Miyakogusa Predicted Gene

Lj0g3v0344629.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344629.1 Non Characterized Hit- tr|H3GBM2|H3GBM2_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,38.42,2e-19,Metallo-hydrolase/oxidoreductase,NULL;
Lactamase_B_2,NULL; RIBONUCLEASE Z, CHLOROPLAST,NULL;
RIBONUC,CUFF.23675.1
         (176 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g093920.2 | nuclear ribonuclease Z | HC | chr5:41017604-41...   302   1e-82
Medtr5g093920.1 | nuclear ribonuclease Z | HC | chr5:41017604-41...   301   2e-82
Medtr1g033550.1 | nuclear ribonuclease Z | HC | chr1:12114933-12...   298   1e-81
Medtr5g084700.1 | nuclear ribonuclease Z | HC | chr5:36544186-36...   198   2e-51
Medtr5g093920.3 | nuclear ribonuclease Z | HC | chr5:41017604-41...   164   5e-41
Medtr1g033550.2 | nuclear ribonuclease Z | HC | chr1:12114933-12...   161   4e-40

>Medtr5g093920.2 | nuclear ribonuclease Z | HC |
           chr5:41017604-41011915 | 20130731
          Length = 316

 Score =  302 bits (773), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 145/166 (87%), Positives = 154/166 (92%)

Query: 11  GEEFYLRKDLKVKAFRTYHVIPSQGYILYSVRQKLKPEYIGLSGNEIKNLKSSGVEITYT 70
           GEEF LR+DLKVKAFRTYHVIPSQGYILYSV+ KLKPEYIGLSG+EIK LK SGVEIT T
Sbjct: 151 GEEFSLRQDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSGDEIKKLKFSGVEITNT 210

Query: 71  LTEPEIAFTGDTTSEFIVDEKNTDALRAKVLVLECTFVNNSITVEHAKDYGHTHLSEIIS 130
           L EPEIAFTGDT S+FI+DE NTD LRAKVLVLE TFVNN +TVEHA+DYGHTHLSEIIS
Sbjct: 211 LKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLESTFVNNEMTVEHARDYGHTHLSEIIS 270

Query: 131 YADRLQNRAILLIHFSARYTVEEIQQAVCALPPPLAGRTFALTEGF 176
           YAD+LQN+AILLIHFSARYTVEEIQQAV ALPPPLAGRTFALTEGF
Sbjct: 271 YADKLQNKAILLIHFSARYTVEEIQQAVSALPPPLAGRTFALTEGF 316


>Medtr5g093920.1 | nuclear ribonuclease Z | HC |
           chr5:41017604-41011841 | 20130731
          Length = 293

 Score =  301 bits (771), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 145/166 (87%), Positives = 154/166 (92%)

Query: 11  GEEFYLRKDLKVKAFRTYHVIPSQGYILYSVRQKLKPEYIGLSGNEIKNLKSSGVEITYT 70
           GEEF LR+DLKVKAFRTYHVIPSQGYILYSV+ KLKPEYIGLSG+EIK LK SGVEIT T
Sbjct: 128 GEEFSLRQDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSGDEIKKLKFSGVEITNT 187

Query: 71  LTEPEIAFTGDTTSEFIVDEKNTDALRAKVLVLECTFVNNSITVEHAKDYGHTHLSEIIS 130
           L EPEIAFTGDT S+FI+DE NTD LRAKVLVLE TFVNN +TVEHA+DYGHTHLSEIIS
Sbjct: 188 LKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLESTFVNNEMTVEHARDYGHTHLSEIIS 247

Query: 131 YADRLQNRAILLIHFSARYTVEEIQQAVCALPPPLAGRTFALTEGF 176
           YAD+LQN+AILLIHFSARYTVEEIQQAV ALPPPLAGRTFALTEGF
Sbjct: 248 YADKLQNKAILLIHFSARYTVEEIQQAVSALPPPLAGRTFALTEGF 293


>Medtr1g033550.1 | nuclear ribonuclease Z | HC |
           chr1:12114933-12110834 | 20130731
          Length = 335

 Score =  298 bits (764), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/166 (87%), Positives = 152/166 (91%)

