Miyakogusa Predicted Gene

Lj0g3v0337709.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0337709.1 tr|G7JBM8|G7JBM8_MEDTR EG45-like domain
containing protein OS=Medicago truncatula GN=MTR_3g107770
PE,41.88,4e-19,DPBB_1,Barwin-related endoglucanase; no
description,Barwin-like endoglucanase; Barwin-like
endogluca,CUFF.23090.1
         (133 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g107500.1 | rare lipoprotein A-like double-psi beta-barrel...   202   8e-53
Medtr6g068780.1 | rare lipoprotein A-like double-psi beta-barrel...   199   5e-52
Medtr3g107770.1 | rare lipoprotein A-like double-psi beta-barrel...   102   7e-23
Medtr3g107770.2 | rare lipoprotein A-like double-psi beta-barrel...   102   7e-23

>Medtr3g107500.1 | rare lipoprotein A-like double-psi beta-barrel
           protein | HC | chr3:49581905-49581018 | 20130731
          Length = 151

 Score =  202 bits (514), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 99/135 (73%), Positives = 112/135 (82%), Gaps = 3/135 (2%)

Query: 1   MIRLFTFAIIFSLLLKQMSLQVHGEVGTAAAYGPPYIPTACDGNRREQFPPGNIFAAVNE 60
           ++R F   II SLL KQMS+ +  +VGTA++YGPPYIPTACDGNRR+QFPPGNIF AVNE
Sbjct: 18  IMRSFMLVIISSLLFKQMSI-ILADVGTASSYGPPYIPTACDGNRRQQFPPGNIFVAVNE 76

Query: 61  GLWDNGAACGRRYRVRCVSGHNKPCKGG-SVDVKVVDSCA-AGSSCSNTLLLSNDAFAAI 118
           GLWDNGAACGRRYRVRCVSG NKPCKGG S+DVKVVDS     SSC +T  +S +AFAAI
Sbjct: 77  GLWDNGAACGRRYRVRCVSGINKPCKGGSSIDVKVVDSITCTKSSCPHTFHMSTEAFAAI 136

Query: 119 SRFPNAKINIEYTQI 133
           SRFPNA IN+EY QI
Sbjct: 137 SRFPNANINVEYIQI 151


>Medtr6g068780.1 | rare lipoprotein A-like double-psi beta-barrel
           protein | HC | chr6:24725013-24724435 | 20130731
          Length = 133

 Score =  199 bits (507), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 97/134 (72%), Positives = 110/134 (82%), Gaps = 3/134 (2%)

Query: 2   IRLFTFAIIFSLLLKQMSLQVHGEVGTAAAYGPPYIPTACDGNRREQFPPGNIFAAVNEG 61
           +R FT  II SLLLKQMS+ +  +VGTA++YGPPYIPTACDGNRR+QFPPGNIF AVNEG
Sbjct: 1   MRSFTLVIISSLLLKQMSI-ILADVGTASSYGPPYIPTACDGNRRQQFPPGNIFVAVNEG 59

Query: 62  LWDNGAACGRRYRVRCVSGHNKPCK-GGSVDVKVVDSCA-AGSSCSNTLLLSNDAFAAIS 119
           LWDNGAACGRRYR+RC+SG NKPCK G S+DVKVVD      SSC  T  +S +AFAAIS
Sbjct: 60  LWDNGAACGRRYRIRCISGINKPCKVGSSIDVKVVDKITCTRSSCHQTFHMSTEAFAAIS 119

Query: 120 RFPNAKINIEYTQI 133
           RFPNA IN+EY QI
Sbjct: 120 RFPNANINVEYIQI 133


>Medtr3g107770.1 | rare lipoprotein A-like double-psi beta-barrel
           protein | HC | chr3:49724058-49730669 | 20130731
          Length = 143

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 73/117 (62%), Gaps = 6/117 (5%)

Query: 23  HGEVGTAAAYGPPYIPTACDGNRREQFPPGNIFAAVNEGLWDNGAACGRRYRVRCVSGH- 81
             +VGTA+ Y PP++PTAC G    QFP  N+F +  EG+WDNGAACGR Y VRC+S   
Sbjct: 27  QADVGTASHYSPPFLPTACFGGDASQFPSSNMFGSAGEGIWDNGAACGRLYEVRCISAAV 86

Query: 82  NKPC-KGGSVDVKVVD----SCAAGSSCSNTLLLSNDAFAAISRFPNAKINIEYTQI 133
            + C  G ++ +K+VD    S +  SS   +++LS  AF  I+   ++ INIE+ Q+
Sbjct: 87  PRTCIPGQTIQIKIVDRAQSSVSRPSSDDTSMVLSTTAFQIIANVSSSLINIEFQQV 143


>Medtr3g107770.2 | rare lipoprotein A-like double-psi beta-barrel
           protein | HC | chr3:49729090-49730789 | 20130731
          Length = 143

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 73/117 (62%), Gaps = 6/117 (5%)

Query: 23  HGEVGTAAAYGPPYIPTACDGNRREQFPPGNIFAAVNEGLWDNGAACGRRYRVRCVSGH- 81
             +VGTA+ Y PP++PTAC G    QFP  N+F +  EG+WDNGAACGR Y VRC+S   
Sbjct: 27  QADVGTASHYSPPFLPTACFGGDASQFPSSNMFGSAGEGIWDNGAACGRLYEVRCISAAV 86

Query: 82  NKPC-KGGSVDVKVVD----SCAAGSSCSNTLLLSNDAFAAISRFPNAKINIEYTQI 133
            + C  G ++ +K+VD    S +  SS   +++LS  AF  I+   ++ INIE+ Q+
Sbjct: 87  PRTCIPGQTIQIKIVDRAQSSVSRPSSDDTSMVLSTTAFQIIANVSSSLINIEFQQV 143