Miyakogusa Predicted Gene

Lj0g3v0344029.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344029.1 Non Characterized Hit- tr|F6HNL7|F6HNL7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,44.44,0.000000001, ,NODE_15952_length_769_cov_210.232773.path1.1
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g081880.1 | hypothetical protein | HC | chr5:35120653-3511...   128   1e-30

>Medtr5g081880.1 | hypothetical protein | HC |
           chr5:35120653-35114684 | 20130731
          Length = 693

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/106 (64%), Positives = 79/106 (74%), Gaps = 8/106 (7%)

Query: 1   MLYQSILSPRSSSFKEIPQRNSSSHRIAAREKIKRRGDSYQPAIDNLANDSAYMLNLSSA 60
           ML QSILSPRSSSFKE+P RN SSHR+AAREKIKRRGD+   A DN        L+LSS 
Sbjct: 340 MLCQSILSPRSSSFKEVPPRNMSSHRVAAREKIKRRGDTQPLAADN--------LDLSST 391

Query: 61  SDLDKSAEVAKSLTFSSGFLGSHGNLTVPSSLGSGGKFPALVSPLF 106
           SD DK++EV K+L FS  F+GS G  +VPSSLG GG+ P +VSPLF
Sbjct: 392 SDHDKASEVTKTLAFSPSFMGSAGMYSVPSSLGPGGEVPPVVSPLF 437