Miyakogusa Predicted Gene

Lj0g3v0341989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341989.1 Non Characterized Hit- tr|F0ZYG2|F0ZYG2_DICPU
Putative uncharacterized protein OS=Dictyostelium
purp,30.86,3e-19,Mpv17_PMP22,Mpv17/PMP22; PEROXISOMAL MEMBRANE PROTEIN
2, PXMP2 (MPV17),Mpv17/PMP22,CUFF.23437.1
         (185 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g075540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...   292   1e-79
Medtr1g075540.3 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...   292   1e-79
Medtr1g075540.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...   292   1e-79
Medtr1g075540.4 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...   275   2e-74
Medtr2g023850.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...   229   2e-60
Medtr6g038540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    59   2e-09
Medtr1g008350.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    56   1e-08
Medtr8g103490.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    53   2e-07
Medtr1g106775.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    53   2e-07
Medtr7g088590.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    51   5e-07
Medtr7g088590.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    50   1e-06

>Medtr1g075540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr1:33457614-33453019 | 20130731
          Length = 187

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 139/187 (74%), Positives = 157/187 (83%), Gaps = 2/187 (1%)

Query: 1   MSDIVNDALKKYLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXYG 60
           MSD VNDA  KYL QL+LHPLRTKA T++ L GFSDAVAQK++GAKK           YG
Sbjct: 1   MSDKVNDAWNKYLLQLKLHPLRTKAITSSVLVGFSDAVAQKISGAKKLQFRRILLFMLYG 60

Query: 61  FAYSGPFGHFLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPW 120
           FAYSGPFGH+LH LMDK+FKGK GNETVAKKVILEQITSSPWNNF FMMYYGLVIEGRP 
Sbjct: 61  FAYSGPFGHYLHLLMDKLFKGKKGNETVAKKVILEQITSSPWNNFFFMMYYGLVIEGRPL 120

Query: 121 SMVINKVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRART- 179
           ++V+NKVK DYP+VQL AWKFWP+VGWVNYQYMP+QFRV+FH+FV +CW IFLNL+AR+ 
Sbjct: 121 NIVMNKVKNDYPAVQLMAWKFWPIVGWVNYQYMPLQFRVLFHNFVGSCWAIFLNLKARSS 180

Query: 180 -VAIKKA 185
              IKKA
Sbjct: 181 VAIIKKA 187


>Medtr1g075540.3 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr1:33457294-33453001 | 20130731
          Length = 187

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 139/187 (74%), Positives = 157/187 (83%), Gaps = 2/187 (1%)

Query: 1   MSDIVNDALKKYLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXYG 60
           MSD VNDA  KYL QL+LHPLRTKA T++ L GFSDAVAQK++GAKK           YG
Sbjct: 1   MSDKVNDAWNKYLLQLKLHPLRTKAITSSVLVGFSDAVAQKISGAKKLQFRRILLFMLYG 60

Query: 61  FAYSGPFGHFLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPW 120
           FAYSGPFGH+LH LMDK+FKGK GNETVAKKVILEQITSSPWNNF FMMYYGLVIEGRP 
Sbjct: 61  FAYSGPFGHYLHLLMDKLFKGKKGNETVAKKVILEQITSSPWNNFFFMMYYGLVIEGRPL 120

Query: 121 SMVINKVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRART- 179
           ++V+NKVK DYP+VQL AWKFWP+VGWVNYQYMP+QFRV+FH+FV +CW IFLNL+AR+ 
Sbjct: 121 NIVMNKVKNDYPAVQLMAWKFWPIVGWVNYQYMPLQFRVLFHNFVGSCWAIFLNLKARSS 180

Query: 180 -VAIKKA 185
              IKKA
Sbjct: 181 VAIIKKA 187


>Medtr1g075540.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr1:33457354-33453221 | 20130731
          Length = 187

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 139/187 (74%), Positives = 157/187 (83%), Gaps = 2/187 (1%)

Query: 1   MSDIVNDALKKYLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXYG 60
           MSD VNDA  KYL QL+LHPLRTKA T++ L GFSDAVAQK++GAKK           YG
Sbjct: 1   MSDKVNDAWNKYLLQLKLHPLRTKAITSSVLVGFSDAVAQKISGAKKLQFRRILLFMLYG 60

Query: 61  FAYSGPFGHFLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPW 120
           FAYSGPFGH+LH LMDK+FKGK GNETVAKKVILEQITSSPWNNF FMMYYGLVIEGRP 
Sbjct: 61  FAYSGPFGHYLHLLMDKLFKGKKGNETVAKKVILEQITSSPWNNFFFMMYYGLVIEGRPL 120

