Miyakogusa Predicted Gene
- Lj0g3v0347529.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0347529.2 tr|Q2HVD7|Q2HVD7_MEDTR Nucleic acid-binding,
OB-fold, subgroup OS=Medicago truncatula GN=MtrDRAFT_AC,40.6,1e-18,no
description,Nucleic acid-binding, OB-fold; seg,NULL; DUF223,Domain of
unknown function DUF223,CUFF.23853.2
(228 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g096680.1 | animal RPA1 domain protein | HC | chr8:4055821... 127 7e-30
Medtr1g036740.1 | animal RPA1 domain protein | HC | chr1:1349734... 127 7e-30
Medtr8g036090.1 | animal RPA1 domain protein | HC | chr8:1327908... 126 2e-29
Medtr4g471610.1 | animal RPA1 domain protein | HC | chr4:2707183... 126 2e-29
Medtr3g078440.1 | animal RPA1 domain protein | HC | chr3:3535014... 126 2e-29
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p... 124 1e-28
Medtr3g095950.1 | animal RPA1 domain protein | HC | chr3:4384560... 122 4e-28
Medtr3g116750.1 | animal RPA1 domain protein | HC | chr3:5461096... 120 1e-27
Medtr3g056270.1 | replication factor-A carboxy-terminal domain p... 118 4e-27
Medtr7g093810.1 | animal RPA1 domain protein | HC | chr7:3731542... 118 5e-27
Medtr3g056240.1 | DUF223 domain protein | HC | chr3:22396065-223... 118 5e-27
Medtr5g085220.1 | animal RPA1 domain protein | LC | chr5:3678902... 117 8e-27
Medtr8g479260.1 | replication factor-A carboxy-terminal domain p... 117 9e-27
Medtr2g008650.1 | replication factor-A carboxy-terminal domain p... 116 2e-26
Medtr2g054710.1 | animal RPA1 domain protein | LC | chr2:2336383... 115 5e-26
Medtr8g463820.1 | animal RPA1 domain protein | LC | chr8:2251463... 111 5e-25
Medtr8g088810.1 | DUF223 domain protein | LC | chr8:36895897-368... 110 8e-25
Medtr6g039240.1 | animal RPA1 domain protein | LC | chr6:1418076... 110 1e-24
Medtr1g094230.1 | animal RPA1 domain protein | LC | chr1:4243647... 109 2e-24
Medtr4g028320.1 | animal RPA1 domain protein | LC | chr4:9767872... 109 3e-24
Medtr7g089660.1 | animal RPA1 domain protein | LC | chr7:3511416... 106 2e-23
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p... 102 3e-22
Medtr5g055160.1 | animal RPA1 domain protein | LC | chr5:2272064... 100 8e-22
Medtr2g032570.1 | animal RPA1 domain protein | LC | chr2:1225599... 98 6e-21
Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268... 97 8e-21
Medtr7g117425.1 | animal RPA1 domain protein | LC | chr7:4855438... 96 2e-20
Medtr5g056060.1 | transmembrane protein, putative | HC | chr5:23... 96 3e-20
Medtr1788s0010.1 | animal RPA1 domain protein | LC | scaffold178... 96 3e-20
Medtr5g068430.1 | DUF223 domain protein | LC | chr5:28968884-289... 95 4e-20
Medtr7g104000.1 | animal RPA1 domain protein | HC | chr7:4204740... 95 6e-20
Medtr2g062200.1 | DUF223 domain protein | LC | chr2:26248587-262... 93 2e-19
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p... 87 1e-17
Medtr3g084550.1 | DUF223 domain protein | LC | chr3:38189762-381... 87 1e-17
Medtr4g022520.1 | DUF223 domain protein | HC | chr4:7510297-7517... 87 1e-17
Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944... 86 3e-17
Medtr1g072220.1 | DUF223 domain protein | LC | chr1:32050688-320... 85 4e-17
Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 | 20... 83 3e-16
Medtr8g062030.1 | replication factor-A carboxy-terminal domain p... 82 3e-16
Medtr1g075850.1 | replication factor-A carboxy-terminal domain p... 79 3e-15
Medtr8g461360.1 | DUF223 domain protein | LC | chr8:21582245-215... 78 6e-15
Medtr2g048550.1 | replication factor-A carboxy-terminal domain p... 77 1e-14
Medtr8g059025.1 | animal RPA1 domain protein | LC | chr8:2054987... 77 1e-14
Medtr5g060920.1 | DUF223 domain protein | LC | chr5:25336865-253... 75 5e-14
Medtr2g099880.1 | DUF223 domain protein | LC | chr2:42842228-428... 75 6e-14
Medtr8g467450.1 | animal RPA1 domain protein | LC | chr8:2424111... 75 7e-14
Medtr6g051890.1 | replication factor-A carboxy-terminal domain p... 74 1e-13
Medtr5g054640.1 | animal RPA1 domain protein | LC | chr5:2249625... 72 3e-13
Medtr1g091180.1 | animal RPA1 domain protein | LC | chr1:4140287... 72 4e-13
Medtr3g032190.1 | DUF223 domain protein | LC | chr3:10122022-101... 72 4e-13
Medtr5g032920.1 | PIF1 DNA helicase/replication A1-like protein,... 68 7e-12
Medtr6g039230.1 | PIF1 DNA helicase/replication A1-like protein,... 67 1e-11
Medtr1g085690.1 | DUF223 domain protein | HC | chr1:38294818-382... 67 2e-11
Medtr8g078450.1 | DUF223 domain protein | LC | chr8:33442410-334... 66 3e-11
Medtr4g036240.2 | replication factor-A carboxy-terminal domain p... 64 8e-11
Medtr5g007120.1 | transmembrane protein, putative | HC | chr5:12... 64 1e-10
Medtr3g067530.1 | DUF223 domain protein | LC | chr3:30107700-301... 60 2e-09
Medtr8g094870.1 | nucleic acid-binding,-like fold-protein | LC |... 60 2e-09
Medtr6g465570.1 | animal RPA1 domain protein | LC | chr6:2333006... 58 7e-09
Medtr7g113580.1 | animal RPA1 domain protein | LC | chr7:4680563... 58 7e-09
Medtr5g016290.1 | nucleic acid-binding,-like fold-protein | LC |... 58 8e-09
Medtr2g020010.1 | ATP synthase subunit beta | LC | chr2:6624678-... 56 3e-08
Medtr3g463070.1 | DUF223 domain protein | LC | chr3:25247995-252... 55 6e-08
Medtr8g469510.1 | PIF1 DNA helicase/replication A1-like protein,... 54 1e-07
Medtr5g045850.1 | DUF223 domain protein | HC | chr5:20106594-201... 54 1e-07
Medtr5g070620.1 | hypothetical protein | HC | chr5:29909066-2990... 54 2e-07
Medtr1g096860.1 | animal RPA1 domain protein | LC | chr1:4364240... 53 2e-07
Medtr1g056650.1 | DUF223 domain protein | LC | chr1:24776375-247... 52 4e-07
Medtr4g058660.1 | DUF223 domain protein | LC | chr4:21583173-215... 52 4e-07
Medtr7g451880.1 | DUF223 domain protein | LC | chr7:17695455-176... 52 4e-07
Medtr5g019960.1 | DUF223 domain protein | LC | chr5:7576443-7574... 52 6e-07
Medtr1g023370.1 | DUF223 domain protein | HC | chr1:7479056-7480... 52 6e-07
Medtr3g032330.1 | animal RPA1 domain protein | LC | chr3:1017564... 51 7e-07
Medtr5g030110.1 | DUF223 domain protein | HC | chr5:12653763-126... 51 8e-07
Medtr2g007410.1 | DUF223 domain protein | HC | chr2:977639-97608... 51 8e-07
Medtr7g024060.1 | DUF223 domain protein | HC | chr7:7887410-7888... 51 8e-07
Medtr6g087820.1 | DUF223 domain protein | HC | chr6:33047336-330... 51 8e-07
Medtr5g091480.1 | DUF223 domain protein | HC | chr5:39876643-398... 51 8e-07
Medtr5g081190.1 | DUF223 domain protein | HC | chr5:34759809-347... 51 8e-07
Medtr5g056290.1 | DUF223 domain protein | HC | chr5:23186815-231... 51 8e-07
Medtr3g031190.1 | DUF223 domain protein | HC | chr3:26946405-269... 51 8e-07
Medtr2g010570.1 | DUF223 domain protein | HC | chr2:2447911-2449... 51 8e-07
Medtr2g005490.1 | DUF223 domain protein | HC | chr2:182677-18423... 51 8e-07
Medtr1g082860.1 | DUF223 domain protein | HC | chr1:36868467-368... 51 1e-06
Medtr8g005940.1 | DUF223 domain protein | LC | chr8:407715-40616... 51 1e-06
Medtr1g087080.1 | DUF223 domain protein | LC | chr1:38983899-389... 50 1e-06
Medtr7g027115.1 | DUF223 domain protein | LC | chr7:9176826-9175... 50 1e-06
Medtr3g102720.1 | DUF223 domain protein | LC | chr3:47333755-473... 50 1e-06
