Miyakogusa Predicted Gene

Lj0g3v0346539.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0346539.1 tr|D2CJC6|D2CJC6_ELAGV Acetyl-CoA carboxylase
biotin carboxyl carrier protein subunit OS=Elaeis
guin,55.7,1e-16,seg,NULL; Biotin_lipoyl,Biotin/lipoyl attachment;
BIOTINYL_LIPOYL,Biotin/lipoyl attachment; SUBFAMIL,CUFF.23801.1
         (288 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g071960.1 | biotin/lipoyl attachment domain protein | HC |...   401   e-112
Medtr5g083520.1 | biotin/lipoyl attachment domain protein | HC |...   315   4e-86
Medtr2g103280.1 | biotin carboxyl carrier acetyl-CoA carboxylase...   138   7e-33
Medtr7g013100.1 | biotin carboxyl carrier acetyl-CoA carboxylase...    52   7e-07
Medtr6g015020.1 | biotin carboxyl carrier acetyl-CoA carboxylase...    50   2e-06

>Medtr3g071960.1 | biotin/lipoyl attachment domain protein | HC |
           chr3:32322523-32329477 | 20130731
          Length = 274

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/293 (68%), Positives = 228/293 (77%), Gaps = 24/293 (8%)

Query: 1   MESSAAIRSFHC---TVPHVRSSFEKVAVVPCHNARWNSKSGLFIQRLANDRMLINSQAK 57
           M+SSAAIRSFH    T+ HVRSS E+ AVVPCH  RWNS                    +
Sbjct: 1   MDSSAAIRSFHYPIGTISHVRSSIERAAVVPCHKIRWNSN-------------------R 41

Query: 58  GRKTLVSCAKAVEAINTAKSDASLDSTSQDSVEKKALQSATFPNGLEALVLEVCDETEIA 117
           G+K LVSCAKAVEAINT KSDASLDST QD +EKK LQ+ATFP+G EAL+L+VCDETEIA
Sbjct: 42  GKKALVSCAKAVEAINTTKSDASLDSTQQDKLEKKPLQTATFPDGFEALILDVCDETEIA 101

Query: 118 ELKVKVGEFEMHLKRNIGATKAPLSNXXXXXXXXXXXKPMDESAPSTPQSLPPKSSPEKT 177
           ELK+KVGEFEMHLKRNIGATKAPLSN           KPMDESAP+T Q LPP SS EKT
Sbjct: 102 ELKLKVGEFEMHLKRNIGATKAPLSNISPTTPPPIPSKPMDESAPTTAQPLPPTSSSEKT 161

Query: 178 NPFVNASVQKSSKLAQLEASGTNNYVIISSPTVGLFRRGRTVKGKRQPPTYKEGDLIKEG 237
           NPF N S QKSSKL  LEASGT+ Y ++SSPTVG FRRGRTVKG++ PP  KEGD+I+EG
Sbjct: 162 NPFANVSSQKSSKLIALEASGTSTYALVSSPTVGSFRRGRTVKGQKHPPICKEGDVIREG 221

Query: 238 QVIGYLDQFGT--GLPVKSDVAGEVLKLLVEDGEPVGYGDNLIAVLPSFHDIK 288
           QVIGYLDQFG   G+P+KSDVAGEVLKLL+E+G+PVG+GD ++AVLPSFHDIK
Sbjct: 222 QVIGYLDQFGVGAGIPIKSDVAGEVLKLLLEEGDPVGFGDPILAVLPSFHDIK 274


>Medtr5g083520.1 | biotin/lipoyl attachment domain protein | HC |
           chr5:36047530-36052948 | 20130731
          Length = 279

 Score =  315 bits (806), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 177/288 (61%), Positives = 210/288 (72%), Gaps = 9/288 (3%)

Query: 1   MESSAAIRSFHCTVPHVRSSFEKVAVVPCHNARWNSKSGLFIQRLANDRMLINSQAKGRK 60
           M+SSAAIRS HC + H++SS +K  ++   N   N +S  F+Q LA     I S  K  +
Sbjct: 1   MDSSAAIRSSHCFMSHMQSSLQKPGLIHVQNVGCNFQSRSFVQNLAISDKHIVSHNKWNR 60

Query: 61  TLVSCAKAVEAINTAKSDASLDSTSQDSVEKKALQSATFPNGLEALVLEVCDETEIAELK 120
            LVSC K  + I+ AKS+ASL+S +++S+ KK LQ  TFPNG EAL+ EVCDETEIAELK
Sbjct: 61  VLVSCTKTAKEIDAAKSEASLESIAKESLVKKPLQ--TFPNGFEALISEVCDETEIAELK 118

Query: 121 VKVGEFEMHLKRNIGATKAPLSNXXXXXXXXXXXKPMDESAPSTPQSLPPKSSPEKTNPF 180
           +KVGEFEMH+KRNIG + AP+SN           KPM +SA STP   P KSSP KTNPF
Sbjct: 119 LKVGEFEMHMKRNIGLSAAPVSNISPT-------KPMVDSASSTPTPSPSKSSPAKTNPF 171

Query: 181 VNASVQKSSKLAQLEASGTNNYVIISSPTVGLFRRGRTVKGKRQPPTYKEGDLIKEGQVI 240
           VN S  KS KLA LEASG  NYV+++S TVG F+RGRTVKG + PP  KEGD+IK+GQVI
Sbjct: 172 VNDSNDKSPKLAALEASGNKNYVLVASTTVGSFQRGRTVKGNKLPPVCKEGDMIKDGQVI 231

