Miyakogusa Predicted Gene
- Lj0g3v0334929.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0334929.1 Non Characterized Hit- tr|I1MF12|I1MF12_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13812
PE,71.43,2e-19,N7-RELATED PROTEIN,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL; no description,NULL,CUFF.22866.1
(65 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g019060.1 | F-box/LRR protein, putative | LC | chr2:613387... 93 7e-20
Medtr3g065610.1 | F-box/LRR protein | HC | chr3:29646510-2964808... 91 2e-19
Medtr2g018940.1 | F-box/LRR protein | HC | chr2:6045280-6047439 ... 87 3e-18
Medtr3g065590.1 | F-box/LRR protein | LC | chr3:29638565-2964017... 87 4e-18
Medtr2g018910.1 | F-box/LRR protein | HC | chr2:6040628-6044118 ... 85 2e-17
Medtr3g067625.1 | F-box/LRR protein | LC | chr3:30222987-3022757... 84 3e-17
Medtr3g067990.1 | F-box/LRR protein, putative | LC | chr3:306242... 82 9e-17
Medtr3g067630.1 | F-box/LRR protein | LC | chr3:30230228-3023133... 80 6e-16
Medtr2g018950.1 | F-box/LRR protein | HC | chr2:6051919-6054233 ... 79 7e-16
Medtr3g067615.1 | F-box/LRR protein | LC | chr3:30201111-3020339... 77 5e-15
Medtr8g091730.1 | F-box/LRR protein | LC | chr8:38284347-3828622... 73 6e-14
Medtr2g018900.1 | F-box/LRR protein | LC | chr2:6037033-6038152 ... 67 4e-12
Medtr2g095850.1 | F-box/LRR protein | LC | chr2:40892691-4089095... 67 5e-12
Medtr3g065620.1 | F-box/LRR protein, putative | LC | chr3:296488... 66 6e-12
Medtr7g047530.1 | F-box/LRR protein | LC | chr7:16644937-1664384... 66 6e-12
Medtr7g451730.1 | F-box/LRR protein | LC | chr7:17619325-1761820... 66 7e-12
Medtr3g067645.1 | F-box/LRR protein | HC | chr3:30238909-3024079... 66 8e-12
Medtr3g065730.1 | F-box/LRR protein, putative | LC | chr3:296987... 66 8e-12
Medtr1g045100.1 | F-box/LRR protein | LC | chr1:16955861-1695474... 66 8e-12
Medtr1g044795.1 | F-box/LRR protein | LC | chr1:16966376-1696531... 65 2e-11
Medtr8g040130.1 | F-box/LRR protein | LC | chr8:14934659-1493384... 64 3e-11
Medtr3g065890.1 | F-box/LRR protein | HC | chr3:29751756-2975295... 64 4e-11
Medtr3g080330.1 | F-box/LRR protein, putative | LC | chr3:363282... 63 5e-11
Medtr3g080280.1 | F-box/LRR protein | LC | chr3:36314064-3631307... 62 1e-10
Medtr3g065850.1 | F-box/LRR protein | LC | chr3:29747139-2972992... 60 5e-10
Medtr3g080320.1 | F-box/LRR protein, putative | LC | chr3:363261... 59 1e-09
Medtr8g006980.1 | F-box/LRR protein | LC | chr8:1153108-1152198 ... 59 1e-09
Medtr5g027890.1 | F-box/LRR protein | LC | chr5:11634854-1163576... 58 2e-09
Medtr3g080360.1 | F-box/LRR protein | HC | chr3:36336952-3633584... 58 2e-09
Medtr5g036740.1 | F-box/LRR protein | LC | chr5:16053749-1605281... 57 5e-09
Medtr5g098180.1 | ubiquitin-protein ligase | LC | chr5:43004019-... 57 5e-09
Medtr5g064480.1 | ubiquitin-protein ligase | HC | chr5:27070427-... 56 9e-09
Medtr5g064480.2 | ubiquitin-protein ligase | HC | chr5:27070606-... 56 9e-09
Medtr6g015890.1 | F-box/LRR protein | LC | chr6:5570201-5568006 ... 55 1e-08
Medtr6g015900.1 | F-box/LRR protein | LC | chr6:5574580-5573648 ... 55 2e-08
Medtr3g065790.1 | F-box/LRR protein | LC | chr3:29712876-2971353... 54 4e-08
Medtr3g074900.1 | ubiquitin-protein ligase | HC | chr3:33833221-... 54 4e-08
Medtr3g080310.1 | F-box/LRR protein | LC | chr3:36321437-3632055... 52 1e-07
Medtr3g065840.1 | F-box/LRR protein, putative | LC | chr3:297266... 52 1e-07
Medtr5g062080.1 | F-box/LRR protein | LC | chr5:25784472-2578371... 50 6e-07
>Medtr2g019060.1 | F-box/LRR protein, putative | LC |
chr2:6133876-6132345 | 20130731
Length = 282
Score = 92.8 bits (229), Expect = 7e-20, Method: Composition-based stats.
