Miyakogusa Predicted Gene

Lj0g3v0340539.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0340539.2 tr|K2T6B4|K2T6B4_PSESY HAD-super family hydrolase
OS=Pseudomonas syringae pv. avellanae str.
ISPaVe0,35.39,5e-19,OS08G0542600 PROTEIN,NULL;
4-NITROPHENYLPHOSPHATASE-RELATED,NULL; seg,NULL; no
description,HAD-like ,CUFF.23308.2
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073140.1 | haloacid dehalogenase-like hydrolase | HC | ch...   373   e-103
Medtr1g073140.2 | haloacid dehalogenase-like hydrolase | HC | ch...   345   2e-95

>Medtr1g073140.1 | haloacid dehalogenase-like hydrolase | HC |
           chr1:32433953-32436892 | 20130731
          Length = 239

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/212 (83%), Positives = 193/212 (91%)

Query: 36  LRGVVFDMDGTLTIPVIDFPAMYRAVLGDDEYRRIKAQSPSGIDILSNIDRWPQHQQQQA 95
           LRGVVFDMDGTLT+PVIDFP+MY+AVLGDDEY R+KA +P GIDIL  ID W   QQ+QA
Sbjct: 27  LRGVVFDMDGTLTVPVIDFPSMYKAVLGDDEYLRVKASNPVGIDILKLIDHWSPLQQRQA 86

Query: 96  YDTIADFERQALLHLQIMPGAADLCRLLDSKQIRRGLITRNVKSAVDIFHERFGITFAPA 155
           YDTIA FE+QAL HLQIMPGAADLC +LDSK+IRRGLITRN+KSAVD+FH+RFGITF+PA
Sbjct: 87  YDTIAHFEKQALDHLQIMPGAADLCNVLDSKKIRRGLITRNMKSAVDLFHQRFGITFSPA 146

Query: 156 LSREFRPYKPDPAPLLHICSLWEVQPNEVIMIGDSLKDDVVCGRQAGAFTCLLDQTGRYD 215
           LSREFRPYKPDPAPLLHICSLWEVQPNEVIM+GDSLKDD+ CG +AGA TCLLDQTGRYD
Sbjct: 147 LSREFRPYKPDPAPLLHICSLWEVQPNEVIMVGDSLKDDIACGGRAGAHTCLLDQTGRYD 206

Query: 216 SFHYANVGFKPDFKVTSLAEVYSILEANFDLS 247
           S  YANV FKPDFKVTSLAEVYSILE NF+LS
Sbjct: 207 SPEYANVDFKPDFKVTSLAEVYSILETNFELS 238


>Medtr1g073140.2 | haloacid dehalogenase-like hydrolase | HC |
           chr1:32434125-32436854 | 20130731
          Length = 238

 Score =  345 bits (886), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 165/209 (78%), Positives = 183/209 (87%), Gaps = 2/209 (0%)

Query: 36  LRGVVFDMDGTLTIPVIDFPAMYRAVLGDDEYRRIKAQSPSGIDILSNIDRWPQHQQQQA 95
           LRGVVFDMDGTLT+PVIDFP+MY+AVLGDDEY R+KA +P GIDIL  ID W   QQ+QA
Sbjct: 27  LRGVVFDMDGTLTVPVIDFPSMYKAVLGDDEYLRVKASNPVGIDILKLIDHWSPLQQRQA 86

Query: 96  YDTIADFERQALLHLQIMPGAADLCRLLDSKQIRRGLITRNVKSAVDIFHERFGITFAPA 155
           YDTIA FE+QAL HLQIMPGAADLC +LDSK+IRRGLITRN+KSAVD+FH+RFGITF+PA
Sbjct: 87  YDTIAHFEKQALDHLQIMPGAADLCNVLDSKKIRRGLITRNMKSAVDLFHQRFGITFSPA 146

Query: 156 LSREFRPYKPDPAPLLHICSLWEVQPNEVIMIGDSLKDDVVCGRQAGAFTCLLDQTGRYD 215
           LSREFRPYKPDPAPLLHICSLWEVQPNEVIM+GDSLKDD+ CG +AGA TCLLDQTGRYD
Sbjct: 147 LSREFRPYKPDPAPLLHICSLWEVQPNEVIMVGDSLKDDIACGGRAGAHTCLLDQTGRYD 206

Query: 216 SFHYANVGFKPDFKVTSLAEVYSILEANF 244
           S  YANV FKPDFK  +L EV S    +F
Sbjct: 207 SPEYANVDFKPDFK--NLEEVTSTFGGSF 233