Medtr1g110330.1 | DUF223 domain protein | LC | chr1:49788911-497... 50 1e-06
Medtr1g011490.1 | DUF223 domain protein | HC | chr1:2049055-2047... 50 2e-06
Medtr1g073290.1 | DUF223 domain protein | LC | chr1:28644982-286... 50 2e-06
Medtr2g015610.1 | transmembrane protein, putative | LC | chr2:46... 49 3e-06
Medtr4g070090.1 | replication factor-A-like protein | HC | chr4:... 49 4e-06
Medtr3g015660.1 | nucleic acid-binding,-like fold-protein | HC |... 49 5e-06
Medtr8g446640.1 | DUF223 domain protein | HC | chr8:18267497-182... 48 6e-06
Medtr1g105785.1 | replication factor-A carboxy-terminal domain p... 48 6e-06
Medtr2g450060.1 | replication factor-A carboxy-terminal domain p... 48 7e-06
Medtr2g010270.1 | animal RPA1 domain protein | LC | chr2:2299423... 48 7e-06
>Medtr8g096680.1 | animal RPA1 domain protein | HC |
chr8:40558216-40559002 | 20130731
Length = 172
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 102/165 (61%), Gaps = 3/165 (1%)
Query: 3 DDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYR 59
D +++S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR LIY+
Sbjct: 6 DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65
Query: 60 FERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPL 119
F+ L+EG V+ I++F+V+ N+G + ++E+K+NF +N +VK + Y+F P
Sbjct: 66 FKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPA 125
Query: 120 SXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG + GVG ER +++ VKTKMN IE++S
Sbjct: 126 PDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIELDS 170
>Medtr1g036740.1 | animal RPA1 domain protein | HC |
chr1:13497342-13498128 | 20130731
Length = 172
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 102/165 (61%), Gaps = 3/165 (1%)
Query: 3 DDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYR 59
D +++S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR LIY+
Sbjct: 6 DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65
Query: 60 FERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPL 119
F+ L+EG V+ I++F+V+ N+G + ++E+K+NF +N +VK + Y+F P
Sbjct: 66 FKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPA 125
Query: 120 SXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG + GVG ER +++ VKTKMN IE++S
Sbjct: 126 PDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIELDS 170
>Medtr8g036090.1 | animal RPA1 domain protein | HC |
chr8:13279086-13278300 | 20130731
Length = 172
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKE 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N+G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG + GVG ER +++ VKTKMN IE++S
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIELDS 170
>Medtr4g471610.1 | animal RPA1 domain protein | HC |
chr4:27071837-27072623 | 20130731
Length = 172
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKE 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N+G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG + GVG ER +++ VKTKMN IE++S
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIELDS 170
>Medtr3g078440.1 | animal RPA1 domain protein | HC |
chr3:35350146-35349360 | 20130731
Length = 172
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKE 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N+G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG + GVG ER +++ VKTKMN IE++S
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIELDS 170
>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830642-11833873 | 20130731
Length = 560
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 102/181 (56%), Gaps = 3/181 (1%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDN---KIHATIREGLIY 58
F+ + IS +K W I +V+R WK + L F++E+VLMD+ +IHA+I++ L+Y
Sbjct: 5 FEPISQISSSKPAWNIKARVVRLWKVSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLLY 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F+ ++EG VY+ N V+ N G + T + +K+NFQ + P+ A ++ + FVP
Sbjct: 65 KFQSEIREGKVYSFENMGVAANGGSYKTTHYPYKLNFQFGTKCLPLCGALVSGSDFKFVP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSFI 178
+S VIG LTGVGTER ++ TK+N I +E++ Y + +++
Sbjct: 125 ISDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYV 184
Query: 179 D 179
D
Sbjct: 185 D 185
>Medtr3g095950.1 | animal RPA1 domain protein | HC |
chr3:43845609-43846394 | 20130731
Length = 172
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F++E+VL+D K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKN 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG + GVG E+ +++ VKTKMN IE++S
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIELDS 170
>Medtr3g116750.1 | animal RPA1 domain protein | HC |
chr3:54610965-54611750 | 20130731
Length = 172
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 98/162 (60%), Gaps = 3/162 (1%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V RAW GQ +KL F++E+VL+D K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVARAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKN 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG + GVG E+ +++ VKTKMN IE++S
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIELDS 170
>Medtr3g056270.1 | replication factor-A carboxy-terminal domain
protein | HC | chr3:22409504-22413525 | 20130731
Length = 719
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 3/181 (1%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDN---KIHATIREGLIY 58
F+ + IS +K I +V+R WK + L F++E+VLMD+ +IHA+I++ L Y
Sbjct: 5 FEPISQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLWY 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F+ ++EG VY+ N V+ N G + T H +K+NFQ + P+ A ++ + FVP
Sbjct: 65 KFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTKCLPLFGALVSGSDFKFVP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSFI 178
+S VIG LTGVGTER ++ TK+N I +E++ Y + +++
Sbjct: 125 ISDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYV 184
Query: 179 D 179
D
Sbjct: 185 D 185
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%)
Query: 46 NKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMN 105
+KIHA+I++ L Y+F+ ++EG VY+ N V+ N G + T H +K+N Q + P+
Sbjct: 211 SKIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNVQFGTKCLPLC 270
Query: 106 KASITIETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESE 165
A ++ + FVP+ VIG LTGVGTER ++ TK+N I +E++
Sbjct: 271 GALVSGSDFKFVPIFDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEAD 330
Query: 166 WYFVDYDFLHSFID 179
Y + +++D
Sbjct: 331 GYKLQCTLFGTYVD 344
>Medtr7g093810.1 | animal RPA1 domain protein | HC |
chr7:37315424-37314639 | 20130731
Length = 172
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 98/162 (60%), Gaps = 3/162 (1%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F++E+VL+D K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKN 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+E V+ I++F V+ N G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQERMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG + GVG E+ +++ VKTKMN IE++S
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIELDS 170
>Medtr3g056240.1 | DUF223 domain protein | HC |
chr3:22396065-22393475 | 20130731
Length = 323
