NSEIYEVFIDGYVRQGSEEMAEALRKEMLQT 484
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +FNT + +G +++ +++ M ++ SYS+LI C G + EK+
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMT 127
++E+ +KEI + SY I C+ G +AE R++ G +S Y
Sbjct: 302 WEEMRKKEI-------EADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEH 354
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML-KS 186
++ G+C E+ + MLR+DF PD D ++ K + AM+ L + K
Sbjct: 355 LVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKF 414
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+PK ++ +++ +G E+ ++ ML + + N
Sbjct: 415 DLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLN 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFE-----------------NMKNFQVTADSA- 47
G SP T N LI C +D +++ + F+V +
Sbjct: 186 GISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPNVH 245
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
S++ + Q G +K E++++E+ E G P A SY + C+ G+
Sbjct: 246 SFNTFMLCCYQSGLVEKVEEIWNEMSE-------MGCDPNAYSYSLLIAAFCDGGRMEDC 298
Query: 108 ERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
E++ ++ K+ + D +SY T+I G C+ G E M V Y+ L+ G
Sbjct: 299 EKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKG 358
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
+ + A+ + ML+ + P ST ++ L KG E+ +
Sbjct: 359 YCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMK 405
>Medtr4g068800.3 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +++ LI + C G +++ K++E M+ ++ AD SY+ +I C+ GD +A
Sbjct: 274 GCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRA 333
Query: 66 EKLFDEL------------------------FEKEIVLCK----FGSQPLAASYKPIFQY 97
E+ + E+ E +++ K +P A++ + +
Sbjct: 334 EEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRL 393
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPL--SYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
LC G+ +A + LR + + P SY +I G C EG + +L ML + F
Sbjct: 394 LCYKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQL 453
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+ EIY+ IDG++++ +A ++ML++
Sbjct: 454 NSEIYEVFIDGYVRQGSEEMAEALRKEMLQT 484
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +FNT + +G +++ +++ M ++ SYS+LI C G + EK+
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMT 127
++E+ +KEI + SY I C+ G +AE R++ G +S Y
Sbjct: 302 WEEMRKKEI-------EADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEH 354
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML-KS 186
++ G+C E+ + MLR+DF PD D ++ K + AM+ L + K
Sbjct: 355 LVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKF 414
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+PK ++ +++ +G E+ ++ ML + + N
Sbjct: 415 DLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLN 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFE-----------------NMKNFQVTADSA- 47
G SP T N LI C +D +++ + F+V +
Sbjct: 186 GISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPNVH 245
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
S++ + Q G +K E++++E+ E G P A SY + C+ G+
Sbjct: 246 SFNTFMLCCYQSGLVEKVEEIWNEMSE-------MGCDPNAYSYSLLIAAFCDGGRMEDC 298
Query: 108 ERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
E++ ++ K+ + D +SY T+I G C+ G E M V Y+ L+ G
Sbjct: 299 EKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKG 358
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
+ + A+ + ML+ + P ST ++ L KG E+ +
Sbjct: 359 YCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMK 405
>Medtr4g068800.5 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +++ LI + C G +++ K++E M+ ++ AD SY+ +I C+ GD +A
Sbjct: 274 GCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRA 333
Query: 66 EKLFDEL------------------------FEKEIVLCK----FGSQPLAASYKPIFQY 97
E+ + E+ E +++ K +P A++ + +
Sbjct: 334 EEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRL 393
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPL--SYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
LC G+ +A + LR + + P SY +I G C EG + +L ML + F
Sbjct: 394 LCYKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQL 453
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+ EIY+ IDG++++ +A ++ML++
Sbjct: 454 NSEIYEVFIDGYVRQGSEEMAEALRKEMLQT 484
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +FNT + +G +++ +++ M ++ SYS+LI C G + EK+
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMT 127
++E+ +KEI + SY I C+ G +AE R++ G +S Y
Sbjct: 302 WEEMRKKEI-------EADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEH 354
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML-KS 186
++ G+C E+ + MLR+DF PD D ++ K + AM+ L + K
Sbjct: 355 LVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKF 414
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+PK ++ +++ +G E+ ++ ML + + N
Sbjct: 415 DLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLN 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFE-----------------NMKNFQVTADSA- 47
G SP T N LI C +D +++ + F+V +
Sbjct: 186 GISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPNVH 245
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
S++ + Q G +K E++++E+ E G P A SY + C+ G+
Sbjct: 246 SFNTFMLCCYQSGLVEKVEEIWNEMSE-------MGCDPNAYSYSLLIAAFCDGGRMEDC 298
Query: 108 ERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
E++ ++ K+ + D +SY T+I G C+ G E M V Y+ L+ G
Sbjct: 299 EKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKG 358
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
+ + A+ + ML+ + P ST ++ L KG E+ +
Sbjct: 359 YCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMK 405
>Medtr4g068800.2 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +++ LI + C G +++ K++E M+ ++ AD SY+ +I C+ GD +A
Sbjct: 274 GCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRA 333
Query: 66 EKLFDEL------------------------FEKEIVLCK----FGSQPLAASYKPIFQY 97
E+ + E+ E +++ K +P A++ + +
Sbjct: 334 EEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRL 393
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPL--SYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
LC G+ +A + LR + + P SY +I G C EG + +L ML + F
Sbjct: 394 LCYKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQL 453
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+ EIY+ IDG++++ +A ++ML++
Sbjct: 454 NSEIYEVFIDGYVRQGSEEMAEALRKEMLQT 484
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +FNT + +G +++ +++ M ++ SYS+LI C G + EK+
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMT 127
++E+ +KEI + SY I C+ G +AE R++ G +S Y
Sbjct: 302 WEEMRKKEI-------EADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEH 354
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML-KS 186
++ G+C E+ + MLR+DF PD D ++ K + AM+ L + K
Sbjct: 355 LVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKF 414
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+PK ++ +++ +G E+ ++ ML + + N
Sbjct: 415 DLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLN 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFE-----------------NMKNFQVTADSA- 47
G SP T N LI C +D +++ + F+V +
Sbjct: 186 GISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPNVH 245
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
S++ + Q G +K E++++E+ E G P A SY + C+ G+
Sbjct: 246 SFNTFMLCCYQSGLVEKVEEIWNEMSE-------MGCDPNAYSYSLLIAAFCDGGRMEDC 298
Query: 108 ERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
E++ ++ K+ + D +SY T+I G C+ G E M V Y+ L+ G
Sbjct: 299 EKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKG 358
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
+ + A+ + ML+ + P ST ++ L KG E+ +
Sbjct: 359 YCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMK 405
>Medtr2g037740.1 | PPR containing plant-like protein | HC |
chr2:16348803-16345332 | 20130731
Length = 1070
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 149/359 (41%), Gaps = 20/359 (5%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQ--VTADSASYSILIRNLCQRGDYDKAEKLFD 70
F +I C+ G++ +A++V E M ++ D S ++ + G + + FD
Sbjct: 130 VFCCVIQRFCNVGHVGKAIEVVELMNEYRKDYPFDDFVCSSVVSAFSRAGKPELSLWFFD 189
Query: 71 ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVI 129
GS+P +Y + LC+ G+ + ++R++ + G D + Y +
Sbjct: 190 NFM---------GSRPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWV 240
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
G+ E + + M+ + D Y LIDGF + + L KM+K +
Sbjct: 241 CGYVEEKVLVEVFRKMREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGII 300
Query: 190 PKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
P T+ +I++ +KG E+ + V M D I + + I+ G D+ F++
Sbjct: 301 PNKVTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQL 360
Query: 250 VELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCE 306
+ + K+G V VV L K G+ EA + + D+ + ++ G E
Sbjct: 361 LVEMEKRGIGPNVVTYNAVVNGLSKYGRTQEADE-----FSKNVTADVVTYSTLLHGYTE 415
Query: 307 INRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSV 365
+ VL L E G+ ++ N L+ AL E+ + K +P ++ + S+
Sbjct: 416 EDNVLGILQTKKRLEEAGISMDVVMCNVLIRALFMMQAYEDVYALYKGMPEMDLVPNSI 474
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 135/336 (40%), Gaps = 37/336 (11%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G D ++ + + L E + M + D SY+ILI + GD +
Sbjct: 226 EDGLDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKGICHDFVSYTILIDGFSKLGDVE 285
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
K+ ++ ++ I+ P +Y I C+ G+ +A + ++ G + D
Sbjct: 286 KSFTFLAKMIKEGII-------PNKVTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDE 338
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
++ +I G R G ++ ++LL+ M +R P+V Y+ +++G + + A E
Sbjct: 339 FVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNAVVNGLSKYGRTQEADE---- 394
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQ-NINLSTKSIELLFGHG 241
K T + L G+ E + ++ + + + I++ +L
Sbjct: 395 ------FSKNVTADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDVVMCNVLIRAL 448
Query: 242 HRDKAFEIVELLYKK-----------GFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHH 290
+A+E V LYK +C I+ CK GK+ EA L +F
Sbjct: 449 FMMQAYEDVYALYKGMPEMDLVPNSITYCTMIDG----YCKVGKINEA--LEVFDDFRKT 502
Query: 291 NVDIDLC-NAVILGLCEINRVLEAFGLCYELVEKGL 325
++ C N++I GLC+ V A EL KGL
Sbjct: 503 SISSYACYNSIINGLCKKGMVEMAIEALLELDHKGL 538
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 32/271 (11%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
+ +IH C G L++AL + ++ V + Y+ +I LC G +A +LFD L
Sbjct: 717 YGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLE 776
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMTVIMGH 132
+ ++ + +Y + LC G + AE V ++++ G Q Y ++++
Sbjct: 777 KLNLMTSEI-------TYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVAT 829
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
+ G E +ELL M ++ D +I+ + QK A+E K P
Sbjct: 830 SKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKDISPDF 889
Query: 193 STWHSILARLLEKGFPHESARVTVMML-DRNIRQNINLSTKSIELLFGHGHRDKAFEIVE 251
+ ++ L KG E+ V ML +N+ + IN+ ++
Sbjct: 890 LGFLYMIRGLCTKGRMEETRSVLREMLQSKNVAEMINIVNSRVD---------------- 933
Query: 252 LLYKKGFCVKIEEVVQFLCKRGKLPEARKLL 282
+ C + + LC +G++ EA K+L
Sbjct: 934 ---TESIC----DFIAALCDQGRIQEAVKVL 957
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 161/403 (39%), Gaps = 53/403 (13%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+ D T++TL+H + N+ L+ + ++ ++ D ++LIR L Y+
Sbjct: 400 TADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDVVMCNVLIRALFMMQAYEDVYA 459
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMT 127
L+ + E ++V P + +Y + C+ GK +A V K Y +
Sbjct: 460 LYKGMPEMDLV-------PNSITYCTMIDGYCKVGKINEALEVFDDFRKTSISSYACYNS 512
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLA------METLE 181
+I G C++G E E L+ + + + D + L+ +++ + ME+LE
Sbjct: 513 IINGLCKKGMVEMAIEALLELDHKGLMLDTGTHRLLMKTIFKENSSKVVLDLVCRMESLE 572
Query: 182 ------------------KMLKSSY----------LPKT-STWHSILARLLEKGFPHESA 212
+L +Y LP T ++HS+L RLL
Sbjct: 573 LDIYNAICNDSIFLLCKRGLLDDAYQLWMAMKKKGLPVTCKSYHSLLRRLL----CVVGN 628
Query: 213 RVTVMMLDRNIRQNINLSTKSIELLFGH----GHRDKAFEIV-ELLYKKGFCVKIEEVVQ 267
R ++ L + L ++ + D A + + Y +++
Sbjct: 629 REQILPLLNCFLKEYGLVEPKVQKVLAQYICLKDVDSALRFLGKTSYNSSAVTFPVSILK 688
Query: 268 FLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQ 327
L K G+ +A KLL+ + + +D VI GLC+ + +A LC + +KG++
Sbjct: 689 VLIKEGRALDAYKLLMGVQDDLPVMYVDY-GVVIHGLCKGGYLNKALDLCTLIEKKGVNL 747
Query: 328 ELTCLNDLVTALEARGKVEEAAFISKRIPGLENLDRSVLSYSS 370
+ N ++ L G + EA + + L NL S ++Y++
Sbjct: 748 NIVIYNSIINGLCHDGCLIEAFRLFDSLEKL-NLMTSEITYAT 789
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 152/382 (39%), Gaps = 55/382 (14%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASY-SILIRNLCQRGDYDKAEKLFDELF 73
N I C G LD+A +++ MK + SY S+L R LC G+ ++ L + F
Sbjct: 581 NDSIFLLCKRGLLDDAYQLWMAMKKKGLPVTCKSYHSLLRRLLCVVGNREQILPLLN-CF 639
Query: 74 EKEIVLCKFGSQPLAASY--------------------------KPIFQYLCEHGKTRKA 107
KE L + Q + A Y I + L + G+ A
Sbjct: 640 LKEYGLVEPKVQKVLAQYICLKDVDSALRFLGKTSYNSSAVTFPVSILKVLIKEGRALDA 699
Query: 108 ERVLRQIMKRGTQDPL-----SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDC 162
++L G QD L Y VI G C+ G +L + ++ ++ IY+
Sbjct: 700 YKLLM-----GVQDDLPVMYVDYGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNS 754
Query: 163 LIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRN 222
+I+G + A + + K + + T+ +++ L +G+ ++ V M+
Sbjct: 755 IINGLCHDGCLIEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNG 814
Query: 223 IRQNINLSTKSIELLFGHGHRDKAFEI---VELLYKKGFCVKIEEVVQFLCKRGKLPEAR 279
+ + + G +KAFE+ +E Y K + V+ C++G + A
Sbjct: 815 FQPKTQVYNSLLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGAL 874
Query: 280 KLLLFSLKNHHNVDIDLCN--AVILGLCEINRVLEAFGLCYELVE-KGLHQELTCLN--- 333
+ + K ++ D +I GLC R+ E + E+++ K + + + +N
Sbjct: 875 E-FYYKFKG-KDISPDFLGFLYMIRGLCTKGRMEETRSVLREMLQSKNVAEMINIVNSRV 932
Query: 334 ------DLVTALEARGKVEEAA 349
D + AL +G+++EA
Sbjct: 933 DTESICDFIAALCDQGRIQEAV 954
>Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:41625715-41628184 | 20130731
Length = 796
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 145/357 (40%), Gaps = 30/357 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQR-GDYDK 64
G P+ N LI+ ++ A ++F+ +K+ + + +Y+I+I+ L + GD +
Sbjct: 189 GILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQ 248
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A +FDE+ E G P + Y + LC + ++ +LR + + D
Sbjct: 249 ASGVFDEMKEA-------GVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVY 301
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y VI G C E + ++ M + +PD +Y LI G+ + + A++ E M
Sbjct: 302 AYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDM 361
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARV---------TVMMLDRNIRQNINLSTKSI 234
+ IL E G E +RV + + LD + NI +
Sbjct: 362 ILKGIKTNCVIVSCILHCFAEMG---EDSRVVDTFKEVKQSGVFLD-GVAYNIVFDS--- 414
Query: 235 ELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHN 291
LF G D+ ++E L I+ F+ C +GK +A + +
Sbjct: 415 --LFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFK 472
Query: 292 VDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
D+ N + GLC V EA L + +G+ T ++ + GK+EEA
Sbjct: 473 PDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEA 529
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 29/268 (10%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF PD +N L C ++ EA+ + M + V +S ++ I+I C G ++A
Sbjct: 470 GFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEA 529
Query: 66 EKLFDELFEKEI-----VLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
E F+ + ++ + ++ + L +F L G T + L+Q+ K
Sbjct: 530 EGYFNSMKDESVEIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSK---- 585
Query: 121 DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
+ Y V+ C++G + L + L R F PDV Y +I + + A +
Sbjct: 586 --VLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLF 643
Query: 181 EKMLKSSYLPKTSTWHSIL------ARLLE---------KGFPHESARVTVMMLDRNIRQ 225
+ M P T+ +L AR E K P++ + + M DR +
Sbjct: 644 QDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSP 703
Query: 226 NINLSTKSIELLFGHGHRDKAFEIVELL 253
++ + T I+ GH D + + L
Sbjct: 704 DVVIYTVLID---GHIKVDNFEDAIRLF 728
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 150/379 (39%), Gaps = 54/379 (14%)
Query: 6 GFSPDTCTFNTLIHS-HCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P+ T+ +I + G+L +A VF+ MK VT +S Y+ I LC D
Sbjct: 224 GLCPNHHTYAIIIKALGTKGGDLKQASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDL 283
Query: 65 AEKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDP 122
L L E + P+ +Y + + C K KA +V + +R D
Sbjct: 284 GYDLLRALRE--------NNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDC 335
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y ++I G+C+ +L M+ + + I C++ F + + ++T ++
Sbjct: 336 HVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKE 395
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
+ +S ++ + L + G E A + + +I +I T I+ G
Sbjct: 396 VKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGK 455
Query: 243 RDKAFEIVELLYKKGFCVKI--------------------------------------EE 264
DKA+ I + + +KGF + +
Sbjct: 456 PDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKI 515
Query: 265 VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKG 324
+++ C GK+ EA S+K+ +++ A++ G CE + + +++ L +EL +G
Sbjct: 516 IIEGFCSEGKIEEAEGYFN-SMKDE---SVEIYTAMVSGYCEADLIEKSYELFHELSNRG 571
Query: 325 -LHQELTCLNDLVTALEAR 342
QE +CL L L ++
Sbjct: 572 DTAQESSCLKQLSKVLYSK 590
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 150/375 (40%), Gaps = 43/375 (11%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G D +N + S G +DE + E++K+ + D Y+ I+ C +G DK
