Miyakogusa Predicted Gene

Lj0g3v0339599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0339599.1 Non Characterized Hit- tr|I1KRM0|I1KRM0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,60,0.00000000000004,seg,NULL,CUFF.23228.1
         (123 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094790.1 | LRR receptor-like kinase family protein | HC |...    69   1e-12
Medtr2g437730.1 | LRR receptor-like kinase family protein | HC |...    48   2e-06

>Medtr4g094790.1 | LRR receptor-like kinase family protein | HC |
           chr4:39003049-39007649 | 20130731
          Length = 1268

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 7/88 (7%)

Query: 23  NLHLCGSPLDRC--DDTPNNENSGRNESSVMXXXXXXXXXXXXXXXXXXRIFCRNKQEFF 80
           NL+LCGSPLDRC  DDT   + S  +ES+V+                  R+FC+NKQEF 
Sbjct: 857 NLNLCGSPLDRCDSDDTSGGKQSRLSESTVVIISVISTSAAIALLILSVRMFCKNKQEFS 916

Query: 81  RKNSEVT-----YVYSSSQRRPLFKLHA 103
           R++S+VT        S +QRRPLF+L A
Sbjct: 917 REDSKVTSYVYSSSSSQAQRRPLFQLRA 944


>Medtr2g437730.1 | LRR receptor-like kinase family protein | HC |
           chr2:14884292-14880150 | 20130731
          Length = 1121

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 6/94 (6%)

Query: 23  NLHLCGSPLDRCDDTPNNENSGRNESSVMXXXXXXXXXXXXXXXXXXRIFCRNKQEFFRK 82
           NLHLCG+ L  C  +  N  S  +E SV+                  +IF RN+QE  +K
Sbjct: 749 NLHLCGASLGSCGAS-RNRLSRLSEKSVIIISALSTLAAIALLVLAVKIFLRNRQELLKK 807

Query: 83  NSEVTYVYSSS----QRRPLFKLHACSWKE-RFQ 111
            SE+  V+SSS    Q+RPLF L     +E R+Q
Sbjct: 808 GSELECVFSSSSSQVQKRPLFPLSTGGRREYRWQ 841