Miyakogusa Predicted Gene

Lj0g3v0342159.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342159.1 Non Characterized Hit- tr|I1LX42|I1LX42_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53128
PE,59.65,6e-19,seg,NULL,CUFF.23447.1
         (131 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g018800.1 | hypothetical protein | HC | chr6:7268429-72650...   120   4e-28

>Medtr6g018800.1 | hypothetical protein | HC | chr6:7268429-7265038
           | 20130731
          Length = 130

 Score =  120 bits (300), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 84/126 (66%), Gaps = 13/126 (10%)

Query: 12  AAMASSLCLQPNFNPKGVTKDQLSKFRELHRKRLQLXXXXXXXXXXXXXDVTNKKFQGYD 71
           AA++S+ CLQPNFNPKGV++DQLSKFRELH+KRLQL                  +  G D
Sbjct: 12  AAISSTPCLQPNFNPKGVSQDQLSKFRELHKKRLQLKSKSKFKTKQKDDTKKKAR--GND 69

Query: 72  LSSQSSEAQGLKIDDK------DGECSDSQNTDSKGGGVLVPSSSKKQKLHWGLDTKERW 125
           + S++S AQG KID+K      + E  DS+N DSKGG      +SKK KLHWGLDTKERW
Sbjct: 70  VYSENS-AQGFKIDNKEQSLLNNCESFDSKNEDSKGGIF----ASKKPKLHWGLDTKERW 124

Query: 126 ERKSNM 131
           ERKSNM
Sbjct: 125 ERKSNM 130