Miyakogusa Predicted Gene

Lj0g3v0346989.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0346989.2 Non Characterized Hit- tr|C6THR5|C6THR5_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,68.25,7e-16,
,CUFF.23812.2
         (74 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g106880.1 | peroxisomal membrane PEX14-like protein, putat...   120   4e-28

>Medtr4g106880.1 | peroxisomal membrane PEX14-like protein, putative
           | HC | chr4:43922357-43914901 | 20130731
          Length = 523

 Score =  120 bits (300), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 57/74 (77%), Positives = 68/74 (91%), Gaps = 1/74 (1%)

Query: 1   MAMVQRGEKPANIRDINDLPPNPSQEPSNPLLMPRSKPWEVGQVQNTSTQVLQPQQNGED 60
           MAMVQRGEKP+NIR+INDLPPNPSQ+PS+P ++PRSKPWE+GQVQNTS+QV QPQ NGE+
Sbjct: 331 MAMVQRGEKPSNIREINDLPPNPSQQPSDPRILPRSKPWEIGQVQNTSSQVFQPQANGEE 390

Query: 61  LNNIKVQEATQSNG 74
            + IKVQ+ TQSNG
Sbjct: 391 -SYIKVQDTTQSNG 403