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 1 MGKCCPHLQVLKFNMQETK--GYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDG 58
+G+ CP L+ KFN+Q K E DD+AFAIA+TMP LRH+QL GN +TN+GLLAILDG
Sbjct: 144 IGRSCPRLKTFKFNIQAYKYPRVEDDDDAFAIAQTMPGLRHLQLFGNKMTNDGLLAILDG 203
Query: 59 CPHLESL 65
C HLESL
Sbjct: 204 CLHLESL 210
>Medtr3g065610.1 | F-box/LRR protein | HC | chr3:29646510-29648087 |
20130731
Length = 307
Score = 90.9 bits (224), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Query: 1 MGKCCPHLQVLKFNMQ-------ETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLL 53
+GK CP L+ LKFN KGY+C+ EA AIAKTMP LRH++L GN LTN+GL+
Sbjct: 162 IGKNCPLLKTLKFNQPFKGINCGSYKGYKCNKEALAIAKTMPELRHLELWGNKLTNDGLI 221
Query: 54 AILDGCPHLESL 65
AILDGCP+LESL
Sbjct: 222 AILDGCPYLESL 233
>Medtr2g018940.1 | F-box/LRR protein | HC | chr2:6045280-6047439 |
20130731
Length = 332
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 1 MGKCCPHLQVLKFNMQETKG--YECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDG 58
+G+CCP L+ KFN++ + E DDEAF+IAKTMP LRH+ L+GN ++ +GL AILDG
Sbjct: 167 IGRCCPQLKTFKFNIEGFRRPRMEFDDEAFSIAKTMPGLRHLMLVGNKMSKDGLRAILDG 226
Query: 59 CPHLESL 65
CPHLESL
Sbjct: 227 CPHLESL 233
>Medtr3g065590.1 | F-box/LRR protein | LC | chr3:29638565-29640179 |
20130731
Length = 315
Score = 86.7 bits (213), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 7/72 (9%)
Query: 1 MGKCCPHLQVLKFNMQ-------ETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLL 53
+GK CP L+ LKFN KGY+C+ EA AIAKTMP LR ++L GN LTN+GL+
Sbjct: 162 IGKNCPLLKTLKFNQPFKGILCGSYKGYKCNKEALAIAKTMPELRDLELWGNKLTNDGLI 221
Query: 54 AILDGCPHLESL 65
AI DGCP+LESL
Sbjct: 222 AIFDGCPYLESL 233
>Medtr2g018910.1 | F-box/LRR protein | HC | chr2:6040628-6044118 |
20130731
Length = 329
Score = 84.7 bits (208), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 1 MGKCCPHLQVLKFNMQETK--GYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDG 58
+G+ CP L+ KFN++ + + CDD AF+IA+TMP LRH+QL GN ++N+GL AILDG
Sbjct: 170 IGRGCPQLKTFKFNIEGYRRPHFVCDDVAFSIAETMPGLRHLQLFGNKMSNDGLRAILDG 229
Query: 59 CPHLESL 65
CP LESL
Sbjct: 230 CPLLESL 236
>Medtr3g067625.1 | F-box/LRR protein | LC | chr3:30222987-30227573 |
20130731
Length = 474
Score = 84.0 bits (206), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 50/65 (76%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ LKF+ +K E +D+AFAIAKTMP+LRH+ + GN LTN GL AILDGCP
Sbjct: 161 IGRSCPLLKSLKFSRMFSKDIELNDDAFAIAKTMPKLRHLSMFGNLLTNVGLHAILDGCP 220
Query: 61 HLESL 65
LESL
Sbjct: 221 LLESL 225
>Medtr3g067990.1 | F-box/LRR protein, putative | LC |
chr3:30624253-30621366 | 20130731
Length = 258
Score = 82.4 bits (202), Expect = 9e-17, Method: Composition-based stats.
