Miyakogusa Predicted Gene

Lj0g3v0341639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341639.1 CUFF.23404.1
         (229 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099085.1 | CAAX amino terminal protease family protein | ...   317   4e-87
Medtr1g099420.1 | CAAX amino terminal protease family protein | ...   196   2e-50

>Medtr8g099085.1 | CAAX amino terminal protease family protein | HC
           | chr8:41607888-41603432 | 20130731
          Length = 343

 Score =  317 bits (813), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 163/214 (76%), Positives = 175/214 (81%), Gaps = 2/214 (0%)

Query: 18  PIKGFPGPPTLRPFPTTS-RIFESNLNSPKNKLSILCFRHEH-HSPETPKPEVIDQYLCE 75
           PIK F  PPTLRPFPTTS RI  S  N   NKLSILCFRHE  +S ETPKP+ ID    E
Sbjct: 15  PIKPFSRPPTLRPFPTTSFRIPNSRFNPSNNKLSILCFRHEEDNSSETPKPDFIDHCFHE 74

Query: 76  ESVQSESNDSSVTKRDQNLILQKVASEVFKVFGNRWVVPWTAVTILQVMLLWTSAFWFIG 135
           E VQSES D +V KRD   I+ K A+EVF   G RWVVPW+A TIL+VMLLWTSAFWFIG
Sbjct: 75  ELVQSESRDPNVVKRDWKSIVPKAANEVFNGIGYRWVVPWSATTILKVMLLWTSAFWFIG 134

Query: 136 SWMIPFAAHITGFSKDSLTFRGQALFSLITDVTEGLAGIAILHHCLSRFRPLPPDWFKFS 195
           SWMIPFAAHITGFSKDSLTFRGQALFSL+TDVTEGLAGIAIL  CLSRFRPLPPDWFKFS
Sbjct: 135 SWMIPFAAHITGFSKDSLTFRGQALFSLVTDVTEGLAGIAILVRCLSRFRPLPPDWFKFS 194

Query: 196 LKGTWQPDVIIGCLMFPLVNRLSQFNLDLLPLLP 229
            +G W  DV++GCLMFPLVNRLSQFNLDLLP+LP
Sbjct: 195 PEGKWHFDVVMGCLMFPLVNRLSQFNLDLLPILP 228


>Medtr1g099420.1 | CAAX amino terminal protease family protein | HC
           | chr1:44897057-44901183 | 20130731
          Length = 342

 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 132/206 (64%), Gaps = 9/206 (4%)

Query: 24  GPPTLRPFPTTSRIFESNLNSPKNKLSILCFRHEHHSPETPKPEVIDQYLCEESVQSESN 83
            P    PFP  S    +N      K  +LCF+H ++  E+   E  +  L ++SV+ + +
Sbjct: 29  NPTISSPFPLQSFTLSTN------KWRVLCFKHRNNPSESTDSEFKEDKLSQDSVKFKGD 82

Query: 84  D-SSVTKRDQNLILQKVASEVFKVFGNRWVVPWTAVTILQVMLLWTSAFWFIGSWMIPFA 142
           +   + K+D    L  +   V  V    W VPWTA TI+QVMLLW  +FW +GSW++PF 
Sbjct: 83  EPKDLKKKDWLTALHTIIHTVLSV--EPWKVPWTAKTIVQVMLLWICSFWLVGSWIVPFL 140

Query: 143 AHITGFSKDSLTFRGQALFSLITDVTEGLAGIAILHHCLSRFRPLPPDWFKFSLKGTWQP 202
           A+  G  K++L++RGQAL+SL+TDV EG+ GIAILH CL +F+PL  DWFKF LKG WQ 
Sbjct: 141 AYTAGIRKETLSYRGQALYSLLTDVAEGMVGIAILHRCLEKFKPLSSDWFKFELKGKWQF 200

Query: 203 DVIIGCLMFPLVNRLSQFNLDLLPLL 228
           DV +GCLMFPL+N LSQ NL+L P+L
Sbjct: 201 DVGLGCLMFPLINHLSQMNLNLWPVL 226