Miyakogusa Predicted Gene

Lj0g3v0334939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0334939.1 tr|I1JED0|I1JED0_SOYBN UDP-glucose
6-dehydrogenase OS=Glycine max PE=3 SV=1,77.14,0.0000005,no
description,NAD(P)-binding domain,CUFF.22875.1
         (38 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g082990.1 | UDP-glucose 6-dehydrogenase family protein | H...    58   2e-09
Medtr5g043970.1 | UDP-glucose 6-dehydrogenase family protein | H...    58   2e-09
Medtr7g012950.1 | UDP-glucose 6-dehydrogenase family protein | H...    57   3e-09
Medtr4g109360.1 | UDP-glucose 6-dehydrogenase family protein | H...    49   1e-06
Medtr4g109360.2 | UDP-glucose 6-dehydrogenase family protein | H...    49   1e-06

>Medtr4g082990.1 | UDP-glucose 6-dehydrogenase family protein | HC |
           chr4:32272250-32270714 | 20130731
          Length = 480

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/36 (69%), Positives = 32/36 (88%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFKKLDYQK+Y+N+Q  P F+FDG+NV+DV KLR+
Sbjct: 423 DEFKKLDYQKIYDNMQK-PAFLFDGRNVMDVGKLRK 457


>Medtr5g043970.1 | UDP-glucose 6-dehydrogenase family protein | HC |
           chr5:19328260-19325637 | 20130731
          Length = 481

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/36 (72%), Positives = 31/36 (86%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFK LDYQKV++N+Q  P FIFDG+NVVDV KLR+
Sbjct: 424 DEFKNLDYQKVFDNMQK-PAFIFDGRNVVDVKKLRD 458


>Medtr7g012950.1 | UDP-glucose 6-dehydrogenase family protein | HC |
           chr7:3666623-3663464 | 20130731
          Length = 480

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/36 (69%), Positives = 30/36 (83%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFK LDYQ++YEN+Q  P F+FDG+NVVD  KLRE
Sbjct: 423 DEFKTLDYQRIYENMQK-PAFVFDGRNVVDAEKLRE 457


>Medtr4g109360.1 | UDP-glucose 6-dehydrogenase family protein | HC |
           chr4:45417870-45414761 | 20130731
          Length = 478

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 32/36 (88%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFK +DYQK++++++ P  F+FDG+NV+DV+KL++
Sbjct: 426 DEFKTIDYQKIFDSMEKP-AFVFDGRNVLDVDKLKK 460


>Medtr4g109360.2 | UDP-glucose 6-dehydrogenase family protein | HC |
           chr4:45417534-45414761 | 20130731
          Length = 478

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 32/36 (88%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFK +DYQK++++++ P  F+FDG+NV+DV+KL++
Sbjct: 426 DEFKTIDYQKIFDSMEKP-AFVFDGRNVLDVDKLKK 460