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 1 MGKCCPHLQVLKFNMQETKG-YECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGC 59
+G+ CP L+ L FN +G ++CDDEAF IAKTMP LRH+ + GN L+ GLLAILDGC
Sbjct: 150 IGQSCPLLRSLTFNGASYRGRFKCDDEAFIIAKTMPGLRHLDIHGNPLSEVGLLAILDGC 209
Query: 60 PHLESL 65
P LESL
Sbjct: 210 PLLESL 215
>Medtr3g067630.1 | F-box/LRR protein | LC | chr3:30230228-30231330 |
20130731
Length = 328
Score = 79.7 bits (195), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ +KF+ +K E +D+AFAIAKTM +LRH+ + GN LTN GL AILDGCP
Sbjct: 161 IGRSCPLLKSIKFSRMFSKDIELNDDAFAIAKTMTKLRHLSMFGNLLTNVGLHAILDGCP 220
Query: 61 HLESL 65
LES+
Sbjct: 221 LLESI 225
>Medtr2g018950.1 | F-box/LRR protein | HC | chr2:6051919-6054233 |
20130731
Length = 325
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 17/79 (21%)
Query: 1 MGKCCPHLQVLKFNMQETKGYE--------------CDDEAFAIAKTMPRLRHIQLLGNS 46
+G+ CP L+ LKFN Q GY D+EAFAIAK MP LRH+QL+GN
Sbjct: 165 IGRRCPRLKTLKFNSQ---GYRHPHIQYDDDDEDAYDDNEAFAIAKYMPGLRHLQLIGNE 221
Query: 47 LTNEGLLAILDGCPHLESL 65
+TN+GL+A+LDGCPHLESL
Sbjct: 222 MTNDGLVALLDGCPHLESL 240
>Medtr3g067615.1 | F-box/LRR protein | LC | chr3:30201111-30203392 |
20130731
Length = 284
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L LKF+ K E +D+A AIAKTMP+LRH+ + GN LTN GL AILDGCP
Sbjct: 147 IGRSCPLLISLKFSRMFCKDIELNDDAIAIAKTMPKLRHLSMFGNLLTNVGLHAILDGCP 206
Query: 61 HLESL 65
LES+
Sbjct: 207 LLESV 211
>Medtr8g091730.1 | F-box/LRR protein | LC | chr8:38284347-38286223 |
20130731
Length = 308
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ L +N G DEAF IAKTMP LRH+ + N LT++GLLAILDGCP
Sbjct: 172 IGQNCPLLKSLVYNGMSYGGRSKCDEAFIIAKTMPGLRHLDIHKNPLTDDGLLAILDGCP 231
Query: 61 HLESL 65
LESL
Sbjct: 232 LLESL 236
>Medtr2g018900.1 | F-box/LRR protein | LC | chr2:6037033-6038152 |
20130731
Length = 202
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDD--EAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDG 58
+G+CCP L+ L+F + E +G DD EAF I M R +QL + +TN+GLLAILDG
Sbjct: 130 IGRCCPRLKTLEFRIIE-RGNPSDDDEEAFDIELNMHGFRRLQLFRDEITNKGLLAILDG 188
Query: 59 CPHLESL 65
CPHLE L
Sbjct: 189 CPHLEYL 195
>Medtr2g095850.1 | F-box/LRR protein | LC | chr2:40892691-40890950 |
20130731
Length = 197
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MGKCCPHLQVLKFN-MQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGC 59
+G+ CP L+ L F M + + + CDD+AF IAK M L H+ L G+ L++ GLLAILDGC
Sbjct: 106 IGQSCPALKSLTFYAMSDGEHFTCDDKAFIIAKKMHGLLHLVLHGDPLSDVGLLAILDGC 165
Query: 60 PHLESL 65
P LESL