Sbjct: 399 SGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDK 458
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPL 123
A +F E+ EK G +P +Y + LC + +A +L + +G + +
Sbjct: 459 AYIIFKEMEEK-------GFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNST 511
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ +I G C EG E M +D VEIY ++ G+ + D + E ++
Sbjct: 512 THKIIIEGFCSEGKIEEAEGYFNSM--KD--ESVEIYTAMVSGYCEADLIEKSYELFHEL 567
Query: 184 -------LKSSYLPKTST--WHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSI 234
+SS L + S + +LA L +KG + + L R ++ T I
Sbjct: 568 SNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMI 627
Query: 235 ELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHH---- 290
+ +A ++ + + +G +K + + + GK +AR FS ++
Sbjct: 628 KSYCTMNCLQEAHDLFQDMKSRG--IKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDA 685
Query: 291 ----------------NVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLND 334
+ D+ + +I G +++ +A L E++++GL +
Sbjct: 686 PYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTA 745
Query: 335 LVTALEARGKVEEAA 349
L + L G E A
Sbjct: 746 LFSGLLNSGNSEIAV 760
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEA-----LKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
SP+ T+NTLIH C G L++A L +F M VT D+ SY I+I C+
Sbjct: 52 SPNIVTYNTLIHGFCIVGQLNDAFGLLQLFIFGIMARKGVTPDTDSYIIMINGFCKIKMV 111
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
D+A LF+E+ K+I P +Y + LC G+ A ++ ++ RG Q P
Sbjct: 112 DEAMNLFEEMHCKQIF-------PNVVTYNSLINGLCRSGRISYALELVDEMHDRG-QPP 163
Query: 123 --LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
++Y +++ C+ + L + +D P + Y+ LI G + + A +
Sbjct: 164 NIITYNSILDVLCKNYDVDKAIVFLTKLKDQDIQPSMYTYNILIYGLCKVGRLKDARKVF 223
Query: 181 EKMLKSSYLPKTSTWHSILARLLEKGFPHES 211
E +L T+ ++ KG E+
Sbjct: 224 EYLLVKGCSLDAYTYTIMIHGFCSKGLFGEA 254
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +PDT ++ +I+ C +DEA+ +FE M Q+ + +Y+ LI LC+ G A
Sbjct: 90 GVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYA 149
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+L DE+ ++ G P +Y I LC++ KA L ++ + Q + +
Sbjct: 150 LELVDEMHDR-------GQPPNIITYNSILDVLCKNYDVDKAIVFLTKLKDQDIQPSMYT 202
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
Y +I G C+ G ++ ++ ++L + D Y +I GF K A L KM
Sbjct: 203 YNILIYGLCKVGRLKDARKVFEYLLVKGCSLDAYTYTIMIHGFCSKGLFGEAFTLLSKM 261
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 117/282 (41%), Gaps = 47/282 (16%)
Query: 42 VTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEH 101
V D YS++I +C+ + L+ E+ K I P +Y + C
Sbjct: 16 VQPDVVMYSVIIDGMCKDKLVNDVVDLYSEMVTKRI-------SPNIVTYNTLIHGFCIV 68
Query: 102 GKTRKAERVLR----QIMKRG--TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
G+ A +L+ IM R T D SY+ +I G C+ + L M + P
Sbjct: 69 GQLNDAFGLLQLFIFGIMARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFP 128
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVT 215
+V Y+ LI+G + + A+E +++M P T++SIL +L K + + A V
Sbjct: 129 NVVTYNSLINGLCRSGRISYALELVDEMHDRGQPPNIITYNSIL-DVLCKNYDVDKAIVF 187
Query: 216 VMML-DRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGK 274
+ L D++I+ + + T +I L++G LCK G+
Sbjct: 188 LTKLKDQDIQPS--MYTYNI-LIYG-----------------------------LCKVGR 215
Query: 275 LPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGL 316
L +ARK+ + L ++D +I G C EAF L
Sbjct: 216 LKDARKVFEYLLVKGCSLDAYTYTIMIHGFCSKGLFGEAFTL 257
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 112/285 (39%), Gaps = 39/285 (13%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
SPD TFN+LI+ C G L +A +F M + +++IL+ LC+ G +A+
Sbjct: 48 ISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAK 107
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
+ ++ K G P +Y I + C + K + V R I + G + SY
Sbjct: 108 SVIA-------MMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSY 160
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I G C+ L M R +P Y LIDG
Sbjct: 161 NIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDG------------------- 201
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN-----INLSTKSIELLFGH 240
L K++ S+L R + H +TV+ +D + N I L K +
Sbjct: 202 ---LCKSTMLGSLLMRCMLM-VNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKDQGIQS 257
Query: 241 GHRDKAFEIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLL 282
A ++ + L KG+ + I+ ++ LCK G EA LL
Sbjct: 258 DILKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALL 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 31/205 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +P+T ++N +I+ C ++EAL +F+ M + + +YS LI LC+
Sbjct: 152 GVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDGLCK------- 204
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-- 123
+ L + +++ PL Y LC+ KA ++++I +G Q +
Sbjct: 205 STMLGSLLMRCMLMVNHLIYPLTVLY---IDALCKSNHLDKAIALVKKIKDQGIQSDILK 261
Query: 124 -------------------SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI 164
+Y +I G C+EG ++ LL M +PD Y+ I
Sbjct: 262 NAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNI 321
Query: 165 DGFLQKDKPLLAMETLEKMLKSSYL 189
KD+ A + KM+ L
Sbjct: 322 RALFHKDENEKAEKLFRKMIARGLL 346
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 27/236 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT T NTLI C G++ +AL + + D SY LI +LC+ G+ A
Sbjct: 40 GYEPDTITLNTLIKGLCLKGDIHQALHFHDKLVAIGFMLDQFSYGTLINDLCKAGETKAA 99
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA-ERVLRQIMKRGTQDPLS 124
+L + K + QP Y I +C+ A + + + KR + D L+
Sbjct: 100 LELLRRVDGKLV-------QPDVVKYIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILT 152
Query: 125 YMTVIMGHCREGAYEN---------GYELL--------IW--MLRRDFLPDVEIYDCLID 165
Y +I C G N GY LL I+ M + P ++ Y+ LI+
Sbjct: 153 YNALISDFCIVGFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILIN 212
Query: 166 GFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDR 221
GF + K A+ E+M +P T++S++ L + G + ++ M DR
Sbjct: 213 GFCKIKKVDEAINLFEEMHCRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDR 268
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 37/286 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD N L + C G + + V + D+ + + LI+ LC +GD +A
Sbjct: 5 GIKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGDIHQA 64
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D+L +L +F SY + LC+ G+T+ A +LR++ + Q D +
Sbjct: 65 LHFHDKLVAIGFMLDQF-------SYGTLINDLCKAGETKAALELLRRVDGKLVQPDVVK 117
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y+ +I C++ + ++L M+ + PD+ Y+ LI F
Sbjct: 118 YIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILTYNALISDFCI--------------- 162
Query: 185 KSSYLPKTSTWHSIL-ARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+ P T++S++ L K + M ++ +N + +S +L +
Sbjct: 163 -VGFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMA-----QEGVNPAIQSYNILINGFCK 216
Query: 244 DKAFEIVELLYKKGFCVK-IEEVVQF------LCKRGKLPEARKLL 282
K + L+++ C K I +VV + LCK GK+ A KL+
Sbjct: 217 IKKVDEAINLFEEMHCRKLIPDVVTYNSLIDGLCKSGKISYALKLV 262
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF P+ T+N+L+ +C +++A +F M V SY+ILI C+ D+A
Sbjct: 164 GFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEA 223
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
LF+E+ ++++ P +Y + LC+ GK A +++ ++ RG Q P
Sbjct: 224 INLFEEMHCRKLI-------PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG-QPP 272
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 9/220 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G D +N L+ + C G++DEA+ +M + +V D+ +YSI IR+ C + A
Sbjct: 243 GCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSA 302
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ D++ ++ P +Y I + LC+ K +A ++L +++ G + D S
Sbjct: 303 FGVLDKMRRCNLL-------PNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWS 355
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y + HC +L+ M + PD Y+ ++ ++ + A E E M
Sbjct: 356 YNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMG 415
Query: 185 KSSYLPKTSTWHSILARLL-EKGFPHESARVTVMMLDRNI 223
+ P ST+ ++ L +KG E+ + MM+D I
Sbjct: 416 DKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGI 455
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 126/310 (40%), Gaps = 54/310 (17%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQR-------------- 59
F + ++ A D A++ F M F + +L+ LC++
Sbjct: 147 FWIIFTAYSRADLPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVK 206
Query: 60 --------------------GDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLC 99
GD KA +LFD + E+ G +Y + + LC
Sbjct: 207 SHFLLTTKTYSILINGWGKIGDSGKARELFDAMLEQ-------GCHVDLLAYNNLLEALC 259
Query: 100 EHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVE 158
+ G +A L ++ + + D +Y I +C + + +L M R + LP+V
Sbjct: 260 KGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVF 319
Query: 159 IYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
Y+C+I + K A + L++M+ S P T ++++I A + + + ++ M
Sbjct: 320 TYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRM 379
Query: 219 LDRNI----RQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQFLC- 270
++++ R N+ K LL G DKA E+ E + K F + ++ LC
Sbjct: 380 -EKDVCFPDRHTYNMVLK---LLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCK 435
Query: 271 KRGKLPEARK 280
K+GKL EA K
Sbjct: 436 KKGKLEEACK 445
>Medtr1g108270.1 | PPR containing plant-like protein | HC |
chr1:48926827-48924799 | 20130731
Length = 509
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 152/356 (42%), Gaps = 17/356 (4%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQ-RGDYDKAEKLFDE 71
TF+ + + A + EALK FE M+ + + + ++ LI LC+ + +KA++LFD+
Sbjct: 158 TFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDK 217
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIM 130
+ + + +P SY + + + K + V R++ G Q D ++Y +I
Sbjct: 218 MRQ-------WNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIIN 270
Query: 131 GHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLP 190
+C+ Y+ + ML ++ P IY I G + A E EK S + P
Sbjct: 271 AYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPP 330
Query: 191 KTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV 250
+ T++++++ ++ R+ M + I N + L G +A+ +
Sbjct: 331 EAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVF 390
Query: 251 ELLYKKGFC----VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNV--DIDLCNAVILGL 304
+ + + C +V+ C +L A +++++ + I + + +I+ L
Sbjct: 391 QRMSSETGCEPSVSTYAIMVRMFCNENQLDMA--MVVWNEMKDKGILPGIHMFSTLIISL 448
Query: 305 CEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLEN 360
C N++ +A ++++ G+ + AL A G +K++ L N
Sbjct: 449 CHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTVIHFAKKVDKLRN 504
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 9/240 (3%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D GF PD T+ +I+++C A DEA+ ++ +M + V Y I L G+
Sbjct: 255 DDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGL---GNGS 311
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL 123
+ ++ F E FEK G P A +Y + C + A R++ ++ + G
Sbjct: 312 RMDEAF-EFFEKSKAS---GFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNA 367
Query: 124 SYMTVIMGH-CREGAYENGYELLIWMLRRDFL-PDVEIYDCLIDGFLQKDKPLLAMETLE 181
+I+ H + G + Y + M P V Y ++ F +++ +AM
Sbjct: 368 RTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWN 427
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
+M LP + +++ L + ++ R MLD IR N+ + L G
Sbjct: 428 EMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAG 487
>Medtr5g077220.1 | PPR containing plant-like protein | HC |
chr5:32962861-32959451 | 20130731
Length = 981
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 30/368 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + DTCTFNTLI S GNL EA + + M+ +++++ +Y+I + G D A
Sbjct: 323 GVAMDTCTFNTLIFISGSHGNLLEAESLLDKMEERGISSNTRTYNIFLSLYATAGSIDAA 382
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+ + E G P +Y+ + LC + E V+ ++ K D LS
Sbjct: 383 LSYYRRIRE-------VGLFPDTVTYRALLGALCTENMVQAVEGVIDEMEKNSVSLDALS 435
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++ + EG + +L L++ P I +ID F +K A +
Sbjct: 436 LSGIVKMYINEGDVDKANDL----LQKYGEPPSFICAAIIDAFAEKGFWAEAENIFYRKR 491
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS----IELLFGH 240
+ + +++ + K ++ A V++ + Q I+ + + I++L G
Sbjct: 492 DKARQARDILEFNVMIKAYGKANHYDKA---VLLFEEMKYQGISPADSTYNSIIQMLSGA 548
Query: 241 GHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEA----RKLLLFSLKNHHNVD 293
D+A ++ + + GF C V+ + G+L +A ++++ +K + V
Sbjct: 549 DLVDQARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETV- 607
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
A+I G E R+ EA + + E GL L L L+ + G ++ I K
Sbjct: 608 ---YGALINGFAEHGRLDEALQYFHLMQESGLSANLVVLTTLMKSYSKAGDLKGVKSIYK 664
Query: 354 RIPGLENL 361
++ +E +
Sbjct: 665 QMQNMEGV 672
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 153/351 (43%), Gaps = 20/351 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDKAEK 67
P T+N++I G+ ++ +++ M D+ +YS LI + D A +
Sbjct: 193 PTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVR 252
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYM 126
LFDE+ E G QP A Y + + GK +A ++ ++ M+R +Y
Sbjct: 253 LFDEMKEN-------GLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYT 305
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I G + G E+ Y + ML+ PDV + + LI+ + D+ A+E E+M
Sbjct: 306 ELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLL 365
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL---FGHGHR 243
+ P T+++I+ L E P A L+R + + S+ + +L F +R
Sbjct: 366 NCTPNVVTYNTIIKSLFEDKAPPSEASS---WLERMKKDGVVPSSFTYSILIDGFCKTNR 422
Query: 244 -DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLP--EARKLLLFSLK-NHHNVDIDLCNA 299
+KA ++E + +KGF + GK EA L LK N + + +
Sbjct: 423 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAV 482
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAF 350
+I + R EA GL E+ + G ++ N L+T + R + + AF
Sbjct: 483 MIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGM-VRADMMDEAF 532
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK DG P + T++ LI C +++AL + E M A+Y LI +L +
Sbjct: 398 MKKDG-VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAK 456
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-T 119
Y+ A +LF EL E C GS + Y + ++ + G+ +A + ++ K G
Sbjct: 457 RYEAANELFQELKEN----C--GSSSVRV-YAVMIKHFGKCGRFNEAMGLFNEMKKLGCI 509
Query: 120 QDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D +Y +I G R + + L M PD+ ++ +++G + P AME
Sbjct: 510 PDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEM 569
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARV 214
KM S+ P +++++L L G E+ ++
Sbjct: 570 FAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKL 604
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 9/276 (3%)
Query: 8 SPDTCTFNTLIHS-HCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+P+ T+NT+I S EA E MK V S +YSILI C+ +KA
Sbjct: 368 TPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKAL 427
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKR-GTQDPLSY 125
L +E+ EK G P A+Y + L + + A + +++ + G+ Y
Sbjct: 428 LLLEEMDEK-------GFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVY 480
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
+I + G + L M + +PDV Y+ LI G ++ D A M +
Sbjct: 481 AVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEE 540
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+ P ++ + IL L G P + + M I+ + + L G ++
Sbjct: 541 NGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEE 600
Query: 246 AFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKL 281
A ++++ + KGF + L GK+ E R +
Sbjct: 601 ATKLMKEMNSKGFEYDLITYSSILEAVGKVDEDRNM 636
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 155/377 (41%), Gaps = 23/377 (6%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P + TL+ + G ++EAL + M+ + +Y+ LIR L + G +
Sbjct: 259 ENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVE 318
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDP 122
A ++ + K G +P + L + ++A + ++ + T +
Sbjct: 319 DAYGVYKNML-------KDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNV 371
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRD-FLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++Y T+I + A + + +++D +P Y LIDGF + ++ A+ LE
Sbjct: 372 VTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLE 431
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGH- 240
+M + + P + + S++ L K +E+A L N + S + ++ H
Sbjct: 432 EMDEKGFPPCPAAYCSLINS-LGKAKRYEAANELFQELKENCGSS---SVRVYAVMIKHF 487
Query: 241 ---GHRDKAFEIVELLYKKGFCV----KIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVD 293
G ++A + + K G C+ ++ + + + EA L +N N D
Sbjct: 488 GKCGRFNEAMGLFNEMKKLG-CIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPD 546
Query: 294 IDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
I+ N ++ GL A + ++ + + N ++ L G EEA + K
Sbjct: 547 INSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMK 606
Query: 354 RIPGLENLDRSVLSYSS 370
+ + + +++YSS
Sbjct: 607 EMNS-KGFEYDLITYSS 622
>Medtr5g048070.1 | PPR containing plant-like protein | HC |
chr5:21053107-21055317 | 20130731
Length = 504
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 172/400 (43%), Gaps = 64/400 (16%)
Query: 11 TCTFNTLIHSHCSAGNLDEALKVF-ENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T +FNTL+ + L++A +F E+ ++V + + ++L+ LC++ D A ++F
Sbjct: 117 TQSFNTLLEIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIF 176
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVL-----RQIMKRGTQDPLS 124
E+ + G P SY + + LC+ + +A +L R +K +D +
