Miyakogusa Predicted Gene

Lj0g3v0345899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0345899.1 tr|G7LH32|G7LH32_MEDTR Microfibrillar-associated
protein OS=Medicago truncatula GN=MTR_8g083140
PE=4,59.76,1.4013e-45,Prp19_bind,Micro-fibrillar-associated protein 1,
C-terminal; coiled-coil,NULL; seg,NULL; SUBFAMILY N,CUFF.23725.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g083140.1 | microfibrillar-associated-like protein | HC | ...   115   4e-26

>Medtr8g083140.1 | microfibrillar-associated-like protein | HC |
           chr8:35121606-35118300 | 20130731
          Length = 436

 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/131 (48%), Positives = 74/131 (56%), Gaps = 12/131 (9%)

Query: 39  AWKVXXXXXXXXXXXXXXXXLKEKQETQRLRNMSEEERIREWQIRXXXXXXXXXXXXXWR 98
           AWKV                LKEK+E +R+RNM+EEER    +               WR
Sbjct: 265 AWKVREIGRIKRDREDREALLKEKEEVERVRNMTEEERR---EWERKNPKPSQSSKQKWR 321

Query: 99  FMQRYYHSGAFFQDQ---------LDTIMLHDFSAPTGQDKMDKTILPSVMQVKRFGLRG 149
           FMQ+YYH GAFFQ            D I   DFSAPTG+DKMDKTILP VMQVK FG  G
Sbjct: 322 FMQKYYHKGAFFQSNSDDRAATVGTDNIFTRDFSAPTGEDKMDKTILPKVMQVKHFGRSG 381

Query: 150 RSKWTHLINED 160
           R+KW+HL+NED
Sbjct: 382 RTKWSHLVNED 392