Miyakogusa Predicted Gene

Lj0g3v0344269.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344269.1 Non Characterized Hit- tr|I3SH91|I3SH91_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,59.74,4e-19,Yos1,Yos1-like; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Yos1-like,CUFF.23617.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g019160.1 | Yos1-like protein | HC | chr4:5956061-5952088 ...    95   2e-20
Medtr5g081650.3 | Yos1-like protein | HC | chr5:34985855-3498275...    72   8e-14
Medtr5g081650.2 | Yos1-like protein | HC | chr5:34986430-3498275...    72   8e-14
Medtr5g081650.1 | Yos1-like protein | HC | chr5:34986430-3498275...    72   8e-14
Medtr3g069970.1 | Yos1-like protein | LC | chr3:31323687-3132350...    54   4e-08

>Medtr4g019160.1 | Yos1-like protein | HC | chr4:5956061-5952088 |
           20130731
          Length = 192

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 59/77 (76%)

Query: 1   MGFWTIIEGFILLSNALAILNEDRFLAPRGWGFSDHLDPRTNTVKRKIIGLIYFCQYGRI 60
           MGFWT++EG +L +NALAILNEDRFLA RGW  ++   PR N++K ++IGLIY CQ+ R+
Sbjct: 116 MGFWTLLEGLLLFANALAILNEDRFLARRGWTLAEMTGPRRNSLKGQVIGLIYACQFLRL 175

Query: 61  PLIVINSITIIAKLVFG 77
           PLI+ N I II KL  G
Sbjct: 176 PLILFNIIIIIVKLFSG 192


>Medtr5g081650.3 | Yos1-like protein | HC | chr5:34985855-34982759
          | 20130731
          Length = 77

 Score = 72.4 bits (176), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 41/57 (71%)

Query: 21 NEDRFLAPRGWGFSDHLDPRTNTVKRKIIGLIYFCQYGRIPLIVINSITIIAKLVFG 77
          NEDRFL P+GWG SD    RT + K +IIGLIY  QY R+PLI+ NSI II KLV G
Sbjct: 21 NEDRFLVPKGWGLSDFSGGRTKSFKGQIIGLIYATQYLRVPLILFNSIFIIVKLVSG 77


>Medtr5g081650.2 | Yos1-like protein | HC | chr5:34986430-34982759
          | 20130731
          Length = 77

 Score = 72.4 bits (176), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 41/57 (71%)

Query: 21 NEDRFLAPRGWGFSDHLDPRTNTVKRKIIGLIYFCQYGRIPLIVINSITIIAKLVFG 77
          NEDRFL P+GWG SD    RT + K +IIGLIY  QY R+PLI+ NSI II KLV G
Sbjct: 21 NEDRFLVPKGWGLSDFSGGRTKSFKGQIIGLIYATQYLRVPLILFNSIFIIVKLVSG 77


>Medtr5g081650.1 | Yos1-like protein | HC | chr5:34986430-34982759
          | 20130731
          Length = 77

 Score = 72.4 bits (176), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 41/57 (71%)

Query: 21 NEDRFLAPRGWGFSDHLDPRTNTVKRKIIGLIYFCQYGRIPLIVINSITIIAKLVFG 77
          NEDRFL P+GWG SD    RT + K +IIGLIY  QY R+PLI+ NSI II KLV G
Sbjct: 21 NEDRFLVPKGWGLSDFSGGRTKSFKGQIIGLIYATQYLRVPLILFNSIFIIVKLVSG 77


>Medtr3g069970.1 | Yos1-like protein | LC | chr3:31323687-31323505
          | 20130731
          Length = 60

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/29 (82%), Positives = 27/29 (93%)

Query: 8  EGFILLSNALAILNEDRFLAPRGWGFSDH 36
          EGF+LL NALAILNEDRFLAP+GW FSD+
Sbjct: 28 EGFLLLPNALAILNEDRFLAPKGWWFSDY 56