Sbjct: 177 QEMDYQ-------GCYPNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVI 229
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLI-----DGFLQKDKPLLAMET 179
Y T++ C G ++ E+L +LR+ Y+ L DG KD +
Sbjct: 230 YRTLLDALCDNGKFDEAVEILGKILRKGLKAPKRCYNRLDISQCGDG---KDAEVTKRWI 286
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
E +++ S +P T+++ S+ L E+G E+ +V + M DR + ++ + L
Sbjct: 287 HEALVRGS-VPSTASYTSMAVDLYEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCK 345
Query: 240 HGHRDKAFEIVE------------------------------------LLYKKGFCVKIE 263
G D+A +++E + KK C+ +
Sbjct: 346 VGKVDEAIKVIEEDMVEVNCLPNATVYTILLKNLGGVGNSTSVLESLNKMSKKVNCMADK 405
Query: 264 E----VVQFLCKRGKLPEARKLL-LFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCY 318
E +++ LC+ K EA +LL S+K++ + N +I GLC + R EA
Sbjct: 406 ETYCILLEMLCRERKYLEASQLLEQMSIKSYWPC-ANTYNLLIEGLCSLGRQYEAVMWLE 464
Query: 319 ELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGL 358
+++ +G E++ N L ++ G ++ + RI L
Sbjct: 465 DMISQGKLPEISVWNSLASSFCNSGMMKVSTETFDRIRSL 504
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 12/218 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P T ++ ++ G +DEA KV MK+ + + + + LC+ G D+A
Sbjct: 293 GSVPSTASYTSMAVDLYEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCKVGKVDEA 352
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT--QDPL 123
K+ +E + + P A Y + + L G + L ++ K+ D
Sbjct: 353 IKVIEE------DMVEVNCLPNATVYTILLKNLGGVGNSTSVLESLNKMSKKVNCMADKE 406
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++ CRE Y +LL M + + P Y+ LI+G + A+ LE M
Sbjct: 407 TYCILLEMLCRERKYLEASQLLEQMSIKSYWPCANTYNLLIEGLCSLGRQYEAVMWLEDM 466
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDR 221
+ LP+ S W+S+ + G +V+ DR
Sbjct: 467 ISQGKLPEISVWNSLASSFCNSGM----MKVSTETFDR 500
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVF-ENMKNFQVTADSASYSILIRNLCQRGDY 62
D F P F + + C G +DEA+KV E+M ++ Y+IL++NL G+
Sbjct: 326 DRRFKPKHSIFEAKVAALCKVGKVDEAIKVIEEDMVEVNCLPNATVYTILLKNLGGVGNS 385
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQD 121
+ +++ +K V C + +Y + + LC K +A ++L Q+ +K
Sbjct: 386 TSVLESLNKMSKK--VNCMADKE----TYCILLEMLCRERKYLEASQLLEQMSIKSYWPC 439
Query: 122 PLSYMTVIMGHCREGAYENGYELLIW---MLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+Y +I G C G YE ++W M+ + LP++ +++ L F ++ E
Sbjct: 440 ANTYNLLIEGLCSLG---RQYEAVMWLEDMISQGKLPEISVWNSLASSFCNSGMMKVSTE 496
Query: 179 TLEKM 183
T +++
Sbjct: 497 TFDRI 501
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 8/194 (4%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D T+N LI + L++A+ +F M + D +++IL+ C+ G +A+ +
Sbjct: 33 DVFTYNALISGFSAVSKLNDAIGLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVL 92
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTV 128
+ + +I +P +Y + C + KA+ + + RG + SY T+
Sbjct: 93 AMMIKDDI-------KPRVVTYSSLMDGYCLINEVNKAKEIFDSMAARGVMANVQSYTTM 145
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I G C+ + L M R + +V IY LIDG + + A++ +++M
Sbjct: 146 INGFCKIKMVDEAINLFEEMRCRKIIRNVLIYSFLIDGLCKSGRISYALKLVDEMHDRGQ 205
Query: 189 LPKTSTWHSILARL 202
P + SIL L
Sbjct: 206 PPNIVIYSSILDAL 219
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+PD TFN L+ C G + EA V M + +YS L+ C + +KA+
Sbjct: 65 INPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGYCLINEVNKAK 124
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSY 125
++FD + + G SY + C+ +A + ++ ++ ++ L Y
Sbjct: 125 EIFDSMAAR-------GVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNVLIY 177
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
+I G C+ G +L+ M R P++ IY ++D
Sbjct: 178 SFLIDGLCKSGRISYALKLVDEMHDRGQPPNIVIYSSILDAL 219
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 102/237 (43%), Gaps = 8/237 (3%)
Query: 14 FNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELF 73
+ T+I S C +++A ++ M ++ D +Y+ LI + A LF+++
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEMVAKRIGLDVFTYNALISGFSAVSKLNDAIGLFNKMT 61
Query: 74 EKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTVIMGH 132
+ I P ++ + C+ G+ ++A+ VL ++K + ++Y +++ G+
Sbjct: 62 AENI-------NPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGY 114
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
C E+ M R + +V+ Y +I+GF + A+ E+M +
Sbjct: 115 CLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNV 174
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEI 249
+ ++ L + G + ++ M DR NI + + ++ L + D+A +
Sbjct: 175 LIYSFLIDGLCKSGRISYALKLVDEMHDRGQPPNIVIYSSILDALCKNHRVDQAIAL 231
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 100/237 (42%), Gaps = 11/237 (4%)
Query: 49 YSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE 108
Y+ +I +LC+ + A L+ E+ K I L F L + + + K A
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEMVAKRIGLDVFTYNALISGFSAV-------SKLNDAI 54
Query: 109 RVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
+ ++ D ++ ++ G C++G + +L M++ D P V Y L+DG+
Sbjct: 55 GLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGY 114
Query: 168 LQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI 227
++ A E + M + ++ +++ + E+ + M R I +N+
Sbjct: 115 CLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNV 174
Query: 228 NLSTKSIELLFGHGHRDKAFEIVELLYKKG---FCVKIEEVVQFLCKRGKLPEARKL 281
+ + I+ L G A ++V+ ++ +G V ++ LCK ++ +A L
Sbjct: 175 LIYSFLIDGLCKSGRISYALKLVDEMHDRGQPPNIVIYSSILDALCKNHRVDQAIAL 231
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + ++ T+I+ C +DEA+ +FE M+ ++ + YS LI LC+ G A
Sbjct: 134 GVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNVLIYSFLIDGLCKSGRISYA 193
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
KL DE+ ++ G P Y I LC++ + +A
Sbjct: 194 LKLVDEMHDR-------GQPPNIVIYSSILDALCKNHRVDQA 228
>Medtr4g021220.1 | PPR containing plant-like protein | HC |
chr4:6857254-6858736 | 20130731
Length = 449
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 146/313 (46%), Gaps = 22/313 (7%)
Query: 24 AGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFG 83
A N+D L V M++F++ D+ Y+++I+ +C++GD + EKL ++ G
Sbjct: 118 AENVDLGLWVLRKMEDFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMKDMSLN-------G 170
Query: 84 SQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGY 142
P +Y + + LC G+ +A +++ + G + + + V+ G CR + E
Sbjct: 171 ICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERAL 230
Query: 143 ELLIWMLRR-DFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILAR 201
ELL M + D P+V Y LI F ++ + A+ L++M T +++
Sbjct: 231 ELLDEMEKSGDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIES 290
Query: 202 LLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVK 261
L +G E+ +V +D+ + ++ L R K E E L+K+ +
Sbjct: 291 LCTEGRVDEAYKV----VDKLVVEHCVSRGDCYNSLVISFIRVKKLEGAENLFKEMLAAE 346
Query: 262 IEE-------VVQFLCKRGKLPEARKLL--LFSLKNHHNVDIDLCNAVILGLCEINRVLE 312
I+ +++ LC + ++ + LL + ++ ++D D+ + +++GL + N + E
Sbjct: 347 IKPDTLASSLLLKELCLKDRVLDGFYLLDTIENMGFLSSIDSDIYSIMLIGLWQKNHLTE 406
Query: 313 AFGLCYELVEKGL 325
A L +++K +
Sbjct: 407 ATKLAKIMLKKAI 419
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 9/256 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+ T+I CSAG L+EA ++ + M+ + +S S ++ LC+ ++A
Sbjct: 170 GICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERA 229
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLS 124
+L DE+ EK C P +Y + Q C+ G+ +A +L ++ G + ++
Sbjct: 230 LELLDEM-EKSGDCC-----PNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVT 283
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
T+I C EG + Y+++ ++ + + Y+ L+ F++ K A ++ML
Sbjct: 284 VFTLIESLCTEGRVDEAYKVVDKLVVEHCVSRGDCYNSLVISFIRVKKLEGAENLFKEML 343
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIEL--LFGHGH 242
+ P T +L L K + + + + +I+ SI L L+ H
Sbjct: 344 AAEIKPDTLASSLLLKELCLKDRVLDGFYLLDTIENMGFLSSIDSDIYSIMLIGLWQKNH 403
Query: 243 RDKAFEIVELLYKKGF 258
+A ++ +++ KK
Sbjct: 404 LTEATKLAKIMLKKAI 419
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
M+ G P+ T+ +LI S C G EAL + + M+ F A+ + LI +LC G
Sbjct: 236 MEKSGDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIESLCTEG 295
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+A K+ D+L + V Y + K AE + ++++ +
Sbjct: 296 RVDEAYKVVDKLVVEHCV-------SRGDCYNSLVISFIRVKKLEGAENLFKEMLAAEIK 348
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLP--DVEIYDCLIDGFLQKDKPLLAM 177
D L+ ++ C + +G+ LL + FL D +IY ++ G QK+ A
Sbjct: 349 PDTLASSLLLKELCLKDRVLDGFYLLDTIENMGFLSSIDSDIYSIMLIGLWQKNHLTEAT 408
Query: 178 ETLEKMLKSS 187
+ + MLK +
Sbjct: 409 KLAKIMLKKA 418
>Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3110709-3109039 | 20130731
Length = 508
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 133/351 (37%), Gaps = 37/351 (10%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
+ I C+ LD+A VF +MK++ + D YS L R C+ G + LF E+
Sbjct: 182 AYAAAIRGFCNEMKLDKAEDVFYDMKSWGLVPDFHVYSPLTRGYCETGKDSEVVDLFKEI 241
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMG 131
+ C F +Y + LC+ GK A L ++ D Y T+I G
Sbjct: 242 KQS----CLFLD---GVAYNIVLDSLCKLGKVDDAVSTLEELTSMNIDLDIKHYTTLING 294
Query: 132 HCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPK 191
+C +G L M + F PDV Y+ L G +KD ++ L M P
Sbjct: 295 YCLQGKTVEAQCLFKEMEEKGFKPDVVAYNVLAAGLFRKDLDSEVIDLLIYMDSQGVKPN 354
Query: 192 TSTWHSILARLLEKG-----------FPHESARVTVMMLDRNIRQNINLSTKSIELLFGH 240
++T I+ G +ES + M+ N NL KS +L
Sbjct: 355 STTHKIIIEGYCSVGKVGEAEAYFNRMKNESVELYTAMV--NGYCEANLIEKSYDLFLSC 412
Query: 241 GHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAV 300
+D + V +L + + AR L F + + + +
Sbjct: 413 QTKDIFQQKVLVLRNLAW---------------NMERARSLFDFFIGRGFTLGVVTYTVM 457
Query: 301 ILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFI 351
I G C +N + EA+ L ++ +G+ + L+ E + + E AF+
Sbjct: 458 IKGYCRMNCLQEAYDLFQDMKRRGIQPNVVTYTVLL-PWEIKTSIFENAFL 507
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 146/362 (40%), Gaps = 55/362 (15%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK-AEK 67
P N LI+ + AL+V++ +K + + +Y+I+I+ LC+ D K E
Sbjct: 72 PSIVACNFLINRLIQHDKVKMALEVYKEIKRVGLCPNHHTYAIVIKGLCKNSDDLKHVEY 131
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL---S 124
+FDE+ E G P + Y + LC++ + ++L + R + P+ +
Sbjct: 132 VFDEMEEA-------GVTPNSYCYAAYIEGLCKNNMSDVGYKLLERC--RASNAPIEVYA 182
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y I G C E + ++ M +PD +Y L G+ + K ++ +++
Sbjct: 183 YAAAIRGFCNEMKLDKAEDVFYDMKSWGLVPDFHVYSPLTRGYCETGKDSEVVDLFKEIK 242
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESA----RVTVMMLDRNIRQN---IN---LSTKSI 234
+S ++ +L L + G ++ +T M +D +I+ IN L K++
Sbjct: 243 QSCLFLDGVAYNIVLDSLCKLGKVDDAVSTLEELTSMNIDLDIKHYTTLINGYCLQGKTV 302
Query: 235 E----------------------LLFGHGHRDKAFEIVELL-YKKGFCVKIEE-----VV 266
E L G +D E+++LL Y VK ++
Sbjct: 303 EAQCLFKEMEEKGFKPDVVAYNVLAAGLFRKDLDSEVIDLLIYMDSQGVKPNSTTHKIII 362
Query: 267 QFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLH 326
+ C GK+ EA N ++L A++ G CE N + +++ L K +
Sbjct: 363 EGYCSVGKVGEAEAY----FNRMKNESVELYTAMVNGYCEANLIEKSYDLFLSCQTKDIF 418
Query: 327 QE 328
Q+
Sbjct: 419 QQ 420
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 19/263 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD ++ L +C G E + +F+ +K + D +Y+I++ +LC+ G D A
Sbjct: 210 GLVPDFHVYSPLTRGYCETGKDSEVVDLFKEIKQSCLFLDGVAYNIVLDSLCKLGKVDDA 269
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
+EL I L Y + C GKT +A+ + +++ ++G + D ++
Sbjct: 270 VSTLEELTSMNIDL-------DIKHYTTLINGYCLQGKTVEAQCLFKEMEEKGFKPDVVA 322
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y + G R+ +LLI+M + P+ + +I+G+ K A +M
Sbjct: 323 YNVLAAGLFRKDLDSEVIDLLIYMDSQGVKPNSTTHKIIIEGYCSVGKVGEAEAYFNRMK 382
Query: 185 KSSYLPKTSTWHSIL-ARLLEKGF-------PHESARVTVMMLDRNIRQNINLSTKSIEL 236
S T+ + A L+EK + + + V++L RN+ N+ + +
Sbjct: 383 NESVELYTAMVNGYCEANLIEKSYDLFLSCQTKDIFQQKVLVL-RNLAWNMERARSLFDF 441
Query: 237 LFGHGHRDKAFEIVELLYKKGFC 259
G G ++ KG+C
Sbjct: 442 FIGRGFTLGVVTYTVMI--KGYC 462
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 136/343 (39%), Gaps = 17/343 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P T +N L+ + G+L +A V M+ V D +YS+L+ G ++
Sbjct: 309 ENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWE 368
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A + E+ + F + ASY+ + G+ +K+ +VL+++ G Q D
Sbjct: 369 SARIVLKEMEASNLQPNSFIYSRILASYR-------DKGEWQKSFQVLKEMKMSGVQPDR 421
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y +I + ++ ML PD ++ LID + + A E E+
Sbjct: 422 HFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEE 481
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM---MLDRNIRQNINLSTKSIELLFG 239
M +S Y P T++ ++ + G RV + M + + N T +++
Sbjct: 482 MQQSGYSPCVMTYNIMINSM---GAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGK 538
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G + A E +E+L GF ++ +RG +A +
Sbjct: 539 SGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLA 598
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
N++I E R EAF + + E G+ ++ L+ AL
Sbjct: 599 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 641
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 141/349 (40%), Gaps = 13/349 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEAL--KVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
GF PD ++++I S + +D + K++ +++ ++ AD + +I + GD
Sbjct: 204 GFQPDFINYSSIIKSLTRSNRIDSPILQKLYAEIESDKIEADGHLLNDIILGFSKAGDAT 263
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-P 122
+A V G P + + + L G+T +AE + +I + G +
Sbjct: 264 RAMHFL-------AVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRT 316
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y ++ G+ + G+ ++ ++ M + LPD Y L+D + + A L++
Sbjct: 317 RAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKE 376
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M S+ P + + ILA +KG +S +V M ++ + + I+ +
Sbjct: 377 MEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNC 436
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
D A E + +G V ++ CK G+ A +L ++ ++ + N
Sbjct: 437 LDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNI 496
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I + R L ++ +GL LV G+ +A
Sbjct: 497 MINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDA 545
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT T+NTLI HC +G A ++FE M+ + +Y+I+I ++ G ++
Sbjct: 451 GIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSM---GAQERW 507
Query: 66 EKLFDELFEKEIVLCKFGSQ---PLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
E++ D +L K SQ P A +Y + + G+ A L +++K P
Sbjct: 508 ERVND-------LLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECL-EVLKSMGFKP 559
Query: 123 LS--YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
S Y +I + + G + M P + + LI+ F + + A L
Sbjct: 560 TSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVL 619
Query: 181 EKMLKSSYLPKTSTWHSILARLL 203
+ M ++ P T+ +++ L+
Sbjct: 620 QYMKENGVKPDVVTYTTLMKALI 642
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 136/343 (39%), Gaps = 17/343 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P T +N L+ + G+L +A V M+ V D +YS+L+ G ++
Sbjct: 309 ENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWE 368
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A + E+ + F + ASY+ + G+ +K+ +VL+++ G Q D
Sbjct: 369 SARIVLKEMEASNLQPNSFIYSRILASYR-------DKGEWQKSFQVLKEMKMSGVQPDR 421
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
Y +I + ++ ML PD ++ LID + + A E E+
Sbjct: 422 HFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEE 481
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM---MLDRNIRQNINLSTKSIELLFG 239
M +S Y P T++ ++ + G RV + M + + N T +++
Sbjct: 482 MQQSGYSPCVMTYNIMINSM---GAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGK 538
Query: 240 HGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDL 296
G + A E +E+L GF ++ +RG +A +
Sbjct: 539 SGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLA 598
Query: 297 CNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
N++I E R EAF + + E G+ ++ L+ AL
Sbjct: 599 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 641
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 141/349 (40%), Gaps = 13/349 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEAL--KVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
GF PD ++++I S + +D + K++ +++ ++ AD + +I + GD
Sbjct: 204 GFQPDFINYSSIIKSLTRSNRIDSPILQKLYAEIESDKIEADGHLLNDIILGFSKAGDAT 263
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-P 122
+A V G P + + + L G+T +AE + +I + G +
Sbjct: 264 RAMHFL-------AVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRT 316
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y ++ G+ + G+ ++ ++ M + LPD Y L+D + + A L++
Sbjct: 317 RAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKE 376
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M S+ P + + ILA +KG +S +V M ++ + + I+ +
Sbjct: 377 MEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNC 436
Query: 243 RDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNA 299
D A E + +G V ++ CK G+ A +L ++ ++ + N
Sbjct: 437 LDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNI 496
Query: 300 VILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
+I + R L ++ +GL LV G+ +A
Sbjct: 497 MINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDA 545
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT T+NTLI HC +G A ++FE M+ + +Y+I+I ++ G ++
Sbjct: 451 GIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSM---GAQERW 507
Query: 66 EKLFDELFEKEIVLCKFGSQ---PLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
E++ D +L K SQ P A +Y + + G+ A L +++K P
Sbjct: 508 ERVND-------LLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECL-EVLKSMGFKP 559