Sbjct: 166 PRLESL 171
>Medtr3g065620.1 | F-box/LRR protein, putative | LC |
chr3:29648851-29649911 | 20130731
Length = 273
Score = 66.2 bits (160), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ L ++ CDDEA A+ KTM +LRHI++ N LTN+GLLAILDG P
Sbjct: 157 IGRSCPVLKSLTYS--RCFYSICDDEAIAVGKTMTKLRHIKIYENLLTNDGLLAILDGSP 214
Query: 61 HLESL 65
LESL
Sbjct: 215 LLESL 219
>Medtr7g047530.1 | F-box/LRR protein | LC | chr7:16644937-16643844 |
20130731
Length = 220
Score = 66.2 bits (160), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ LKF+ + + +D A AIAKTMP+LR++ ++GN+LTN+ LL ILD CP
Sbjct: 111 IGRFCPLLKSLKFSRSFFRSIKWND-ALAIAKTMPKLRYLSMIGNTLTNDELLVILDRCP 169
Query: 61 HLESL 65
LE L
Sbjct: 170 LLEYL 174
>Medtr7g451730.1 | F-box/LRR protein | LC | chr7:17619325-17618205 |
20130731
Length = 229
Score = 65.9 bits (159), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ LKF+ + + +D A AIAKTMP+LR++ ++GN+LTN+ LL ILD CP
Sbjct: 120 IGRFCPLLKSLKFSRSFFRSIKWND-ALAIAKTMPKLRYLSMIGNTLTNDELLVILDRCP 178
Query: 61 HLESL 65
LE L
Sbjct: 179 LLEYL 183
>Medtr3g067645.1 | F-box/LRR protein | HC | chr3:30238909-30240791 |
20130731
Length = 341
Score = 65.9 bits (159), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L++LKF + + +CD++AFAIA TMP+LR + + GNSLTN GLL+ILD CP
Sbjct: 160 IGRGCPLLKLLKFKKKCCEDIKCDEDAFAIANTMPKLRLLMIFGNSLTNVGLLSILDACP 219
Query: 61 HLESL 65
LE L
Sbjct: 220 LLEDL 224
>Medtr3g065730.1 | F-box/LRR protein, putative | LC |
chr3:29698778-29699862 | 20130731
Length = 247
Score = 65.9 bits (159), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLG-NSLTNEGLLAILDGC 59
+G+CCP L+ L F GY D AF++ KTMP LRH+ G + L + GLLAIL+GC
Sbjct: 142 IGRCCPLLKSLHFERVSYSGY---DAAFSVGKTMPGLRHLSFSGIHFLDDNGLLAILNGC 198
Query: 60 PHLESL 65
P LESL
Sbjct: 199 PLLESL 204
>Medtr1g045100.1 | F-box/LRR protein | LC | chr1:16955861-16954746 |
20130731
Length = 285
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEG-LLAILDGC 59
+G CCP L+ L+ ++ K DDE A+AKTMPRLRH+++ N L+++G L+AIL+GC
Sbjct: 172 VGGCCPLLKSLECHLTFDKEEISDDEFLAVAKTMPRLRHLKISRNKLSSDGILIAILNGC 231
Query: 60 PHLESL 65
P LESL
Sbjct: 232 PLLESL 237
>Medtr1g044795.1 | F-box/LRR protein | LC | chr1:16966376-16965316 |
20130731
Length = 287
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 1 MGKCCPHLQVLKFNM-QETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGC 59
+G CP L+ L + + K + DDE FAIAK+MPRLRH+++ GN+L+++G+LAIL+ C
Sbjct: 171 VGGSCPLLKSLTCMLTSDMKTGKSDDELFAIAKSMPRLRHLKIAGNNLSSDGVLAILNEC 230
Query: 60 PHLESL 65
LESL
Sbjct: 231 SLLESL 236
