Miyakogusa Predicted Gene

Lj0g3v0346989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0346989.1 tr|G7JNV8|G7JNV8_MEDTR Peroxisomal membrane
protein PEX14 OS=Medicago truncatula GN=MTR_4g106880
PE=,52.7,0.0000000009, ,CUFF.23812.1
         (51 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g106880.1 | peroxisomal membrane PEX14-like protein, putat...    70   4e-13

>Medtr4g106880.1 | peroxisomal membrane PEX14-like protein, putative
           | HC | chr4:43922357-43914901 | 20130731
          Length = 523

 Score = 70.1 bits (170), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 46/74 (62%), Gaps = 24/74 (32%)

Query: 1   MAMVQRGEKPANIR-----------------------PWEVGQVQNTSTQVLQPQQNGED 37
           MAMVQRGEKP+NIR                       PWE+GQVQNTS+QV QPQ NGE+
Sbjct: 331 MAMVQRGEKPSNIREINDLPPNPSQQPSDPRILPRSKPWEIGQVQNTSSQVFQPQANGEE 390

Query: 38  LNNIKVQEATQSNG 51
            + IKVQ+ TQSNG
Sbjct: 391 -SYIKVQDTTQSNG 403