Query: 123 LS--YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETL 180
S Y +I + + G + M P + + LI+ F + + A L
Sbjct: 560 TSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVL 619
Query: 181 EKMLKSSYLPKTSTWHSILARLL 203
+ M ++ P T+ +++ L+
Sbjct: 620 QYMKENGVKPDVVTYTTLMKALI 642
>Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold1840:257-1262 | 20130731
Length = 335
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P+T T TL+ C + EAL +++ + SY LI LC+ G+ A
Sbjct: 110 GYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAA 169
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
++ ++ E ++V + Y I LC+ A + + I KR + ++
Sbjct: 170 LQMLRQI-EGKLV------RTNVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 222
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++I G+C G ++ + LL M+ ++ PDV ++ L+D ++ K A + M+
Sbjct: 223 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 282
Query: 185 KSSYLPKTSTWHSIL 199
K +P T+ S++
Sbjct: 283 KEGVMPDVVTYSSLM 297
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ + + LI+ +C G + A +F + ++ + + L++ C +A
Sbjct: 75 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 134
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
D + G SY + LC+ G+TR A ++LRQI + + + +
Sbjct: 135 LHFHDHVLA-------LGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVRTNVVM 187
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y T+I G C++ + YEL M+ + P V + LI G+ + A L +M+
Sbjct: 188 YSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 247
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHES-ARVTVMM 218
+ P T++ ++ L ++G E+ + + VMM
Sbjct: 248 LKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF + ++ TLI+ C G AL++ ++ V + YS +I LC+ + A
Sbjct: 145 GFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVRTNVVMYSTIIDGLCKDKLVNDA 204
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ-IMKRGTQDPLS 124
+L+ E+ K I P + + C G+ ++A +LR+ ++K D +
Sbjct: 205 YELYSEMITKRI-------SPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYT 257
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
+ ++ C+EG + + M++ +PDV Y L+DG+
Sbjct: 258 FNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGY 300
>Medtr0026s0200.1 | PPR containing plant-like protein | HC |
scaffold0026:95081-98739 | 20130731
Length = 778
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 34/197 (17%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +++ LI + C G +++ K++E M+ ++ AD SY+ +I C+ GD +A
Sbjct: 274 GCDPNAYSYSLLIAAFCDGGRMEDCEKMWEKMRKKEIEADVVSYNTIIGGFCKIGDVGRA 333
Query: 66 EKLFDE------------------------------LFEKEIVLCKFGSQPLAASYKPIF 95
E+ + E L K+++ F +P A++ +
Sbjct: 334 EEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDF--RPDASTLDMVV 391
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQDPL--SYMTVIMGHCREGAYENGYELLIWMLRRDF 153
+ LC G+ +A + LR + + P SY +I G C EG + +L M+ + F
Sbjct: 392 RLLCNKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMIGKGF 451
Query: 154 LPDVEIYDCLIDGFLQK 170
+ EIY+ IDG L +
Sbjct: 452 QLNSEIYEVFIDGQLMR 468
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 9/220 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +FNTL+ +G +++ +++ M ++ SYS+LI C G + EK+
Sbjct: 242 PNVHSFNTLMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMT 127
++++ +KEI + SY I C+ G +AE R++ G +S Y
Sbjct: 302 WEKMRKKEI-------EADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEH 354
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML-KS 186
++ G+C E+ + MLR+DF PD D ++ K + AM+ L + K
Sbjct: 355 LVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCNKGRVEEAMKFLRSGVGKF 414
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+PK ++ +++ +G E+ ++ M+ + + N
Sbjct: 415 DLVPKEKSYEALIKGFCFEGRMDEALKLQAEMIGKGFQLN 454
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFE-----------------NMKNFQVTADSA- 47
G SP T N LI C +D +++ + F+V +
Sbjct: 186 GISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKDEISKRGYGFRGFRVVKPNVH 245
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
S++ L+ Q G +K E++++E+ E G P A SY + C+ G+
Sbjct: 246 SFNTLMLCCYQSGLVEKVEEIWNEMSE-------MGCDPNAYSYSLLIAAFCDGGRMEDC 298
Query: 108 ERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
E++ ++ K+ + D +SY T+I G C+ G E M V Y+ L+ G
Sbjct: 299 EKMWEKMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKG 358
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
+ + A+ + ML+ + P ST ++ L KG E+ +
Sbjct: 359 YCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCNKGRVEEAMK 405
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 143/368 (38%), Gaps = 40/368 (10%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T N ++ + S +AL FE +K + D+ +++I+I L + YD
Sbjct: 248 DNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYD 307
Query: 64 KAEKLFDELFEKEI------------------------------VLCKFGSQPLAASYKP 93
KA +F+ + EK+ ++ G +P SY
Sbjct: 308 KAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNA 367
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRD 152
+ G +A +V +I + G + D +SY +++ + R + E+ + R +
Sbjct: 368 LLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNN 427
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
P++ Y+ LID + A+E L +M + P + ++LA G +
Sbjct: 428 LKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKID 487
Query: 213 RVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFL 269
V R I+ N +I G DKA ++ + KK V ++
Sbjct: 488 TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGC 547
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
CK K EA + + + ++ +++I + +++EA L + L
Sbjct: 548 CKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTF------NLMKSL 601
Query: 330 TCLNDLVT 337
C D+VT
Sbjct: 602 GCSPDVVT 609
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 154/385 (40%), Gaps = 48/385 (12%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
P T+N LI++ S+GN EAL V + M + V D +++I++ Y K
Sbjct: 214 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSK 273
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ---D 121
A F+ + I +P ++ I L + + KA + + ++ ++ D
Sbjct: 274 ALSYFELIKGTHI-------RPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPD 326
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+++ ++I + G EN ML P++ Y+ L+ + + A++
Sbjct: 327 VVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFN 386
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
++ ++ + P ++ S+L P ++ + M+ N++ NI I+ +G
Sbjct: 387 EIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNG 446
Query: 242 HRDKAFEIVE----------------LLYKKGFC---VKIEEVVQFLCKRG-KLPE-ARK 280
+ A EI+ LL G C VKI+ V+ RG KL A
Sbjct: 447 LLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYN 506
Query: 281 LLLFSLKNHHNVD--IDLCNAV---------------ILGLCEINRVLEAFGLCYELVEK 323
+ S N D IDL N++ I G C++++ EA E++
Sbjct: 507 SAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHL 566
Query: 324 GLHQELTCLNDLVTALEARGKVEEA 348
L + ++ A +G++ EA
Sbjct: 567 KLPMSKEVYSSIICAYSKQGQIIEA 591
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T +N+ I S+ + G D+A+ ++ +M+ ++ +DS +Y++LI C+ + +A
Sbjct: 497 GIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 556
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+E+ ++ + K Y I + G+ +AE + G + D ++
Sbjct: 557 LSFMEEMMHLKLPMSK-------EVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVVT 609
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ + +E Y L M D D L+ F + +P + +L + +
Sbjct: 610 YTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVL-SLAQSM 668
Query: 185 KSSYLPKTST 194
+ +P + T
Sbjct: 669 REKDIPLSDT 678
>Medtr7g091410.4 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 585
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 143/368 (38%), Gaps = 40/368 (10%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T N ++ + S +AL FE +K + D+ +++I+I L + YD
Sbjct: 3 DNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYD 62
Query: 64 KAEKLFDELFEKEI------------------------------VLCKFGSQPLAASYKP 93
KA +F+ + EK+ ++ G +P SY
Sbjct: 63 KAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNA 122
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRD 152
+ G +A +V +I + G + D +SY +++ + R + E+ + R +
Sbjct: 123 LLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNN 182
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
P++ Y+ LID + A+E L +M + P + ++LA G +
Sbjct: 183 LKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKID 242
Query: 213 RVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFL 269
V R I+ N +I G DKA ++ + KK V ++
Sbjct: 243 TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGC 302
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
CK K EA + + + ++ +++I + +++EA L + L
Sbjct: 303 CKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTF------NLMKSL 356
Query: 330 TCLNDLVT 337
C D+VT
Sbjct: 357 GCSPDVVT 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T +N+ I S+ + G D+A+ ++ +M+ ++ +DS +Y++LI C+ + +A
Sbjct: 252 GIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 311
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+E+ ++ + K Y I + G+ +AE + G + D ++
Sbjct: 312 LSFMEEMMHLKLPMSK-------EVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVVT 364
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKP 173
Y ++ + +E Y L M D D L+ F + +P
Sbjct: 365 YTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQP 413
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 143/368 (38%), Gaps = 40/368 (10%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T N ++ + S +AL FE +K + D+ +++I+I L + YD
Sbjct: 109 DNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYD 168
Query: 64 KAEKLFDELFEKEI------------------------------VLCKFGSQPLAASYKP 93
KA +F+ + EK+ ++ G +P SY
Sbjct: 169 KAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNA 228
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRD 152
+ G +A +V +I + G + D +SY +++ + R + E+ + R +
Sbjct: 229 LLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNN 288
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
P++ Y+ LID + A+E L +M + P + ++LA G +
Sbjct: 289 LKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKID 348
Query: 213 RVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFL 269
V R I+ N +I G DKA ++ + KK V ++
Sbjct: 349 TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGC 408
Query: 270 CKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQEL 329
CK K EA + + + ++ +++I + +++EA L + L
Sbjct: 409 CKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTF------NLMKSL 462
Query: 330 TCLNDLVT 337
C D+VT
Sbjct: 463 GCSPDVVT 470
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 154/385 (40%), Gaps = 48/385 (12%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
P T+N LI++ S+GN EAL V + M + V D +++I++ Y K
Sbjct: 75 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSK 134
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ---D 121
A F+ + I +P ++ I L + + KA + + ++ ++ D
Sbjct: 135 ALSYFELIKGTHI-------RPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPD 187
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+++ ++I + G EN ML P++ Y+ L+ + + A++
Sbjct: 188 VVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFN 247
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
++ ++ + P ++ S+L P ++ + M+ N++ NI I+ +G
Sbjct: 248 EIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNG 307
Query: 242 HRDKAFEIVE----------------LLYKKGFC---VKIEEVVQFLCKRG-KLPE-ARK 280
+ A EI+ LL G C VKI+ V+ RG KL A
Sbjct: 308 LLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYN 367
Query: 281 LLLFSLKNHHNVD--IDLCNAV---------------ILGLCEINRVLEAFGLCYELVEK 323
+ S N D IDL N++ I G C++++ EA E++
Sbjct: 368 SAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHL 427
Query: 324 GLHQELTCLNDLVTALEARGKVEEA 348
L + ++ A +G++ EA
Sbjct: 428 KLPMSKEVYSSIICAYSKQGQIIEA 452
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T +N+ I S+ + G D+A+ ++ +M+ ++ +DS +Y++LI C+ + +A
Sbjct: 358 GIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 417
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+E+ ++ + K Y I + G+ +AE + G + D ++
Sbjct: 418 LSFMEEMMHLKLPMSK-------EVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVVT 470
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y ++ + +E Y L M D D L+ F + +P + +L + +
Sbjct: 471 YTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVL-SLAQSM 529
Query: 185 KSSYLPKTST 194
+ +P + T
Sbjct: 530 REKDIPLSDT 539
>Medtr1g056160.1 | PPR containing plant protein | HC |
chr1:24577487-24578941 | 20130731
Length = 484
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 148/324 (45%), Gaps = 19/324 (5%)
Query: 13 TFNTL---IHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T NT+ + A +A+++F++++ + ++ S ++L+ LC+ ++A +++
Sbjct: 136 TLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIY 195
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTV 128
EL K P A ++ + C + +A ++++ G + +SY T+
Sbjct: 196 LEL--------KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTI 247
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I +C+E ++ Y+LL M ++ P+V Y ++ + +K A++ +E+M
Sbjct: 248 IQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGC 307
Query: 189 LPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T ++S++ L G ++ V V M ++ N + I + + ++AF
Sbjct: 308 RPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAF 367
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRG-KLPEARKLL---LFSLKNHHNVDIDLCNAVIL- 302
I++ + K G C + L K K+ E L L + N +++ +DL +L
Sbjct: 368 GILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLI 427
Query: 303 -GLCEINRVLEAFGLCYELVEKGL 325
GL +R AF L E+ ++ +
Sbjct: 428 HGLYRADRCKWAFDLFEEMADQDI 451
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 10/196 (5%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+P+ TFN LIH C+ ++EA + MK + SYS +I+ CQ ++D+
Sbjct: 202 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 261
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSY 125
L DE+ + P +Y I L + K +A +V+ ++ G + D L +
Sbjct: 262 DLLDEMQAQ-------NCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFF 314
Query: 126 MTVIMGHCREGAYENGYELL-IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
++I R G ++ + + M + P+ Y+ +I F + A L++M
Sbjct: 315 NSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEME 374
Query: 185 KSSYL-PKTSTWHSIL 199
KS P T+H ++
Sbjct: 375 KSGLCKPDIQTYHPLI 390
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 10/215 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+ T++ + A +EAL+V E M D+ ++ LI L + G D A
Sbjct: 273 SPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATH 332
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-LSYM 126
+F ++ + K P ++Y + C + + +A +L+++ K G P +
Sbjct: 333 VF------KVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTY 386
Query: 127 TVIMGHCREGAYENGY--ELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKM 183
++ C + + + ++L M+ + + D+ Y LI G + D+ A + E+M
Sbjct: 387 HPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEM 446
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
+P+ T +L + +K ++ V+M
Sbjct: 447 ADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIEVLM 481
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 121/313 (38%), Gaps = 34/313 (10%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T N ++ + S +AL FE +K + D+ +++I+I L + YD
Sbjct: 44 DNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYD 103
Query: 64 KAEKLFDELFEKEI------------------------------VLCKFGSQPLAASYKP 93
KA +F+ + EK+ ++ G +P SY
Sbjct: 104 KAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNA 163
Query: 94 IFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRD 152
+ G +A +V +I + G + D +SY +++ + R + E+ + R +
Sbjct: 164 LLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNN 223
Query: 153 FLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESA 212
P++ Y+ LID + A+E L +M + P + ++LA G +
Sbjct: 224 LKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKID 283
Query: 213 RVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGF---CVKIEEVVQFL 269
V R I+ N +I G DKA ++ + KK V ++
Sbjct: 284 TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGC 343
Query: 270 CKRGKLPEARKLL 282
CK K EA +
Sbjct: 344 CKMSKFGEALSFM 356
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 154/385 (40%), Gaps = 48/385 (12%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
P T+N LI++ S+GN EAL V + M + V D +++I++ Y K
Sbjct: 10 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSK 69
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ---D 121
A F+ + I +P ++ I L + + KA + + ++ ++ D
Sbjct: 70 ALSYFELIKGTHI-------RPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPD 122
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+++ ++I + G EN ML P++ Y+ L+ + + A++
Sbjct: 123 VVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFN 182
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
++ ++ + P ++ S+L P ++ + M+ N++ NI I+ +G
Sbjct: 183 EIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNG 242
Query: 242 HRDKAFEIVE----------------LLYKKGFC---VKIEEVVQFLCKRG-KLPE-ARK 280
+ A EI+ LL G C VKI+ V+ RG KL A
Sbjct: 243 LLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYN 302
Query: 281 LLLFSLKNHHNVD--IDLCNAV---------------ILGLCEINRVLEAFGLCYELVEK 323
+ S N D IDL N++ I G C++++ EA E++
Sbjct: 303 SAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHL 362
Query: 324 GLHQELTCLNDLVTALEARGKVEEA 348
L + ++ A +G++ EA
Sbjct: 363 KLPMSKEVYSSIICAYSKQGQIIEA 387
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G +T +N+ I S+ + G D+A+ ++ +M+ ++ +DS +Y++LI C+ + +A