Query: 121 SMVINKVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRART- 179
           ++V+NKVK DYP+VQL AWKFWP+VGWVNYQYMP+QFRV+FH+FV +CW IFLNL+AR+ 
Sbjct: 121 NIVMNKVKNDYPAVQLMAWKFWPIVGWVNYQYMPLQFRVLFHNFVGSCWAIFLNLKARSS 180

Query: 180 -VAIKKA 185
              IKKA
Sbjct: 181 VAIIKKA 187


>Medtr1g075540.4 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr1:33457454-33453262 | 20130731
          Length = 169

 Score =  275 bits (703), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 128/169 (75%), Positives = 144/169 (85%)

Query: 1   MSDIVNDALKKYLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXYG 60
           MSD VNDA  KYL QL+LHPLRTKA T++ L GFSDAVAQK++GAKK           YG
Sbjct: 1   MSDKVNDAWNKYLLQLKLHPLRTKAITSSVLVGFSDAVAQKISGAKKLQFRRILLFMLYG 60

Query: 61  FAYSGPFGHFLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPW 120
           FAYSGPFGH+LH LMDK+FKGK GNETVAKKVILEQITSSPWNNF FMMYYGLVIEGRP 
Sbjct: 61  FAYSGPFGHYLHLLMDKLFKGKKGNETVAKKVILEQITSSPWNNFFFMMYYGLVIEGRPL 120

Query: 121 SMVINKVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACW 169
           ++V+NKVK DYP+VQL AWKFWP+VGWVNYQYMP+QFRV+FH+FV +CW
Sbjct: 121 NIVMNKVKNDYPAVQLMAWKFWPIVGWVNYQYMPLQFRVLFHNFVGSCW 169


>Medtr2g023850.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr2:8451876-8458201 | 20130731
          Length = 185

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 102/185 (55%), Positives = 134/185 (72%)

Query: 1   MSDIVNDALKKYLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXYG 60
           MS +  + L  Y++QLQ HPLRTK  TA  L+G SD V+QK+ G +K            G
Sbjct: 1   MSSVAKNGLNSYVKQLQEHPLRTKVITAGVLSGISDIVSQKLTGIQKLQVKRLLLKVLLG 60

Query: 61  FAYSGPFGHFLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPW 120
             Y GPFGH+ H +++KIFKGK  ++TV K+V++EQ+TSSP NN +FM+YYGLVIEG+PW
Sbjct: 61  AGYLGPFGHYFHIILEKIFKGKKDSKTVIKRVLIEQLTSSPLNNLIFMIYYGLVIEGQPW 120

Query: 121 SMVINKVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRARTV 180
             V  +VKK YPSVQ  +W FWPVVGW+NY++MP+ FRV+FHS VA  WGIFLNLRAR++
Sbjct: 121 VNVKARVKKGYPSVQKASWTFWPVVGWINYKFMPLHFRVVFHSLVAFVWGIFLNLRARSM 180

Query: 181 AIKKA 185
            + K+
Sbjct: 181 TLTKS 185


>Medtr6g038540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr6:13814332-13819860 | 20130731
          Length = 244

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 5/169 (2%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQ--KMAGAKKXXXXXXXXXXXYGFAYSGPFGH 69
           YLR+L+ +P+ TK  T++ +   +D  +Q   +  +             YG    GP  H
Sbjct: 56  YLRKLETYPVLTKCITSSLIFTAADLTSQMITLPSSASYDLKRTSRMTIYGLLILGPSQH 115

Query: 70  FLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWSMVINKVKK 129
                + KI   +    T+ KK+++ Q    P  N +F  Y G  ++G     ++ ++K+
Sbjct: 116 KYFNFLSKILPNRDVATTL-KKILMGQALFGPVINTVFFSYIG-ALQGESGPEIVARLKR 173

Query: 130 DYPSVQLTAWKFWPVVGWVNYQYMPMQFR-VIFHSFVAACWGIFLNLRA 177
           D     +    FWPV  +V ++++P+  +  I  S ++ C  +  ++ A
Sbjct: 174 DLLPTLIGGAMFWPVCDFVTFKFVPVHLQYFIEMSSLSVCPSLEYSIEA 222


>Medtr1g008350.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr1:861041-865731 | 20130731
          Length = 214

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 25/187 (13%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQ-------KMAGAK------------KXXXXX 52
           Y   L +HP++T+  ++ F+ G  D  AQ       K  G              K     
Sbjct: 8   YQNCLAVHPVKTQVISSGFIWGAGDVAAQYVTHYTAKTRGVTNESHSQDDKKEFKINWKR 67

Query: 53  XXXXXXYGFAYSGPFGHFLHKLMDKIFKGK-----TGNETVAKKVILEQITSSPWNNFLF 107
                 +G A+ GP GH+ ++ +DK  + +          VA KV  +     P +  +F
Sbjct: 68  VSTTSLFGLAFVGPVGHYWYEGLDKFIRHRLLLKPNSFRFVAAKVGADGFLFGPLDLLVF 127

