Miyakogusa Predicted Gene

Lj0g3v0335449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0335449.1 Non Characterized Hit- tr|I3SB82|I3SB82_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,76.47,0.00000000001,no description,NAD(P)-binding
domain,CUFF.22912.1
         (59 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g087850.1 | NAD(P)-binding rossmann-fold protein | HC | ch...    70   4e-13
Medtr3g087860.1 | NAD(P)-binding rossmann-fold protein | HC | ch...    68   2e-12

>Medtr3g087850.1 | NAD(P)-binding rossmann-fold protein | HC |
           chr3:39815002-39813467 | 20130731
          Length = 298

 Score = 70.1 bits (170), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/52 (69%), Positives = 39/52 (75%), Gaps = 2/52 (3%)

Query: 1   MVVAVVPHMATRKQGKIVNIGSNSALASGPRSSAY--SNDALHAMTDTSRFS 50
           MV AVVPHMATRKQGKIVN+GS +ALASGP    Y  S  ALHA+TDT R  
Sbjct: 139 MVQAVVPHMATRKQGKIVNVGSVTALASGPWGGTYSASKAALHALTDTLRLE 190


>Medtr3g087860.1 | NAD(P)-binding rossmann-fold protein | HC |
           chr3:39818622-39816110 | 20130731
          Length = 284

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/52 (67%), Positives = 39/52 (75%), Gaps = 2/52 (3%)

Query: 1   MVVAVVPHMATRKQGKIVNIGSNSALASGPRSSAY--SNDALHAMTDTSRFS 50
           MV AVVPHMATRK+GKIVNIGS + L SGP + AY  S  ALHA+TDT R  
Sbjct: 124 MVQAVVPHMATRKRGKIVNIGSVTGLVSGPWNGAYCASKAALHALTDTLRLE 175