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 3/181 (1%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDN---KIHATIREGLIY 58
F+ + IS +K I +V+R WK + L F++E+VLMD+ +IHA+I++ L Y
Sbjct: 5 FEPISQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLWY 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F+ ++EG VY+ N V+ N G + T H +K+NFQ + P+ A ++ + FVP
Sbjct: 65 KFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTKCLPLCGALVSGSDFKFVP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSFI 178
+S VIG LTGVGTER ++ TK+N I +E++ Y + +++
Sbjct: 125 ISDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYV 184
Query: 179 D 179
D
Sbjct: 185 D 185
>Medtr5g085220.1 | animal RPA1 domain protein | LC |
chr5:36789021-36788235 | 20130731
Length = 172
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+ AW G+ +KL+F++++VL+D K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVPAWFGKDYKNKKLSFSMDLVLIDRKGDRIGASIRRILIYKFKE 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N+G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFIVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG + GVG ER +++ VKTKMN IE++S
Sbjct: 129 FNESYDNNCLVDVIGVMIGVGVEREYERDSVKTKMNVIELDS 170
>Medtr8g479260.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:33777150-33779789 | 20130731
Length = 555
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 105/182 (57%), Gaps = 6/182 (3%)
Query: 4 DFASISR---AKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLI 57
DF++IS K W + K+IR W+ +G ++ F++E+V++D ++IHA++++ LI
Sbjct: 6 DFSAISEICTEKTFWNLKGKIIRLWQVSDFNGNRMPFSIEMVILDEAGDRIHASLKKTLI 65
Query: 58 YRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFV 117
Y+F L EG ++ N V+ N G + T KH +K+NFQ++ +VK + +IT Y V
Sbjct: 66 YKFRNDLFEGKCFSFENMGVANNGGGYRTTKHTYKLNFQLSSKVKYLPALTITKSPYQLV 125
Query: 118 PLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSF 177
P+S +IG LTGVG+ER +++ TK+N IE+E+ + + S+
Sbjct: 126 PISEVIGGTYDTDYLVDIIGVLTGVGSERELERNGNMTKLNVIELEAGGFKIQCTLFGSY 185
Query: 178 ID 179
+D
Sbjct: 186 VD 187
>Medtr2g008650.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:1569207-1566568 | 20130731
Length = 555
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 104/182 (57%), Gaps = 6/182 (3%)
Query: 4 DFASISR---AKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLI 57
DF++IS K W + K+IR W+ +G ++ F++E+V++D ++IHA++++ LI
Sbjct: 6 DFSAISEICTEKTFWNLKGKIIRLWQVSDFNGNRMPFSIEMVILDEAGDRIHASLKKTLI 65
Query: 58 YRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFV 117
Y+F L EG ++ N V+ N G + T KH +K+NFQ + +VK + +IT Y V
Sbjct: 66 YKFRNDLFEGKCFSFENMGVANNGGGYRTTKHTYKLNFQFSSKVKYLPALTITKSPYQLV 125
Query: 118 PLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSF 177
P+S +IG LTGVG+ER +++ TK+N IE+E+ + + S+
Sbjct: 126 PISEVIGGTYDTDYLVDIIGVLTGVGSERELERNGNMTKLNVIELEAGGFKIQCTLFGSY 185
Query: 178 ID 179
+D
Sbjct: 186 VD 187
>Medtr2g054710.1 | animal RPA1 domain protein | LC |
chr2:23363838-23365033 | 20130731
Length = 271
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 103/182 (56%), Gaps = 6/182 (3%)
Query: 4 DFASISR---AKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLI 57
DF++IS K W + K+IR W+ +G + F++E+V++D ++IHA++++ LI
Sbjct: 6 DFSAISEICTEKTFWNLKGKIIRLWQVSDFNGNMMPFSIEMVILDEAGDRIHASLKKTLI 65
Query: 58 YRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFV 117
Y+F L EG ++ N V+ N G + T KH +K+NFQ + +VK + +IT Y V
Sbjct: 66 YKFRNDLFEGKCFSFENMGVTNNGGGYRTTKHTYKLNFQFSSKVKYLPALTITKSPYQLV 125
Query: 118 PLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSF 177
P+S +IG LTGVG+ER ++ TK+N IE+E+ + + F S+
Sbjct: 126 PISEFIGGTYDTDYLVDIIGVLTGVGSERERERNGNMTKLNVIELEAGGFKIQCTFFGSY 185
Query: 178 ID 179
+D
Sbjct: 186 VD 187
>Medtr8g463820.1 | animal RPA1 domain protein | LC |
chr8:22514633-22516142 | 20130731
Length = 283
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 3 DDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYR 59
D +++S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR LIY+
Sbjct: 6 DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65
Query: 60 FERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPL 119
F+ L+EG V+ I++F+V+ N+G + ++E+K+NF +N +VK + Y+F P
Sbjct: 66 FKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPA 125
Query: 120 SXXXXXXXXXXXXXXVIGFLTGVGTERVIDKE 151
VIG + GVG ER +++
Sbjct: 126 PDVFNESYDNNYLVDVIGVMIGVGVEREYERD 157
>Medtr8g088810.1 | DUF223 domain protein | LC |
chr8:36895897-36893498 | 20130731
Length = 306
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 111/199 (55%), Gaps = 8/199 (4%)
Query: 3 DDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYR 59
D +++S K++W ++V+V+RAW GQ +KL F++E VL+D K I A+IR LIY+
Sbjct: 6 DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLIDRKGDQIGASIRRTLIYK 65
Query: 60 FERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPL 119
F+ L+EG V+ I++F+V+ N+G + +E+K+NF +N +VK + I Y+F P
Sbjct: 66 FKEQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKVKLSKTILVPINVYSFTPA 125
Query: 120 SXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSFID 179
VIG + GVG ER ++E KTKMN IE++S Y +++
Sbjct: 126 PDVFNESYDNNYLVDVIGVIIGVGVEREYEREGTKTKMNVIELDSNGYRFKCTLFGEYVE 185
Query: 180 LKSTIPCNNLFCKNMSYNV 198
N+L + S NV
Sbjct: 186 -----ELNSLLSSDESQNV 199
>Medtr6g039240.1 | animal RPA1 domain protein | LC |
chr6:14180761-14182238 | 20130731
Length = 289
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 3/149 (2%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKE 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N+G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKE 151
VIG + GVG ER +++
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEREYERD 157
>Medtr1g094230.1 | animal RPA1 domain protein | LC |
chr1:42436471-42437983 | 20130731
Length = 303
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 3/149 (2%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKE 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N+G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKE 151
VIG + GVG ER +++
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEREYERD 157
>Medtr4g028320.1 | animal RPA1 domain protein | LC |
chr4:9767872-9767142 | 20130731
Length = 153
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
Query: 17 ILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAIT 73
++V+V+RAW Q +KL+F++E+VLMD K I A+IR LIY+ + L+EG V+ I+
Sbjct: 1 MVVRVVRAWFVQDYKNKKLSFSMELVLMDRKGDRIGASIRRTLIYKSKEQLQEGMVFTIS 60
Query: 74 NFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXXXXXXXXXXXXX 133
+F+V+ N+G + ++E+K+NF +N +VK + Y+F
Sbjct: 61 SFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTSAYDVFNESYDNNFLV 120
Query: 134 XVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
VIG +TGVG ER +++ VKTKMN IE++S
Sbjct: 121 DVIGVMTGVGVEREYERDGVKTKMNVIELDS 151
>Medtr7g089660.1 | animal RPA1 domain protein | LC |
chr7:35114160-35121568 | 20130731
Length = 236
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F++E+VL+D K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQNYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKN 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N G + ++E+K+NF +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPNV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKE 151