Sbjct: 293 GIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 352
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+E+ ++ + K Y I + G+ +AE + G + D ++
Sbjct: 353 LSFMEEMMHLKLPMSK-------EVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVVT 405
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKP 173
Y ++ + +E Y L M D D L+ F + +P
Sbjct: 406 YTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQP 454
>Medtr1g056160.3 | PPR containing plant protein | HC |
chr1:24576326-24582031 | 20130731
Length = 501
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 148/324 (45%), Gaps = 19/324 (5%)
Query: 13 TFNTL---IHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T NT+ + A +A+++F++++ + ++ S ++L+ LC+ ++A +++
Sbjct: 153 TLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIY 212
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTV 128
EL K P A ++ + C + +A ++++ G + +SY T+
Sbjct: 213 LEL--------KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTI 264
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I +C+E ++ Y+LL M ++ P+V Y ++ + +K A++ +E+M
Sbjct: 265 IQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGC 324
Query: 189 LPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T ++S++ L G ++ V V M ++ N + I + + ++AF
Sbjct: 325 RPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAF 384
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRG-KLPEARKLL---LFSLKNHHNVDIDLCNAVIL- 302
I++ + K G C + L K K+ E L L + N +++ +DL +L
Sbjct: 385 GILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLI 444
Query: 303 -GLCEINRVLEAFGLCYELVEKGL 325
GL +R AF L E+ ++ +
Sbjct: 445 HGLYRADRCKWAFDLFEEMADQDI 468
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LIH C+ ++EA + MK + SYS +I+ CQ ++D+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L DE+ + P +Y I L + K +A +V+ ++ G + D L +
Sbjct: 280 LLDEMQAQ-------NCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFN 332
Query: 127 TVIMGHCREGAYENGYELL-IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I R G ++ + + M + P+ Y+ +I F + A L++M K
Sbjct: 333 SLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Query: 186 SSYL-PKTSTWHSIL 199
S P T+H ++
Sbjct: 393 SGLCKPDIQTYHPLI 407
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+ T++ + A +EAL+V E M D+ ++ LI L + G D A
Sbjct: 290 SPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATH 349
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
+F ++ + K P ++Y + C + + +A +L+++ K G P +Y
Sbjct: 350 VF------KVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTY 403
Query: 126 MTVIMGHCREGAYENGY-ELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I + + ++L M+ + + D+ Y LI G + D+ A + E+M
Sbjct: 404 HPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEM 463
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
+P+ T +L + +K ++ V+M
Sbjct: 464 ADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIEVLM 498
>Medtr1g056160.8 | PPR containing plant protein | HC |
chr1:24576341-24582031 | 20130731
Length = 501
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 148/324 (45%), Gaps = 19/324 (5%)
Query: 13 TFNTL---IHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T NT+ + A +A+++F++++ + ++ S ++L+ LC+ ++A +++
Sbjct: 153 TLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIY 212
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTV 128
EL K P A ++ + C + +A ++++ G + +SY T+
Sbjct: 213 LEL--------KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTI 264
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I +C+E ++ Y+LL M ++ P+V Y ++ + +K A++ +E+M
Sbjct: 265 IQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGC 324
Query: 189 LPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T ++S++ L G ++ V V M ++ N + I + + ++AF
Sbjct: 325 RPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAF 384
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRG-KLPEARKLL---LFSLKNHHNVDIDLCNAVIL- 302
I++ + K G C + L K K+ E L L + N +++ +DL +L
Sbjct: 385 GILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLI 444
Query: 303 -GLCEINRVLEAFGLCYELVEKGL 325
GL +R AF L E+ ++ +
Sbjct: 445 HGLYRADRCKWAFDLFEEMADQDI 468
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LIH C+ ++EA + MK + SYS +I+ CQ ++D+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L DE+ + P +Y I L + K +A +V+ ++ G + D L +
Sbjct: 280 LLDEMQAQ-------NCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFN 332
Query: 127 TVIMGHCREGAYENGYELL-IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I R G ++ + + M + P+ Y+ +I F + A L++M K
Sbjct: 333 SLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Query: 186 SSYL-PKTSTWHSIL 199
S P T+H ++
Sbjct: 393 SGLCKPDIQTYHPLI 407
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+ T++ + A +EAL+V E M D+ ++ LI L + G D A
Sbjct: 290 SPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATH 349
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
+F ++ + K P ++Y + C + + +A +L+++ K G P +Y
Sbjct: 350 VF------KVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTY 403
Query: 126 MTVIMGHCREGAYENGY-ELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I + + ++L M+ + + D+ Y LI G + D+ A + E+M
Sbjct: 404 HPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEM 463
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
+P+ T +L + +K ++ V+M
Sbjct: 464 ADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIEVLM 498
>Medtr1g056160.5 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 148/324 (45%), Gaps = 19/324 (5%)
Query: 13 TFNTL---IHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T NT+ + A +A+++F++++ + ++ S ++L+ LC+ ++A +++
Sbjct: 153 TLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIY 212
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTV 128
EL K P A ++ + C + +A ++++ G + +SY T+
Sbjct: 213 LEL--------KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTI 264
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I +C+E ++ Y+LL M ++ P+V Y ++ + +K A++ +E+M
Sbjct: 265 IQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGC 324
Query: 189 LPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T ++S++ L G ++ V V M ++ N + I + + ++AF
Sbjct: 325 RPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAF 384
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRG-KLPEARKLL---LFSLKNHHNVDIDLCNAVIL- 302
I++ + K G C + L K K+ E L L + N +++ +DL +L
Sbjct: 385 GILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLI 444
Query: 303 -GLCEINRVLEAFGLCYELVEKGL 325
GL +R AF L E+ ++ +
Sbjct: 445 HGLYRADRCKWAFDLFEEMADQDI 468
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LIH C+ ++EA + MK + SYS +I+ CQ ++D+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L DE+ + P +Y I L + K +A +V+ ++ G + D L +
Sbjct: 280 LLDEMQAQ-------NCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFN 332
Query: 127 TVIMGHCREGAYENGYELL-IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I R G ++ + + M + P+ Y+ +I F + A L++M K
Sbjct: 333 SLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Query: 186 SSYL-PKTSTWHSIL 199
S P T+H ++
Sbjct: 393 SGLCKPDIQTYHPLI 407
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+ T++ + A +EAL+V E M D+ ++ LI L + G D A
Sbjct: 290 SPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATH 349
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
+F ++ + K P ++Y + C + + +A +L+++ K G P +Y
Sbjct: 350 VF------KVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTY 403
Query: 126 MTVIMGHCREGAYENGY-ELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I + + ++L M+ + + D+ Y LI G + D+ A + E+M
Sbjct: 404 HPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEM 463
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
+P+ T +L + +K ++ V+M
Sbjct: 464 ADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIEVLM 498
>Medtr1g056160.4 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 148/324 (45%), Gaps = 19/324 (5%)
Query: 13 TFNTL---IHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T NT+ + A +A+++F++++ + ++ S ++L+ LC+ ++A +++
Sbjct: 153 TLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIY 212
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTV 128
EL K P A ++ + C + +A ++++ G + +SY T+
Sbjct: 213 LEL--------KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTI 264
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I +C+E ++ Y+LL M ++ P+V Y ++ + +K A++ +E+M
Sbjct: 265 IQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGC 324
Query: 189 LPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T ++S++ L G ++ V V M ++ N + I + + ++AF
Sbjct: 325 RPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAF 384
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRG-KLPEARKLL---LFSLKNHHNVDIDLCNAVIL- 302
I++ + K G C + L K K+ E L L + N +++ +DL +L
Sbjct: 385 GILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLI 444
Query: 303 -GLCEINRVLEAFGLCYELVEKGL 325
GL +R AF L E+ ++ +
Sbjct: 445 HGLYRADRCKWAFDLFEEMADQDI 468
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LIH C+ ++EA + MK + SYS +I+ CQ ++D+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L DE+ + P +Y I L + K +A +V+ ++ G + D L +
Sbjct: 280 LLDEMQAQ-------NCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFN 332
Query: 127 TVIMGHCREGAYENGYELL-IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I R G ++ + + M + P+ Y+ +I F + A L++M K
Sbjct: 333 SLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Query: 186 SSYL-PKTSTWHSIL 199
S P T+H ++
Sbjct: 393 SGLCKPDIQTYHPLI 407
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+ T++ + A +EAL+V E M D+ ++ LI L + G D A
Sbjct: 290 SPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATH 349
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
+F ++ + K P ++Y + C + + +A +L+++ K G P +Y
Sbjct: 350 VF------KVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTY 403
Query: 126 MTVIMGHCREGAYENGY-ELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I + + ++L M+ + + D+ Y LI G + D+ A + E+M
Sbjct: 404 HPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEM 463
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
+P+ T +L + +K ++ V+M
Sbjct: 464 ADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIEVLM 498
>Medtr1g056160.6 | PPR containing plant protein | HC |
chr1:24576326-24581268 | 20130731
Length = 501
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 148/324 (45%), Gaps = 19/324 (5%)
Query: 13 TFNTL---IHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T NT+ + A +A+++F++++ + ++ S ++L+ LC+ ++A +++
Sbjct: 153 TLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIY 212
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTV 128
EL K P A ++ + C + +A ++++ G + +SY T+
Sbjct: 213 LEL--------KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTI 264
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I +C+E ++ Y+LL M ++ P+V Y ++ + +K A++ +E+M
Sbjct: 265 IQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGC 324
Query: 189 LPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T ++S++ L G ++ V V M ++ N + I + + ++AF
Sbjct: 325 RPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAF 384
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRG-KLPEARKLL---LFSLKNHHNVDIDLCNAVIL- 302
I++ + K G C + L K K+ E L L + N +++ +DL +L
Sbjct: 385 GILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLI 444
Query: 303 -GLCEINRVLEAFGLCYELVEKGL 325
GL +R AF L E+ ++ +
Sbjct: 445 HGLYRADRCKWAFDLFEEMADQDI 468
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LIH C+ ++EA + MK + SYS +I+ CQ ++D+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L DE+ + P +Y I L + K +A +V+ ++ G + D L +
Sbjct: 280 LLDEMQAQ-------NCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFN 332
Query: 127 TVIMGHCREGAYENGYELL-IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I R G ++ + + M + P+ Y+ +I F + A L++M K
Sbjct: 333 SLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Query: 186 SSYL-PKTSTWHSIL 199
S P T+H ++
Sbjct: 393 SGLCKPDIQTYHPLI 407
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+ T++ + A +EAL+V E M D+ ++ LI L + G D A
Sbjct: 290 SPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATH 349
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
+F ++ + K P ++Y + C + + +A +L+++ K G P +Y
Sbjct: 350 VF------KVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTY 403
Query: 126 MTVIMGHCREGAYENGY-ELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I + + ++L M+ + + D+ Y LI G + D+ A + E+M
Sbjct: 404 HPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEM 463
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
+P+ T +L + +K ++ V+M
Sbjct: 464 ADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIEVLM 498
>Medtr1g056160.7 | PPR containing plant protein | HC |
chr1:24576340-24582031 | 20130731
Length = 501
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 148/324 (45%), Gaps = 19/324 (5%)
Query: 13 TFNTL---IHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T NT+ + A +A+++F++++ + ++ S ++L+ LC+ ++A +++
Sbjct: 153 TLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIY 212
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTV 128
EL K P A ++ + C + +A ++++ G + +SY T+
Sbjct: 213 LEL--------KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTI 264
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I +C+E ++ Y+LL M ++ P+V Y ++ + +K A++ +E+M
Sbjct: 265 IQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGC 324
Query: 189 LPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T ++S++ L G ++ V V M ++ N + I + + ++AF
Sbjct: 325 RPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAF 384
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRG-KLPEARKLL---LFSLKNHHNVDIDLCNAVIL- 302
I++ + K G C + L K K+ E L L + N +++ +DL +L
Sbjct: 385 GILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLI 444
Query: 303 -GLCEINRVLEAFGLCYELVEKGL 325
GL +R AF L E+ ++ +
Sbjct: 445 HGLYRADRCKWAFDLFEEMADQDI 468
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LIH C+ ++EA + MK + SYS +I+ CQ ++D+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L DE+ + P +Y I L + K +A +V+ ++ G + D L +
Sbjct: 280 LLDEMQAQ-------NCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFN 332
Query: 127 TVIMGHCREGAYENGYELL-IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I R G ++ + + M + P+ Y+ +I F + A L++M K
Sbjct: 333 SLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Query: 186 SSYL-PKTSTWHSIL 199
S P T+H ++
Sbjct: 393 SGLCKPDIQTYHPLI 407
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+ T++ + A +EAL+V E M D+ ++ LI L + G D A
Sbjct: 290 SPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATH 349
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
+F ++ + K P ++Y + C + + +A +L+++ K G P +Y
Sbjct: 350 VF------KVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTY 403
Query: 126 MTVIMGHCREGAYENGY-ELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I + + ++L M+ + + D+ Y LI G + D+ A + E+M
Sbjct: 404 HPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEM 463
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
+P+ T +L + +K ++ V+M
Sbjct: 464 ADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIEVLM 498
>Medtr1g056160.2 | PPR containing plant protein | HC |
chr1:24576341-24582024 | 20130731
Length = 501
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 148/324 (45%), Gaps = 19/324 (5%)
Query: 13 TFNTL---IHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
T NT+ + A +A+++F++++ + ++ S ++L+ LC+ ++A +++
Sbjct: 153 TLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIY 212
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-PLSYMTV 128
EL K P A ++ + C + +A ++++ G + +SY T+
Sbjct: 213 LEL--------KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTI 264
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
I +C+E ++ Y+LL M ++ P+V Y ++ + +K A++ +E+M
Sbjct: 265 IQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGC 324
Query: 189 LPKTSTWHSILARLLEKGFPHESARV-TVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
P T ++S++ L G ++ V V M ++ N + I + + ++AF
Sbjct: 325 RPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAF 384
Query: 248 EIVELLYKKGFCVKIEEVVQFLCKRG-KLPEARKLL---LFSLKNHHNVDIDLCNAVIL- 302
I++ + K G C + L K K+ E L L + N +++ +DL +L
Sbjct: 385 GILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLI 444
Query: 303 -GLCEINRVLEAFGLCYELVEKGL 325
GL +R AF L E+ ++ +
Sbjct: 445 HGLYRADRCKWAFDLFEEMADQDI 468
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TFN LIH C+ ++EA + MK + SYS +I+ CQ ++D+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
L DE+ + P +Y I L + K +A +V+ ++ G + D L +
Sbjct: 280 LLDEMQAQ-------NCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFN 332
Query: 127 TVIMGHCREGAYENGYELL-IWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
++I R G ++ + + M + P+ Y+ +I F + A L++M K
Sbjct: 333 SLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Query: 186 SSYL-PKTSTWHSIL 199
S P T+H ++
Sbjct: 393 SGLCKPDIQTYHPLI 407
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
SP+ T+ T++ + A +EAL+V E M D+ ++ LI L + G D A
Sbjct: 290 SPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATH 349
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP--LSY 125
+F ++ + K P ++Y + C + + +A +L+++ K G P +Y
Sbjct: 350 VF------KVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTY 403
Query: 126 MTVIMGHCREGAYENGY-ELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+I + + ++L M+ + + D+ Y LI G + D+ A + E+M
Sbjct: 404 HPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEM 463
