Miyakogusa Predicted Gene

Lj0g3v0339169.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0339169.1 tr|B0BLI6|B0BLI6_LOTJA CM0216.400.nc protein
OS=Lotus japonicus GN=CM0216.400.nc PE=4 SV=1,50.56,3e-17,seg,NULL; no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; Pe,CUFF.23202.1
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g063570.1 | ICE-like protease (caspase) p20 domain protein...    73   5e-13
Medtr8g447080.1 | ICE-like protease (caspase) p20 domain protein...    72   9e-13
Medtr7g088035.1 | ICE-like protease (caspase) p20 domain protein...    69   5e-12
Medtr0340s0030.1 | ICE-like protease (caspase) p20 domain protei...    58   1e-08

>Medtr2g063570.1 | ICE-like protease (caspase) p20 domain protein |
           HC | chr2:26836843-26838886 | 20130731
          Length = 401

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 66/139 (47%), Gaps = 17/139 (12%)

Query: 95  KKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMIQDEQHEDHENQPTE 154
           KKAVLIG  +P  +         + RM   LI+  GFS+ +IT++I D  H     QPT 
Sbjct: 6   KKAVLIGCNYPGTKAELKGCINDVWRMHKCLIHKYGFSDKDITVLI-DTDHS--YTQPTG 62

Query: 155 INIRVKLCRLVDRADPGDILFVHLIAYGCS-------------DGVIITSDQDHIPDSYF 201
            NIR  + RLV  A PGD+ FVH   +G               D  I+ +D + I D  F
Sbjct: 63  KNIRSAMSRLVRSAQPGDVFFVHYSGHGTRLPAETGEDDDTGYDECIVPTDMNLITDEDF 122

Query: 202 RALIWNAGKKGCDLTFVSD 220
           R  +     K C +T VSD
Sbjct: 123 RDFVEKV-PKSCRITIVSD 140


>Medtr8g447080.1 | ICE-like protease (caspase) p20 domain protein |
           HC | chr8:18452465-18454633 | 20130731
          Length = 412

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 17/139 (12%)

Query: 95  KKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMIQDEQHEDHENQPTE 154
           +KAVLIG+ +P  +         + RM   LI   GFSED+IT++I  +       +PT 
Sbjct: 3   RKAVLIGINYPGTKAELRGCVNDVWRMHKCLIERYGFSEDDITILIDTDS---SYTEPTG 59

Query: 155 INIRVKLCRLVDRADPGDILFVHLIAYGCS-------------DGVIITSDQDHIPDSYF 201
            NIR  L  LV  ++ GD+LFVH   +G               D  I+ SD + I D  F
Sbjct: 60  KNIRRVLSELVRSSEDGDVLFVHYSGHGTRLPAETGEDDDTGFDECIVPSDMNLITDDDF 119

Query: 202 RALIWNAGKKGCDLTFVSD 220
           +  + +   +GC LT VSD
Sbjct: 120 KEFV-DGVPRGCRLTIVSD 137


>Medtr7g088035.1 | ICE-like protease (caspase) p20 domain protein |
           HC | chr7:34248766-34247292 | 20130731
          Length = 319

 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 13/143 (9%)

Query: 90  EKKKEKKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMIQDEQHEDHE 149
           E+K ++ AVL+G  +P+           +L MKD L+   GF   NI L+  D+      
Sbjct: 2   ERKNKRLAVLVGCNYPNTPNELRGCINDVLAMKDTLVKRFGFDHANIQLLTDDDPKNSSS 61

Query: 150 NQPTEINIRVKLCRLVDRADPGDILFVHLIAYGCS------------DGVIITSDQDHIP 197
             PT  NI+  L  +VD+A+ GD+L+ H   +G              +  I+  D + I 
Sbjct: 62  TMPTGANIKQALSSMVDKAEAGDVLYFHYSGHGTRIPSKIHGHPFRHEEAIVPCDFNLIT 121

Query: 198 DSYFRALIWNAGKKGCDLTFVSD 220
           D  FR L+ N   KG  LT +SD
Sbjct: 122 DLDFRQLV-NRIPKGASLTILSD 143


>Medtr0340s0030.1 | ICE-like protease (caspase) p20 domain protein |
           HC | scaffold0340:7919-6288 | 20130731
          Length = 278

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 23/150 (15%)

Query: 94  EKKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMI-----------QD 142
           +K+A+++GL +P+      D     +R+KD+LI + GF+ + + L++            D
Sbjct: 3   KKRALIVGLNYPNQSNFLRDSVNDSIRVKDMLITYYGFAPNAVKLVVDAKGTMNTPPLND 62

Query: 143 EQHEDHENQPTEINIRVKLCRLVDRADPGDILFVHLIAYGCSDGVIITSDQDH------- 195
            + +    Q  +  I  KL +++ ++  GD +F +   +G S      +D          
Sbjct: 63  FRIKKTTKQINDEYICKKLTKMIKKSSAGDTIFFYFAGHGGSTTTAFDNDTGQEEYMRCH 122

Query: 196 ----IPDSYFRALIWNAGKKGCDLTFVSDC 221
               I DS  R L W    +GC  TFV+DC
Sbjct: 123 GGTMIEDSAIRHL-WQTVPEGCSFTFVADC 151