>Medtr8g040130.1 | F-box/LRR protein | LC | chr8:14934659-14933846 |
20130731
Length = 223
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+CCP L+ LK+ E +D AF IAK MP L ++++ + LTN+ +LAILDGCP
Sbjct: 144 VGQCCPLLKSLKYCRHPLDNIEMNDAAFGIAKIMPGLHYLKMSLDELTNDDVLAILDGCP 203
Query: 61 HLESL 65
LE+L
Sbjct: 204 LLETL 208
>Medtr3g065890.1 | F-box/LRR protein | HC | chr3:29751756-29752959 |
20130731
Length = 238
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 1 MGKCCPHLQVLKFN------MQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLA 54
+G+CCP L+ L M Y DEAF IAKTM LRH++LLG L + LLA
Sbjct: 127 IGQCCPLLKSLNLERLSVDGMPTVYSYCKGDEAFCIAKTMSGLRHLKLLGLWLNYDELLA 186
Query: 55 ILDGCPHLESL 65
ILDGCP LESL
Sbjct: 187 ILDGCPLLESL 197
>Medtr3g080330.1 | F-box/LRR protein, putative | LC |
chr3:36328269-36327390 | 20130731
Length = 261
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ LK+ + + D AF IA+TMP LRH+ L G+ LT G+LAI+D CP
Sbjct: 155 LGRYCPLLKSLKYCSWSHESCDSDKMAFVIAETMPGLRHLDLKGHELTELGVLAIIDSCP 214
Query: 61 HLESL 65
LESL
Sbjct: 215 LLESL 219
>Medtr3g080280.1 | F-box/LRR protein | LC | chr3:36314064-36313079 |
20130731
Length = 293
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ LKF + D A IA+TMP LRH+ + G+ LT G+LAI+D CP
Sbjct: 164 LGRSCPLLKSLKFVNSRFTSCDSDKTALVIAETMPGLRHLDMKGHKLTELGVLAIIDKCP 223
Query: 61 HLESL 65
LESL
Sbjct: 224 LLESL 228
>Medtr3g065850.1 | F-box/LRR protein | LC | chr3:29747139-29729925 |
20130731
Length = 263
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 MGKCCPHLQVLKF-NMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGC 59
+G+CCP L+ L + + Y DEA A AKTM LRH++L G + G LAILDGC
Sbjct: 162 IGRCCPLLKSLNLERLSSLRFYGKRDEALAFAKTMTGLRHLKLNGIYVNYVGFLAILDGC 221
Query: 60 PHLESL 65
HLES
Sbjct: 222 HHLESF 227
>Medtr3g080320.1 | F-box/LRR protein, putative | LC |
chr3:36326160-36325532 | 20130731
Length = 188
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ LKF++ E D AF IA+TMP L H+ + G+ L+ +LAI+D CP
Sbjct: 84 LGRSCPLLKSLKFSVGWFASRESDKMAFVIAETMPGLCHLDMKGHKLSELRVLAIIDKCP 143
Query: 61 HLESL 65
LESL
Sbjct: 144 LLESL 148
>Medtr8g006980.1 | F-box/LRR protein | LC | chr8:1153108-1152198 |
20130731
Length = 271
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MGKCCPHLQVLKF--NMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDG 58
+G+CCP L+ L + Y+ +D AFAIAKTM LRH++L G L + LLAILD
Sbjct: 165 IGRCCPRLKSLNLWRLIYPCVEYKYNDVAFAIAKTMSGLRHLKLSGIWLKSVELLAILDD 224
Query: 59 CPHLESL 65
CP LESL
Sbjct: 225 CPLLESL 231