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMM 218
+P+ T +L + +K ++ V+M
Sbjct: 464 ADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIEVLM 498
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 144/345 (41%), Gaps = 19/345 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+N LI C AGN+D+ ++F M QV D + + L+ +C+ G D A +
Sbjct: 235 PNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRVDSAVEF 294
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
F+E+ K G + A +Y + C KA + +++ G + D + Y +
Sbjct: 295 FNEMKGK-------GLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYYS 347
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLP-DVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
+I + + + L++ L D Y L+ GF +K K E L KM +
Sbjct: 348 LI------SSLTIARRMDLSQLKQVGLGLDRTCYYALLSGFRKKKKLEQVSEMLNKMEEI 401
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T T++++++ L + G + ++ M++ ++ I + +A
Sbjct: 402 EVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEEGFEPSVFAYGAIIHAYCLKKNVGEA 461
Query: 247 FEIVELLYKKGFC----VKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVIL 302
+I E + V ++ LCK + +A L+ + + N ++
Sbjct: 462 MKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEKAVSLMGDMKLKSVRPNTTIYNVILK 521
Query: 303 GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
GL + + +AF L +VE + + L L A G++E+
Sbjct: 522 GLWDKRMLHKAFELMDRMVEDACSPDHVTMEILTEWLSAVGEIEK 566
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 146/366 (39%), Gaps = 31/366 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G + + + N L+ S ++ K+ M ++ + ++ ILI +LC+ D+A
Sbjct: 142 GGTVEATSCNVLLRGLGSQNDIRSMYKLLAEMDEMEIRPNVLTFDILIDHLCKARRTDEA 201
Query: 66 EKLFDEL------FEKEIVLCKF-------GSQPLAASYKPIFQYLCEHGKTRKAERVLR 112
+FD+L +E +L + P +Y + +LC+ G K +
Sbjct: 202 LGVFDKLRGTLQSWEGRRLLSLLEEMKVEKKNWPNIVTYNCLIDWLCKAGNVDKTHELFS 261
Query: 113 QIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKD 171
++ + + D ++ ++ G C+ G ++ E M + + Y LI GF +
Sbjct: 262 RMNEEQVEPDVVTLNALVNGMCKIGRVDSAVEFFNEMKGKGLEGNAVTYTALISGFCGVN 321
Query: 172 KPLLAMETLEKMLKSSYLPKTSTWHSILARL-LEKGFPHESARVTVMMLDRNIRQNINLS 230
+ A++ ++ML S P T ++S+++ L + + + + LDR
Sbjct: 322 NIVKAVQYFDEMLSSGCSPDTIVYYSLISSLTIARRMDLSQLKQVGLGLDR--------- 372
Query: 231 TKSIELLFGHGHRDKAFEIVELLYK------KGFCVKIEEVVQFLCKRGKLPEARKLLLF 284
T LL G + K ++ E+L K K V +V +L K G A K++
Sbjct: 373 TCYYALLSGFRKKKKLEQVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKE 432
Query: 285 SLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL-HQELTCLNDLVTALEARG 343
++ + A+I C V EA + E+ + + L+ AL
Sbjct: 433 MIEEGFEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTN 492
Query: 344 KVEEAA 349
VE+A
Sbjct: 493 NVEKAV 498
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENM-KNFQVTADSASYSILIRNLCQRGDYDK 64
GF P + +IH++C N+ EA+K+FE M V + Y+ILI LC+ + +K
Sbjct: 437 GFEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEK 496
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS 124
A L ++ K + +P Y I + L + KA ++M R +D S
Sbjct: 497 AVSLMGDMKLKSV-------RPNTTIYNVILKGLWDKRMLHKA----FELMDRMVEDACS 545
Query: 125 YMTVIM 130
V M
Sbjct: 546 PDHVTM 551
>Medtr4g068800.1 | PPR containing plant-like protein | HC |
chr4:25806656-25804340 | 20130731
Length = 611
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ +FNT + +G +++ +++ M ++ SYS+LI C G + EK+
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLS-YMT 127
++E+ +KEI + SY I C+ G +AE R++ G +S Y
Sbjct: 302 WEEMRKKEI-------EADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEH 354
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML-KS 186
++ G+C E+ + MLR+DF PD D ++ K + AM+ L + K
Sbjct: 355 LVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKF 414
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
+PK ++ +++ +G E+ ++ ML + + N
Sbjct: 415 DLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLN 454
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 30/191 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ +++ LI + C G +++ K++E M+ ++ AD SY+ +I C+ GD +A
Sbjct: 274 GCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRA 333
Query: 66 EKLFDEL------------------------FEKEIVLCK----FGSQPLAASYKPIFQY 97
E+ + E+ E +++ K +P A++ + +
Sbjct: 334 EEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRL 393
Query: 98 LCEHGKTRKAERVLRQIMKRGTQDPL--SYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
LC G+ +A + LR + + P SY +I G C EG + +L ML + F
Sbjct: 394 LCYKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQL 453
Query: 156 DVEIYDCLIDG 166
+ EIY+ IDG
Sbjct: 454 NSEIYEVFIDG 464
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFE-----------------NMKNFQVTADSA- 47
G SP T N LI C +D +++ + F+V +
Sbjct: 186 GISPKVATLNNLISRVCRKFGVDVGFEIYREFFRLDKEKYEISKRGYGFRGFRVVKPNVH 245
Query: 48 SYSILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKA 107
S++ + Q G +K E++++E+ E G P A SY + C+ G+
Sbjct: 246 SFNTFMLCCYQSGLVEKVEEIWNEMSE-------MGCDPNAYSYSLLIAAFCDGGRMEDC 298
Query: 108 ERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
E++ ++ K+ + D +SY T+I G C+ G E M V Y+ L+ G
Sbjct: 299 EKMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKG 358
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESAR 213
+ + A+ + ML+ + P ST ++ L KG E+ +
Sbjct: 359 YCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMK 405
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 15/253 (5%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D ++ TLI+ G EAL++ + V ++ Y+ +I +C+ + A
Sbjct: 75 GFHLDQVSYGTLINGLGKVGETKEALELLRRVDGKLVQLNAVMYNTVIDGMCKDKHVNDA 134
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGK-------TRKAERVLRQIMKRG 118
L+ E+ K I P +Y + C GK ++A+ V +MK+
Sbjct: 135 FDLYSEMVAKRI-------YPGVVTYSALIIGFCIVGKLKDAIGRVKEAKNVFAMMMKQD 187
Query: 119 TQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
+ + +Y +++ G+C + M + PD+ Y+ LI+GF + AM
Sbjct: 188 IKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAM 247
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
E+M +P T++S++ L + G + ++ M DR NI + + L
Sbjct: 248 NLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNIITYSSILNAL 307
Query: 238 FGHGHRDKAFEIV 250
+ DKA ++
Sbjct: 308 CKNHQVDKAITLL 320
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GG +PD ++N LI+ C + DEA+ +FE M ++ D +Y+ LI LC+ G +
Sbjct: 221 GGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSY 280
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
A KL DE+ ++ G P +Y I LC++ + KA +L +I +Q
Sbjct: 281 ALKLVDEMHDR-------GQPPNIITYSSILNALCKNHQVDKAITLLTKIKDEFSQ 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 117/288 (40%), Gaps = 18/288 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ PDT T T I C G + +AL + + D SY LI L + G+ +A
Sbjct: 40 GYEPDTITLTTFIKVLCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEA 99
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLS 124
+L + K + Q A Y + +C+ A + +++ KR ++
Sbjct: 100 LELLRRVDGKLV-------QLNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVT 152
Query: 125 YMTVIMGHCREGAYENGY-------ELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAM 177
Y +I+G C G ++ + M+++D P+V Y+ L+DG+ + A
Sbjct: 153 YSALIIGFCIVGKLKDAIGRVKEAKNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAK 212
Query: 178 ETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELL 237
M + P +++ ++ + E+ + M R + ++ I+ L
Sbjct: 213 SIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGL 272
Query: 238 FGHGHRDKAFEIVELLYKKG---FCVKIEEVVQFLCKRGKLPEARKLL 282
G A ++V+ ++ +G + ++ LCK ++ +A LL
Sbjct: 273 CKLGKFSYALKLVDEMHDRGQPPNIITYSSILNALCKNHQVDKAITLL 320
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 1 MKGDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG 60
MK D P+ T+N+L+ +C +++A +F M V D SY+ILI C+
Sbjct: 184 MKQD--IKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSK 241
Query: 61 DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ 120
D+A LF+E+ ++++ P +Y + LC+ GK A +++ ++ RG Q
Sbjct: 242 MTDEAMNLFEEMHCRKLI-------PDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRG-Q 293
Query: 121 DP--LSYMTVIMGHCREGAYENGYELL 145
P ++Y +++ C+ + LL
Sbjct: 294 PPNIITYSSILNALCKNHQVDKAITLL 320
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 8/213 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ T+N+L+ + +++A ++F + +T + SY ++I LC+ D+A L
Sbjct: 156 PNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANL 215
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QDPLSYMT 127
F E+ K +V P +Y + LC+ + + ++ RG + ++Y +
Sbjct: 216 FKEMHSKNMV-------PDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNS 268
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G C+ + LL + + P++ Y L+DG + + A E + +L
Sbjct: 269 LLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKG 328
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLD 220
Y + ++ L ++GF E+ + M D
Sbjct: 329 YQLDARIYTVMINGLCKEGFLDEALSLLSKMED 361
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 130/328 (39%), Gaps = 54/328 (16%)
Query: 4 DGGFSPDTCTFNTLIHSHCS--------------AGNLDEALKVFENMKNFQVTADSASY 49
D PD T+NTLI+S + G + EA+ + M + VT + ++
Sbjct: 67 DKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTF 126
Query: 50 SILIRNLCQRGDYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAER 109
+ L+ LC+ G+ KA + + ++ + +P +Y + + KA++
Sbjct: 127 TTLVDGLCKDGEVKKARNVLAIMIKQRV-------EPNIVTYNSLMDGYFLVKEVNKAKQ 179
Query: 110 VLRQIMKRG-TQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFL 168
+ I RG T + SY +I G C+ + L M ++ +PD Y+ LIDG
Sbjct: 180 LFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLC 239
Query: 169 QKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNIN 228
+ + + + +M T++S+L L + ++ + + ++ IR NI
Sbjct: 240 KSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIY 299
Query: 229 LSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKN 288
T +V LCK G+L +A+++ L
Sbjct: 300 TYTI--------------------------------LVDGLCKNGRLRDAQEVYQDLLNK 327
Query: 289 HHNVDIDLCNAVILGLCEINRVLEAFGL 316
+ +D + +I GLC+ + EA L
Sbjct: 328 GYQLDARIYTVMINGLCKEGFLDEALSL 355
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PDT +N+LI C + + + M + A+ +Y+ L+ LC+ DKA L
Sbjct: 226 PDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITL 285
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
++ + G +P +Y + LC++G+ R A+ V + ++ +G Q D Y
Sbjct: 286 LTKIKNQ-------GIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTV 338
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDK 172
+I G C+EG + LL M PD Y+ I + D+
Sbjct: 339 MINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDR 383
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQ-RGDYDK 64
G +P+ ++ +I+ C +DEA +F+ M + + D+ +Y+ LI LC+ R YD
Sbjct: 188 GMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDV 247
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL- 123
+ E+ ++ G +Y + LC++ + KA +L +I +G + +
Sbjct: 248 WD-FIGEMHDR-------GQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIY 299
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++ G C+ G + E+ +L + + D IY +I+G ++ A+ L KM
Sbjct: 300 TYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKM 359
Query: 184 LKSSYLPKTSTWHSILARLLE 204
+ P T+ + L E
Sbjct: 360 EDNKCTPDGVTYEITIRALFE 380
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 109/245 (44%), Gaps = 8/245 (3%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
+P+ TF TL+ C G + +A V M +V + +Y+ L+ + +KA++
Sbjct: 120 TPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQ 179
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYM 126
LF+ + + G P SYK + LC++ +A + +++ K D ++Y
Sbjct: 180 LFNTISLR-------GMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYN 232
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKS 186
++I G C+ + ++ + M R ++ Y+ L+DG + + A+ L K+
Sbjct: 233 SLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQ 292
Query: 187 SYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKA 246
P T+ ++ L + G ++ V +L++ + + + T I L G D+A
Sbjct: 293 GIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEA 352
Query: 247 FEIVE 251
++
Sbjct: 353 LSLLS 357
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD T+NT + + C AG +D A +VFE M + +V + +YS ++ + + A L
Sbjct: 352 PDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNL 411
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLSYMT 127
++E+ + + L + L Y+ + G +A +++ + G +D ++Y
Sbjct: 412 YEEMKLRSVCLDRVSYNTLVGIYEKL-------GNLDEAIEKCKEMERSGINRDVVTYNA 464
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+ + G Y+ L M R+ P+ Y +ID + + + AM+ + +
Sbjct: 465 LLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMAR 524
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNI 227
+ +I+ L + G S + + M+++ I+ N+
Sbjct: 525 LEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNV 564
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D ++NTL+ + GNLDEA++ + M+ + D +Y+ L+ + G YD+ +LF
Sbjct: 423 DRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLF 482
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQI-MKRGTQDPLSYMTV 128
+E+ + I P +Y + + ++A V R+ M R D + Y +
Sbjct: 483 EEMKARNIY-------PNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAI 535
Query: 129 IMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ 169
I C+ G E+ LL+ M+ + P+V ++ +ID Q
Sbjct: 536 IDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQ 576
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 150/375 (40%), Gaps = 57/375 (15%)
Query: 6 GFSPDTCTFNTLIHSHCSAG-NLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P+ T+N++I + + D +K ++ M + D +Y+ L+ +G ++
Sbjct: 278 GVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEM 337
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPL 123
A+KL E+ + IV P +Y LC+ G+ A RV ++ KR + +
Sbjct: 338 AQKLLSEMDHRCIV-------PDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVV 390
Query: 124 SYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKM 183
+Y ++ G+ + E+ L M R D Y+ L+ + + A+E ++M
Sbjct: 391 TYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEM 450
Query: 184 LKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR 243
+S T++++L+ + G E R+ M RNI N + I++ +
Sbjct: 451 ERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMY----TK 506
Query: 244 DKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILG 303
+ F+ +Y++ ++E +D+ +A+I
Sbjct: 507 GEMFQEAMDVYREFKMARLE----------------------------IDVVFYSAIIDT 538
Query: 304 LCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIPGLE---N 360
LC+ + + L ++EKG+ + N ++ A S++ P LE N
Sbjct: 539 LCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDA-------------SQQSPTLEYGVN 585
Query: 361 LDRSVLSYSSKKSRP 375
+ Y ++S P
Sbjct: 586 GSSDAIDYPIEQSSP 600
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 22/244 (9%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D N+LI +C G+++ A+KVF M+ D S++ ++ L + GD D A
Sbjct: 154 GFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEE----RDVVSWNSMVGGLVKNGDLDGA 209
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
K+FDE+ E++ V S+ + + G+ KA ++ ++ +R D +S+
Sbjct: 210 LKVFDEMPERDRV-----------SWNTMLDGFTKAGEMDKAFKLFERMAER---DIVSW 255
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T++ G+ + G + L R + ++ ++ +I G+ +K + AM ++M K
Sbjct: 256 STMVCGYSKNGDMDMARML----FDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEK 311
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
S + SILA E G ++ L R + + I++ G D
Sbjct: 312 SGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDD 371
Query: 246 AFEI 249
AF +
Sbjct: 372 AFRV 375
>Medtr3g083680.1 | PPR containing plant-like protein | HC |
chr3:37762257-37764734 | 20130731
Length = 684
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G P+ ++NT++ + AG EA+ +F M+ V + +Y+ +I + ++DKA
Sbjct: 366 GIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKA 425
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS 124
L E+ + G QP A +Y I + GK +A + ++ G + D +
Sbjct: 426 TNLIQEMQSR-------GIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEIL 478
Query: 125 YMTVIMGHCREGAYENGYELL---------------------------IWMLRRDF---- 153
Y T+I+ + + G + LL +W+ R+ F
Sbjct: 479 YQTMIVAYQKAGLVAHAKRLLNELKQPDNVSRETAITILARAGKVDEAMWVFRQAFDAGE 538
Query: 154 LPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTST 194
+ D+ ++ C+ID F ++ K +E EKM + + P ++
Sbjct: 539 VKDISVFGCIIDIFSRERKYAHVVEVFEKMREVGHFPDSNV 579
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 141/361 (39%), Gaps = 30/361 (8%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILI---RNLCQRGDY 62
G SPD T++TLI G D + + M+ V+ D YS LI R LC DY
Sbjct: 190 GLSPDKYTYSTLITHFSKQGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSRKLC---DY 246
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTR--KAERVLRQIMKRGTQ 120
KA +F+ L GS + + +GK + + R+L Q M+
Sbjct: 247 SKAISIFNAL---------KGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGV 297
Query: 121 DP--LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAME 178
+P SY T++ + + L M + D+ + +ID + Q A
Sbjct: 298 NPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADC 357
Query: 179 TLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLF 238
M K P +++++L E G E+ + +M + + QN+ I +
Sbjct: 358 FFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYG 417
Query: 239 GHGHRDKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
DKA +++ + +G + ++ K GKL R +LF V ID
Sbjct: 418 KSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLD--RAAMLFHKLRTSGVKID 475
Query: 296 --LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISK 353
L +I+ + V A L EL + T +T L GKV+EA ++ +
