Miyakogusa Predicted Gene

Lj0g3v0335329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0335329.1 Non Characterized Hit- tr|I1KNL5|I1KNL5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51169
PE,74.29,0.00000008, ,CUFF.22905.1
         (85 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g134080.3 | sister chromatid cohesion PDS5-like protein | ...    61   2e-10
Medtr4g134080.1 | sister chromatid cohesion PDS5-like protein | ...    61   2e-10
Medtr4g134080.2 | sister chromatid cohesion PDS5-like protein | ...    61   2e-10
Medtr2g027090.1 | sister chromatid cohesion PDS5-like protein | ...    52   9e-08

>Medtr4g134080.3 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:56119254-56132113 | 20130731
          Length = 1667

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 30/35 (85%)

Query: 22  LSKVHQYIKNRLLDTKYAFAFFFNMFGSKQEEFAE 56
           LSKVHQYIK+R+LD KYA AF FN+FGSK  EFAE
Sbjct: 903 LSKVHQYIKDRVLDAKYACAFLFNIFGSKPHEFAE 937


>Medtr4g134080.1 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:56119240-56132121 | 20130731
          Length = 1660

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 30/35 (85%)

Query: 22  LSKVHQYIKNRLLDTKYAFAFFFNMFGSKQEEFAE 56
           LSKVHQYIK+R+LD KYA AF FN+FGSK  EFAE
Sbjct: 903 LSKVHQYIKDRVLDAKYACAFLFNIFGSKPHEFAE 937


>Medtr4g134080.2 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:56119398-56132067 | 20130731
          Length = 1657

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 30/35 (85%)

Query: 22  LSKVHQYIKNRLLDTKYAFAFFFNMFGSKQEEFAE 56
           LSKVHQYIK+R+LD KYA AF FN+FGSK  EFAE
Sbjct: 903 LSKVHQYIKDRVLDAKYACAFLFNIFGSKPHEFAE 937


>Medtr2g027090.1 | sister chromatid cohesion PDS5-like protein | HC
           | chr2:9853017-9871224 | 20130731
          Length = 1683

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 22  LSKVHQYIKNRLLDTKYAFAFFFNMFGSKQEEFAE 56
           LSKVHQYIK+  L+ KYA AF  N+FG+  EEFAE
Sbjct: 895 LSKVHQYIKDHNLEAKYACAFILNIFGTNSEEFAE 929