Query: 108 MMYYGLVIEGRPWSMVINKVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAA 167
             Y G    G+    +   VK+D+    +     WPVV   N++Y+P+++++++ +F   
Sbjct: 128 FTYMGFST-GKSVPQIKEDVKRDFLPALILEGGIWPVVQVANFRYVPVRYQLLYVNFFCL 186

Query: 168 CWGIFLN 174
               FL+
Sbjct: 187 LDSCFLS 193


>Medtr8g103490.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr8:43543333-43545462 | 20130731
          Length = 226

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 28/177 (15%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQ----------------KMAGAKKXXX----- 50
           Y   L +HP+RT+  T+  L    D  AQ                +++  K         
Sbjct: 11  YQNSLSVHPVRTQVATSGVLWAVGDVTAQYITHSAAASSSSKKRLQLSATKAADDKFVID 70

Query: 51  -XXXXXXXXYGFAYSGPFGHFLHKLMDKIFKGK-----TGNETVAKKVILEQITSSPWNN 104
                    +G  + GP GHF ++ ++K    K         +VA KV ++ +   P + 
Sbjct: 71  WRRVAVTSMFGVGFVGPVGHFWYEGLEKFISHKLQLMPQTARSVATKVAMDGLIFGPVHL 130

Query: 105 FLFMMYYGLVIEGRPWSMVINKVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIF 161
           F+F  Y GL   G+    V   +K++Y    +     WP+V   N++Y+P+++++++
Sbjct: 131 FVFFSYMGLS-AGKTIPEVKEDLKRNYFPALVLEGGVWPIVQVFNFRYVPVKYQLLY 186


>Medtr1g106775.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr1:48311526-48306713 | 20130731
          Length = 259

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 4/168 (2%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMA--GAKKXXXXXXXXXXXYGFAYSGPFGH 69
           YL  ++  P+ TK+ T+A +   +D  +Q +    +K            YG    GP  H
Sbjct: 85  YLGMIKSRPILTKSVTSALIYTAADLSSQTIERQSSKSFDFIRTLRMAGYGMIILGPSLH 144

Query: 70  FLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWSMVINKVKK 129
           F    + K+F G+    T+ K  + + I         F +  GL  +G     ++ ++K+
Sbjct: 145 FWFNFVSKLFPGRDIFSTLKKMAMGQGIYGPAMTVIFFSLNAGL--QGENSKEIVARLKR 202

Query: 130 DYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRA 177
           D     L    +WP+  ++ +++ P+  + +  +  +  W I++   A
Sbjct: 203 DLLPTMLNGVMYWPMCDFITFRFAPVHLQPLVSNSFSYLWTIYMTYMA 250


>Medtr7g088590.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr7:34521820-34525349 | 20130731
          Length = 245

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXY-GFAYSGPFGHF 70
           Y+  L  +P+  KA T+A L    D + Q +    +           + G    GP  HF
Sbjct: 97  YMALLAKYPVPVKALTSAILNLIGDLICQLVIDKVQTPDLKRTFLFSFLGLVLVGPTLHF 156

Query: 71  LHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLV-IEGRPWSMVINKVKK 129
            +  + ++     G      +++L+Q   SP   FL +    LV +EGRP S  + K+K+
Sbjct: 157 WYLYLSQLVT-LPGTSGAILRLVLDQFVFSP--IFLGVFLSSLVTLEGRP-SQAVPKLKQ 212

Query: 130 DYPSVQLTAWKFWPVVGWVNYQYMPMQFRV 159
           ++ S  L  W+ W    ++N++++P QF++
Sbjct: 213 EWFSAVLANWQLWIPFQFLNFRFVPQQFQI 242


>Medtr7g088590.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr7:34521931-34525157 | 20130731
          Length = 257

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXY-GFAYSGPFGHF 70
           Y+  L  +P+  KA T+A L    D + Q +    +           + G    GP  HF
Sbjct: 97  YMALLAKYPVPVKALTSAILNLIGDLICQLVIDKVQTPDLKRTFLFSFLGLVLVGPTLHF 156

Query: 71  LHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLV-IEGRPWSMVINKVKK 129
            +  + ++     G      +++L+Q   SP   FL +    LV +EGRP S  + K+K+
Sbjct: 157 WYLYLSQLVT-LPGTSGAILRLVLDQFVFSP--IFLGVFLSSLVTLEGRP-SQAVPKLKQ 212

Query: 130 DYPSVQLTAWKFWPVVGWVNYQYMPMQFRV 159
           ++ S  L  W+ W    ++N++++P QF++
Sbjct: 213 EWFSAVLANWQLWIPFQFLNFRFVPQQFQM 242