Miyakogusa Predicted Gene

Lj0g3v0344319.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344319.4 tr|Q9SJZ7|Q9SJZ7_ARATH Molecular chaperone DnaJ
OS=Arabidopsis thaliana GN=At2g22360 PE=3
SV=2,45.19,0.00000000000002,no description,Heat shock protein DnaJ,
N-terminal,CUFF.23623.4
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g087030.1 | molecular chaperone Hsp40/DnaJ family protein ...   139   5e-34
Medtr3g087030.2 | molecular chaperone Hsp40/DnaJ family protein ...   139   5e-34

>Medtr3g087030.1 | molecular chaperone Hsp40/DnaJ family protein |
           HC | chr3:39461674-39456581 | 20130731
          Length = 438

 Score =  139 bits (350), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 85/102 (83%), Gaps = 2/102 (1%)

Query: 1   MAITPLGSTSASQWGVRPQLLLRSSLTGKGASSSHNVTTRVSFMAAPSSSFLSPDSLHIL 60
           MA+TP GSTSA+QWG+RPQ++ RS+   K ASS HN T+R+SFMAAPSS+F + DSLH  
Sbjct: 1   MAVTPFGSTSATQWGIRPQIVARSTTIAKFASSRHNATSRISFMAAPSSTFFARDSLH-- 58

Query: 61  FNAGLYQSLKCRKGSRLIVRANTDYYSVLGVSRNASKSEIKS 102
           FN G +Q+L  R+GSRLIVRA+ DYY+VLGVS+N++KSEIK+
Sbjct: 59  FNIGSHQTLHRRRGSRLIVRADADYYTVLGVSKNSTKSEIKT 100


>Medtr3g087030.2 | molecular chaperone Hsp40/DnaJ family protein |
           HC | chr3:39462154-39456572 | 20130731
          Length = 438

 Score =  139 bits (350), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 85/102 (83%), Gaps = 2/102 (1%)

Query: 1   MAITPLGSTSASQWGVRPQLLLRSSLTGKGASSSHNVTTRVSFMAAPSSSFLSPDSLHIL 60
           MA+TP GSTSA+QWG+RPQ++ RS+   K ASS HN T+R+SFMAAPSS+F + DSLH  
Sbjct: 1   MAVTPFGSTSATQWGIRPQIVARSTTIAKFASSRHNATSRISFMAAPSSTFFARDSLH-- 58

Query: 61  FNAGLYQSLKCRKGSRLIVRANTDYYSVLGVSRNASKSEIKS 102
           FN G +Q+L  R+GSRLIVRA+ DYY+VLGVS+N++KSEIK+
Sbjct: 59  FNIGSHQTLHRRRGSRLIVRADADYYTVLGVSKNSTKSEIKT 100