Miyakogusa Predicted Gene

Lj0g3v0345909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0345909.1 Non Characterized Hit- tr|B7FJB0|B7FJB0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,89.24,0,Cyclin,Cyclin PHO80-like; no description,Cyclin-like;
Cyclin-like,Cyclin-like; SUBFAMILY NOT NAMED,N,CUFF.23726.1
         (224 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g028060.1 | cyclin p4 | HC | chr4:9659806-9657678 | 20130731    356   1e-98
Medtr8g007380.1 | cyclin p4 | HC | chr8:1499976-1501648 | 20130731    156   1e-38
Medtr7g081130.1 | cyclin p4 | HC | chr7:30934930-30933268 | 2013...   156   2e-38
Medtr2g088860.1 | cyclin p4 | HC | chr2:37475502-37474092 | 2013...   130   1e-30
Medtr7g094880.2 | cyclin p4 | HC | chr7:37891633-37894536 | 2013...   128   5e-30
Medtr7g094880.1 | cyclin p4 | HC | chr7:37892086-37894536 | 2013...   127   6e-30

>Medtr4g028060.1 | cyclin p4 | HC | chr4:9659806-9657678 | 20130731
          Length = 218

 Score =  356 bits (913), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 185/221 (83%), Positives = 201/221 (90%), Gaps = 5/221 (2%)

Query: 4   SSSLTISPRKLRSDLYSYSYQEDSSTPLVINVLASLIERSMARTERIVKNCSKSLSKAIS 63
           SSSLTISPRKL  DLYSYSY+EDS+TPLVINVLASLIER+MAR +RIVKNCS  +    S
Sbjct: 3   SSSLTISPRKLHYDLYSYSYKEDSNTPLVINVLASLIERNMARAQRIVKNCSSRVLSKAS 62

Query: 64  TNIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLL 123
           T IFDCREIPD+TIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNN GFRIN+RNVHRLL
Sbjct: 63  TKIFDCREIPDLTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNLGFRINSRNVHRLL 122

Query: 124 ITTIMVASKYVEDLNYRNSYFGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCH 183
           ITTIMVASKYVED+N+RNSYF +VGGLTT+E+N+LELEFLF+M FKLHVNVS+FESYC H
Sbjct: 123 ITTIMVASKYVEDMNFRNSYFAKVGGLTTSELNELELEFLFMMNFKLHVNVSVFESYCSH 182

Query: 184 LEREVSIGGGYHIERTLRCAEEIKTRHREERGYTLIARVML 224
           LEREVSIGGGYHIERTLRCAEEIK     ERG+T IARVML
Sbjct: 183 LEREVSIGGGYHIERTLRCAEEIK-----ERGHTQIARVML 218


>Medtr8g007380.1 | cyclin p4 | HC | chr8:1499976-1501648 | 20130731
          Length = 200

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 111/164 (67%), Gaps = 8/164 (4%)

Query: 25  EDSSTPLVINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLERI 84
           E    P +IN L+SL+ER +A +    +N  K        +IF     P+++IQSYLERI
Sbjct: 5   ESPMMPKLINFLSSLLER-VAESNDETQNHHK-------ISIFHGLSRPNISIQSYLERI 56

Query: 85  FRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRNSYF 144
           F+Y     S ++VAYVY+DRF Q  P   IN+ NVHRLLIT++MVA+K+++D+ Y N+Y+
Sbjct: 57  FKYANCSSSCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDDVCYNNAYY 116

Query: 145 GRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLEREV 188
            +VGG+T  E+N LEL+FLF +GF L+V    F++YC HL+RE+
Sbjct: 117 AKVGGITKTEMNFLELDFLFGLGFNLNVTPVTFQAYCVHLQREM 160


>Medtr7g081130.1 | cyclin p4 | HC | chr7:30934930-30933268 |
           20130731
          Length = 203

 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 129/196 (65%), Gaps = 18/196 (9%)

Query: 30  PLVINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLERIFRYTR 89
           P +I  L+SL++R +A +  I +   + L + IS  +F     P+++IQ+YLERIF+Y  
Sbjct: 11  PKLIAFLSSLLKR-VAESNDINQ---QLLEQKIS--VFQGLTCPNISIQNYLERIFKYAN 64

