Miyakogusa Predicted Gene

Lj0g3v0345269.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0345269.1 CUFF.23689.1
         (1330 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g051230.1 | condensin complex subunit 1 | HC | chr1:200271...  2125   0.0  
Medtr2g436590.1 | condensin-2 complex subunit D3 | HC | chr2:142...    61   8e-09
Medtr7g110590.1 | condensin-2 complex subunit D3-like protein | ...    61   8e-09
Medtr2g436590.2 | condensin-2 complex subunit D3 | HC | chr2:142...    61   8e-09

>Medtr1g051230.1 | condensin complex subunit 1 | HC |
            chr1:20027112-20017618 | 20130731
          Length = 1384

 Score = 2125 bits (5506), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1066/1337 (79%), Positives = 1143/1337 (85%), Gaps = 26/1337 (1%)

Query: 1    MAPHFVFPRTLQDLEEESPEDNR----------LCVQNPIDLASLRSSQLEEFVKGVSFD 50
            MAP FVFPRTLQ LE++S  ++           L VQNP +++SL SSQLEEFVKGVSFD
Sbjct: 1    MAPTFVFPRTLQHLEQDSSSEDNDNNNNNNNNNLSVQNPTNISSLSSSQLEEFVKGVSFD 60

Query: 51   LSDKELLCVEDHDVFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLLPNVDSLSRASE- 109
            LSD+E+LC++D DVFD                            AVLLPNVDSLSR S  
Sbjct: 61   LSDREILCIQDQDVFDRVYSLVRGYSSLHHSCKLNLVESLRSNLAVLLPNVDSLSRVSNE 120

Query: 110  --GDLPFLLDRLASHRNAFKIYTFFLLSIVLAEDXXXXXXXXXXXXXXXXXRKKQPAKSW 167
               D   ++DR+ASHRNAFKIYT+FLL+IVLAED                 RKKQPA SW
Sbjct: 121  DVDDHVLVVDRVASHRNAFKIYTYFLLNIVLAEDSNNAPKVVAASS-----RKKQPAHSW 175

Query: 168  NWEPQRARILNLIANSLEINLELLFGSPDLDEGYLSFITKNTFSMFENTALLKDSDAKDA 227
            NWEPQRARILNLIA+SLEINLELLFGS D DEGYLSFITKN F+MFEN ALLKDS++KDA
Sbjct: 176  NWEPQRARILNLIASSLEINLELLFGSSDPDEGYLSFITKNAFTMFENAALLKDSNSKDA 235

Query: 228  LCRIIGACSTKYHYTAQSCASIMHLIHKYDFVVTHMADAVAGAKKKYSDGTLATSLVRDI 287
            LCRIIGACSTKYHYT QS  SIMHLIHKYDF V HMADAVAGA+KKYSDG+LATS+VR+I
Sbjct: 236  LCRIIGACSTKYHYTTQSSVSIMHLIHKYDFAVVHMADAVAGAEKKYSDGSLATSIVREI 295

Query: 288  GRTNPKDYVKDTAGAENVGRFLVELADRLPKLISTNIGILITHFGGESYKIRNALVAVLG 347
            GRTNPKDYVKDT GAENVGRFLVELADR+PKLISTNIGIL+ HFGGESYKIRNALVAVLG
Sbjct: 296  GRTNPKDYVKDTIGAENVGRFLVELADRIPKLISTNIGILVPHFGGESYKIRNALVAVLG 355

Query: 348  KLIAKAFKDVDSAEVSSKSIRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSV 407
            KL++KAFKD+D  E S+K+IRLRTKQAMLEILLERCRDVSAYTRSRVLQVW ELCEEHSV
Sbjct: 356  KLVSKAFKDID-GEASTKNIRLRTKQAMLEILLERCRDVSAYTRSRVLQVWGELCEEHSV 414

Query: 408  SIGLWNEVAEVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRIASFEATLDQYXXXX 467
            SIGLWNEVAE+AAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLR+ SFEATLDQY    
Sbjct: 415  SIGLWNEVAEIAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRVTSFEATLDQYRKKL 474

Query: 468  XXXXSPSEGSDSENLNGNGEVEDLGIETVTKVQQESMTDTCMSQADDAVPLENSS--SVP 525
                 PSEGSD+EN N +GEV+DL  E V K +QES+TDT MSQ +DA+P++N S  SVP
Sbjct: 475  KEL-EPSEGSDNENSNVDGEVDDLNFEAVEKERQESVTDTFMSQEEDAIPMQNGSDSSVP 533

Query: 526  DVGNLEQTRALVASLEAGSRFSKCIGATMPTLVQLMASSSATDVENTILLLMRCKQFQID 585
            DVGNLEQTRALVASLEAG RFSKCI ATM TLVQLMASSSA+DVENTILLLMRCKQFQID
Sbjct: 534  DVGNLEQTRALVASLEAGLRFSKCIEATMATLVQLMASSSASDVENTILLLMRCKQFQID 593

