Miyakogusa Predicted Gene

Lj0g3v0342489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342489.1 Non Characterized Hit- tr|I3T8C9|I3T8C9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.25,0,SUBFAMILY
NOT NAMED,NULL; CELL CYCLE CONTROL PROTEIN 50,Protein of unknown
function DUF284, transmem,CUFF.23492.1
         (343 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g067760.1 | LEM3 (ligand-effect modulator 3) family protei...   558   e-159
Medtr2g067760.2 | LEM3 (ligand-effect modulator 3) family protei...   558   e-159
Medtr2g101400.1 | LEM3 (ligand-effect modulator 3) family protei...   444   e-125
Medtr7g086110.1 | LEM3 (ligand-effect modulator 3) family protei...   426   e-119
Medtr2g451450.1 | LEM3 (ligand-effect modulator 3) family protei...   407   e-114
Medtr2g451450.2 | LEM3 (ligand-effect modulator 3) family protei...   320   1e-87

>Medtr2g067760.1 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:28366151-28371165 | 20130731
          Length = 348

 Score =  558 bits (1437), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 267/333 (80%), Positives = 293/333 (87%), Gaps = 2/333 (0%)

Query: 12  TAATRRQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASRDVVE 71
           + A RR TKRPKYSKFTQQELPACKPILTPRAVISAFL+V++VFIPIGVASL+ASR VVE
Sbjct: 17  STAPRRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSVVFIPIGVASLMASRKVVE 76

Query: 72  IIHRYEADCVPGNWSSDKVGYIQS-SADKTCTREIHVEKRMKSPIYVYYQLDNFYQNHRR 130
           I++ YE+DC+P + + D++ YIQS   DKTC   ++V K MKSPIYVYYQLDNFYQNHRR
Sbjct: 77  IVYGYESDCLP-DGTKDEIAYIQSPETDKTCNITLNVTKHMKSPIYVYYQLDNFYQNHRR 135

Query: 131 YVKSRNDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTYSFSRNNNNLTVN 190
           YVKSR+DEQLR     NS S CKPED  N   I+PCGLIAWS+FNDTYSFS NN NLTVN
Sbjct: 136 YVKSRSDEQLRSRKGENSVSACKPEDTANNRSIVPCGLIAWSLFNDTYSFSVNNTNLTVN 195

Query: 191 KKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTFRK 250
           KK ISWKSDREHKFG DVFPKNFQNG+IIGGA LNE+IPL+EQEDLIVWMRTAALPTFRK
Sbjct: 196 KKDISWKSDREHKFGKDVFPKNFQNGSIIGGAQLNESIPLNEQEDLIVWMRTAALPTFRK 255

Query: 251 LYGKIEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLS 310
           LYGKIE+DL +GD+I V L+NNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGL 
Sbjct: 256 LYGKIEVDLNQGDLIDVTLKNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLC 315

Query: 311 FFLSMVFTIVYFVKPRQLGDPSYLSWNRNPGGH 343
           FFLS+ FTIVYFVKPRQLGDPSYLSWNRN GGH
Sbjct: 316 FFLSLAFTIVYFVKPRQLGDPSYLSWNRNQGGH 348


>Medtr2g067760.2 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:28366151-28371165 | 20130731
          Length = 348

 Score =  558 bits (1437), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 267/333 (80%), Positives = 293/333 (87%), Gaps = 2/333 (0%)

Query: 12  TAATRRQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASRDVVE 71
           + A RR TKRPKYSKFTQQELPACKPILTPRAVISAFL+V++VFIPIGVASL+ASR VVE
Sbjct: 17  STAPRRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSVVFIPIGVASLMASRKVVE 76

Query: 72  IIHRYEADCVPGNWSSDKVGYIQS-SADKTCTREIHVEKRMKSPIYVYYQLDNFYQNHRR 130
           I++ YE+DC+P + + D++ YIQS   DKTC   ++V K MKSPIYVYYQLDNFYQNHRR
Sbjct: 77  IVYGYESDCLP-DGTKDEIAYIQSPETDKTCNITLNVTKHMKSPIYVYYQLDNFYQNHRR 135

Query: 131 YVKSRNDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTYSFSRNNNNLTVN 190
           YVKSR+DEQLR     NS S CKPED  N   I+PCGLIAWS+FNDTYSFS NN NLTVN
Sbjct: 136 YVKSRSDEQLRSRKGENSVSACKPEDTANNRSIVPCGLIAWSLFNDTYSFSVNNTNLTVN 195

Query: 191 KKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTFRK 250
           KK ISWKSDREHKFG DVFPKNFQNG+IIGGA LNE+IPL+EQEDLIVWMRTAALPTFRK
Sbjct: 196 KKDISWKSDREHKFGKDVFPKNFQNGSIIGGAQLNESIPLNEQEDLIVWMRTAALPTFRK 255