Query: 90  AGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRNSYFGRVGG 149
             PS ++VAYVY+DRF Q  P   IN+ NVHRLLIT++MVA+K+++D+ Y N+Y+ +VGG
Sbjct: 65  CSPSCFIVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGG 124

Query: 150 LTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLEREV-----------SIGGGYHIER 198
           +TT E+N LEL+FLF +GF L+V  + F++YC HL+ E+           S+G G  +  
Sbjct: 125 ITTIEMNFLELDFLFGLGFHLNVTPNTFQAYCVHLQSEMMMIQPLNFTDSSLGLGKSL-N 183

Query: 199 TLRCAEEIKTRHREER 214
           T  C  E ++ H++++
Sbjct: 184 THVCFNEDESSHQKQQ 199


>Medtr2g088860.1 | cyclin p4 | HC | chr2:37475502-37474092 |
           20130731
          Length = 233

 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 116/180 (64%), Gaps = 9/180 (5%)

Query: 30  PLVINVLASLIERSMARTERIVKNCSKSLSK--------AISTNIFDCREIPDMTIQSYL 81
           P V+ +L+S +E+ ++R E++V   ++ L K          S N+F     P ++I  YL
Sbjct: 26  PRVLWILSSTLEKLVSRNEKLVDELNQELDKLNNGSVRLGKSLNLFHGVRAPGISIPKYL 85

Query: 82  ERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRN 141
           ERI++YT   PS +VV YVYID     +P   + + NVHRLL+T++MVASK ++D +Y N
Sbjct: 86  ERIYKYTNCSPSCFVVGYVYIDMLTHKHPDSLVLSLNVHRLLVTSVMVASKMLDDEHYNN 145

Query: 142 SYFGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLEREVSIGG-GYHIERTL 200
           + + RVGG++  E+NKLELE LFL+ FK+ V   +FESYC HLE+E+ + G G  IER L
Sbjct: 146 AVYARVGGVSNAELNKLELELLFLLDFKVMVCPRVFESYCLHLEKEMLVNGTGLKIERIL 205


>Medtr7g094880.2 | cyclin p4 | HC | chr7:37891633-37894536 |
           20130731
          Length = 218

 Score =  128 bits (321), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 110/158 (69%), Gaps = 5/158 (3%)

Query: 30  PLVINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLERIFRYTR 89
           P V+++L+SL+ERS+ + E +V+  ++ +   ++  +F     P ++++ Y++RIF+Y+ 
Sbjct: 31  PRVLSLLSSLLERSVQKNEMLVE--TEHIEDVVT--VFHGLSAPTLSLRKYIDRIFKYSG 86

Query: 90  AGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRNSYFGRVGG 149
             PS +VVA++Y+DR  QN    ++ + NVHRLLIT+IM+A+K+++D  + N+Y+ RVGG
Sbjct: 87  CSPSCFVVAHIYVDRLLQNTE-IKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYARVGG 145

Query: 150 LTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLERE 187
           + T E+N+LE+ FLF + F+L V+V  F  YC  LE E
Sbjct: 146 VKTCELNRLEMSFLFGIDFRLQVSVDTFHKYCWQLEEE 183


>Medtr7g094880.1 | cyclin p4 | HC | chr7:37892086-37894536 |
           20130731
          Length = 233

 Score =  127 bits (320), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 110/158 (69%), Gaps = 5/158 (3%)

Query: 30  PLVINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLERIFRYTR 89
           P V+++L+SL+ERS+ + E +V+  ++ +   ++  +F     P ++++ Y++RIF+Y+ 
Sbjct: 46  PRVLSLLSSLLERSVQKNEMLVE--TEHIEDVVT--VFHGLSAPTLSLRKYIDRIFKYSG 101

Query: 90  AGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRNSYFGRVGG 149
             PS +VVA++Y+DR  QN    ++ + NVHRLLIT+IM+A+K+++D  + N+Y+ RVGG
Sbjct: 102 CSPSCFVVAHIYVDRLLQNTE-IKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYARVGG 160

Query: 150 LTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLERE 187
           + T E+N+LE+ FLF + F+L V+V  F  YC  LE E
Sbjct: 161 VKTCELNRLEMSFLFGIDFRLQVSVDTFHKYCWQLEEE 198