Miyakogusa Predicted Gene

Lj0g3v0341389.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341389.1 Non Characterized Hit- tr|K3ZJM6|K3ZJM6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026779,62.75,0.00000000002,seg,NULL,CUFF.23381.1
         (368 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g026520.1 | transmembrane protein, putative | HC | chr7:88...   552   e-157

>Medtr7g026520.1 | transmembrane protein, putative | HC |
           chr7:8800563-8794554 | 20130731
          Length = 554

 Score =  552 bits (1422), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 265/371 (71%), Positives = 301/371 (81%), Gaps = 4/371 (1%)

Query: 1   MKEIKHLWRSNGCESKYGRKLVIRTDDFEKPVETNVLCSNWIKWKQPIIWFQGTTDSVAA 60
           +KEIKHLWR NGCES YGRKLV+RTDDFEKP ++NVLCSNW +W+QPIIWFQGT D+VA+
Sbjct: 185 LKEIKHLWRLNGCESIYGRKLVMRTDDFEKPAQSNVLCSNWKEWEQPIIWFQGTNDAVAS 244

Query: 61  QFFLKNIHSRMRIAALDLFGDPQVLGLRPNVFGELMRVLISPSEDVEAAVNWVIGGGKIP 120
           QFFLKNIH +M++AA DLFGDPQVLG +PNVFGELMRVLISPS+DVEAAVNWVIGG K P
Sbjct: 245 QFFLKNIHPQMKVAAFDLFGDPQVLGSQPNVFGELMRVLISPSKDVEAAVNWVIGGDKNP 304

Query: 121 DISLHMRMLMNRSVRAVQAALHCIKKAIRSHHLISSRPRVVLVSDTPSLVKSIKSNISEF 180
           DISLHMRM  NRS+RA+QAAL CI+KAI S HL+ SRP+VV+VSDTPSL K+I  NISEF
Sbjct: 305 DISLHMRMQTNRSIRALQAALRCIRKAIESQHLM-SRPKVVVVSDTPSLAKNISPNISEF 363

Query: 181 AEVLHFDYEKFRGSIFKGLQNSNFRRKDWGTAPRWVAFVDFFLASRARYATVSGAHRRVG 240
           AEV+HFDYEKF+G ++ GL   +FR +DWG APRWVAFVDFFLASRARYA VSGAHRRVG
Sbjct: 364 AEVVHFDYEKFKGKMYDGLPKFDFRVRDWGPAPRWVAFVDFFLASRARYAVVSGAHRRVG 423

Query: 241 TTYAQLIAALAATYXX---XXXXXXXXXXXXXXXXXXXXKDGLKNQIGWGHVWNRYGGPL 297
           TTYAQLIAALAA                            DGLKNQIGWGHVWNRY GPL
Sbjct: 424 TTYAQLIAALAAANNLGDDTNTTSGPSFSFLSSFQGNLLSDGLKNQIGWGHVWNRYAGPL 483

Query: 298 SCHNQGNQCAFTPVLPSAWWEGLWQSPIPRDINRLASYGIRLSGLGTVDNNSLQNHCKKR 357
           SC NQ +QCAFTP+LP  WW+GLWQSPIPRDI RL+ YG++LSG G VD +SLQN+C  R
Sbjct: 484 SCRNQNSQCAFTPLLPPGWWDGLWQSPIPRDIKRLSFYGVQLSGFGNVDTDSLQNYCNSR 543

Query: 358 KNVVRTITLKL 368
           K VV+T+T  L
Sbjct: 544 KTVVKTVTYNL 554