Sbjct: 476 EILYQTMIVAYQKAGLVAHAKRLLNELKQPDNVSRETA----ITILARAGKVDEAMWVFR 531
Query: 354 R 354
+
Sbjct: 532 Q 532
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 161/413 (38%), Gaps = 69/413 (16%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D PD T+N L+ ++ AG DE V + M + V ++ +Y+ +I + GD D
Sbjct: 371 DNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDAD 430
Query: 64 KAEKLFDELFEKEIV--LCKF--------------------------GSQPLAASYKPIF 95
KA ++F ++ E V +C + G P ++ +
Sbjct: 431 KALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTML 490
Query: 96 QYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFL 154
E GK + +VLR++ G + D ++ T+I + R G+ + ++ M+ F
Sbjct: 491 AVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFT 550
Query: 155 PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSIL--------ARLLEK- 205
P + Y+ L++ ++ A + M K + P +++ +L R LEK
Sbjct: 551 PCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKV 610
Query: 206 --------GFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHR-------------- 243
FP T+++ + RQ + ++ L +G++
Sbjct: 611 EMEIYDGHVFPSWMLLRTLVLTNYKCRQ-LKGMERAFHQLQNNGYKLDMVVINSMLSMFV 669
Query: 244 -----DKAFEIVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
+KA E++++++ G V ++ + G +A ++L + + D+
Sbjct: 670 RNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVV 729
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEA 348
N VI G C+ V EA + E+ G+ N ++ G EA
Sbjct: 730 SYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEA 782
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G+ P T T+N+++ AG EAL + + M++ D+ +Y+ L+ + G +D+
Sbjct: 338 GYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEG 397
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ D + K G P A +Y + + G KA V Q+ + G + +
Sbjct: 398 AAVIDTMASK-------GVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCT 450
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y V++ + E+ ++L M PD ++ ++ +K K + L +M
Sbjct: 451 YNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMK 510
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRD 244
+ P T++++++ G + A++ M+ I + L G+
Sbjct: 511 NCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWK 570
Query: 245 KAFEIVELLYKKGF 258
A +V + KKGF
Sbjct: 571 AAESVVLDMRKKGF 584
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G+ D N+++ L++A ++ + + + + +Y+ LI + GD
Sbjct: 651 NNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCW 710
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQD-P 122
KAE++ ++ G P SY + + C+ G ++A R+L ++ G Q P
Sbjct: 711 KAEEMLKDIQNS-------GISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCP 763
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+++ T + + G + E++ +M+ +P+ Y +IDG+++ K AM+ + K
Sbjct: 764 ITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSK 823
Query: 183 M 183
+
Sbjct: 824 I 824
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 146/415 (35%), Gaps = 84/415 (20%)
Query: 24 AGNLDEALKVFE----NMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFD--------- 70
+GN + A +FE N + + D S +++ L + Y A KLFD
Sbjct: 176 SGNWERAFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFDIIPVEEYSL 235
Query: 71 ----------------------ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAE 108
E+FEK + + G P +Y + + G+
Sbjct: 236 DVKACTTVLHAYARTGKYKRAIEIFEK---MKETGLDPTLVTYNVMLDVYGKMGRAWSMI 292
Query: 109 -RVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG 166
+L ++ +G + D + TVI REG + + + P Y+ ++
Sbjct: 293 LELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQV 352
Query: 167 FLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN 226
F + A+ L++M ++ P T++ ++A + GF E A V M + + N
Sbjct: 353 FGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPN 412
Query: 227 INLSTKSIELLFGHGHRDKAFEIVELLYKKGFCV----KIEEVVQFLCKRGKLPEARKLL 282
T I G DKA E+ + + G CV V+ L KR + + K+L
Sbjct: 413 AITYTTVINAYGKAGDADKALEVFGQMKELG-CVPNVCTYNNVLVLLGKRSRSEDMIKIL 471
Query: 283 LFSLKNHHNVDIDLCNAVILGLC--------------------------EINRVLEAFGL 316
N D N +L +C N ++ A+G
Sbjct: 472 CDMKLNGCPPDRITWNT-MLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGR 530
Query: 317 C----------YELVEKGLHQELTCLNDLVTALEARG--KVEEAAFISKRIPGLE 359
C E+V G +T N L+ AL RG K E+ + R G +
Sbjct: 531 CGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFK 585
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 29/251 (11%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
GF+P T+N L+++ GN A V +M+ + SYS+L+ + G+
Sbjct: 547 AGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRG 606
Query: 65 AEKLFDELFE----------KEIVLCKFGSQPLAA-----------SYK-------PIFQ 96
EK+ E+++ + +VL + + L YK +
Sbjct: 607 LEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLS 666
Query: 97 YLCEHGKTRKAERVLRQIMKRGTQDPL-SYMTVIMGHCREGAYENGYELLIWMLRRDFLP 155
+ K KA +L I G Q L +Y ++I + R G E+L + P
Sbjct: 667 MFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISP 726
Query: 156 DVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVT 215
DV Y+ +I GF +K A+ L +M + P T+++ ++ G E+ V
Sbjct: 727 DVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVI 786
Query: 216 VMMLDRNIRQN 226
M++ N
Sbjct: 787 RYMIEHGCMPN 797
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD T+N+L+ +C +++A K + A+ S LI LC+ A
Sbjct: 75 GIKPDVVTYNSLMDGYCIVKEVNKAKK--------KCIANKFFRSTLIDVLCKSRRVSYA 126
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-S 124
+L DE+ ++ G QP +Y I LC+ KA +L ++ +G + + +
Sbjct: 127 LELVDEMHDR-------GQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNT 179
Query: 125 YMTVIMGHCREGAYENG---YELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
Y ++ G CR G E+ +E L + L DV Y +I GF K + L
Sbjct: 180 YTILVKGLCRSGKLEDARKVFEDLGYNL------DVYAYTVMIQGFCDKGLFDEVLALLS 233
Query: 182 KMLKSSYLPKTSTWHSILARLLEK 205
KM ++ +P T+ I+ L EK
Sbjct: 234 KMEENGCIPDAKTYEIIILSLFEK 257
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 15 NTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDELFE 74
+TLI C + + AL++ + M + D +Y+ ++ LC++ KA L +L +
Sbjct: 111 STLIDVLCKSRRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKD 170
Query: 75 KEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGHCR 134
+ G +P +Y + + LC GK A +V + D +Y +I G C
Sbjct: 171 Q-------GIRPNMNTYTILVKGLCRSGKLEDARKVFEDL--GYNLDVYAYTVMIQGFCD 221
Query: 135 EGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
+G ++ LL M +PD + Y+ +I +KD+ +A + L +M+ L
Sbjct: 222 KGLFDEVLALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 109/270 (40%), Gaps = 28/270 (10%)
Query: 84 SQPLAASYKPIFQYLCEHGKTRKAERVL-RQIMKRGTQDPLSYMTVIMGHCREGAYENGY 142
+ P +Y + C GK R A + I + + ++ ++ G C+EG +
Sbjct: 6 TSPNVVTYSALISGFCIVGKLRDAIDFFNKMIFENINPNVYTFTILVDGFCKEGRVKEAK 65
Query: 143 ELLIWMLRRDFLPDVEIYDCLIDGF--------------------------LQKDKPL-L 175
+L M+++ PDV Y+ L+DG+ L K + +
Sbjct: 66 NVLAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKAKKKCIANKFFRSTLIDVLCKSRRVSY 125
Query: 176 AMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIE 235
A+E +++M P T++SIL L +K ++ + + D+ IR N+N T ++
Sbjct: 126 ALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNTYTILVK 185
Query: 236 LLFGHGHRDKAFEIVELLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
L G + A ++ E L ++Q C +G E LL +N D
Sbjct: 186 GLCRSGKLEDARKVFEDLGYNLDVYAYTVMIQGFCDKGLFDEVLALLSKMEENGCIPDAK 245
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGL 325
+IL L E + A L E++ +GL
Sbjct: 246 TYEIIILSLFEKDENDMAEKLLREMIMRGL 275
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 25/140 (17%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G PD T+N+++ + C + +A+ + +K+ + + +Y+IL++ LC+ G +
Sbjct: 135 DRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNTYTILVKGLCRSGKLE 194
Query: 64 KAEKLFDE---------------------LFEKEIVLC----KFGSQPLAASYKPIFQYL 98
A K+F++ LF++ + L + G P A +Y+ I L
Sbjct: 195 DARKVFEDLGYNLDVYAYTVMIQGFCDKGLFDEVLALLSKMEENGCIPDAKTYEIIILSL 254
Query: 99 CEHGKTRKAERVLRQIMKRG 118
E + AE++LR+++ RG
Sbjct: 255 FEKDENDMAEKLLREMIMRG 274
>Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24888340-24886119 | 20130731
Length = 344
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 35/207 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNL-------------------DEALKVFENMKNFQVTADS 46
G P T+NTL++ +C + DEA+ ++E M + D
Sbjct: 150 GIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNIPDV 209
Query: 47 ASYSILIRNLCQRG---DYDKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGK 103
+YS L+ + RG D + D G +P +Y + LC+ GK
Sbjct: 210 VTYSSLVDIMHDRGQPPDIITYNSILD------------GIRPDMYTYTIFIKGLCQSGK 257
Query: 104 TRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDC 162
+ A +V ++ +G D +Y +I G C +G ++ LL M +PD +IY+
Sbjct: 258 LKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKMEDNGCIPDAKIYEI 317
Query: 163 LIDGFLQKDKPLLAMETLEKMLKSSYL 189
+I +KD+ +A + L +M+ L
Sbjct: 318 VILSLFEKDENDMAEKLLREMIARGLL 344
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 136/321 (42%), Gaps = 29/321 (9%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
P+ ++T+I C +++A ++ M +++ D +YS LI C G + L
Sbjct: 48 PNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGL 107
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-LSYMT 127
F+++ + I P ++ C+ G+ ++A+ VL +MK G + ++Y T
Sbjct: 108 FNKMTAENI-------NPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNT 160
Query: 128 VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
++ G+C ++ M + + +ID A+ E+M
Sbjct: 161 LMNGYCLVKEMNMAKDIFNTMNQSGVVK-------MIDE---------AINLYEEMHCRK 204
Query: 188 YLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAF 247
+P T+ S++ + ++G P + +T + IR ++ T I+ L G A
Sbjct: 205 NIPDVVTYSSLVDIMHDRGQPPDI--ITYNSILDGIRPDMYTYTIFIKGLCQSGKLKDAR 262
Query: 248 EIVELLYKKGFCVKIEE---VVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGL 304
++ E L KG+ + + ++Q C +G EA LL N D + VIL L
Sbjct: 263 KVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKMEDNGCIPDAKIYEIVILSL 322
Query: 305 CEINRVLEAFGLCYELVEKGL 325
E + A L E++ +GL
Sbjct: 323 FEKDENDMAEKLLREMIARGL 343
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 15/212 (7%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+PD TFN + + C G + EA V M + +Y+ L+ C + + A+
Sbjct: 116 INPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAK 175
Query: 67 KLFDELFEKEIVL-------------CKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQ 113
+F+ + + +V C+ + P +Y + + + G+
Sbjct: 176 DIFNTMNQSGVVKMIDEAINLYEEMHCR-KNIPDVVTYSSLVDIMHDRGQPPDI-ITYNS 233
Query: 114 IMKRGTQDPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKP 173
I+ D +Y I G C+ G ++ ++ +L + + DV Y +I GF K
Sbjct: 234 ILDGIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLF 293
Query: 174 LLAMETLEKMLKSSYLPKTSTWHSILARLLEK 205
A+ L KM + +P + ++ L EK
Sbjct: 294 KEALALLSKMEDNGCIPDAKIYEIVILSLFEK 325
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 28/280 (10%)
Query: 99 CEHGKTRKAERVLRQIMKRGTQ-DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDV 157
C+ G+TR A ++LR++ + Q + + Y T+I G C+ + ++L M+ + PDV
Sbjct: 26 CKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDV 85
Query: 158 EIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVM 217
Y LI GF K + KM + P T++ + ++G E+ V M
Sbjct: 86 ITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSM 145
Query: 218 MLDRNIRQNI----------------NLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVK 261
M+ I+ ++ N++ + G E + LY++ C K
Sbjct: 146 MMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVVKMIDEAIN-LYEEMHCRK 204
Query: 262 -IEEVVQF------LCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVLEAF 314
I +VV + + RG+ P+ + S+ + D+ I GLC+ ++ +A
Sbjct: 205 NIPDVVTYSSLVDIMHDRGQPPDI--ITYNSILDGIRPDMYTYTIFIKGLCQSGKLKDAR 262
Query: 315 GLCYELVEKGLHQELTCLNDLVTALEARGKVEEA-AFISK 353
+ +L+ KG + ++ ++ +G +EA A +SK
Sbjct: 263 KVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSK 302
>Medtr6g045263.2 | PPR containing plant-like protein | HC |
chr6:16192577-16189964 | 20130731
Length = 532
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 12/194 (6%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G G SPD T+N ++H G L +A+++ +M+ + ++ LI L + G
Sbjct: 338 GGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHL 397
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
D E +FDE + + G P +Y + + KA+++ +++ RG +
Sbjct: 398 DDCEHIFDE-------MVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPN 450
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y ++I G C G ++ +L M + P+ +Y L+ + K A + L
Sbjct: 451 VFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLR 510
Query: 182 KMLKSS----YLPK 191
+M++ +LPK
Sbjct: 511 QMMEKGRNVHHLPK 524
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 98/217 (45%), Gaps = 8/217 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D T+N ++ + G L++ ++F M ++ D +Y+I++ L + G+ KA
Sbjct: 306 GFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKA 365
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+L + + E+ G +P + + L G E + ++++ G D ++
Sbjct: 366 VELLNHMRER-------GIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVA 418
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G+ +E ++ M+ R +P+V Y+ +I GF K A L++M
Sbjct: 419 YTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEME 478
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDR 221
P + +++ L + G + +V M+++
Sbjct: 479 TKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 515
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 106/252 (42%), Gaps = 8/252 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+ P ++N ++H V++ M +D +Y+I++ + G ++
Sbjct: 272 YRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSDVFTYNIVMVAKYRLGKLNQLY 331
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SY 125
+LF E+ G P +Y I L G+ KA +L + +RG + + +
Sbjct: 332 RLFHEMGGN-------GLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHF 384
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G R G ++ + M+R +PDV Y +I G++ + A + +KM+
Sbjct: 385 TTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMIS 444
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+P T++S++ G E+ + M + N + + + L G +
Sbjct: 445 RGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSR 504
Query: 246 AFEIVELLYKKG 257
A +++ + +KG
Sbjct: 505 ARKVLRQMMEKG 516
>Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:37765859-37769483 | 20130731
Length = 724
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 147/344 (42%), Gaps = 24/344 (6%)
Query: 5 GGFSPDTCTFNTLIHSHC--SAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
GG+ P FN L+ + +G+ AL V++ M V + + L+ L
Sbjct: 158 GGYKPPIQVFNALLGAIVKEESGDFQNALLVYKEMVKAGVLPTVDTLNCLLEILFTIDRV 217
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP 122
D A F + K G P + +++ + + L E+G+ +A VL +++K Q
Sbjct: 218 DLALDQFRRMNNK-------GCSPNSKTFEILVKGLIENGQVDEAVAVLEEMLKLECQPD 270
Query: 123 LSYMT-VIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
LS+ T I CRE E G L M D +P+ IY+ LI + K A+ +
Sbjct: 271 LSFYTCTIPLFCRENKVEEGVRLFRMMKDSDLVPEALIYEALIQCLCKNLKLDSAVNLIN 330
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMML-DRNIRQNINLSTKSIELLFGH 240
+M++S LP + + ++ E G E+ +M L D+ + + + LL G
Sbjct: 331 EMIESGILPNENVFVHMINCYCELGKIDEA----IMFLEDKQVSETAPFNV----LLEGC 382
Query: 241 GHRDK---AFEIVELLYKKGF--CVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
+ K A ++E + + C V++ LC+ + +A LL +K +D
Sbjct: 383 CNAGKILVANVLLETMTDRNIADCQSWNIVIRRLCENEETEKAYTLLGRMIKFSVVLDGS 442
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTAL 339
+A++LG C + EA L + + ++T +LV L
Sbjct: 443 TYSALVLGNCRVREYDEAMELFRRICARCWSLDITSYTELVDGL 486
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
+ G P+ F +I+ +C G +DEA+ E+ + +++A +++L+ C G
Sbjct: 334 ESGILPNENVFVHMINCYCELGKIDEAIMFLEDKQ----VSETAPFNVLLEGCCNAGKIL 389
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DP 122
A L + + ++ I C+ S+ + + LCE+ +T KA +L +++K D
Sbjct: 390 VANVLLETMTDRNIADCQ--------SWNIVIRRLCENEETEKAYTLLGRMIKFSVVLDG 441
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGF 167
+Y +++G+CR Y+ EL + R + D+ Y L+DG
Sbjct: 442 STYSALVLGNCRVREYDEAMELFRRICARCWSLDITSYTELVDGL 486
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 120/276 (43%), Gaps = 24/276 (8%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
+ G SP++ TF L+ G +DEA+ V E M + D + Y+ I C+
Sbjct: 228 NNKGCSPNSKTFEILVKGLIENGQVDEAVAVLEEMLKLECQPDLSFYTCTIPLFCRENKV 287
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGT-QD 121
++ +LF + + ++V P A Y+ + Q LC++ K A ++ ++++ G +
Sbjct: 288 EEGVRLFRMMKDSDLV-------PEALIYEALIQCLCKNLKLDSAVNLINEMIESGILPN 340
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
++ +I +C G + I L + + ++ L++G K L+A LE
Sbjct: 341 ENVFVHMINCYCELGKIDEA----IMFLEDKQVSETAPFNVLLEGCCNAGKILVANVLLE 396
Query: 182 KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHG 241
M + + +W+ ++ RL E +E +L R I+ ++ L + L
Sbjct: 397 TMTDRN-IADCQSWNIVIRRLCE----NEETEKAYTLLGRMIKFSVVLDGSTYSALVLGN 451
Query: 242 HR----DKAFEIVELLYKKGFCVKI---EEVVQFLC 270
R D+A E+ + + + + I E+V LC
Sbjct: 452 CRVREYDEAMELFRRICARCWSLDITSYTELVDGLC 487
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 27/329 (8%)
Query: 5 GGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDK 64
G P T N L+ + +D AL F M N + +S ++ IL++ L + G D+
Sbjct: 195 AGVLPTVDTLNCLLEILFTIDRVDLALDQFRRMNNKGCSPNSKTFEILVKGLIENGQVDE 254
Query: 65 AEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDP-- 122
A + +E+ K QP + Y C K + R+ R +MK P
Sbjct: 255 AVAVLEEML-------KLECQPDLSFYTCTIPLFCRENKVEEGVRLFR-MMKDSDLVPEA 306
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