Query: 251 LYGKIEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLS 310
           LYGKIE+DL +GD+I V L+NNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGL 
Sbjct: 256 LYGKIEVDLNQGDLIDVTLKNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLC 315

Query: 311 FFLSMVFTIVYFVKPRQLGDPSYLSWNRNPGGH 343
           FFLS+ FTIVYFVKPRQLGDPSYLSWNRN GGH
Sbjct: 316 FFLSLAFTIVYFVKPRQLGDPSYLSWNRNQGGH 348


>Medtr2g101400.1 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:43597997-43601669 | 20130731
          Length = 347

 Score =  444 bits (1141), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 211/343 (61%), Positives = 267/343 (77%), Gaps = 4/343 (1%)

Query: 1   MATPSAGSNDPTAATRRQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGV 60
           M +   G + P   +++ +K+PKYSKF+QQELPA KPILTP  VI+ F  + I+FIPIG+
Sbjct: 4   MTSSKDGQSPPN--SKKTSKKPKYSKFSQQELPAWKPILTPGWVIATFTAIGIIFIPIGL 61

Query: 61  ASLIASRDVVEIIHRYEADCVPGNWSSDKVGYIQS-SADKTCTREIHVEKRMKSPIYVYY 119
           ASL +S  VVE   RY+  C+  + + D V YI+S + +KTCT +  VE++M++P+++YY
Sbjct: 62  ASLFSSGKVVEAEFRYDETCLSPDVAKDAVAYIKSDTTNKTCTHKWIVEQKMQAPVFIYY 121

Query: 120 QLDNFYQNHRRYVKSRNDEQLRDSSKANSSSGCKPEDYVNG-VPILPCGLIAWSMFNDTY 178
           QL+N+YQNHRRYVKSRND+QL   S    +  C P D   G  PI+PCGLIAWSMFNDTY
Sbjct: 122 QLENYYQNHRRYVKSRNDKQLWRKSAELQTDHCDPVDKTEGKEPIVPCGLIAWSMFNDTY 181

Query: 179 SFSRNNNNLTVNKKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIV 238
            FS +N +LT+NKK I+W SD+  KFG +V+PKNFQ+G +IGGA LNE++PLSEQEDLIV
Sbjct: 182 KFSIDNKDLTINKKNIAWGSDKNSKFGHEVYPKNFQSGGLIGGAKLNESVPLSEQEDLIV 241

Query: 239 WMRTAALPTFRKLYGKIEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDF 298
           WMRTAALPTFRKLYGKIE DLE  D I++++QNNYNTY F G+KKLVLSTT+W+GGKN F
Sbjct: 242 WMRTAALPTFRKLYGKIESDLEVNDEIEILIQNNYNTYEFQGRKKLVLSTTTWIGGKNRF 301

Query: 299 LGIAYLTVGGLSFFLSMVFTIVYFVKPRQLGDPSYLSWNRNPG 341
           LG+AYL VGGLS F ++ F ++Y VKPR LGDPSYLSWNRNPG
Sbjct: 302 LGVAYLCVGGLSLFCAIGFILLYVVKPRPLGDPSYLSWNRNPG 344


>Medtr7g086110.1 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr7:33402566-33400955 | 20130731
          Length = 326

 Score =  426 bits (1096), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/318 (62%), Positives = 250/318 (78%), Gaps = 3/318 (0%)

Query: 25  SKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASRDVVEIIHRYEADCVPGN 84
           S+F+QQEL A +PILTP  VI+ F  + +VFIPIGVASL AS  VVE+  RY+  C+P  
Sbjct: 4   SRFSQQELHAWQPILTPGWVIAIFTFIGLVFIPIGVASLFASEQVVEVPLRYDDQCLPSL 63

Query: 85  WSSDKVGYIQSS-ADKTCTREIHVEKRMKSPIYVYYQLDNFYQNHRRYVKSRNDEQLRDS 143
           +  D + YI+ +   KTCT+++ V+ +MK+PIYVYYQL NFYQNHR YVKSR+ +QLR  
Sbjct: 64  YKDDAMTYIKGNRISKTCTKKLTVKSKMKAPIYVYYQLSNFYQNHRHYVKSRDHKQLRSK 123

Query: 144 SKANSSSGCKPEDY-VNG-VPILPCGLIAWSMFNDTYSFSRNNNNLTVNKKGISWKSDRE 201
           +  N    C PEDY  NG +P++PCGL AWS+FNDTY FS NN +L +NKK I+WKSD++
Sbjct: 124 ADENDVGKCFPEDYTANGYLPVVPCGLAAWSLFNDTYRFSNNNKDLVINKKNIAWKSDQK 183