Query: 586  GSEECLRKMLPLVFSQDKSIYEAVENAFHTIYIRKNPVETAKNLLSLATDSNIGDLAALE 645
            GSEECLRKMLPL FSQDKSI+EAVENAF  IYIRKNP+ETAKNLLSLATDSN GDLAALE
Sbjct: 594  GSEECLRKMLPLAFSQDKSIFEAVENAFRAIYIRKNPMETAKNLLSLATDSNTGDLAALE 653

Query: 646  FIVGALVSKGDISSSTISALWDFFCFNVGGTTAEQSRGALSVLCMVAKKSSGALGSHLQD 705
            FIVG LVSKGDISSSTISALWDFFCFNVGGTTAEQSRGALSVLCMV K S+G LGSHLQD
Sbjct: 654  FIVGTLVSKGDISSSTISALWDFFCFNVGGTTAEQSRGALSVLCMVEKTSTGVLGSHLQD 713

Query: 706  IIDIGFGRWSKVDPLLARTACIAIERLSEDDKKKLLTNNNVRIFGILESIITGFWLPANI 765
            IIDIGFGRWSKVDPLLARTAC+AIERLSEDDK KLL NN+VRIFGIL+S+ITGFWLPANI
Sbjct: 714  IIDIGFGRWSKVDPLLARTACLAIERLSEDDKAKLLANNSVRIFGILDSLITGFWLPANI 773

Query: 766  WYAAADKAITALYAIHPTPETIAADLIKKFLNSVFNXXXXXXXXXXXXMPITVQGEKLSR 825
            WYAAADKAITA+YA+HPTPE IAAD+IKK L+SV+             MPITVQ  KLSR
Sbjct: 774  WYAAADKAITAIYAVHPTPEIIAADMIKKSLSSVYKDCGGSDTDTSSSMPITVQVAKLSR 833

Query: 826  FLFVISHIAMNQLVYIESCARKIQKQKLRKEEKDIQSQTADSNDKESNGTQKGNDINAEL 885
             LFV+SH AMNQLVYIESCARKIQKQKL KE +DI+SQ  DSN   S GTQK NDINAEL
Sbjct: 834  CLFVVSHTAMNQLVYIESCARKIQKQKLAKEREDIESQNTDSNGTASTGTQKDNDINAEL 893

Query: 886  GFAASEDAALDALFEKAEKEIVSGGSNEKNLVGISATFLSKLCRNYGLLQKYPELQASAM 945
            GFAASEDAALDA+FEKAEKEIVSGGS +KNLVGI ATFLSKLCRN+GLLQKYPELQASAM
Sbjct: 894  GFAASEDAALDAMFEKAEKEIVSGGSKDKNLVGICATFLSKLCRNFGLLQKYPELQASAM 953

Query: 946  LALCRLMIIDADFCDANLQLQFTVVENANSETVRSNCTIALGDLAVRFPNLLEPWTENMY 1005
            LALCRLM+IDADFCDANLQL FTVVENA SE VRSNCTIALGDLAVRFPNLLEPWTE MY
Sbjct: 954  LALCRLMVIDADFCDANLQLLFTVVENAQSEIVRSNCTIALGDLAVRFPNLLEPWTEKMY 1013

Query: 1006 ARLGDPCISVRKNAVLVLSHLILNDMMKVKGYINEMAVRLEDEDERISNLAKLFFIELSK 1065
            ARL D  ISVRKNAVLVLSHLILNDMMKVKGYINEMAVRLEDEDERISNLAKLFF+ELSK
Sbjct: 1014 ARLQDTSISVRKNAVLVLSHLILNDMMKVKGYINEMAVRLEDEDERISNLAKLFFLELSK 1073

Query: 1066 KGNNPIYNLLPDILSKLSKQNLSNDSFCNIMQFLIASIKKDRQMEALVEKLCNRFSGATD 1125
            KGNNPIYNLLPDILSKLSKQNLSN+SF NIMQFLIASIKKDRQMEALVEKLCNRFSG TD
Sbjct: 1074 KGNNPIYNLLPDILSKLSKQNLSNESFFNIMQFLIASIKKDRQMEALVEKLCNRFSGVTD 1133

Query: 1126 VRQWQHISYCLSQLSFTEKGMKKLIELFKTYEHVLSEDSVMDHFRNIVNKGKKFAKLEMK 1185
            VRQW+HISYCLSQLSFTEKGMKKLI+LFKTYEH LSEDSVMD+FRNI+NK KKFAKLE+K
Sbjct: 1134 VRQWEHISYCLSQLSFTEKGMKKLIDLFKTYEHALSEDSVMDNFRNILNKAKKFAKLELK 1193