L Y +I C+ ++ L+ M+ LP+ ++ +I+ + + K A+ LE
Sbjct: 307 LIYEALIQCLCKNLKLDSAVNLINEMIESGILPNENVFVHMINCYCELGKIDEAIMFLE- 365
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIR--QNINLSTKSIELLFGH 240
+ +T+ ++ +L G + + M DRNI Q+ N+ I L +
Sbjct: 366 ---DKQVSETAPFNVLLEGCCNAGKILVANVLLETMTDRNIADCQSWNI---VIRRLCEN 419
Query: 241 GHRDKAFEIVELLYKKGFCVKIE-----EVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
+KA+ ++ + K F V ++ +V C+ + EA +L ++DI
Sbjct: 420 EETEKAYTLLGRMIK--FSVVLDGSTYSALVLGNCRVREYDEAMELFRRICARCWSLDIT 477
Query: 296 LCNAVILGLC-EINRVLEAFGLCYELVEK 323
++ GLC +INR A + Y + +K
Sbjct: 478 SYTELVDGLCDDINRCQHAIEVFYYMSKK 506
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 133/313 (42%), Gaps = 26/313 (8%)
Query: 15 NTLIHSHCSAGNLDEALKVF---ENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDE 71
++LI +L+ A+K+F K+F T+++ Y +I L G+ + E
Sbjct: 62 DSLIQVLNRTSDLNSAVKIFIWASIQKSFHHTSNT--YFEIILKLGLAGNVLEMEN---- 115
Query: 72 LFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMG 131
F +V +F Q + + + EH + ++ VL + G + P+ ++G
Sbjct: 116 -FVHNMVKNRF--QGVEKALVSLIHTFVEHCRIKEGLVVLVNMNSGGYKPPIQVFNALLG 172
Query: 132 HC---REGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
G ++N + M++ LP V+ +CL++ D+ LA++ +M
Sbjct: 173 AIVKEESGDFQNALLVYKEMVKAGVLPTVDTLNCLLEILFTIDRVDLALDQFRRMNNKGC 232
Query: 189 LPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFE 248
P + T+ ++ L+E G E+ V ML + +++ T +I L ++
Sbjct: 233 SPNSKTFEILVKGLIENGQVDEAVAVLEEMLKLECQPDLSFYTCTIPLFCRENKVEEGVR 292
Query: 249 IVELLYKKGF---CVKIEEVVQFLCKRGKLPEARKLLLFSLKN----HHNVDIDLCNAVI 301
+ ++ + E ++Q LCK KL A L+ +++ + NV + + N
Sbjct: 293 LFRMMKDSDLVPEALIYEALIQCLCKNLKLDSAVNLINEMIESGILPNENVFVHMINC-- 350
Query: 302 LGLCEINRVLEAF 314
CE+ ++ EA
Sbjct: 351 --YCELGKIDEAI 361
>Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:55951491-55948959 | 20130731
Length = 706
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 110/281 (39%), Gaps = 45/281 (16%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PD TF+T+I S D+A++ FE M F D +YS++I + + GD D A
Sbjct: 211 GVKPDNVTFSTIISCARSCYLPDKAVEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMA 270
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSY 125
L+D R ++ +P ++
Sbjct: 271 LNLYD-----------------------------------------RARTEKWRIEPATF 289
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I + G Y+ + M P++ +Y+ L+D + +P A ++M+
Sbjct: 290 STLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMIN 349
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+ LP +T+ S+L F ++ V M ++ + N +L + + G+ D
Sbjct: 350 NDILPNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDL 409
Query: 246 AFEIVELLYKKGFCV----KIEEVVQFLCKRGKLPEARKLL 282
AFEI E + C ++ G++ EA +++
Sbjct: 410 AFEIFEDMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMM 450
>Medtr8g102650.1 | PPR containing plant-like protein | HC |
chr8:43222902-43226104 | 20130731
Length = 918
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 161/372 (43%), Gaps = 34/372 (9%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFE---NMKNFQVTADSASYSILIRNLCQRGDYDKA 65
P T N +I + A +A+ +F N N + + SY+ +I C G D A
Sbjct: 115 PTVFTCNAIIAAMYRAKRYSDAIALFHFFFNQSN--LVPNIVSYNNVINTHCDEGRVDVA 172
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIM-KRGTQDPLS 124
+++ + E FG P + +Y+ + + L G+ +A +L +++ K D +
Sbjct: 173 LEVYRHIIEH----APFG--PSSVTYRHLTKGLISVGRIDEANDLLVEMLAKNHGADSMV 226
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDG-----FLQKDKPLLAMET 179
Y +I G G + EL + R +YD +++ F ++ + AM++
Sbjct: 227 YNNLISGFLELGNLDKANELFDELKGR-----CSVYDGVVNATYMEWFFKQGRDKEAMDS 281
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQN---INLSTKSIEL 236
+ + + +T + +L LL+ E+ ++ MLD + N +N T +I +
Sbjct: 282 YKSFMDREFRMTPATCNVLLEVLLKHDKKKEAWKLFDQMLDNHTPPNFQAVNSDTFNIMV 341
Query: 237 --LFGHGHRDKAFE----IVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLK 287
F HG D+A + + + K F + + +V C+ G + EA L SL
Sbjct: 342 NECFKHGKFDEALDTFRKVGTKINSKPFIMDVAGYRNIVSRFCEIGMMSEADTLFQESLS 401
Query: 288 NHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
H + D+ A+I G ++ + +A + ++V++GL T N + L GKV E
Sbjct: 402 KHLSADVPTHTAMIDGYLKVGNIDDALRVFNKMVDRGLRVTATFGNRVFDELIKNGKVIE 461
Query: 348 AAFISKRIPGLE 359
A I ++ G +
Sbjct: 462 CAQILSKMGGQD 473
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 145/357 (40%), Gaps = 26/357 (7%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
F P + T+ L S G +DEA + M ADS Y+ LI + G+ DKA
Sbjct: 185 FGPSSVTYRHLTKGLISVGRIDEANDLLVEMLAKNHGADSMVYNNLISGFLELGNLDKAN 244
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLS- 124
+LFDEL + C + A+Y ++ + G+ ++A + M R + P +
Sbjct: 245 ELFDELKGR----CSVYDGVVNATY---MEWFFKQGRDKEAMDSYKSFMDREFRMTPATC 297
Query: 125 --YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVE-----IYDCLIDGFLQKDKPLLAM 177
+ V++ H ++ + ++L ML P+ + ++ +++ + K A+
Sbjct: 298 NVLLEVLLKHDKK---KEAWKLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFDEAL 354
Query: 178 ETLE----KMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKS 233
+T K+ ++ + + +I++R E G E+ + L +++ ++ T
Sbjct: 355 DTFRKVGTKINSKPFIMDVAGYRNIVSRFCEIGMMSEADTLFQESLSKHLSADVPTHTAM 414
Query: 234 IELLFGHGHRDKAFEIVELLYKKGFCVKI---EEVVQFLCKRGKLPEARKLLLFSLKNHH 290
I+ G+ D A + + +G V V L K GK+ E ++L
Sbjct: 415 IDGYLKVGNIDDALRVFNKMVDRGLRVTATFGNRVFDELIKNGKVIECAQILSKMGGQDP 474
Query: 291 NVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEE 347
D VI GLC + ++ L E++ G+ + + GK EE
Sbjct: 475 KPDPTCYEVVIKGLCAEGLLDKSRELLDEVMRYGVGVTPALRESVTKVFKNAGKGEE 531
>Medtr7g017530.1 | PPR containing plant protein | HC |
chr7:5596340-5592826 | 20130731
Length = 849
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 146/343 (42%), Gaps = 22/343 (6%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRG--DYD 63
G +F+ +I ++ G+ +A+ +F +M+++ V + SY+ LI + +G D+D
Sbjct: 208 GHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLI-DAGAKGEVDFD 266
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDP 122
K FDE+ + IV P +Y + G A+++L ++ ++G +D
Sbjct: 267 VVVKFFDEMLAEGIV-------PDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDA 319
Query: 123 LSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEK 182
+Y T + C+ G + +L M R P V Y +IDG + + A+ E+
Sbjct: 320 FTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEE 379
Query: 183 MLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGH 242
M S ++++++ + G E+ M +++++ LL G+G
Sbjct: 380 MKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDV---VTYNALLSGYG- 435
Query: 243 RDKAFEIVELLYKKGFCVKI-------EEVVQFLCKRGKLPEARKLLLFSLKNHHNVDID 295
R ++ V L+++ I ++ K G EA + K VD+
Sbjct: 436 RYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVV 495
Query: 296 LCNAVILGLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTA 338
++I LC+ V + L ++EKG+ + N ++ A
Sbjct: 496 FYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDA 538
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 8 SPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEK 67
S D ++NT++ + G DEA+ + M++ + D +Y+ L+ + G YD+ +
Sbjct: 386 SVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRR 445
Query: 68 LFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYM 126
LF+E+ I P +Y + + G ++A V + K + D + Y
Sbjct: 446 LFEEMKAWNIY-------PNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYT 498
Query: 127 TVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQ 169
++I C+ G E+ LLI M+ + P+V ++ +ID Q
Sbjct: 499 SIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQ 541
>Medtr6g045263.1 | PPR containing plant-like protein | HC |
chr6:16192167-16188301 | 20130731
Length = 508
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 12/194 (6%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G G SPD T+N ++H G L +A+++ +M+ + ++ LI L + G
Sbjct: 314 GGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHL 373
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQD 121
D E +FDE + + G P +Y + + KA+++ +++ RG +
Sbjct: 374 DDCEHIFDE-------MVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPN 426
Query: 122 PLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLE 181
+Y ++I G C G ++ +L M + P+ +Y L+ + K A + L
Sbjct: 427 VFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLR 486
Query: 182 KMLKSS----YLPK 191
+M++ +LPK
Sbjct: 487 QMMEKGRNVHHLPK 500
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 98/217 (45%), Gaps = 8/217 (3%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
GF D T+N ++ + G L++ ++F M ++ D +Y+I++ L + G+ KA
Sbjct: 282 GFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKA 341
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+L + + E+ G +P + + L G E + ++++ G D ++
Sbjct: 342 VELLNHMRER-------GIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVA 394
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKML 184
Y +I G+ +E ++ M+ R +P+V Y+ +I GF K A L++M
Sbjct: 395 YTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEME 454
Query: 185 KSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDR 221
P + +++ L + G + +V M+++
Sbjct: 455 TKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 491
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 106/252 (42%), Gaps = 8/252 (3%)
Query: 7 FSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAE 66
+ P ++N ++H V++ M +D +Y+I++ + G ++
Sbjct: 248 YRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSDVFTYNIVMVAKYRLGKLNQLY 307
Query: 67 KLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPL-SY 125
+LF E+ G P +Y I L G+ KA +L + +RG + + +
Sbjct: 308 RLFHEMGGN-------GLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHF 360
Query: 126 MTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLK 185
T+I G R G ++ + M+R +PDV Y +I G++ + A + +KM+
Sbjct: 361 TTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMIS 420
Query: 186 SSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDK 245
+P T++S++ G E+ + M + N + + + L G +
Sbjct: 421 RGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSR 480
Query: 246 AFEIVELLYKKG 257
A +++ + +KG
Sbjct: 481 ARKVLRQMMEKG 492
>Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30062096-30061545 | 20130731
Length = 183
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD +N+LI C +G + ALK+ + M + + +Y+ ++ LC+R DKA L
Sbjct: 8 PDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHHLDKAITL 67
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQ-DPLSYMT 127
+L ++ G QP +Y + LC+ G+ A +V I+ +G D +Y
Sbjct: 68 LSKLKDQ-------GIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGYNLDVYAYAV 120
Query: 128 VIMGHCREGAYENGYELLIWM 148
+I G C G ++ +L M
Sbjct: 121 MIHGFCNNGLFDEALAMLSKM 141
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 151 RDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKTSTWHSILARLLEKGFPHE 210
++ +PDV Y+ LIDGF + K A++ +++M P T++SIL L ++ +
Sbjct: 4 KNIIPDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHHLDK 63
Query: 211 SARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIVELLYKKGFCVKIEE---VVQ 267
+ + + D+ I+ NI T I L G + A ++ E++ KG+ + + ++
Sbjct: 64 AITLLSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGYNLDVYAYAVMIH 123
Query: 268 FLCKRGKLPEARKLLL-FSLKNHHNVDIDLCNAVILGLCEINRVLEAFGLCYELVEKGL 325
C G EA +L + N+ N + +I L + N + +A L +E++ +GL
Sbjct: 124 GFCNNGLFDEALAMLSKMTTDNNCNPNAATNEIIICSLFDKNEIDKAKRLLHEMIVRGL 182
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 4 DGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYD 63
D G P+ T+ LI C G L++A KVFE + D +Y+++I C G +D
Sbjct: 73 DQGIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGYNLDVYAYAVMIHGFCNNGLFD 132
Query: 64 KAEKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG 118
+A + ++ P AA+ + I L + + KA+R+L +++ RG
Sbjct: 133 EALAMLSKMTTDN------NCNPNAATNEIIICSLFDKNEIDKAKRLLHEMIVRG 181
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 10 DTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLF 69
D ++ T+I+ + G LDEA +V+ M V A +A L+ L Q G D+A ++F
Sbjct: 296 DCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTA----LMSGLIQNGRIDEASQVF 351
Query: 70 DELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVI 129
+L +++ A + + C+ G+ +A + RQ+ ++ +S+ T+I
Sbjct: 352 SQLNKRD-----------AICWNSMIAGYCQSGRMSEALNLFRQM---PVKNAVSWNTMI 397
Query: 130 MGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYL 189
G+ + G + E+ M R+ + ++ LI GFLQ L A+++L M +
Sbjct: 398 SGYAQAGEMDRATEIFEAMGVRNVIS----WNSLITGFLQNGLYLDALKSLVLMGQEGKK 453
Query: 190 PKTST 194
P ST
Sbjct: 454 PDQST 458
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 147/345 (42%), Gaps = 40/345 (11%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKLFDEL 72
++NT+I + ++EA K+F+ M D+ S++++I ++G +KA +LF+ +
Sbjct: 81 SWNTMIAGYLHNNMVEEAHKLFDLM----AERDNFSWALMITCYTRKGMLEKARELFELV 136
Query: 73 FEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTVIMGH 132
+K C + + + G+ AE+V K +D +SY +++ G+
Sbjct: 137 PDKLDTAC----------WNAMIAGYAKKGRFDDAEKVFE---KMPVKDLVSYNSMLAGY 183
Query: 133 CREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSYLPKT 192
+ G + M R+ + ++ ++ GF+ A E EK+ P
Sbjct: 184 TQNGKMGLAMKFFERMAERNVVS----WNLMVAGFVNNCDLGSAWELFEKIPD----PNA 235
Query: 193 STWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFGHGHRDKAFEIV-E 251
+W ++L G E+ + + DR +N+ I D+A ++ E
Sbjct: 236 VSWVTMLCGFARHGKIVEARK----LFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKE 291
Query: 252 LLYKKGFCVKIEEVVQFLCKRGKLPEARKLLLFSLKNHHNVDIDLCNAVILGLCEINRVL 311
YK CV ++ + GKL EAR++ D+ A++ GL + R+
Sbjct: 292 TPYKD--CVSWTTMINGYVRVGKLDEAREV----YNQMPYKDVAAKTALMSGLIQNGRID 345
Query: 312 EAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAAFISKRIP 356
EA + +L ++ + C N ++ G++ EA + +++P
Sbjct: 346 EASQVFSQLNKR----DAICWNSMIAGYCQSGRMSEALNLFRQMP 386
>Medtr7g085100.1 | PPR containing plant-like protein | HC |
chr7:32903829-32906178 | 20130731
Length = 585
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 148/355 (41%), Gaps = 24/355 (6%)
Query: 3 GDGGFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDY 62
G+ +P T +I +C+ ++ A+ F K F + L+ LC+ +
Sbjct: 197 GESIVTPQTLLI--MIRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNV 254
Query: 63 DKAEKLFDELFEKEIVLCKFGSQPL-AASYKPIFQYLCEH-GKTRKAERVLRQIMKRGTQ 120
AE L + C PL S+ I C R AER+ ++ KR Q
Sbjct: 255 QDAEHL---------LFCNKNVFPLDTKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQ 305
Query: 121 -DPLSYMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMET 179
D +SY ++I + + +L M +R+ PD ++Y+ +I + A+
Sbjct: 306 HDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNL 365
Query: 180 LEKMLKSSYLPKTSTWHSILARLLEKGFPHESARVTVMMLDRNIRQNINLSTKSIELLFG 239
+ KM ++ P T++S++ L + E+ + +ML+R I +I +L
Sbjct: 366 IIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRIL-- 423
Query: 240 HGHRDKAFEIVELLYKKGFCVKIEEVVQFL---CKRGKLPEARKLLLFSLKNHHNVDIDL 296
+++ FE+++ + + G IE + + C+ +L E ++ +++ + D
Sbjct: 424 -RVKEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKR--IWNAMREDGIGHDR 480
Query: 297 CNAVIL--GLCEINRVLEAFGLCYELVEKGLHQELTCLNDLVTALEARGKVEEAA 349
+ ++L GL +V EA+ E+ EKG E + L L R + A
Sbjct: 481 SSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKTESMLQAWLSGRQVTDSQA 535
>Medtr2g078690.1 | PPR containing plant-like protein | HC |
chr2:32882427-32884704 | 20130731
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 10/194 (5%)
Query: 13 TFNTLIHSHCSAGNLDEALKVFENMKNFQVTA--DSASYSILIRNLCQRGDYDKAEKLFD 70
TF LI +A ++EA+ +F + F + DS ++ L+ +C+ ++AE LF
Sbjct: 25 TFYILIRRFVAAHKIEEAINIFYRREEFGLDNELDSEAFRTLLMWMCRYKHIEEAETLFH 84
Query: 71 ELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMK-RGTQDPLSYMTVI 129
L KFG ++ I C G T +A+R+ + I+ + D +Y T I
Sbjct: 85 R------NLNKFGFCRDIKTWNVILNGWCVLGNTHEAKRLWKDIIAYKCKPDIFTYATFI 138
Query: 130 MGHCREGAYENGYELLIWMLRRDFL-PDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSSY 188
++G +L M + + PDV I +C+IDG K + A++ M +
Sbjct: 139 KAMTKKGKLGTALKLFNRMWKEESCKPDVVICNCVIDGLGFKKRIPEALQVFHDMKEWGC 198
Query: 189 LPKTSTWHSILARL 202
LP +T++S++ L
Sbjct: 199 LPNVATYNSLIKHL 212
>Medtr4g072990.1 | PPR containing plant-like protein | HC |
chr4:27612939-27601069 | 20130731
Length = 1134
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 9/207 (4%)
Query: 9 PDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKAEKL 68
PD TF TL+ + AG ++ A +V++ ++ + + S Y+I I + Q GD++ A +
Sbjct: 651 PDHVTFGTLMKACAKAGQVERAREVYKMIQQYNIKGSSEVYTIAINSCSQTGDWEFARSV 710
Query: 69 FDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRGTQDPLSYMTV 128
+D++ +K ++ P + K A +L+Q K G Q + +
Sbjct: 711 YDDMTQKGVL-------PDEMFMSALIDVAGHAKKLEAAFDILQQARKEGVQIGIMTYSS 763
Query: 129 IMGHCREGA-YENGYELLIWMLRRDFLPDVEIYDCLIDGFLQKDKPLLAMETLEKMLKSS 187
+MG C + ++ EL ++ + V + L+ D+ A+E L +M
Sbjct: 764 LMGACSKAKNWQRALELYEYLKSLKLVQTVSTVNALLTALCDGDQFQKALEVLSEMKGLG 823
Query: 188 YLPKTSTWHSILARLLEKGFPHESARV 214
P + T+ SIL EK E+A++
Sbjct: 824 LCPNSITF-SILIVASEKKDDMEAAQM 849
>Medtr2g018820.1 | PPR containing plant-like protein | HC |
chr2:5993370-5991024 | 20130731
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 6 GFSPDTCTFNTLIHSHCSAGNLDEALKVFENMKNFQVTADSASYSILIRNLCQRGDYDKA 65
G PDT N +I ++ +DEA++VF M + A++ SYS + + LC++G ++
Sbjct: 199 GVIPDTFVLNMIIKAYAKCLEVDEAIRVFREMGLYNCEANAYSYSYIAKGLCEKGRVEQG 258
Query: 66 EKLFDELFEKEIVLCKFGSQPLAASYKPIFQYLCEHGKTRKAERVLRQIMKRG-TQDPLS 124
+ E+ K +V P ++Y I L + A V+ ++ + D L+
Sbjct: 259 FGFYKEMRVKCLV-------PSTSTYVIIVCSLALERRFEDAIEVMFDMLGNSRSPDCLT 311
Query: 125 YMTVIMGHCREGAYENGYELLIWMLRRDFLPDVEIYDCLID 165
Y TV+ G C EG + +ELL +RD + +Y L +
Sbjct: 312 YKTVLEGLCHEGRVDEAFELLDEFKKRDVGMNERMYKTLFN 352