Miyakogusa Predicted Gene

Lj0g3v0336789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0336789.1 tr|D8QTN2|D8QTN2_SELML Site-determining protein
OS=Selaginella moellendorffii GN=SELMODRAFT_131305 P,80.7,3e-19,no
description,NULL; SUBFAMILY NOT NAMED,ATP binding protein MinD; FAMILY
NOT NAMED,NULL; seg,NULL; ,CUFF.23021.1
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g048300.1 | septum site determining protein MinD, putative...    82   1e-16

>Medtr6g048300.1 | septum site determining protein MinD, putative |
           HC | chr6:17428695-17430079 | 20130731
          Length = 349

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/89 (53%), Positives = 54/89 (60%), Gaps = 12/89 (13%)

Query: 14  SFSHSTLLHHPSFPFTPSKSLIPTPKSKPYPTKALLQWNRKPQLAGETPRXXXXXXXXXX 73
           S +H  L H P+FP        P PK+    TK+LLQWNRKPQL+GETPR          
Sbjct: 25  SITH--LRHSPTFPK-------PKPKTL---TKSLLQWNRKPQLSGETPRVVVVTSGKGG 72

Query: 74  XXXXXXXANMGLSLARLGFSVVAIDADVG 102
                  AN+GLSLARLGFSVVAIDADVG
Sbjct: 73  VGKTTTTANIGLSLARLGFSVVAIDADVG 101