Miyakogusa Predicted Gene

Lj0g3v0341389.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341389.3 Non Characterized Hit- tr|I1MLE3|I1MLE3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.12,0,seg,NULL,CUFF.23381.3
         (391 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g026520.1 | transmembrane protein, putative | HC | chr7:88...   513   e-146

>Medtr7g026520.1 | transmembrane protein, putative | HC |
           chr7:8800563-8794554 | 20130731
          Length = 554

 Score =  513 bits (1322), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 242/317 (76%), Positives = 278/317 (87%), Gaps = 2/317 (0%)

Query: 75  PTVKKPCLTVEEMGKDFRRG-VGKESLRVRTIIQKHFVANGASRVRDLPPEQFCSHGFVL 133
           P   + C TVEEMGKDF  G V KE LRVR +I++HFV NGASRVRDLPP++FC HGFVL
Sbjct: 73  PRTSRSCATVEEMGKDFENGFVVKEMLRVRRVIEQHFVLNGASRVRDLPPDKFCRHGFVL 132

Query: 134 GKTSEAGFGNEMYKVLTAAALSVMLNRSLIIGQTRGKYPFGDYISYSNFTFTMKEIKHLW 193
           GKT+EAGFGNEMYK+L+AAALS+MLNRSLIIGQTR KYPF DYISY+NFTFT+KEIKHLW
Sbjct: 133 GKTAEAGFGNEMYKLLSAAALSIMLNRSLIIGQTRSKYPFQDYISYANFTFTLKEIKHLW 192

Query: 194 RSNGCESKYGRKLVIRTDDFEKPVETNVLCSNWIKWKQPIIWFQGTTDSVAAQFFLKNIH 253
           R NGCES YGRKLV+RTDDFEKP ++NVLCSNW +W+QPIIWFQGT D+VA+QFFLKNIH
Sbjct: 193 RLNGCESIYGRKLVMRTDDFEKPAQSNVLCSNWKEWEQPIIWFQGTNDAVASQFFLKNIH 252

Query: 254 SRMRIAALDLFGDPQVLGLRPNVFGELMRVLISPSEDVEAAVNWVIGGGKIPDISLHMRM 313
            +M++AA DLFGDPQVLG +PNVFGELMRVLISPS+DVEAAVNWVIGG K PDISLHMRM
Sbjct: 253 PQMKVAAFDLFGDPQVLGSQPNVFGELMRVLISPSKDVEAAVNWVIGGDKNPDISLHMRM 312

Query: 314 LMNRSVRAVQAALHCIKKAIRSHHLISSRPRVVLVSDTPSLVKSIKSNISEFAEVLHFDY 373
             NRS+RA+QAAL CI+KAI S HL+ SRP+VV+VSDTPSL K+I  NISEFAEV+HFDY
Sbjct: 313 QTNRSIRALQAALRCIRKAIESQHLM-SRPKVVVVSDTPSLAKNISPNISEFAEVVHFDY 371

Query: 374 EKFRGSIFKGLQNSNFR 390
           EKF+G ++ GL   +FR
Sbjct: 372 EKFKGKMYDGLPKFDFR 388