Miyakogusa Predicted Gene

Lj0g3v0341829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341829.1 tr|G5B5W3|G5B5W3_HETGA Alanyl-tRNA synthetase,
cytoplasmic OS=Heterocephalus glaber GN=GW7_15460
PE=,41.46,3e-19,tRNA-synt_2c,Alanyl-tRNA synthetase, class IIc,
N-terminal; SUBFAMILY NOT NAMED,Alanine-tRNA ligase,,CUFF.23424.1
         (147 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g074640.1 | alanine-tRNA ligase | HC | chr4:28430949-28445...   257   3e-69

>Medtr4g074640.1 | alanine-tRNA ligase | HC | chr4:28430949-28445218
           | 20130731
          Length = 950

 Score =  257 bits (656), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 126/147 (85%), Positives = 135/147 (91%)

Query: 1   MAEEKGLLVDVEGFNSAMEAARERSRNAQTKQAGGAIVMDADATSALHKKGILPTDDSFK 60
           MAEEK L VDVEGFNSAMEAARERSR AQ KQAGGAIVMDADATSAL K+ I+PTDDSFK
Sbjct: 432 MAEEKKLKVDVEGFNSAMEAARERSRTAQNKQAGGAIVMDADATSALQKRSIVPTDDSFK 491

Query: 61  YVWFKDHQSGVKAIYTGSEFVDSVNTDGDIGVILESTSFYAEQGGQIFDTGSLECQHASF 120
           +  F+DH++ VKAIYTGSEFVDSVNTDGD+GVILESTSFYAEQGGQIFDTGSL+  HASF
Sbjct: 492 FASFRDHETVVKAIYTGSEFVDSVNTDGDVGVILESTSFYAEQGGQIFDTGSLDFHHASF 551

Query: 121 QVRNVQVFGGFVLHIGNGTGISVGDKV 147
           QV NVQV+GGFVLHIGNGTGISVGDKV
Sbjct: 552 QVHNVQVYGGFVLHIGNGTGISVGDKV 578