VIG + GVG E+ +++
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEKEYERD 157
>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21416239-21412307 | 20130731
Length = 549
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
D + IS +KE W I V+V+R W + + +L ++LE+VLMDNK I+A++R LIY
Sbjct: 5 IDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRRTLIY 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
++E+ L+E V++I NF V+ N G + T +H +KINFQ ++K + + + Y
Sbjct: 65 KYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQCDDKFVPADIYVIGD 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSFI 178
V+G L VG E+ + ++KM IE++ + + ++
Sbjct: 125 SREIFQSEYDTDYLIDVMGMLKAVGVEKSYTRNGSQSKMIPIELDYDGFRFKVTLFGPYV 184
Query: 179 D 179
D
Sbjct: 185 D 185
>Medtr5g055160.1 | animal RPA1 domain protein | LC |
chr5:22720640-22718177 | 20130731
Length = 270
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 3/149 (2%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F +E+VLM+ K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFFMELVLMNRKGDRIGASIRRTLIYKFKE 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXX 122
L+EG V+ I++F V+ N G + +E+K++F +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNNGSYRPSCNEYKLDFTINTKVKLSKTVLVPTNVYSFTPAPHV 128
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKE 151
VIG + GVG ER +++
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVEREYERD 157
>Medtr2g032570.1 | animal RPA1 domain protein | LC |
chr2:12255994-12255202 | 20130731
Length = 174
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 95/164 (57%), Gaps = 5/164 (3%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F +E+VLM+ K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFFMELVLMNRKGDRIGASIRRTLIYKFKE 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSX- 121
L+EG V+ I++F V+ N+G + +E+K++F +N +VK + Y+F P
Sbjct: 69 QLQEGMVFTISSFNVASNSGSYRPSCNEYKLDFTINTKVKLSKTVLVPTNVYSFTPAPHV 128
Query: 122 -XXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
+ GVG ER +++ VKTKMN IE++S
Sbjct: 129 FNESYDNNYLVDVIGVMIGVGVGVEREYERDGVKTKMNVIELDS 172
>Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268124
| 20130731
Length = 272
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 4/150 (2%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNKIHATIREGLIYRFERVLK 65
+++S K++W ++VKV+RAW GQ +KL F++E + ++I A+IR LIY+F+ L+
Sbjct: 9 SNVSPRKQSWTLVVKVVRAWFGQDYKNKKLPFSME---LGDQIGASIRRTLIYKFKNQLQ 65
Query: 66 EGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXXXXX 125
EG V+ I++F V+ N+ + + E+K+NF +N +VK + Y+F P
Sbjct: 66 EGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKLSITVLVPTNVYSFTPAPDVFNE 125
Query: 126 XXXXXXXXXVIGFLTGVGTERVIDK-EYVK 154
VIG + GVG ER ++ EYV+
Sbjct: 126 FYDNNYLVDVIGVMIGVGVEREYERDEYVE 155
>Medtr7g117425.1 | animal RPA1 domain protein | LC |
chr7:48554380-48555674 | 20130731
Length = 258
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 3 DDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNKIHATIREGLIYRFER 62
D+ + IS KE+W I+V+++ AW + ++ F+L+ M NKIHAT+R LIY+FE+
Sbjct: 6 DNISEISPVKESWSIVVRIVCAWFVRDVNRDAHPFSLD---MGNKIHATVRRTLIYKFEK 62
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETY 114
L+EG VY+++ F V+ N G + T KHE+K+NFQ N +VK K + + Y
Sbjct: 63 DLQEGKVYSMSCFGVAANLGSYRTTKHEYKLNFQFNTKVKLCGKNGVPSDIY 114
>Medtr5g056060.1 | transmembrane protein, putative | HC |
chr5:23106867-23105553 | 20130731
Length = 251
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 7 SISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNKIHATIREGLIYRFERVLKE 66
++S K++W ++VKV+RAW GQ +KL F++E + ++I A+IR LIY+F+ L+E
Sbjct: 10 NVSPRKQSWTLVVKVVRAWFGQDYKNKKLPFSME---LGDQIGASIRRTLIYKFKNQLQE 66
Query: 67 GHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXXXXXX 126
G V+ I++F V+ N+ + + E+K+NF +N +VK + Y+F P
Sbjct: 67 GMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKLSITILVPTNVYSFTPAPDVFNEF 126
Query: 127 XXXXXXXXVIGFLTGVGTERVIDKE 151
VIG + GVG ER +++
Sbjct: 127 YDNNYLVDVIGVMIGVGVEREYERD 151
>Medtr1788s0010.1 | animal RPA1 domain protein | LC |
scaffold1788:754-253 | 20130731
Length = 139
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Query: 1 MFDDFAS-ISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGL 56
M DF S +S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR L
Sbjct: 3 MKHDFNSNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTL 62
Query: 57 IYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTF 116
IY+ + L+EG V+ I++F+V+ N+G + ++E+K+NF +N +VK + Y+F
Sbjct: 63 IYKSKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122
>Medtr5g068430.1 | DUF223 domain protein | LC |
chr5:28968884-28968008 | 20130731
Length = 195
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 4/141 (2%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNKIHATIREGLIYRFERVLK 65
+++S K++W ++VKV+RAW GQ +KL F++EV+ K A+IR LIY+F+ L+
Sbjct: 9 SNVSPRKQSWTLVVKVVRAWFGQDYKNKKLPFSMEVI----KFGASIRRTLIYKFKNQLQ 64
Query: 66 EGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXXXXX 125
EG ++ I++F V+ N+ + E+K+NF +N +VK + Y+F P
Sbjct: 65 EGMMFTISSFNVASNSDLYRPSHKEYKLNFTINTKVKLSITVLVPTNVYSFTPAPDVFNE 124
Query: 126 XXXXXXXXXVIGFLTGVGTER 146
VIG + GVG ER
Sbjct: 125 FYDNNYLVDVIGVMIGVGVER 145
>Medtr7g104000.1 | animal RPA1 domain protein | HC |
chr7:42047405-42048721 | 20130731
Length = 242
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNKIHATIREGLIYRFERVLK 65
+++S K++W ++VKV+RAW GQ +KL F++E + ++I A+IR LIY+F+ L+
Sbjct: 9 SNVSPRKQSWTLVVKVVRAWFGQDYKNKKLPFSME---LGDQIGASIRRTLIYKFKNQLQ 65
Query: 66 EGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXXXXX 125
EG V+ I++F V+ N + + E+K+NF +N +VK + Y+F P
Sbjct: 66 EGMVFTISSFNVASNNDLYRPSRKEYKLNFTINTKVKLSITVLVPTNVYSFTPALDVFNE 125
Query: 126 XXXXXXXXXVIGFLTGVGTERVIDKE 151
VIG + GVG ER +++
Sbjct: 126 FYDNNYLVDVIGVMIGVGVEREYERD 151
>Medtr2g062200.1 | DUF223 domain protein | LC |
chr2:26248587-26247742 | 20130731
Length = 185
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 41 VVLMD---NKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQM 97
+VLMD NKIHAT+R LIY+FE+ L+EG VY+++ F V+ N G + T KHE+K+NFQ
Sbjct: 1 MVLMDASGNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAANLGSYRTTKHEYKLNFQF 60
Query: 98 NIEVKPMNKASITIETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKM 157
N +VK K S+ + Y V+G LTGVG +R ++ KTKM
Sbjct: 61 NTKVKLCGKNSVPDDIYPISNSIVVFNSEYDTDYLVDVMGMLTGVGMQREYERNGAKTKM 120
Query: 158 NTIEIESEWY 167
+++ + +
Sbjct: 121 VAMKLNYDGF 130
>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:33436158-33438920 | 20130731
Length = 517
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 11/186 (5%)
Query: 1 MFDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLI 57
+F + I+ ++ W+I V+V+R W+ +LE+VL+D KIHA++R+ L
Sbjct: 4 LFHSVSEIALGEDGWKIKVRVLRLWEVPSFLKPDQTNSLEMVLIDEMGTKIHASVRKQLF 63
Query: 58 YRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFV 117
Y F+ L EG VY ++ F V+ + G + T H +KI FQM +V+ ASI +
Sbjct: 64 YVFQSKLSEGKVYEMSCFSVAPSVGSYRTTLHPYKIVFQMTTKVQACEGASIPSLGISLC 123
Query: 118 PLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVK----TKMNTIEIESEWYFVDYDF 173