Query: 241 GYLDQFGTGLPVKSDVAGEVLKLLVEDGEPVGYGDNLIAVLPSFHDIK 288
           GY+D FGT LPVKSDV GEVLKLL +DGE VGYGD LIAVLPSFHDIK
Sbjct: 232 GYVDNFGTSLPVKSDVDGEVLKLLFQDGEAVGYGDALIAVLPSFHDIK 279


>Medtr2g103280.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr2:44448918-44454351 | 20130731
          Length = 277

 Score =  138 bits (347), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 141/280 (50%), Gaps = 45/280 (16%)

Query: 31  NARWNSKSGLFIQRLANDRMLINSQAKGRKTLVSCAKAVEAINTAKSDASLD----STSQ 86
           N  +  +   F Q     R  I+ ++     LV+  + V ++ T  +D S +    S S+
Sbjct: 17  NLHFGQERAEFSQHFGT-RSWISRKSLQYARLVASKQTVRSL-TPSNDQSAEIQSVSRSE 74

Query: 87  DSVEKK---ALQSATFPN--GLEALVLEVCDETEIAELKVKVGEFEMHLKRNIGATKAPL 141
           D  E+     L +  FPN   +E L+  +CD   I EL++K+  F + + R++      L
Sbjct: 75  DGSEESKSSGLTNQLFPNFNDVEFLLTNLCDTASIGELELKLDGFHLRVVRDLTEKSKTL 134

Query: 142 SNXXXXXXXXXXXKPMDESAPSTPQSLPPKSSPEKTNPFVNASVQKSSKLAQ-------- 193
                               PS P  +   +  E   P  N SV   + LA         
Sbjct: 135 -------------------PPSIPAPVSINTPAEAPKP--NGSVSTLTTLAISKPAPSSL 173

Query: 194 -----LEASGTNNYVIISSPTVGLFRRGRTVKGKRQPPTYKEGDLIKEGQVIGYLDQFGT 248
                LE +     VII SPTVG+FRR RT+KGKR PP+ +E   ++EG+VI Y++Q G 
Sbjct: 174 SIEGFLEKAADEGLVIIHSPTVGIFRRSRTIKGKRAPPSCQEMQNVEEGKVICYIEQLGG 233

Query: 249 GLPVKSDVAGEVLKLLVEDGEPVGYGDNLIAVLPSFHDIK 288
            LPV+SDV+GEV+K+L EDG+PVGYGD LIA+LPSF  IK
Sbjct: 234 QLPVESDVSGEVIKILREDGDPVGYGDTLIAILPSFPGIK 273


>Medtr7g013100.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr7:3720376-3725453 | 20130731
          Length = 287

 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 52/221 (23%)

Query: 74  TAKSDASLDSTSQDSVEKKALQSATFPNGLEALVLEVCDETEIAELKVKVGEFEMHLKRN 133
           +A +DAS  ST  D V +               ++++ D  +I EL++K   +E+ +++ 
Sbjct: 107 SASTDASSVSTFMDQVSE---------------LVKLVDSRDIMELELKQAGYELMIRKK 151

Query: 134 IGATKAPLSNX------------XXXXXXXXXXKPMDESAPSTPQSLPPKSSPEKTNPFV 181
                 P+S                             SAP  P ++ P   P KTN   
Sbjct: 152 EALQPPPVSQQPFPYPAYPPSYQAPLPPPPPVVASTPPSAP--PSNVVPALPPAKTN--- 206

Query: 182 NASVQKSSKLAQLEASGTNNYVIISSPTVGLFRRGRTVKGKRQPPTYKEGDLIKEGQVIG 241
                 +S   QL+            P  G F R     G  +PP  K GD +++GQV+ 
Sbjct: 207 ------ASSHPQLKC-----------PMAGTFYR---CPGPGEPPFVKVGDQVQKGQVVC 246

Query: 242 YLDQFGTGLPVKSDVAGEVLKLLVEDGEPVGYGDNLIAVLP 282
            ++       +++D +G ++++LVEDG+PV  G  L A+ P
Sbjct: 247 IIEAMKLMNEIEADRSGTIVEVLVEDGKPVSVGMPLFAIAP 287


>Medtr6g015020.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr6:4863345-4867174 | 20130731
          Length = 278

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 34/230 (14%)

Query: 66  AKAVEAINTAKSDASLD-------STSQDSVEKKALQSATFPNGLEALVLEVCDETEIAE 118
           A  VE +N+A + AS +       S    +V  ++  SA F + +  LV+ V D  +I E
Sbjct: 70  AAVVENLNSAPTVASSEEKENQNGSVPASTVSDESAISA-FMSQVADLVILV-DSRDIVE 127

Query: 119 LKVKVGEFEMHLKRNIG-----ATKAPLSNXXXXXXXXXXXKPMDESAPSTPQSLPP-KS 172
           L++K  ++E+ +++        AT  P S             P   +A S   S PP K+
Sbjct: 128 LQLKQSDYELVIRKKEALQPPPATAMPQSAPPLYYPTLPLPPPPPPTAYSATASSPPSKA 187

Query: 173 SPEKTNPFVNASVQKSSKLAQLEASGTNNYVIISSPTVGLFRRGRTVKGKRQPPTYKEGD 232
           +P    P  +AS                ++  +  P  G F R     G  +PP  + GD
Sbjct: 188 TPALPPPKTSAS----------------SHPPLKCPMAGTFYR---CPGPGEPPFVQVGD 228

Query: 233 LIKEGQVIGYLDQFGTGLPVKSDVAGEVLKLLVEDGEPVGYGDNLIAVLP 282
            +++GQVI  ++       +++D +G + ++LVEDG+PV     L  ++P
Sbjct: 229 TVQKGQVICIIEAMKLMNEIEADQSGTIAEILVEDGKPVSVDLPLFVIVP 278