Query: 11  GEEFYLRKDLKVKAFRTYHVIPSQGYILYSVRQKLKPEYIGLSGNEIKNLKSSGVEITYT 70
           GEEF LR DLKVKAFRTYHVIPSQGYILYSV+ KLKPEYIGLS +EIK LK SGVEIT T
Sbjct: 170 GEEFSLRHDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSSDEIKKLKFSGVEITNT 229

Query: 71  LTEPEIAFTGDTTSEFIVDEKNTDALRAKVLVLECTFVNNSITVEHAKDYGHTHLSEIIS 130
           L EPEIAFTGDT S+FI+DE NTD LRAKVLVLE TFVNN +TVEHA+DYGHTHLSEIIS
Sbjct: 230 LKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLESTFVNNEMTVEHARDYGHTHLSEIIS 289

Query: 131 YADRLQNRAILLIHFSARYTVEEIQQAVCALPPPLAGRTFALTEGF 176
           YADRLQN+AILLIHFSARYTVEEIQQAV ALPPPLAGRTFALTEGF
Sbjct: 290 YADRLQNKAILLIHFSARYTVEEIQQAVGALPPPLAGRTFALTEGF 335


>Medtr5g084700.1 | nuclear ribonuclease Z | HC |
           chr5:36544186-36548259 | 20130731
          Length = 357

 Score =  198 bits (504), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 92/166 (55%), Positives = 126/166 (75%)

Query: 11  GEEFYLRKDLKVKAFRTYHVIPSQGYILYSVRQKLKPEYIGLSGNEIKNLKSSGVEITYT 70
           GE + +R DL V+ FRT HVIPSQGYI+YS+R+KL+ +Y  L+G +I+ LK SGVEIT T
Sbjct: 187 GETYEIRNDLVVRPFRTQHVIPSQGYIVYSIRKKLRKQYSHLNGKQIEKLKKSGVEITDT 246

Query: 71  LTEPEIAFTGDTTSEFIVDEKNTDALRAKVLVLECTFVNNSITVEHAKDYGHTHLSEIIS 130
           +  PE+AFTGDTTS+F++D  N DALRAKVL+ E TF+++S TVEHA+ +GHTH+SE+I 
Sbjct: 247 ILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEATFLDDSTTVEHARQHGHTHISELIE 306

Query: 131 YADRLQNRAILLIHFSARYTVEEIQQAVCALPPPLAGRTFALTEGF 176
            A  ++N+ +LL HFS+RY +E+I+QA   L    + +   LTEGF
Sbjct: 307 NAQWIRNKTVLLTHFSSRYNIEDIRQAASELQSKTSAKVVPLTEGF 352


>Medtr5g093920.3 | nuclear ribonuclease Z | HC |
           chr5:41017604-41011841 | 20130731
          Length = 247

 Score =  164 bits (414), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 80/95 (84%), Positives = 85/95 (89%)

Query: 10  AGEEFYLRKDLKVKAFRTYHVIPSQGYILYSVRQKLKPEYIGLSGNEIKNLKSSGVEITY 69
            GEEF LR+DLKVKAFRTYHVIPSQGYILYSV+ KLKPEYIGLSG+EIK LK SGVEIT 
Sbjct: 127 VGEEFSLRQDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSGDEIKKLKFSGVEITN 186

Query: 70  TLTEPEIAFTGDTTSEFIVDEKNTDALRAKVLVLE 104
           TL EPEIAFTGDT S+FI+DE NTD LRAKVLVLE
Sbjct: 187 TLKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLE 221


>Medtr1g033550.2 | nuclear ribonuclease Z | HC |
           chr1:12114933-12112581 | 20130731
          Length = 289

 Score =  161 bits (407), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 79/95 (83%), Positives = 83/95 (87%)

Query: 10  AGEEFYLRKDLKVKAFRTYHVIPSQGYILYSVRQKLKPEYIGLSGNEIKNLKSSGVEITY 69
            GEEF LR DLKVKAFRTYHVIPSQGYILYSV+ KLKPEYIGLS +EIK LK SGVEIT 
Sbjct: 169 VGEEFSLRHDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSSDEIKKLKFSGVEITN 228

Query: 70  TLTEPEIAFTGDTTSEFIVDEKNTDALRAKVLVLE 104
           TL EPEIAFTGDT S+FI+DE NTD LRAKVLVLE
Sbjct: 229 TLKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLE 263