++ V+GF+TG+ ER EYV+ TKM EI +
Sbjct: 124 KIADVCQHTSDHDYLVDVLGFMTGISVER----EYVRDGKVTKMVIFEITDASGKCECAL 179
Query: 174 LHSFID 179
++D
Sbjct: 180 FGQYVD 185
>Medtr3g084550.1 | DUF223 domain protein | LC |
chr3:38189762-38189098 | 20130731
Length = 131
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 39 LEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINF 95
+E+VLMD K I +IR LIY+F+ L+EG V+ I++ +V+ N+G + ++E+K+NF
Sbjct: 1 MELVLMDRKGDRIGVSIRRTLIYKFKEQLQEGMVFTISSSDVASNSGLYRPSRNEYKLNF 60
Query: 96 QMNIEVKPMNKASITIETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKT 155
+N +VK + Y+F P VIG + GVG ER + + VKT
Sbjct: 61 TINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYETDGVKT 120
Query: 156 KMNTIEIES 164
KMN IE++S
Sbjct: 121 KMNVIELDS 129
>Medtr4g022520.1 | DUF223 domain protein | HC | chr4:7510297-7517059
| 20130731
Length = 206
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%)
Query: 46 NKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMN 105
++I A+ R LIY+ + L+EG V+ I++F+V+ N+G + ++E+K+NF +N +VK
Sbjct: 12 DRIGASTRRTLIYKSKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSK 71
Query: 106 KASITIETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIES 164
+ Y+F P S VIG +TGVG ER + + VKTKMN IE++S
Sbjct: 72 TVLVPTNVYSFTPASDVFNESYDNNFLVDVIGVMTGVGVEREYESDGVKTKMNVIELDS 130
>Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944777
| 20130731
Length = 163
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%)
Query: 38 TLEVVLMDNKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQM 97
T + + ++I A+IR LIY+F+ L+EG V+ I++F V+ N G + ++E+K+NF +
Sbjct: 35 TSKRIKQGDRIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTI 94
Query: 98 NIEVKPMNKASITIETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKM 157
N +VK + Y+F P VIG + GVG E+ +++ VKTKM
Sbjct: 95 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKM 154
Query: 158 NTIEIES 164
N IE++S
Sbjct: 155 NVIELDS 161
>Medtr1g072220.1 | DUF223 domain protein | LC |
chr1:32050688-32051353 | 20130731
Length = 131
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 39 LEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINF 95
+E+VLMD K I +IR LIY+F+ L+EG V+ I++ +V+ N+ + ++E+K+NF
Sbjct: 1 MELVLMDRKGDRIGVSIRRTLIYKFKEQLQEGMVFTISSSDVASNSDLYRPSRNEYKLNF 60
Query: 96 QMNIEVKPMNKASITIETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKT 155
+N +VK + Y+F P VIG + GVG ER +++ VKT
Sbjct: 61 TINTKVKLSKTVLVPTNVYSFTPAPDIFNESYDNNYLVDVIGVMIGVGVEREYERDGVKT 120
Query: 156 KMNTIEIES 164
KMN IE++S
Sbjct: 121 KMNVIELDS 129
>Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 |
20130731
Length = 665
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 9 SRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDN---KIHATIREGLIYRFERVLK 65
R + WR +V+VIR W+ L ++E+VL+D KIHATI + L+Y F+ L
Sbjct: 14 GRNADAWRFVVRVIRLWE------VPLFTSIEMVLIDQNGVKIHATIPKQLMYLFQHKLI 67
Query: 66 EGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITI---ETYTFVPLSXX 122
EG VY ++NF V N+G + T H +K+ FQM +V+ + I++ T +S
Sbjct: 68 EGKVYKLSNFTVLLNSGAYRTTHHTYKLIFQMKTKVEESHDYEISLIPNHGLTLTDISQI 127
Query: 123 XXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEI 162
VIG +TG+ ER ++ TK+ IE+
Sbjct: 128 TSRTQDYEYLVDVIGLMTGISAEREFVRDGKLTKILVIEL 167
>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:25901653-25904109 | 20130731
Length = 575
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 15 WRILVKVIRAWKGQRLSGRKLAFTLEVVLMDN---KIHATIREGLIYRFERVLKEGHVYA 71
WRI V+V+R W+ A +LE+VL+D KI A +R+ LIY F++ L+EG VY
Sbjct: 18 WRIRVRVVRMWEVPTFLKPNQANSLEMVLLDQMGVKIQAIVRKQLIYVFQKRLREGEVYN 77
Query: 72 ITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXXXXXXXXXXX 131
I+ F V+ + G + H +KI FQM +V+ A+I + +F +
Sbjct: 78 ISYFSVAPSTGSYRAATHPYKIVFQMTTKVQSCTSATIPLYGLSFTSIVDVSNHTVEYDY 137
Query: 132 XXXVIGFLTGVGTERVIDKEYVKTKMNTIEI 162
V+G +T V ER ++ TKM E+
Sbjct: 138 LVDVMGLVTAVSEEREYVRDGSVTKMIIFEV 168
>Medtr1g075850.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:33615520-33612872 | 20130731
Length = 528
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNKIHATIREGLIYRFE 61
F + I+ K+ W+I V+V+R W+ ++E M KIHA +R+ L+Y F+
Sbjct: 5 FHSVSEIATGKDGWKIKVRVLRLWEVPAFLNPDQTNSVE---MGTKIHAGVRKQLLYVFQ 61
Query: 62 RVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSX 121
L EG VY ++ F V+ + G + T H +KI FQM +V+ ASI + +
Sbjct: 62 SKLSEGKVYQMSCFSVAPSVGSYRTTSHPYKIVFQMTTKVQVCEDASIPSFGISLCKIVD 121
Query: 122 XXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVK----TKMNTIEI 162
V+GF+T + ER EYV+ TKM EI
Sbjct: 122 VCQHTSDHDYLVDVLGFMTDISAER----EYVRDGKVTKMVVFEI 162
>Medtr8g461360.1 | DUF223 domain protein | LC |
chr8:21582245-21584205 | 20130731
Length = 222
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%)
Query: 52 IREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITI 111
+R LIY+FE+ EG VY+++NF V+ N G + T KHE+K+NFQ N +VK +K +
Sbjct: 1 MRRTLIYKFEKDPHEGKVYSMSNFGVAVNLGSYRTTKHEYKLNFQFNTKVKLCDKNGVPS 60
Query: 112 ETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWY 167
+ Y L V+ LTGVG +R ++ KTKM +E++ + +
Sbjct: 61 DIYLIANLIDVFNSEYDTDYLVNVMSMLTGVGMQREYERNGAKTKMVAMELDYDGF 116
>Medtr2g048550.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21410361-21406613 | 20130731
Length = 495
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDN---KIHATIREGLIY 58
++ ++IS + ++V+V+R W + + ++E+VLMD+ KIHA++ L +
Sbjct: 5 YNTVSTISVHDTSLILVVRVVRLWFDAEVIQDDTSQSMEMVLMDSYGEKIHASVHSSLYW 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F ++KE ++Y ++N +V N G T H + + FQMN VK A + E Y F
Sbjct: 65 KFHDLIKENNIYIVSNVKVDRNVGIMRTTPHPYVLLFQMNTRVKKAYFADVGPEFYRFND 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSFI 178
VIG LT V +++ + K+ IE+ E F+ +F+
Sbjct: 125 PQMYFDTAYDRDCLGDVIGMLTDVRVKKIDAEGAACDKLAIIEMNHEGCFIQCSLFGTFV 184
Query: 179 D 179
D
Sbjct: 185 D 185
>Medtr8g059025.1 | animal RPA1 domain protein | LC |
chr8:20549873-20550376 | 20130731
Length = 138
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
FD + I ++ WRI V+++R W+ L +LE+VL+D+K IHA++R+ L+Y
Sbjct: 5 FDSLSEIVPDRDGWRIKVRILRLWEVPTLLRPDQTNSLEMVLIDDKGAKIHASVRKQLLY 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETY 114
F+ L EG VY ++ F V+ + G + T H +K+ FQM +V+ S+ I TY
Sbjct: 65 VFQPKLSEGKVYKMSFFSVAPSVGSYRTTLHPYKLVFQMKTKVQ--VSESVLIPTY 118
>Medtr5g060920.1 | DUF223 domain protein | LC |
chr5:25336865-25337277 | 20130731
Length = 109
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
Query: 4 DFAS-ISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYR 59
DF S +S K++W ++V+V+RAW GQ +KL F++E VLMD K I A+IR LIY+
Sbjct: 8 DFISDVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLMDQKGDQIGASIRRTLIYK 67
Query: 60 FERVLKEGHVYAITNFEVS 78
F++ L+EG V+ I++F+V+
Sbjct: 68 FKKQLQEGMVFTISSFDVA 86
>Medtr2g099880.1 | DUF223 domain protein | LC |
chr2:42842228-42841554 | 20130731
Length = 137
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 39 LEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINF 95
+E+V+MD K I A+IR L+Y+F+ L+EG V+ I++ V N+G + +E+K+NF
Sbjct: 7 MELVIMDRKGDRIVASIRRTLVYKFKEQLQEGMVFTISSSNVVSNSGSYRPSHNEYKLNF 66
Query: 96 QMNIEVKPMNKASITIETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKT 155
+N +VK + Y+F P VIG + GVG ER +++ VKT
Sbjct: 67 TINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKT 126
Query: 156 KMNTIEIES 164
KMN IE++S
Sbjct: 127 KMNVIELDS 135
>Medtr8g467450.1 | animal RPA1 domain protein | LC |
chr8:24241111-24240561 | 20130731
Length = 142
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLIY 58
FD A++ +E WR VK++R W+ +LE+VL+D +KIHAT+R+ L+Y
Sbjct: 5 FDSLAAVVPWREGWRFKVKILRMWEVPAFLNLDQPNSLEMVLIDEKGDKIHATVRKQLLY 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASI 109
F++ L E Y + F ++ N G + T EFK+ FQM +V+ + ++I
Sbjct: 65 VFQKKLAEEDAYKMFYFSIAPNVGYYHTTTQEFKLIFQMKTKVQKIESSAI 115
>Medtr6g051890.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:18071124-18068908 | 20130731
Length = 399
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
FD + +E WRI ++ R W ++E+VL+D+K IH T+R+ L+Y
Sbjct: 9 FDALCHVLLGREAWRIEMRTARLWTIHTFVKPDQINSVEMVLIDDKGGKIHVTVRKQLLY 68
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
F+ +L +G VY I F V+ + G + + H KI FQMN +V + I+ TF
Sbjct: 69 LFQHLLVKGKVYKIAYFSVAPSVGSYRSTLHPHKIVFQMNTKVLECENSLISPCGLTFSN 128
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERV 147
+S V+G +T + ER+
Sbjct: 129 ISKICSHTDEYDYLFDVMGVMTDISVERI 157
>Medtr5g054640.1 | animal RPA1 domain protein | LC |
chr5:22496256-22495645 | 20130731
Length = 140
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 21 VIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLIYRFERVLKEGHVYAITNFEV 77
V+RAW Q KL+F++E+VLMD ++I IR LIY+F+ L+EG V+ IT+F+
Sbjct: 2 VVRAWFVQDYKNEKLSFSMELVLMDRMGDRICVFIRITLIYKFKEQLQEGMVFTITSFDF 61
Query: 78 SFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTF 116
+ N+G + + +K+NF +N ++K + + Y+F
Sbjct: 62 ACNSGLYRPSHNRYKLNFTINTKIKIFKSSLVPTNMYSF 100
>Medtr1g091180.1 | animal RPA1 domain protein | LC |
chr1:41402873-41402457 | 20130731
Length = 116
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 21 VIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEV 77
V+RAW Q KL F++E+VL D K I A IR LIY+F L+EG V+ IT+F+
Sbjct: 2 VVRAWFVQDYKNEKLLFSMELVLTDQKGDRIGAFIRRTLIYKFNEQLQEGMVFTITSFDF 61
Query: 78 SFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTF 116
N+G + +E+K+NF +N ++K + + Y+F
Sbjct: 62 VCNSGLYRPSHNEYKLNFTINTKIKIFKSSLVPTNMYSF 100
>Medtr3g032190.1 | DUF223 domain protein | LC |
chr3:10122022-10121616 | 20130731
Length = 107
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Query: 4 DFAS-ISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYR 59
DF S +S K++W ++V+V+RAW GQ +KL F++E VL+D K I A+IR LIY+
Sbjct: 6 DFISDVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLIDQKGDQIGASIRRTLIYK 65
Query: 60 FERVLKEGHVYAITNFEVS 78
F+ L+EG V+ I++F+V+
Sbjct: 66 FKEQLQEGMVFTISSFDVA 84
>Medtr5g032920.1 | PIF1 DNA helicase/replication A1-like protein,
putative | LC | chr5:14188599-14189420 | 20130731
Length = 96
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 3 DDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYR 59
D + IS +KE I+V+V+R W + + + F+LE+VLMDNK I+A++R LIY+
Sbjct: 6 DLISDISPSKENRTIIVRVVRLWFVRDIKKDQFPFSLEMVLMDNKGDRINASVRRTLIYK 65
Query: 60 FERVLKEGHVYAITNFEVSFNAGPFMTDKH 89
+E+ L E V +I NF + N G + T +H
Sbjct: 66 YEKELSEDRVISIGNFGFASNVGSYKTARH 95
>Medtr6g039230.1 | PIF1 DNA helicase/replication A1-like protein,
putative | LC | chr6:14176225-14176548 | 20130731
Length = 79
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
+++S K++W ++V+V+RAW GQ +KL F++E+VLMD K I A+IR LIY+F+
Sbjct: 9 SNVSPRKQSWTLVVRVVRAWFGQNNKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKE 68
Query: 63 VLKEGHVYAI 72
L+EG V+ I
Sbjct: 69 QLQEGMVFTI 78
>Medtr1g085690.1 | DUF223 domain protein | HC |
chr1:38294818-38296141 | 20130731
Length = 233
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 39 LEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINF 95
+++VLMD K I A+IR LIY+F+ L+EG V+ I++F V+ N+G + ++E+K+NF
Sbjct: 1 MDLVLMDRKGDRIGASIRRKLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNF 60
Query: 96 QMNIEVKPMNKASITIETYTFVP 118
+N +VK + Y+F P
Sbjct: 61 TINTKVKLSKTVLVPTNVYSFTP 83
>Medtr8g078450.1 | DUF223 domain protein | LC |
chr8:33442410-33443580 | 20130731
Length = 157
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 69 VYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXXXXXXXX 128
V+ I++F+V+ N G + +E+K+NF +N +VK + Y+F P
Sbjct: 2 VFTISSFDVASNNGSYRPSHNEYKLNFTINTKVKLSKIVLVPTNVYSFTPAPDVFNESYD 61
Query: 129 XXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYF-VDYDFLHS-FIDLK--STI 184
VIG +TGVG ER +++ VKTKMN IE++S + + +F S I L S I
Sbjct: 62 NNYLVDVIGVMTGVGVEREYERDGVKTKMNVIELDSNGFLSANTNFPASGLIQLSNLSRI 121
Query: 185 PCNNLFC 191
P N F
Sbjct: 122 PVNEEFL 128
>Medtr4g036240.2 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 480
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 77 VSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXXXXXXXXXXXXXXVI 136
V+ N G + T + +K+NFQ + P+ A ++ + FVP+S VI
Sbjct: 3 VAANGGSYKTTHYPYKLNFQFGTKCLPLCGALVSGSDFKFVPISDIVGGSYDCDYLVDVI 62
Query: 137 GFLTGVGTERVIDKEYVKTKMNTIEIESEWYFVDYDFLHSFID 179
G LTGVGTER ++ TK+N I +E++ Y + +++D
Sbjct: 63 GMLTGVGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYVD 105
>Medtr5g007120.1 | transmembrane protein, putative | HC |
chr5:1213024-1210695 | 20130731
Length = 227
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%)
Query: 47 KIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNK 106
+I A+IR LIY+F+ L+EG V+ I++F V+ N+ + + E+K+NF +N +VK
Sbjct: 22 QIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKLSIT 81
Query: 107 ASITIETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKE 151
+ Y+F P VIG + GVG ER +++
Sbjct: 82 VLVPTNVYSFTPAPDVFNEFYDNNYLVDVIGVMIGVGVEREYERD 126
>Medtr3g067530.1 | DUF223 domain protein | LC |
chr3:30107700-30116637 | 20130731
Length = 127
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 69 VYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSXXXXXXXX 128
V+ I++F+V+ N+G ++E+K+NF +N +VK + Y+F P
Sbjct: 2 VFTISSFDVASNSGLPRPSRNEYKLNFTINTKVKQSKIVLVPTNVYSFTPAPDVFNESYN 61
Query: 129 XXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIESEWYF 168
VIG +TGVG ER + VKTKMN IE++S +
Sbjct: 62 NNYLVDVIGVMTGVGVER----DGVKTKMNVIELDSNGFL 97
>Medtr8g094870.1 | nucleic acid-binding,-like fold-protein | LC |
chr8:39621390-39621084 | 20130731
Length = 74
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 21 VIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEV 77
V+R W Q +KL+F++E+VLMD K I A IR LIY+F+ L+EG V+ I++F+
Sbjct: 2 VVRVWFVQDYKKKKLSFSMELVLMDRKGDRIGAFIRRTLIYKFKEQLQEGMVFTISSFDF 61
Query: 78 SFNAGPFMTDKHE 90
++N+G + +E
Sbjct: 62 AYNSGLYKPSHNE 74
>Medtr6g465570.1 | animal RPA1 domain protein | LC |
chr6:23330063-23328693 | 20130731
Length = 172
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLIYRFER 62
A I + V+VI W + + +L ++L+D KIHA++R+ LI+ F+
Sbjct: 5 AGIKCGNTDLALTVRVIHLWSVPDRTNPVVDGSLHMLLLDEKCGKIHASVRKNLIHLFKD 64
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+ EG Y I +F V N + T H++K+NF V ++ +I +TF+P
Sbjct: 65 QIDEGSAYVIESFMVGSNDHAYKTTGHKYKLNFMGGTNVFRVSSVNIPAHHFTFMP 120
>Medtr7g113580.1 | animal RPA1 domain protein | LC |