>Medtr5g027890.1 | F-box/LRR protein | LC | chr5:11634854-11635769 |
20130731
Length = 263
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ C L+ L F+ + + D +A I++TM RLR + L GN LT+ GLLAIL+GCP
Sbjct: 161 LGRSCRLLKSLIFSREWNRPVADDGDALIISETMSRLRRLHLDGNRLTDIGLLAILNGCP 220
Query: 61 HLESL 65
LESL
Sbjct: 221 LLESL 225
>Medtr3g080360.1 | F-box/LRR protein | HC | chr3:36336952-36335849 |
20130731
Length = 285
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+ CP L+ L++N + D AF IA+TMP L H+ + G+ LT G+LAI+D CP
Sbjct: 182 LGRSCPLLKWLQYNSCSLDSCDSDKMAFLIAETMPGLCHLDMRGHKLTELGVLAIIDKCP 241
Query: 61 HLESL 65
LE L
Sbjct: 242 LLEYL 246
>Medtr5g036740.1 | F-box/LRR protein | LC | chr5:16053749-16052817 |
20130731
Length = 281
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 MGKCCPHLQVLKFN-MQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGC 59
+G+ CP L+ LK + + DD A IA TM L ++ + G++LTN+GLLAILD C
Sbjct: 162 LGRSCPLLKSLKISRLGVYAAKPSDDLALVIADTMTNLCYLDIKGDNLTNDGLLAILDKC 221
Query: 60 PHLESL 65
P LESL
Sbjct: 222 PFLESL 227
>Medtr5g098180.1 | ubiquitin-protein ligase | LC |
chr5:43004019-43003148 | 20130731
Length = 252
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 1 MGKCCPHLQVLKFNMQET----KGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAIL 56
+GK C L+V +NM T K +E D +A+AIA TM +L+ ++++ + +TNEG+L I+
Sbjct: 131 IGKNCKQLEVFCWNMHPTYTWGKPFE-DAKAYAIASTMSKLKRLEIVYHLITNEGVLKII 189
Query: 57 DGCPHLESL 65
CP LE L
Sbjct: 190 SSCPKLECL 198
>Medtr5g064480.1 | ubiquitin-protein ligase | HC |
chr5:27070427-27073110 | 20130731
Length = 316
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 1 MGKCCPHLQVLKFNMQ--ETKGYECDD-EAFAIAKTMPRLRHIQLLGNSLTNEGLLAILD 57
+GK HL+V NM ET G +D EA AIA TMP+L+ +++ N +T+EG+ IL
Sbjct: 151 IGKNLKHLEVFCRNMHPVETSGKPSEDAEALAIASTMPKLKRLEMAYNLVTSEGVYKILS 210
Query: 58 GCPHLESL 65
CP LE L
Sbjct: 211 SCPKLEIL 218
>Medtr5g064480.2 | ubiquitin-protein ligase | HC |
chr5:27070606-27073085 | 20130731
Length = 316
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 1 MGKCCPHLQVLKFNMQ--ETKGYECDD-EAFAIAKTMPRLRHIQLLGNSLTNEGLLAILD 57
+GK HL+V NM ET G +D EA AIA TMP+L+ +++ N +T+EG+ IL
Sbjct: 151 IGKNLKHLEVFCRNMHPVETSGKPSEDAEALAIASTMPKLKRLEMAYNLVTSEGVYKILS 210
Query: 58 GCPHLESL 65
CP LE L
Sbjct: 211 SCPKLEIL 218
>Medtr6g015890.1 | F-box/LRR protein | LC | chr6:5570201-5568006 |
20130731
Length = 303
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 MGKCCPHLQVLKF-NMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGC 59
+G+ CP L+ L+F + + DD I TM L + + GN LTN GLLAILDGC