Query: 1186 SCIEEFEDKLNKFHMEKKEQEVTARNAQIHQQKIDSRGGFNVATNSEDHSESNTVSDETD 1245
            + IEEFEDKLNKFHMEKKEQEVTARNAQIHQQKIDSR GFNV  N EDHS SNT S   D
Sbjct: 1194 TYIEEFEDKLNKFHMEKKEQEVTARNAQIHQQKIDSREGFNVNKNYEDHSTSNTSS---D 1250

Query: 1246 SEVIDGCADETDTLSLNGKSQSKHVPEASSGASSELIEPDQVDIEVQSPITKMRGTQRSR 1305
             EVID   + T++LS+NGKS SK VPEASS A SELIE DQVDIEVQSP+ K  G QRSR
Sbjct: 1251 GEVIDTSTEGTNSLSINGKSGSKPVPEASSSALSELIESDQVDIEVQSPMVKTTGAQRSR 1310

Query: 1306 AKKSNVKDGKGDISVSK 1322
              K+NVK  KGDIS+ K
Sbjct: 1311 I-KTNVKGEKGDISIIK 1326


>Medtr2g436590.1 | condensin-2 complex subunit D3 | HC |
            chr2:14240526-14233918 | 20130731
          Length = 1330

 Score = 60.8 bits (146), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 13/158 (8%)

Query: 906  IVSGGSNEK--NLVGISATFLSKLCRNYGLLQKYPELQASAMLALCRLMIIDADFCDANL 963
            I SG S+ K   L+G + +          L Q+ P       L + +L + D       +
Sbjct: 843  ITSGNSDPKLNKLLGPATS----------LQQESPSFYIQGWLTMGKLCLADGKLAKNYI 892

Query: 964  QLQFTVVENANSETVRSNCTIALGDLAVRFPNLLEPWTENMYARLGDPCISVRKNAVLVL 1023
             L    +E A+S  +R+N  + + D  VR+  L++ +   +   L DPC  VR+   ++L
Sbjct: 893  PLFVQELEKADSAALRNNIVVTMADFCVRYTALIDCYITKITRCLLDPCELVRRQTFILL 952

Query: 1024 SHLILNDMMKVKGYIN-EMAVRLEDEDERISNLAKLFF 1060
            S L+  D +K +G +     + L DE E+I  LA   F
Sbjct: 953  SRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLF 990


>Medtr7g110590.1 | condensin-2 complex subunit D3-like protein | HC |
            chr7:45323907-45319269 | 20130731
          Length = 854

 Score = 60.8 bits (146), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 4/157 (2%)

Query: 918  GISATFLSKL-CRNYGLLQKYPELQASAMLALCRLMIIDADFCDANLQLQFTVVENANSE 976
            G S   +SKL C    L Q+ P       L + +L + D       + L    +E A+S 
Sbjct: 403  GRSVPKVSKLPCPTISLQQEAPSFYIQGWLTMGKLCLADGKLAKNYIPLFVQELEKADSA 462

Query: 977  TVRSNCTIALGDLAVRFPNLLEPWTENMYARLGDPCISVRKNAVLVLSHLILNDMMKVKG 1036
             +R+N  +A  D  VR+  L++ +   +   L DPC  VR+   ++LS L+  D +K +G
Sbjct: 463  ALRNNIVVATADFCVRYTALIDCYITKITRCLLDPCELVRRQTFVLLSRLLQRDYVKWRG 522

Query: 1037 YINEMAVRLEDEDERISNLAKLFFIELSKKGNNPIYN 1073
             +  +     DE E+I  LA   F+ L  K     YN
Sbjct: 523  VLF-LRFLFVDESEKIRQLAD--FLTLIIKAPLLAYN 556


>Medtr2g436590.2 | condensin-2 complex subunit D3 | HC |
            chr2:14240526-14233948 | 20130731
          Length = 1010

 Score = 60.8 bits (146), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 13/171 (7%)

Query: 893  AALDALFEKAEKEIVSGGSNEK--NLVGISATFLSKLCRNYGLLQKYPELQASAMLALCR 950
            A + A+       I SG S+ K   L+G + +          L Q+ P       L + +
Sbjct: 830  ADMSAIIPLLHTIITSGNSDPKLNKLLGPATS----------LQQESPSFYIQGWLTMGK 879

Query: 951  LMIIDADFCDANLQLQFTVVENANSETVRSNCTIALGDLAVRFPNLLEPWTENMYARLGD 1010
            L + D       + L    +E A+S  +R+N  + + D  VR+  L++ +   +   L D
Sbjct: 880  LCLADGKLAKNYIPLFVQELEKADSAALRNNIVVTMADFCVRYTALIDCYITKITRCLLD 939

Query: 1011 PCISVRKNAVLVLSHLILNDMMKVKGYIN-EMAVRLEDEDERISNLAKLFF 1060
            PC  VR+   ++LS L+  D +K +G +     + L DE E+I  LA   F
Sbjct: 940  PCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLF 990