chr7:46805630-46805936 | 20130731
Length = 74
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 21 VIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLIYRFERVLKEGHVYAITNFEV 77
V+R W Q +KL+F++E+VLMD ++I A IR LIY+F+ L+EG V+ I++F+
Sbjct: 2 VVRVWFVQDYKKKKLSFSMELVLMDRNGDRIGAFIRRTLIYKFKEQLQEGMVFTISSFDF 61
Query: 78 SFNAGPFMTDKHE 90
+ N+G + +E
Sbjct: 62 ACNSGLYKPSHNE 74
>Medtr5g016290.1 | nucleic acid-binding,-like fold-protein | LC |
chr5:5811817-5811524 | 20130731
Length = 74
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 21 VIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEV 77
V+R W Q +KL+F++E+VLMD K I A IR LIY+F+ L+EG V+ I++F+
Sbjct: 2 VVRVWFVQDYKKKKLSFSIELVLMDRKGDRIGAFIRRTLIYKFKEQLQEGMVFTISSFDF 61
Query: 78 SFNAGPFMTDKHE 90
+ N+G + +E
Sbjct: 62 ACNSGLYKPSHNE 74
>Medtr2g020010.1 | ATP synthase subunit beta | LC |
chr2:6624678-6622429 | 20130731
Length = 274
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 19/111 (17%)
Query: 12 KETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLIYRFERVLKEGH 68
+ +W + KVIR W+ +G +++F++E+VL+D ++IH E
Sbjct: 58 RASWNLKGKVIRLWQVSDFNGNRMSFSIELVLLDEASDRIH----------------EEK 101
Query: 69 VYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPL 119
Y+ N + N G + T +H +K+NFQ + +V+ + +I Y +P+
Sbjct: 102 CYSFENMGIVNNCGGYRTTRHSYKLNFQFSFKVQYLLNLNIIKSPYQLIPI 152
>Medtr3g463070.1 | DUF223 domain protein | LC |
chr3:25247995-25247587 | 20130731
Length = 88
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 18/88 (20%)
Query: 8 ISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNKIHATIREGLIYRFERVLKEG 67
IS E W I+++VIR + +S L F+L+ +LMD+ E
Sbjct: 11 ISLINENWNIVIRVIRLCLLREVSRDNLPFSLDKILMDST------------------ED 52
Query: 68 HVYAITNFEVSFNAGPFMTDKHEFKINF 95
+VY+++NF V+ N G + T KHE+K+NF
Sbjct: 53 NVYSMSNFVVASNGGSYRTTKHEYKLNF 80
>Medtr8g469510.1 | PIF1 DNA helicase/replication A1-like protein,
putative | LC | chr8:25279627-25279236 | 20130731
Length = 93
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 17 ILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAIT 73
+LV+++R W+ +LE+VL+D K IHATI++ L+Y + L EG +Y ++
Sbjct: 3 VLVRIVRMWEAPTFLKHDQTNSLEMVLVDEKGCKIHATIQKQLLYLIQAKLIEGKIYKMS 62
Query: 74 NFEVSFNAGPFMTDKHEFKINF 95
F V+ ++G + T H +K F
Sbjct: 63 FFSVAHSSGSYCTTLHLYKPVF 84
>Medtr5g045850.1 | DUF223 domain protein | HC |
chr5:20106594-20105094 | 20130731
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNKIHATIREGLIYRFE 61
+ +++S ++ +++ V+V W +R L IHAT R+ L+ +F
Sbjct: 5 YTPISAVSGGRKNFKMCVRVAHIWLMKRF------------LHGGHIHATARKDLVAKFR 52
Query: 62 RVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVPLSX 121
+++EG Y + N V FN P+ H+ K++ N ++ +I + + F P +
Sbjct: 53 SMVQEGGTYQLENAIVGFNESPYKVTSHKHKLSMMHNSTFTNVHSPAIPMNVFYFKPFN- 111
Query: 122 XXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
VIG + G R +K+ K+++ + +E
Sbjct: 112 EILSSTVEEVSTDVIGHVIERGDIRETEKDGRKSRVTDLTLE 153
>Medtr5g070620.1 | hypothetical protein | HC |
chr5:29909066-29908660 | 20130731
Length = 104
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
FD + + KE+WR +V+V+R W+ + ++E+VL+D K IHATIR+ L+Y
Sbjct: 30 FDLLSDAAPGKESWRFIVRVVRLWEAPAFLHPEQVNSVEMVLVDEKGVRIHATIRKQLLY 89
Query: 59 RFERVLKEGHVYAIT 73
F L EG VY +
Sbjct: 90 LFHNKLVEGVVYKLP 104
>Medtr1g096860.1 | animal RPA1 domain protein | LC |
chr1:43642402-43642107 | 20130731
Length = 72
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 39 LEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINF 95
+E+VL+D K I A IR LIY+F+ L++G ++ I++F+ + N+G + +E+K+NF
Sbjct: 1 MELVLLDQKGDRISAFIRRTLIYKFKEQLQKGMMFRISSFDFACNSGSYRPLHNEYKLNF 60
Query: 96 QMNIEVK 102
+N +VK
Sbjct: 61 TINTKVK 67
>Medtr1g056650.1 | DUF223 domain protein | LC |
chr1:24776375-24776671 | 20130731
Length = 72
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 39 LEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINF 95
+E+VLMD K I IR LIY+F+ L++G ++ I++F+ + N+G + +E+K+NF
Sbjct: 1 MELVLMDQKGDRISVFIRRTLIYKFKEQLQKGMMFRISSFDFACNSGSYRPLHNEYKLNF 60
Query: 96 QMNIEVK 102
+N +VK
Sbjct: 61 TINTKVK 67
>Medtr4g058660.1 | DUF223 domain protein | LC |
chr4:21583173-21581618 | 20130731
Length = 326
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSEGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHSLAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVYTDVIGHVIERGNIRETEKDERKSRVIDLTLE 168
>Medtr7g451880.1 | DUF223 domain protein | LC |
chr7:17695455-17697013 | 20130731
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 6 YTPISAVSEGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 65
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 66 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHSLAIPMNVFEFKP 125
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 126 FN-EILSSTVEEVYTDVIGHVIERGNIRETEKDGRKSRVIDLTLE 169
>Medtr5g019960.1 | DUF223 domain protein | LC | chr5:7576443-7574656
| 20130731
Length = 248
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 33 RKLAFTLEVVLMDNKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFK 92
R F + V +KIHAT+R+ L+ F+ + E +Y + + FN GPF +H++K
Sbjct: 45 RGKTFVMNVHRSADKIHATVRKSLVKSFQAKISERSLYELEQIMIGFNEGPFKLTRHKYK 104
Query: 93 INFQMNIE-VKPMNKASITIETYTF 116
I N +K N+ +I + + F
Sbjct: 105 ITMMQNSRWIKIQNETNIPLNNFDF 129
>Medtr1g023370.1 | DUF223 domain protein | HC | chr1:7479056-7480611
| 20130731
Length = 307
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr3g032330.1 | animal RPA1 domain protein | LC |
chr3:10175643-10174514 | 20130731
Length = 180
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 8 ISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFERVL 64
+S A RI V++ R W ++ +K + ++VL+D K IHATI RVL
Sbjct: 26 LSNAAPDARIKVRIARMWNTLNITKKKEMISTDMVLIDEKENCIHATIPMRFSPSLRRVL 85
Query: 65 KEGHVYAITNFEVSFN 80
+EG VY I+ FEVS N
Sbjct: 86 QEGKVYVISRFEVSKN 101
>Medtr5g030110.1 | DUF223 domain protein | HC |
chr5:12653763-12655318 | 20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATTRKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr2g007410.1 | DUF223 domain protein | HC | chr2:977639-976084 |
20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATTRKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr7g024060.1 | DUF223 domain protein | HC | chr7:7887410-7888965
| 20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr6g087820.1 | DUF223 domain protein | HC |
chr6:33047336-33045781 | 20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr5g091480.1 | DUF223 domain protein | HC |
chr5:39876643-39878198 | 20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr5g081190.1 | DUF223 domain protein | HC |
chr5:34759809-34761364 | 20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr5g056290.1 | DUF223 domain protein | HC |
chr5:23186815-23188370 | 20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr3g031190.1 | DUF223 domain protein | HC |
chr3:26946405-26947960 | 20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr2g010570.1 | DUF223 domain protein | HC | chr2:2447911-2449466
| 20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr2g005490.1 | DUF223 domain protein | HC | chr2:182677-184232 |
20130731