Sbjct: 165 LGRSCPSLKSLQFAKARPSFMLGSDDTEALIIATMSTLTRLDIKGNMLTNAGLLAILDGC 224
Query: 60 PHLESL 65
P LESL
Sbjct: 225 PLLESL 230
>Medtr6g015900.1 | F-box/LRR protein | LC | chr6:5574580-5573648 |
20130731
Length = 280
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 MGKCCPHLQVLKF-NMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGC 59
+G+ CP L+ L+F + + DD I TM L + + GN LTN GLLAILDGC
Sbjct: 162 LGRSCPSLKSLQFAKARPSFMLGTDDTEALIIATMSTLTRLDIKGNMLTNAGLLAILDGC 221
Query: 60 PHLESL 65
P LESL
Sbjct: 222 PLLESL 227
>Medtr3g065790.1 | F-box/LRR protein | LC | chr3:29712876-29713532 |
20130731
Length = 176
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 1 MGKCCPHLQVL---------KFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEG 51
+G+ CP L+ L + N Y+ DD+AF IAKTM L H++L G G
Sbjct: 72 IGRSCPLLKSLNLENLFFIRRINAGLENSYDEDDKAFVIAKTMSGLCHLKLNGFFSNCGG 131
Query: 52 LLAILDGCPHLESL 65
L+AILDGCP LESL
Sbjct: 132 LVAILDGCPLLESL 145
>Medtr3g074900.1 | ubiquitin-protein ligase | HC |
chr3:33833221-33835627 | 20130731
Length = 316
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 1 MGKCCPHLQVLKFNMQ--ETKGYEC-DDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILD 57
+GK C L+ L NM +T G DDEA+AIA TMP+L+H+++ + ++ G++ IL
Sbjct: 151 IGKNCKLLEGLCRNMHPLDTAGKPLQDDEAYAIATTMPKLKHLEMAYHRISTSGVVQILS 210
Query: 58 GCPHLESL 65
CP LE L
Sbjct: 211 NCPKLEFL 218
>Medtr3g080310.1 | F-box/LRR protein | LC | chr3:36321437-36320558 |
20130731
Length = 258
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 1 MGKCCPHLQVLKFN-MQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGC 59
+G+ CP L++LK++ T+ + A AIA+TMP L H+ + G++L+ G+ AI+D C
Sbjct: 155 LGRSCPLLKLLKYHAWYPTRSCNPEKMALAIAETMPGLCHLDMKGHNLSELGVRAIIDKC 214
Query: 60 PHLESL 65
P LESL
Sbjct: 215 PVLESL 220
>Medtr3g065840.1 | F-box/LRR protein, putative | LC |
chr3:29726620-29727468 | 20130731
Length = 224
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILDGCP 60
+G+CCP L+ LK+++ + D +FAIAKTMPRL H+++ G+ ++G+ AILDGC
Sbjct: 100 VGRCCPLLKSLKYSLLPSDYIGQDVCSFAIAKTMPRLLHLKISGDMPGDDGIQAILDGCH 159
Query: 61 HLESL 65
LES
Sbjct: 160 LLESF 164
>Medtr5g062080.1 | F-box/LRR protein | LC | chr5:25784472-25783713 |
20130731
Length = 234
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 1 MGKCCPHLQVLKFNMQETKGYECDDE----AFAIAKTMPRLRHIQLLGNSLTNEGLLAIL 56
+G+ CP L+ LK+ + + D E AF++A+TM LR +++ N LT +G+LAIL
Sbjct: 99 VGQYCPLLKSLKYEKITDEDDDFDIEDEAFAFSVAETMSGLRRLKISSNVLTTDGVLAIL 158
Query: 57 DGCPHLESL 65
DGCP LE L
Sbjct: 159 DGCPLLECL 167