Miyakogusa Predicted Gene

Lj0g3v0344639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344639.1 tr|Q5BMC5|Q5BMC5_CYATE Phosphomannose isomerase
OS=Cyamopsis tetragonoloba PE=2
SV=1,79.64,0,MAN6PISMRASE,Mannose-6-phosphate isomerase;
PMI_typeI,Mannose-6-phosphate isomerase, type I; MANNOSE,CUFF.23645.1
         (181 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g007320.1 | mannose-6-phosphate isomerase | HC | chr7:1435...   246   6e-66

>Medtr7g007320.1 | mannose-6-phosphate isomerase | HC |
           chr7:1435684-1430108 | 20130731
          Length = 424

 Score =  246 bits (629), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 120/159 (75%), Positives = 139/159 (87%), Gaps = 2/159 (1%)

Query: 11  HDHLQKLHCSVKNYDWGLPGRVSQVARLFSLNSGSEFDPEEPYAELWMGTLDSGPSFVLS 70
           ++ LQKLHCSVKNYDWGLPG++SQVA+L  LNSG +FDP +PYAELW+GT DSGPSF++S
Sbjct: 7   NNSLQKLHCSVKNYDWGLPGQLSQVAKLSELNSGFKFDPMKPYAELWIGTHDSGPSFLVS 66

Query: 71  NG-AKRATLKAWISENPDVL-GDKVLQKWGADLPFLFKVLSVGKALSIQAHPDKELARTL 128
           +   +R +LK WI +NPD+L G KV++KWG+DLPFLFKVLSVGKALSIQAHPDKELAR L
Sbjct: 67  DDDGQRISLKDWIFDNPDLLLGHKVVKKWGSDLPFLFKVLSVGKALSIQAHPDKELARML 126

Query: 129 HKLLPDMYKDGNHKPEMALAMTDFEALCGFITFKVLDYV 167
           HKL PD+YKDGNHKPEMALAMTDFEALCGFIT K L  V
Sbjct: 127 HKLHPDVYKDGNHKPEMALAMTDFEALCGFITLKELKAV 165