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
+ VIG + G R +K+ K+++ + +E
Sbjct: 125 FN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLE 168
>Medtr1g082860.1 | DUF223 domain protein | HC |
chr1:36868467-36866911 | 20130731
Length = 274
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPASIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
>Medtr8g005940.1 | DUF223 domain protein | LC | chr8:407715-406164 |
20130731
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ ++I I + F
Sbjct: 65 KFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKLSMMHNSTFTKVHSSAIPINIFEF-K 123
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
L VIG + G R +K+ K+++ I +E
Sbjct: 124 LFNEILSSTVEEVSTDVIGHVIERGDIRETEKDGRKSRVIDITLE 168
>Medtr1g087080.1 | DUF223 domain protein | LC |
chr1:38983899-38983418 | 20130731
Length = 94
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%)
Query: 46 NKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMN 105
++I IR LIY+F+ L+EG V+ I++F+ + N+G + +E+K+NF +N ++
Sbjct: 12 DRIGVFIRRTLIYKFKEQLQEGMVFTISSFDFASNSGSYRPSHNEYKLNFTINTKINIFK 71
Query: 106 KASITIETYTFV 117
+ + Y+F
Sbjct: 72 SSLVPTNMYSFT 83
>Medtr7g027115.1 | DUF223 domain protein | LC | chr7:9176826-9175884
| 20130731
Length = 127
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 46 NKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMN 105
++I A IR LIY+F+ L+EG V+ I++ + + N+G + +E+K+NF N ++K ++
Sbjct: 22 DRIGAFIRRTLIYKFKEQLQEGMVFMISSIDFACNSGSYRPSHNEYKLNFTTNTKIK-IS 80
Query: 106 KASI 109
K+S+
Sbjct: 81 KSSL 84
>Medtr3g102720.1 | DUF223 domain protein | LC |
chr3:47333755-47333287 | 20130731
Length = 93
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 45 DNKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPM 104
D I A IR LIY+F+ +EG V+ I++F+ + N+ + +E+K+NF +N +VK
Sbjct: 10 DVSIGAFIRRTLIYKFKEQFQEGMVFTISSFDFACNSCSYRPSHNEYKLNFTINTKVKIS 69
Query: 105 NKASITIETYTFV 117
+ + Y+F
Sbjct: 70 KSSLVPTNMYSFT 82
>Medtr1g110330.1 | DUF223 domain protein | LC |
chr1:49788911-49787357 | 20130731
Length = 210
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 22 IRAWKGQRLSGRKLAFTLEVVLMDNKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNA 81
I A G R + L + +IHAT R+ L+ +F +++EG Y + N V FN
Sbjct: 9 ISAVSGGR---KNLKMCASCSHLGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVGFNE 65
Query: 82 GPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
P+ H+ K+ N ++ SI + + F P
Sbjct: 66 SPYKVTSHKHKLKMMHNSTFTKVHSPSIPMNVFKFKP 102
>Medtr1g011490.1 | DUF223 domain protein | HC | chr1:2049055-2047500
| 20130731
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIY 58
+ +++S ++ ++ V+V W + + ++L+D K IHAT R+ L+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIWLIREKKVPASIIFMNMLLVDEKGGRIHATARKDLVA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
+F +++EG Y + N V FN P+ H+ K++ N ++ +I + + F P
Sbjct: 65 KFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKP 124
>Medtr1g073290.1 | DUF223 domain protein | LC |
chr1:28644982-28644658 | 20130731
Length = 94
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 41 VVLMDNKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIE 100
V ++I IR LIY+F+ L+EG + I+ F+ + N+G + +E+K+NF +N +
Sbjct: 7 VFCFGDRICVFIRRTLIYKFKEQLQEGMAFTISLFDFACNSGLYRPSHNEYKLNFTINTK 66
Query: 101 VKPMNKASITIETYTF 116
+K + + Y+F
Sbjct: 67 IKIFKSSLVPTNMYSF 82
>Medtr2g015610.1 | transmembrane protein, putative | LC |
chr2:4652049-4650309 | 20130731
Length = 98
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 46 NKIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMN 105
++I IR LIY+F+ L+EG V+ I++F+ + N+G + +E+K+NF +N ++
Sbjct: 16 DRIGVFIRRTLIYKFKEQLQEGMVFTISSFDFASNSGSYRPSHNEYKLNFTINTKINIFK 75
Query: 106 KASITIETYTF 116
+ Y+F
Sbjct: 76 SFLVPTNMYSF 86
>Medtr4g070090.1 | replication factor-A-like protein | HC |
chr4:26377794-26380276 | 20130731
Length = 502
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 8 ISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---------IHATIREGLIY 58
+S A +I V+V R W ++ +K + ++VL+D K IHATI
Sbjct: 26 LSNAAPDTKIKVRVARMWDTLNITKKKEIISTDMVLIDEKVFINEIANCIHATIPRRFSP 85
Query: 59 RFERVLKEGHVYAITNFEVSFN 80
++VL+EG +Y I++FEVS N
Sbjct: 86 SLKKVLQEGKIYVISHFEVSKN 107
>Medtr3g015660.1 | nucleic acid-binding,-like fold-protein | HC |
chr3:4592669-4593790 | 20130731
Length = 242
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFT---LEVVLMDNK---IHATIREG 55
+ +++S ++ ++ V+V W + +K+ + + ++L+D K HAT R+
Sbjct: 5 YTPISAVSGGRKNLKMCVRVAHIW---LIRDKKVPTSIIFMNMLLVDEKGGCFHATARKD 61
Query: 56 LIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYT 115
L+ +F +++EG Y + N V FN P+ H+ K++ ++ +I + +
Sbjct: 62 LVAKFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKLSMMHTSTFTKVHSPAIPMNVFE 121
Query: 116 FVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKTKMNTIEIE 163
F P + VIG + G R +K+ K+++ + +E
Sbjct: 122 FKPFN-GILSSTVEEVSTDVIGHVIERGDIRETEKDGRKSRVIDLTLE 168
>Medtr8g446640.1 | DUF223 domain protein | HC |
chr8:18267497-18266002 | 20130731
Length = 306
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 39 LEVVLMDNK---IHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINF 95
+ ++L+D K IHAT R+ L+ +F +++EG Y + N V FN P+ H+ K++
Sbjct: 23 MNMLLVDEKGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSM 82
Query: 96 QMNIEVKPMNKASITIETYTFVPLSXXXXXXXXXXXXXXVIGFLTGVGTERVIDKEYVKT 155
N ++ +I + + F P + VIG + G R +K+ K+
Sbjct: 83 MHNSTFTKVHLPAIPMNVFEFKPFN-EILSSTVEEVSTDVIGHVIERGDIRETEKDRRKS 141
Query: 156 KMNTIEIE 163
++ + +E
Sbjct: 142 RVIDLTLE 149
>Medtr1g105785.1 | replication factor-A carboxy-terminal domain
protein | HC | chr1:47732917-47735741 | 20130731
Length = 566
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 6 ASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMDNK---IHATIREGLIYRFER 62
A+I K ++ V+V+ W + ++ ++L+D+K I A+ ++ L+ R
Sbjct: 9 AAIVAGKINIKLRVRVVHVWTVSEFNNPNEDNSIHMLLLDDKLGKIQASAKKHLVPRIRS 68
Query: 63 VLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
++EG Y I N V+ N + +H FK+N N + ++ A+I + + F+P
Sbjct: 69 NVEEGSTYDIENVLVTKNDPKYQVTQHRFKLNLIDNTKFFKIDAATIPLNHFDFMP 124
>Medtr2g450060.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:22081675-22078797 | 20130731
Length = 570
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 2 FDDFASISRAKETWRILVKVIRAWKGQRLSGRKLAFTLEVVLMD---NKIHATIREGLIY 58
F+ A+++ K+ W++ V+V W + G++ LE++++D N I I G
Sbjct: 9 FETIAAVTNKKDFWKLAVRVKDKWTVVK-DGKE---HLEMIIVDAKGNNIQVVIPTGYKA 64
Query: 59 RFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNKASITIETYTFVP 118
++++L E Y ++NF+V N F H++ + + V +N I I F P
Sbjct: 65 VYDKILMENTTYTLSNFQVQNNDLAFKASDHKYMLKWNSATNVVDVNLHDIPIPNTKFKP 124
Query: 119 LSXXXXXXXXXXXXXXVIGFLTGVG 143
+ VIG + +G
Sbjct: 125 FAEIISGKWRSDLLVHVIGMVQDMG 149
>Medtr2g010270.1 | animal RPA1 domain protein | LC |
chr2:2299423-2300917 | 20130731
Length = 315
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 47 KIHATIREGLIYRFERVLKEGHVYAITNFEVSFNAGPFMTDKHEFKINFQMNIEVKPMNK 106
+IHAT R+ L+ +F +++EG Y + N V FN P+ H+ K++ N ++
Sbjct: 34 RIHATSRKDLVAKFRSMVQEGGTYQLENAMVGFNESPYKVTSHKHKLSMMHNSNFTKVHS 93
Query: 107 ASITIETYTFVP 118
+I + + F P
Sbjct: 94 PAIPMNVFEFKP 105