Query: 202 HKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTFRKLYGKIEMDLEK 261
            KFG DV+PKNFQ G++IGGA LNE+IPLSEQEDLIVWMRTAALPTFRKLYGKIE+DLE 
Sbjct: 184 AKFGSDVYPKNFQTGSLIGGARLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEVDLEA 243

Query: 262 GDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLSFFLSMVFTIVY 321
            D I VV++NNYNTY F G K ++LSTT+W+GGKNDFLGIAY+ +GGLS   S+VF ++Y
Sbjct: 244 NDEITVVIENNYNTYQFGGTKSVILSTTTWIGGKNDFLGIAYILIGGLSLVYSLVFLLMY 303

Query: 322 FVKPRQLGDPSYLSWNRN 339
            +KPR LGDP YL+WN+N
Sbjct: 304 LMKPRPLGDPRYLTWNKN 321


>Medtr2g451450.1 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:22857320-22850942 | 20130731
          Length = 331

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 192/311 (61%), Positives = 239/311 (76%), Gaps = 1/311 (0%)

Query: 17  RQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASRDVVEIIHRY 76
           R  +     +FTQQ LPACKP+LTP+AVI+ FL++ +VFIP+G+ +L AS  VVEI+ RY
Sbjct: 21  RPARHGALYQFTQQSLPACKPVLTPKAVIATFLLMGLVFIPVGLVTLRASYSVVEIVDRY 80

Query: 77  EADCVPGNWSSDKVGYIQS-SADKTCTREIHVEKRMKSPIYVYYQLDNFYQNHRRYVKSR 135
           + DCVP  + S+KV Y++  S  K C+R + V K M++PIY+YYQLDN+YQNHRRYVKSR
Sbjct: 81  DIDCVPEEYRSNKVAYVKDDSISKNCSRFLKVPKSMRAPIYIYYQLDNYYQNHRRYVKSR 140

Query: 136 NDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTYSFSRNNNNLTVNKKGIS 195
           +D+QL      N +S C+P +  N +PI+PCGLIAWS+FNDT+ F R  + L VN+K I+
Sbjct: 141 SDQQLLHGLGYNDTSPCRPLESSNDLPIVPCGLIAWSLFNDTFKFRRGPSELKVNRKDIA 200

Query: 196 WKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTFRKLYGKI 255
           WKSDR HKFG  V+P NFQNGT  GGA L+ +IPLS+QEDLIVWMRTAALPTFRKLYGKI
Sbjct: 201 WKSDRNHKFGKQVYPFNFQNGTFTGGAKLDPSIPLSDQEDLIVWMRTAALPTFRKLYGKI 260

Query: 256 EMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLSFFLSM 315
           E DL+  DVI V L+NNYNTYSF GKKKLVLST+SWLGGKNDFLGIA L VG  S  +S+
Sbjct: 261 EEDLDADDVIVVNLKNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGIANLFVGTFSILISI 320

Query: 316 VFTIVYFVKPR 326
           VF +++   PR
Sbjct: 321 VFLVLHMKSPR 331


>Medtr2g451450.2 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:22853645-22850321 | 20130731
          Length = 233

 Score =  320 bits (820), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 151/228 (66%), Positives = 181/228 (79%)

Query: 111 MKSPIYVYYQLDNFYQNHRRYVKSRNDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIA 170
           M++PIY+YYQLDN+YQNHRRYVKSR+D+QL      N +S C+P +  N +PI+PCGLIA
Sbjct: 1   MRAPIYIYYQLDNYYQNHRRYVKSRSDQQLLHGLGYNDTSPCRPLESSNDLPIVPCGLIA 60

Query: 171 WSMFNDTYSFSRNNNNLTVNKKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPL 230
           WS+FNDT+ F R  + L VN+K I+WKSDR HKFG  V+P NFQNGT  GGA L+ +IPL
Sbjct: 61  WSLFNDTFKFRRGPSELKVNRKDIAWKSDRNHKFGKQVYPFNFQNGTFTGGAKLDPSIPL 120

Query: 231 SEQEDLIVWMRTAALPTFRKLYGKIEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTS 290
           S+QEDLIVWMRTAALPTFRKLYGKIE DL+  DVI V L+NNYNTYSF GKKKLVLST+S
Sbjct: 121 SDQEDLIVWMRTAALPTFRKLYGKIEEDLDADDVIVVNLKNNYNTYSFGGKKKLVLSTSS 180

Query: 291 WLGGKNDFLGIAYLTVGGLSFFLSMVFTIVYFVKPRQLGDPSYLSWNR 338
           WLGGKNDFLGIA L VG  S  +S+VF +++   PR  GD +Y SWN+
Sbjct: 181 WLGGKNDFLGIANLFVGTFSILISIVFLVLHMKSPRPYGDTAYSSWNK 228