Miyakogusa Predicted Gene

Lj0g3v0340149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0340149.1 Non Characterized Hit- tr|J3LV29|J3LV29_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G1,39.29,0.0000000005,OS02G0605400 PROTEIN,NULL; EXTENDED
SYNAPTOTAGMIN-RELATED,NULL; C2,C2 membrane targeting protein;
C2,CUFF.23413.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g087320.1 | C2 and GRAM domain plant-like protein | HC | c...   165   2e-41
Medtr4g087320.2 | C2 and GRAM domain plant-like protein | HC | c...   165   2e-41

>Medtr4g087320.1 | C2 and GRAM domain plant-like protein | HC |
           chr4:34264292-34252675 | 20130731
          Length = 590

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/137 (62%), Positives = 95/137 (69%), Gaps = 7/137 (5%)

Query: 4   TMDFALLGFLFPSLWEIQVXXXXXXXXXXXYRFFTFRTADSSADRSLSDHSADD---DKI 60
            MDFA+LGFL PSLWEI+V           Y FFTFR AD  +DRSLS++SA D   DK+
Sbjct: 8   AMDFAVLGFLIPSLWEIEVAFAASLFVILAYWFFTFRIADRHSDRSLSENSAGDSADDKV 67

Query: 61  GL---KGDS-ASSGYLIKLEXXXXXXXXXXXXXGTSDPYVIITCGNEKRFSSMVPGSRNP 116
            +   +GDS A S YLIKLE             GTSDPY IITCGNEKRFSSMVPGSRNP
Sbjct: 68  KIGQSRGDSQAGSAYLIKLELLAAKNLIAANLNGTSDPYTIITCGNEKRFSSMVPGSRNP 127

Query: 117 MWGEEFNFSVDELPVQV 133
           MWGEEFNFSVDELPVQ+
Sbjct: 128 MWGEEFNFSVDELPVQI 144


>Medtr4g087320.2 | C2 and GRAM domain plant-like protein | HC |
           chr4:34264292-34252675 | 20130731
          Length = 519

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/137 (62%), Positives = 95/137 (69%), Gaps = 7/137 (5%)

Query: 4   TMDFALLGFLFPSLWEIQVXXXXXXXXXXXYRFFTFRTADSSADRSLSDHSADD---DKI 60
            MDFA+LGFL PSLWEI+V           Y FFTFR AD  +DRSLS++SA D   DK+
Sbjct: 8   AMDFAVLGFLIPSLWEIEVAFAASLFVILAYWFFTFRIADRHSDRSLSENSAGDSADDKV 67

Query: 61  GL---KGDS-ASSGYLIKLEXXXXXXXXXXXXXGTSDPYVIITCGNEKRFSSMVPGSRNP 116
            +   +GDS A S YLIKLE             GTSDPY IITCGNEKRFSSMVPGSRNP
Sbjct: 68  KIGQSRGDSQAGSAYLIKLELLAAKNLIAANLNGTSDPYTIITCGNEKRFSSMVPGSRNP 127

Query: 117 MWGEEFNFSVDELPVQV 133
           MWGEEFNFSVDELPVQ+
Sbjct: 128 MWGEEFNFSVDELPVQI 144