Miyakogusa Predicted Gene

Lj0g3v0340909.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0340909.1 Non Characterized Hit- tr|D7T193|D7T193_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.61,2e-16,coiled-coil,NULL; seg,NULL,CUFF.23364.1
         (279 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g018170.1 | zinc finger constans-like protein | HC | chr7:...   245   3e-65
Medtr4g128930.1 | zinc finger constans-like protein | HC | chr4:...    99   5e-21
Medtr1g013450.1 | zinc finger constans-like protein | HC | chr1:...    93   4e-19
Medtr3g105710.1 | zinc finger constans-like protein | HC | chr3:...    77   2e-14

>Medtr7g018170.1 | zinc finger constans-like protein | HC |
           chr7:5837191-5833561 | 20130731
          Length = 396

 Score =  245 bits (626), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 143/221 (64%), Positives = 151/221 (68%), Gaps = 14/221 (6%)

Query: 61  NGFLFSGEVDEYLDLVDCNSCG--ENQFXXXXXXXXXXXXXXXXXXXXXXXXYGVPQKGY 118
           NG+LFSGEVDEYLDLVDCNSCG  EN F                        YGVPQK Y
Sbjct: 188 NGYLFSGEVDEYLDLVDCNSCGGDENTFTTNNTHHHDEYSQQQQQQDH----YGVPQKSY 243

Query: 119 AGDSVVPVXXXXXXXAHHFQLGLEFEPSKAGFSYNGXXXXXXXXXXXMDVGVVPDSTMRD 178
            GDSVV           +FQLGLEFE SKAGFSYNG           MDVGVVP+STM  
Sbjct: 244 VGDSVV---PVQQQQVQNFQLGLEFESSKAGFSYNGGSISQSVSVSSMDVGVVPESTM-- 298

Query: 179 VSVSYSRPSKGTIDLFSGPALQMSSHFSPLDREARVLRYXXXXXXXXXXXXIRYASRKAY 238
              +YSRP KGTIDLFSGP++QMSSHFSP+DREARVLRY            IRYASRKAY
Sbjct: 299 ---TYSRPPKGTIDLFSGPSIQMSSHFSPMDREARVLRYREKKKTRKFEKTIRYASRKAY 355

Query: 239 AETRPRIKGRFAKRTDVEAEVDQMFSTTLITEVGYGIVPSF 279
           AETRPRIKGRFAKRTDVEAEVDQMFST+LITEVGYGIVPSF
Sbjct: 356 AETRPRIKGRFAKRTDVEAEVDQMFSTSLITEVGYGIVPSF 396


>Medtr4g128930.1 | zinc finger constans-like protein | HC |
           chr4:53656301-53658369 | 20130731
          Length = 375

 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 100/177 (56%), Gaps = 18/177 (10%)

Query: 120 GDSVVPVXXXXXXXA--HHFQLG---LEFEPSK-AGFSYNGXXXXXXXXXXXMDVGVVPD 173
            DSVVPV          +H   G   ++F  SK + F+Y             +DVGVVPD
Sbjct: 200 NDSVVPVQTKPTPAPMMNHNSEGCFDIDFCRSKLSSFNYPSHSISHSVSSSSLDVGVVPD 259

Query: 174 -STMRDVSVSYSRPS--KGTIDLFSGPALQMSSHFSPLDREARVLRYXXXXXXXXXXXXI 230
            +T+ ++S ++   S   G ++  S   +Q ++    +DREARV+RY            I
Sbjct: 260 GNTVSEISYNFGSESMVSGGVNS-SNQGVQGATQLCGMDREARVMRYREKRKNRKFEKTI 318

Query: 231 RYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFS--------TTLITEVGYGIVPSF 279
           RYASRKAYAETRPRIKGRFAKRT+++++VD++++        ++++ +  YG+VP+F
Sbjct: 319 RYASRKAYAETRPRIKGRFAKRTEIDSDVDRLYNPADPLSVPSSMLMDCPYGVVPTF 375


>Medtr1g013450.1 | zinc finger constans-like protein | HC |
           chr1:3420903-3419850 | 20130731
          Length = 316

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 84/167 (50%), Gaps = 21/167 (12%)

Query: 117 GYAGDSVVPVXXXXXXXA-----HHFQLGLEFEPSKAGFSYNGXXXXXXXXXXXMDVGVV 171
           G   D VVPV             H+  + ++F  SK  F+YN            MDVGVV
Sbjct: 165 GTTADGVVPVQSHSKTATEHEHEHYSDINIDFSNSKP-FTYN---FNHTVSSPSMDVGVV 220

Query: 172 PDSTMRDVSVSYSRPSKGTIDLFSGPALQMSSHFSPLDREARVLRYXXXXXXXXXXXXIR 231
           PD  +    +SY   S  T    + P + ++   + ++REARV+RY            IR
Sbjct: 221 PDGNVM-TEISYC--SYQTTATETAP-MTVAVPMTAVEREARVMRYREKRKNRRFEKTIR 276

Query: 232 YASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTTLITEVGYGIVPS 278
           YASRKAYAETRPRIKGRFAKR+D+        +  LI E  YG+VPS
Sbjct: 277 YASRKAYAETRPRIKGRFAKRSDL--------NMNLIAEDEYGVVPS 315


>Medtr3g105710.1 | zinc finger constans-like protein | HC |
           chr3:48758302-48759914 | 20130731
          Length = 290

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 59/113 (52%), Gaps = 29/113 (25%)

Query: 166 MDVGVVPDSTMRDVSVSYSRPSKGTIDLFSGPALQMSSHFSPLDREARVLRYXXXXXXXX 225
           MDVGVVPD+   +     S    GT+                +DREARV+RY        
Sbjct: 206 MDVGVVPDA---NTVPEISNCGYGTV---------------AVDREARVMRYREKRKNRR 247

Query: 226 XXXXIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTTLITEVGYGIVPS 278
               IRYASRKAYAETRPRIKGRFAKRTD    VD +         GYG+VP+
Sbjct: 248 FEKTIRYASRKAYAETRPRIKGRFAKRTDA---VDSI--------SGYGVVPT 289